Tan0013973 (gene) Snake gourd v1

Overview


Name	Tan0013973
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	60S ribosomal protein L44
Location	LG04: 82286183 .. 82287279 (-)
RNA-Seq Expression	Tan0013973
Synteny	Tan0013973

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACTACACGACTTCTTCCAAATGCCGATTTCCATTTCCTCTGCTCCATTTTTGCTCTCCCATGGCGGAATCTTCTGACAAAATCTCTCCGTCCAAACGCCCACTCAATTTTTTCCTCCGTTGCTTCGGATCTTCCCCCGAATTTGAAACCCAAAAGAATCCGGCGACCGGCCGACGGGGGCGCCGGATTCCGTCGCTTAGGTTCCGATTCAAGAAGTCCTCTGCAACTGTGCCGGTTGACTCCGCCGTGCCGGAGATCACCGTGCCATGTGACGATAAAGCCTCTTTTTCGCCGGTGTTCAAGAAACCCCCTCCCCCGCCGTCGATTACGTCCAGAGCTCTGGCAGTCCCAGGAGAGATCGTCGAGTCGATAAAGCCAAGTCAAACTCGGAAGAAAACTGAGTCAACTCAGTCTAATTCCACGGCGGAGAGATTACCGCCGGCGAAAAGAACCGCCGCGTTGTCGCACACTGTCTCGCTTCCCTCCCGGCGATTAAACCGCCAAACAGACTTGAAAAAAACAGTCTCTCATCTCCCCTCCGCCGCCGCCGTCGCACCCACCTTGCCAAAGACCTCCGAGAAGACGCCGACGAATTCTCCGGCGAAGAAATTCGATCCGGTGATTGTGATTGTTGCGGTGGCGATTGTGGTGCTGTGGGGGCGACTCTGCGCCACACTCTGCACGGCGGCGCTGTTCTACCTCAGCCGGCGGTTGGGATCGGAAGTCGAACCAGACGGCGGCCGCGAGAGGCGAGTTTTGAATCGAGAAGGAACTGGTTTTGGGAAGATTTCTTGAGAGGTGTAGGCGAAGTATGTTCGTGAAAACGGTTACGGGAAATGGAAACCGCCAGTGAAGGGAGCTTGAAGAATATTTTAATGGCGGAAAAGTGACAGGTTGTTAATGCTAATTTTTGTAAATTAATGGCTAGTGGTAAGAGTTCAAACATTATTGTAACACTAATAATTTGACTAATATCTAATAACGAATAAGGGTCTGAAGACAATTATCTATTTTTCACGATTTATGTGTGTATATATATTTATTTAAATATCGAAAAATATATATTGCTGACATGACCAAAGCAAACTAGTGAATGG

mRNA sequence

CACTACACGACTTCTTCCAAATGCCGATTTCCATTTCCTCTGCTCCATTTTTGCTCTCCCATGGCGGAATCTTCTGACAAAATCTCTCCGTCCAAACGCCCACTCAATTTTTTCCTCCGTTGCTTCGGATCTTCCCCCGAATTTGAAACCCAAAAGAATCCGGCGACCGGCCGACGGGGGCGCCGGATTCCGTCGCTTAGGTTCCGATTCAAGAAGTCCTCTGCAACTGTGCCGGTTGACTCCGCCGTGCCGGAGATCACCGTGCCATGTGACGATAAAGCCTCTTTTTCGCCGGTGTTCAAGAAACCCCCTCCCCCGCCGTCGATTACGTCCAGAGCTCTGGCAGTCCCAGGAGAGATCGTCGAGTCGATAAAGCCAAGTCAAACTCGGAAGAAAACTGAGTCAACTCAGTCTAATTCCACGGCGGAGAGATTACCGCCGGCGAAAAGAACCGCCGCGTTGTCGCACACTGTCTCGCTTCCCTCCCGGCGATTAAACCGCCAAACAGACTTGAAAAAAACAGTCTCTCATCTCCCCTCCGCCGCCGCCGTCGCACCCACCTTGCCAAAGACCTCCGAGAAGACGCCGACGAATTCTCCGGCGAAGAAATTCGATCCGGTGATTGTGATTGTTGCGGTGGCGATTGTGGTGCTGTGGGGGCGACTCTGCGCCACACTCTGCACGGCGGCGCTGTTCTACCTCAGCCGGCGGTTGGGATCGGAAGTCGAACCAGACGGCGGCCGCGAGAGGCGAGTTTTGAATCGAGAAGGAACTGGTTTTGGGAAGATTTCTTGAGAGGTGTAGGCGAAGTATGTTCGTGAAAACGGTTACGGGAAATGGAAACCGCCAGTGAAGGGAGCTTGAAGAATATTTTAATGGCGGAAAAGTGACAGGTTGTTAATGCTAATTTTTGTAAATTAATGGCTAGTGGTAAGAGTTCAAACATTATTGTAACACTAATAATTTGACTAATATCTAATAACGAATAAGGGTCTGAAGACAATTATCTATTTTTCACGATTTATGTGTGTATATATATTTATTTAAATATCGAAAAATATATATTGCTGACATGACCAAAGCAAACTAGTGAATGG

Coding sequence (CDS)

ATGGCGGAATCTTCTGACAAAATCTCTCCGTCCAAACGCCCACTCAATTTTTTCCTCCGTTGCTTCGGATCTTCCCCCGAATTTGAAACCCAAAAGAATCCGGCGACCGGCCGACGGGGGCGCCGGATTCCGTCGCTTAGGTTCCGATTCAAGAAGTCCTCTGCAACTGTGCCGGTTGACTCCGCCGTGCCGGAGATCACCGTGCCATGTGACGATAAAGCCTCTTTTTCGCCGGTGTTCAAGAAACCCCCTCCCCCGCCGTCGATTACGTCCAGAGCTCTGGCAGTCCCAGGAGAGATCGTCGAGTCGATAAAGCCAAGTCAAACTCGGAAGAAAACTGAGTCAACTCAGTCTAATTCCACGGCGGAGAGATTACCGCCGGCGAAAAGAACCGCCGCGTTGTCGCACACTGTCTCGCTTCCCTCCCGGCGATTAAACCGCCAAACAGACTTGAAAAAAACAGTCTCTCATCTCCCCTCCGCCGCCGCCGTCGCACCCACCTTGCCAAAGACCTCCGAGAAGACGCCGACGAATTCTCCGGCGAAGAAATTCGATCCGGTGATTGTGATTGTTGCGGTGGCGATTGTGGTGCTGTGGGGGCGACTCTGCGCCACACTCTGCACGGCGGCGCTGTTCTACCTCAGCCGGCGGTTGGGATCGGAAGTCGAACCAGACGGCGGCCGCGAGAGGCGAGTTTTGAATCGAGAAGGAACTGGTTTTGGGAAGATTTCTTGA

Protein sequence

MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVDSAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEIVESIKPSQTRKKTESTQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVSHLPSAAAVAPTLPKTSEKTPTNSPAKKFDPVIVIVAVAIVVLWGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNREGTGFGKIS

Homology

[Close]

BLAST of Tan0013973 vs. NCBI nr
Match: KAG6606901.1 (60S ribosomal protein L44, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 310.1 bits (793), Expect = 1.7e-80
Identity = 172/246 (69.92%), Postives = 194/246 (78.86%), Query Frame = 0


Query: 1   MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVD 60
           MAE+S+K+SPSKRPL+F LRCFGSSP+ +T+KNP TGR   RIPS RFRFKKSSATVP+D
Sbjct: 1   MAEASEKMSPSKRPLHFLLRCFGSSPKVQTKKNPTTGRWDSRIPSPRFRFKKSSATVPID 60

Query: 61  SAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEIVESIKPSQTRKKTESTQSNS 120
            AVPEITVPCDDKASFSP FKKPPP P I SRA  V  +IVE IKPSQT KKTEST+ +S
Sbjct: 61  VAVPEITVPCDDKASFSPEFKKPPPSPLIKSRAPTVRTKIVELIKPSQTWKKTESTRYDS 120

Query: 121 TAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVSHLPSAAAVAPTLP---KTSEKTPT 180
               L PAKRTAAL H++SLPSRRLNRQ DLKKTVSHL +     PT     K ++K P 
Sbjct: 121 ----LTPAKRTAALLHSISLPSRRLNRQKDLKKTVSHLSAVKTPTPTSSERRKPADKAPM 180

Query: 181 NSPAKKFDPVIVIVAVAIVVLWGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNREG 240
           NSPAK  D +IVIVAVAIVVLWG+LCA LCT ALFY  RRL SE E +GG E RVLNR+G
Sbjct: 181 NSPAKILDLIIVIVAVAIVVLWGQLCAILCTTALFYFCRRLRSETESEGGGEMRVLNRKG 240

Query: 241 TGFGKI 244
           +GFGK+
Sbjct: 241 SGFGKV 242

[Close]

BLAST of Tan0013973 vs. NCBI nr
Match: XP_022949237.1 (uncharacterized protein LOC111452650 [Cucurbita moschata])

HSP 1 Score: 306.6 bits (784), Expect = 1.9e-79
Identity = 171/247 (69.23%), Postives = 193/247 (78.14%), Query Frame = 0


Query: 1   MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVD 60
           MAE+S+K+SPSKRPL+F LRCFGSSP+ +T+KNP TGRR  RIPS RFRFKKSSATVP+D
Sbjct: 1   MAEASEKMSPSKRPLHFLLRCFGSSPKVQTKKNPTTGRRDSRIPSPRFRFKKSSATVPID 60

Query: 61  SAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEIVESIKPSQTRKKTESTQSNS 120
            AVPEITVPCDDKASFSP FKKPPP P I SRA  V  +IVE IKPSQ  KKTEST+S  
Sbjct: 61  VAVPEITVPCDDKASFSPEFKKPPPSPLIKSRAPTVRTKIVELIKPSQPWKKTESTRS-- 120

Query: 121 TAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVSHLPSAAAVAPTLP---KTSEKTPT 180
             + L PAKRTAAL H++SLPSRRLNRQ D KKTVSHL +     PT     K ++K P 
Sbjct: 121 --DFLTPAKRTAALLHSISLPSRRLNRQKDFKKTVSHLSAVKTPTPTSSERRKPADKPPM 180

Query: 181 NSPAKKFDPVIVIVAVAIVVLWGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNREG 240
           NSPAK  D +IVIVAVAIVVLWG+LCA LCT ALFY  RRL SE E +GG E RVLNR+G
Sbjct: 181 NSPAKILDLIIVIVAVAIVVLWGQLCAILCTTALFYFCRRLRSETELEGGGEMRVLNRKG 240

Query: 241 TGFGKIS 245
           +GF K+S
Sbjct: 241 SGFRKVS 243

[Close]

BLAST of Tan0013973 vs. NCBI nr
Match: KGN58547.1 (hypothetical protein Csa_002056 [Cucumis sativus])

HSP 1 Score: 212.2 bits (539), Expect = 4.9e-51
Identity = 137/253 (54.15%), Postives = 163/253 (64.43%), Query Frame = 0


Query: 1   MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVD 60
           MA+SS+ I PSK PL+F   CF SS +  T+K  +   R RR  S  FRFKKSSATVPVD
Sbjct: 1   MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60

Query: 61  SAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEIV--ESIKPSQTRKKTESTQS 120
                +  P  D+ SF P FKK PP   I  +A  V GEIV   S+KPSQTRKK  STQS
Sbjct: 61  -----VADPSHDELSFLPEFKKSPPLSFIMPKAPQVGGEIVVDSSLKPSQTRKKPHSTQS 120

Query: 121 NSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVS-HLPSAAAVAPTLP------KT 180
           N T ++L P ++TAAL H+VSLPS++L RQ   KK VS HLP  AAVA T P      K 
Sbjct: 121 NFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLP--AAVATTSPAFSDGNKP 180

Query: 181 SEKTPTNSPAKKFDPVIVIVAVAIVVLWGRLCATLCTAALFYLSRRLGSEVEPDGGRERR 240
           + K PT  P K FD VI++V VAIV+LWGRLCA LCT ALFYL RR+ SE+EPDGG    
Sbjct: 181 TPKLPTYYPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGG---- 237

Query: 241 VLNREGTGFGKIS 245
                G+G G++S
Sbjct: 241 -----GSGRGRLS 237

[Close]

BLAST of Tan0013973 vs. NCBI nr
Match: KAA0052773.1 (60S ribosomal protein L44 [Cucumis melo var. makuwa] >TYK04183.1 60S ribosomal protein L44 [Cucumis melo var. makuwa])

HSP 1 Score: 204.1 bits (518), Expect = 1.3e-48
Identity = 132/242 (54.55%), Postives = 154/242 (63.64%), Query Frame = 0


Query: 1   MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVD 60
           MA+SS K  PSK P  F   CF SS +   +K  +   R RR  SL FRFKKSSATVPVD
Sbjct: 1   MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVD 60

Query: 61  SAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEIV-----ESIKPSQTRKKTES 120
                +  P  D+ SFSP FKKPPP   IT +A  V GEIV     ES+KPSQTRKK ES
Sbjct: 61  -----VAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSGYESLKPSQTRKKPES 120

Query: 121 TQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVS-HLPSAAAVAPTLP----- 180
           TQSN T ++L P ++ AA  H+VS PS+ L RQ D K++VS HLP  AAVA T P     
Sbjct: 121 TQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLP--AAVATTSPAFSDG 180

Query: 181 -KTSEKTPTNSPAKKFDPVIVIVAVAIVVLWGRLCATLCTAALFYLSRRLGSEVEPDGGR 231
            K + K  TN P K  D VI++V VAI+VLWGRLCA LCT ALFYL RR+ SE+E  GG 
Sbjct: 181 NKPTPKLATNYPVKNLDRVIMVVMVAIMVLWGRLCAILCTTALFYLGRRMRSEMEVGGGG 235

[Close]

BLAST of Tan0013973 vs. NCBI nr
Match: XP_022982640.1 (uncharacterized protein LOC111481455 [Cucurbita maxima] >XP_022982641.1 uncharacterized protein LOC111481455 [Cucurbita maxima])

HSP 1 Score: 193.0 bits (489), Expect = 3.1e-45
Identity = 132/248 (53.23%), Postives = 151/248 (60.89%), Query Frame = 0


Query: 1   MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVD 60
           MAESSD     K  L+F  RCF SSP  + QK        RR PSLRFRFKK SATVP+D
Sbjct: 1   MAESSD-----KPRLHFLFRCFRSSPNVQRQKAQQIASPNRRTPSLRFRFKKCSATVPLD 60

Query: 61  SAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEIVESIKPSQTRKKTESTQSNS 120
           +A     VPC D+ SFSP F  PPPP  I    +   G   ++IK S+TRKK+ESTQSN 
Sbjct: 61  AA-----VPCHDELSFSPEFNTPPPPSPIKGEIIVDSG--CKTIKQSKTRKKSESTQSNP 120

Query: 121 TAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVSHLPSAAAVA-PTLPKTSE---KTP 180
           T E+LPPAK+T          S  L+ +  LKK++SHLP A A A PT    S    K P
Sbjct: 121 TVEKLPPAKKT----------SPSLHSEKGLKKSISHLPIAVADADPTTSLASSDSWKAP 180

Query: 181 TNSPAKKFDPVIVIVAVAIVVLWGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNRE 240
           TNSP  KFD V VIVAVAIVVLWGRLCA LCTAALFYL R L S+ E D      V+   
Sbjct: 181 TNSPTIKFDLVTVIVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELD------VVVDG 220

Query: 241 GTGFGKIS 245
           G  FGK+S
Sbjct: 241 GGAFGKVS 220

[Close]

BLAST of Tan0013973 vs. ExPASy TrEMBL
Match: A0A6J1GBH7 (uncharacterized protein LOC111452650 OS=Cucurbita moschata OX=3662 GN=LOC111452650 PE=4 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 9.3e-80
Identity = 171/247 (69.23%), Postives = 193/247 (78.14%), Query Frame = 0


Query: 1   MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVD 60
           MAE+S+K+SPSKRPL+F LRCFGSSP+ +T+KNP TGRR  RIPS RFRFKKSSATVP+D
Sbjct: 1   MAEASEKMSPSKRPLHFLLRCFGSSPKVQTKKNPTTGRRDSRIPSPRFRFKKSSATVPID 60

Query: 61  SAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEIVESIKPSQTRKKTESTQSNS 120
            AVPEITVPCDDKASFSP FKKPPP P I SRA  V  +IVE IKPSQ  KKTEST+S  
Sbjct: 61  VAVPEITVPCDDKASFSPEFKKPPPSPLIKSRAPTVRTKIVELIKPSQPWKKTESTRS-- 120

Query: 121 TAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVSHLPSAAAVAPTLP---KTSEKTPT 180
             + L PAKRTAAL H++SLPSRRLNRQ D KKTVSHL +     PT     K ++K P 
Sbjct: 121 --DFLTPAKRTAALLHSISLPSRRLNRQKDFKKTVSHLSAVKTPTPTSSERRKPADKPPM 180

Query: 181 NSPAKKFDPVIVIVAVAIVVLWGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNREG 240
           NSPAK  D +IVIVAVAIVVLWG+LCA LCT ALFY  RRL SE E +GG E RVLNR+G
Sbjct: 181 NSPAKILDLIIVIVAVAIVVLWGQLCAILCTTALFYFCRRLRSETELEGGGEMRVLNRKG 240

Query: 241 TGFGKIS 245
           +GF K+S
Sbjct: 241 SGFRKVS 243

[Close]

BLAST of Tan0013973 vs. ExPASy TrEMBL
Match: A0A0A0LCZ2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G680630 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 2.4e-51
Identity = 137/253 (54.15%), Postives = 163/253 (64.43%), Query Frame = 0


Query: 1   MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVD 60
           MA+SS+ I PSK PL+F   CF SS +  T+K  +   R RR  S  FRFKKSSATVPVD
Sbjct: 1   MADSSENIPPSKSPLHFLFSCFRSSSKLPTKKASSIAPRIRRTSSRTFRFKKSSATVPVD 60

Query: 61  SAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEIV--ESIKPSQTRKKTESTQS 120
                +  P  D+ SF P FKK PP   I  +A  V GEIV   S+KPSQTRKK  STQS
Sbjct: 61  -----VADPSHDELSFLPEFKKSPPLSFIMPKAPQVGGEIVVDSSLKPSQTRKKPHSTQS 120

Query: 121 NSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVS-HLPSAAAVAPTLP------KT 180
           N T ++L P ++TAAL H+VSLPS++L RQ   KK VS HLP  AAVA T P      K 
Sbjct: 121 NFTTKKLSPTRKTAALLHSVSLPSQQLTRQKYFKKPVSGHLP--AAVATTSPAFSDGNKP 180

Query: 181 SEKTPTNSPAKKFDPVIVIVAVAIVVLWGRLCATLCTAALFYLSRRLGSEVEPDGGRERR 240
           + K PT  P K FD VI++V VAIV+LWGRLCA LCT ALFYL RR+ SE+EPDGG    
Sbjct: 181 TPKLPTYYPVKNFDRVIMVVIVAIVMLWGRLCAILCTTALFYLGRRMRSEIEPDGG---- 237

Query: 241 VLNREGTGFGKIS 245
                G+G G++S
Sbjct: 241 -----GSGRGRLS 237

[Close]

BLAST of Tan0013973 vs. ExPASy TrEMBL
Match: A0A5A7UA28 (60S ribosomal protein L44 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1856G00090 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 6.5e-49
Identity = 132/242 (54.55%), Postives = 154/242 (63.64%), Query Frame = 0


Query: 1   MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVD 60
           MA+SS K  PSK P  F   CF SS +   +K  +   R RR  SL FRFKKSSATVPVD
Sbjct: 1   MADSSQKNPPSKSPFRFLFTCFRSSSKLPAKKPSSIAPRNRRTFSLTFRFKKSSATVPVD 60

Query: 61  SAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEIV-----ESIKPSQTRKKTES 120
                +  P  D+ SFSP FKKPPP   IT +A  V GEIV     ES+KPSQTRKK ES
Sbjct: 61  -----VAYPSHDELSFSPDFKKPPPLSLITPKAPQVVGEIVVDSGYESLKPSQTRKKPES 120

Query: 121 TQSNSTAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVS-HLPSAAAVAPTLP----- 180
           TQSN T ++L P ++ AA  H+VS PS+ L RQ D K++VS HLP  AAVA T P     
Sbjct: 121 TQSNFTTKKLSPTRKIAASLHSVSPPSQLLTRQKDFKRSVSEHLP--AAVATTSPAFSDG 180

Query: 181 -KTSEKTPTNSPAKKFDPVIVIVAVAIVVLWGRLCATLCTAALFYLSRRLGSEVEPDGGR 231
            K + K  TN P K  D VI++V VAI+VLWGRLCA LCT ALFYL RR+ SE+E  GG 
Sbjct: 181 NKPTPKLATNYPVKNLDRVIMVVMVAIMVLWGRLCAILCTTALFYLGRRMRSEMEVGGGG 235

[Close]

BLAST of Tan0013973 vs. ExPASy TrEMBL
Match: A0A6J1IZW6 (uncharacterized protein LOC111481455 OS=Cucurbita maxima OX=3661 GN=LOC111481455 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 1.5e-45
Identity = 132/248 (53.23%), Postives = 151/248 (60.89%), Query Frame = 0


Query: 1   MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVD 60
           MAESSD     K  L+F  RCF SSP  + QK        RR PSLRFRFKK SATVP+D
Sbjct: 1   MAESSD-----KPRLHFLFRCFRSSPNVQRQKAQQIASPNRRTPSLRFRFKKCSATVPLD 60

Query: 61  SAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEIVESIKPSQTRKKTESTQSNS 120
           +A     VPC D+ SFSP F  PPPP  I    +   G   ++IK S+TRKK+ESTQSN 
Sbjct: 61  AA-----VPCHDELSFSPEFNTPPPPSPIKGEIIVDSG--CKTIKQSKTRKKSESTQSNP 120

Query: 121 TAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVSHLPSAAAVA-PTLPKTSE---KTP 180
           T E+LPPAK+T          S  L+ +  LKK++SHLP A A A PT    S    K P
Sbjct: 121 TVEKLPPAKKT----------SPSLHSEKGLKKSISHLPIAVADADPTTSLASSDSWKAP 180

Query: 181 TNSPAKKFDPVIVIVAVAIVVLWGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNRE 240
           TNSP  KFD V VIVAVAIVVLWGRLCA LCTAALFYL R L S+ E D      V+   
Sbjct: 181 TNSPTIKFDLVTVIVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELD------VVVDG 220

Query: 241 GTGFGKIS 245
           G  FGK+S
Sbjct: 241 GGAFGKVS 220

[Close]

BLAST of Tan0013973 vs. ExPASy TrEMBL
Match: A0A6J1F3C2 (uncharacterized protein LOC111441760 OS=Cucurbita moschata OX=3662 GN=LOC111441760 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 1.9e-45
Identity = 130/246 (52.85%), Postives = 153/246 (62.20%), Query Frame = 0


Query: 1   MAESSDKISPSKRPLNFFLRCFGSSPEFETQKNPATGRRGRRIPSLRFRFKKSSATVPVD 60
           MAESSD     K  L+F  RCF SSP  + QK        RR PSLRFRFKKSSATVP+D
Sbjct: 1   MAESSD-----KPRLHFLFRCFRSSPNVQRQKAHPIASPNRRTPSLRFRFKKSSATVPLD 60

Query: 61  SAVPEITVPCDDKASFSPVFKKPPPPPSITSRALAVPGEIVESIKPSQTRKKTESTQSNS 120
           +A     VPC D+ S SP F  PPPPP I    +   G   ++IKPS+TRKK+ESTQSN 
Sbjct: 61  AA-----VPCHDELSLSPEFNTPPPPPLIKGEIIVDSG--CKTIKPSKTRKKSESTQSN- 120

Query: 121 TAERLPPAKRTAALSHTVSLPSRRLNRQTDLKKTVSHLPSAAAVAPT-LPKTSE-KTPTN 180
                P ++ T + S      S  L+ +  LKK++SHLP+AAA   T LP +   K PTN
Sbjct: 121 -----PKSESTQSNSTAEKKTSPSLHSEKGLKKSISHLPTAAAALTTSLPSSDRWKPPTN 180

Query: 181 SPAKKFDPVIVIVAVAIVVLWGRLCATLCTAALFYLSRRLGSEVEPDGGRERRVLNREGT 240
           SP KKFD VIVIVAVAIVVLWGRLCA LCTAALFYL R L S+ E D      V+   G 
Sbjct: 181 SPNKKFDLVIVIVAVAIVVLWGRLCAILCTAALFYLRRCLRSKAELD------VVIHGGG 222

Query: 241 GFGKIS 245
            FG++S
Sbjct: 241 AFGRVS 222

The following BLAST results are available for this feature:

BLAST of Tan0013973 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0013973 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6606901.1	1.7e-80	69.92	60S ribosomal protein L44, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022949237.1	1.9e-79	69.23	uncharacterized protein LOC111452650 [Cucurbita moschata]	[more]
KGN58547.1	4.9e-51	54.15	hypothetical protein Csa_002056 [Cucumis sativus]	[more]
KAA0052773.1	1.3e-48	54.55	60S ribosomal protein L44 [Cucumis melo var. makuwa] >TYK04183.1 60S ribosomal p...	[more]
XP_022982640.1	3.1e-45	53.23	uncharacterized protein LOC111481455 [Cucurbita maxima] >XP_022982641.1 uncharac...	[more]

BLAST of Tan0013973 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GBH7	9.3e-80	69.23	uncharacterized protein LOC111452650 OS=Cucurbita moschata OX=3662 GN=LOC1114526...	[more]
A0A0A0LCZ2	2.4e-51	54.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G680630 PE=4 SV=1	[more]
A0A5A7UA28	6.5e-49	54.55	60S ribosomal protein L44 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A6J1IZW6	1.5e-45	53.23	uncharacterized protein LOC111481455 OS=Cucurbita maxima OX=3661 GN=LOC111481455...	[more]
A0A6J1F3C2	1.9e-45	52.85	uncharacterized protein LOC111441760 OS=Cucurbita moschata OX=3662 GN=LOC1114417...	[more]

BLAST of Tan0013973 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..125
None	No IPR available	PANTHER	PTHR34379:SF3	PROTEIN, PUTATIVE-RELATED	coord: 1..229
IPR040411	Uncharacterized protein At5g23160-like	PANTHER	PTHR34379	OS07G0553800 PROTEIN	coord: 1..229

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013973.1	Tan0013973.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane