Tan0013971 (gene) Snake gourd v1

Overview
NameTan0013971
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionglycine-rich RNA-binding protein GRP1A-like
LocationLG04: 6142037 .. 6146953 (+)
RNA-Seq ExpressionTan0013971
SyntenyTan0013971
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCGTAATTTTGTACTGTTTGACGTAGGAGAAAACTGTAAAAGTATGTCAAATTCGATTCTAATGGTTATTAGAGTGTGCATGGATATATTTTTTAATCTATATTCAATAGTTAATTGAGAGACAACCTAATAACTTTTTCCGTAGTATAAATACTCTTCTATTTATTATCAAGCCACATCAATATCATTTAAGACTTAAGAGTGGTGTGAAGTCTAACAAAATTAAAGCATTAACTAATAATAAAACAAAAGTTTAAATACTATTTTGGTCTTTGTACTTTCAAAATAATTGTTTTCGCCCCTATAGTTTTAAAAAGTGACCATAGTTTTAAAAAGTGACCAATTTAGTTCTCTTTGCAAAATTTAAGCATAAATTTATACACAATGGAAACCTTTTCATATAAAATTATGACTACATTTCAAGAATTTTAGTAGGTGAAGTATCATGGTAAAATATTGATCGAAAAAAATGAAGGGACAAAAATAAAATTTTTGAAACTACAAGGACCAAAATGAAATGAATAGAAACTAAAAGTATAAGACCAAAATGAACAAAAACAAAATTTATAGTGTGGACGGAGAGAATGTATTATGAGAATACTAAAAATTCATCATAATATGATGATAAATTATTCAATGAGGCCACTCTTAATAACCGTTAAATATAAATTCGAAAACTTTCATGCCACTTAATACTTTTCCAGTTTTTCTTCCCTATATACAACCATACAAAATTATGCATATACAACTATACAAAATTGTCTACTATAATATACCAGTCTCCTCACCTAGACAGTTTTGATTACCATCAAACAACAGTAAATCAGTATGATAGTGGGAAACCGTGTGTAATGGTCTTAAACAGTTTTTTTTTTTTTTTAAAAAAAAGATTCGAGTTCGTGTTTCTTTTTAAAAGGATGTCTCTTTACTTATTCTAAACCCTCAAAAGAGATAAGATCGCTTAAGTCTTCGTCTTCCCCACTCACCCACCGTTTAGTATAAATAAACCAGAGCATTAATCTAATAACCACATAGAGAGATCTAGAAGAGAGAAGCTATATGTACGAAAATGGGAAGAAGAGAGATGGGATTGATTTTCATACTGTTTTGTTCTACCATGACCACTGCATCTTCTCTGCAAGAAATCTTGCCAACAGGTCAGTCACAGTCAGTATTCCTTTCTGATCTCTCAGGGAAATTCTCACCCTATTTTTCTCTATGTTCTTCTTCTTCAACCCCATGGTCTAATCACAAATTTTCTTTATATGTTCATATGTTTGGGCCACAAAATTTCCAATTGAATCAAAAAACTCTAAAACAACAAGAAATCATTGCTTGGTATCTAGTTCCAAATGGAAGTCTGGTCTCTGCTCATGATAAAAAGATCATATGTTATTTTGGGGTTTTGCTATTCCTACCCGTTTGTTTTTACTCTCTTTAAAATTTCTTCAAAGATGTTAAAGGAACTTAACAATTGTTAGGTAAAAAGTAAGATAAGGAAATAAAGTATACACGACAAAGATGAATAATGAAACCGACAAAGAACTGATATAAAGTGTGCATTCCAGATAATGTGTGTGTGTGTGTGTATAAACGACAAATTTGGATGATTGAAAATCTGTATAGAATAGTAATGTGAAAGAGAGAATAAAAAGATAAACACATAAGAATATAGGTGATTAAAGAGGGCAGGTTATTATGTCTTTTAATGTCAAATGGAAATAAATATTAAAAAATTAAATTAAATAAAGTTTAATACCTTGTAGATGGGGGCCCTAACAATGTGGTTTTTCCACTAACTTTAGCTTTTGGGAGTTCATATGCTGCTATTGACTGAAGTGATCAAATAACCAGCCAGTCTAATTAGTCAAGATATTCATAATCTCTATTTTATTTAAATGGTATTATTAAATAAAAACAAAGTGACAAATGATTAAGTTTTCATTTATTATATGATATAGGATGCTTATAAGTTATATATATGTTTGGTTGTAATAATTTTATGTTTCTTAGAAGTGTTTTCCCTTTTTATAGTTCAAAAACTTGTTCAATAAGCTCTCCCTATTCCTACTTTTTATACTCCGTATTTAATTAGAGAATGTACTCCATTAATATTAAAAACGTACTTTTAAACTGCTTGGCTAGAAAAGGATAAAAAGGATTTCGAAAGAGAAAAATATAGCGACTATTTTTTTAAAAGAAAAAACAAGTCTTAAGATTTATATATGATTTTTACCGCCAAAGAGCATATCTCAACTGACATCTCGAATCTATTAACGACCATCAAGTCTATGGTTTGAATCCCCCAACTCCTTATTGTACTAAAAAAGGACAATTTTTACCTCATAAAACTTTATATTTTTCGTTGAATATCAGAAAATTAAACATAAGTACAATTTTTTAAAACAGGTTATTTAAGTTACAAAGTTTTATTGTTCTAAATTATAATAAAGGGAAATAGGATGAGGCACCTGTTACTATATCATAAATAACACATTCAACATAAAAAATGAAAGGAAAAAAAATAATAATAATAAAATCAAATCGAGAAAGCAATTAAAAATGAATTTGGGCGAAAATTGTCTTATTTATGGAACTTATAAAATGGAAATTTTGGTATCTCACTAGTGCATGCCATGGATGGTAAATTCCTTCTTTACCCACCCTAAAAGGAAAAAGTTGAATATCATTTTTGGACAGGGTCTATTTTAATCTTTACACTTCTAAACGTTCCGAATGTCCAGATTTATTACTTGTACTTTCCATTATTCTTAATTCTTAAAATTATTGCTAGTTTATGGTTAACTTCTAAACAAAAGTTAGTCTCTATTAACATATTTTCTTAAACGGTTCTCTATTAATCTTTCCGTTATAAATTTTAGAAATATATTCATTATGTGCCTTTTCTTCATTGATAGTTATTATTATTATTATTTTACTAATTTTAATAAAAATTAGCTTCAAACTAACAAATAATTTGAAATTTAAAAAATGTATAAGAACTAAAATAACATAGACTAATGGAACGAGCCCCAAAATATAGGGACTAAGATGGTATTCTAACCAAAAAGTAACCCTAAACAAAGGTCATCAAAGGAACTCGCCCTGAAATTTCTATTGTCAGTTTGTTTGTTTTTTTCTGTTGTGTAAGCCTTTTTTATTCTATTTCCTTTTATTTTTATAATGTAGATTGTAGAACTTTAAAAAAATGAAGGATACTTTTTTATTTTATCGCTTCTTTTCTACCTTTGTCATTGTTCCGTGGAGATGGGAGAGTTTTTTTTTTTTTGGAAGATAAGTGGTTAGGGGATAGACTCCTATGCTCCGTGTTTCCTCGCCTTTACCATTTATCTTCTATGAAGAGTCATTCAGGTGGCTGATGTTTTGTCTCATCTTGAGTCTTGTCCCTCGCCTTCATTGGGTTTTCACATCCCTTATCCGATAGGGAGAGAGTGGATGTCATGACCTCCTTTCTTTGTTGGGAGAGTTTTGTTATGCTTCGAGAATGAGGGATGTTTGTTGTTGGAGCCTTAGTCAATCTACTGGCTTTTCGTGTAGGTCCTTTTTCTTTGCCTTTTTAATCTCTCTCTTCCCTTTTCCCTGTAGATTCTGTCTTTACCTCATTATGGAAGGTGAAAATCCCAAACAAGGTTAAGTCTTTTGTTCGGCAGGTCTTGTACGGAAGAATTAATACCTTAGTTAGGGTGGTGAGAAAGATGCCTTCCTTAGTGGAGCCGCGGTGTTGCATTCTTTATAGGAAGGTTGCTGAGGATATTGATCATGTGCTTTGGAATTGTGAGTTGGCTTATGATATGTGGAGTTGTTTCTTGGTGGAGTTTGGCTTTGTTATCCCTAGACAGAGGAATTGTCGTGAGATGATATAGGAGTTCATCTGTTATCCTTTTTTTCAGGAGAGGAACGTTTTTGTGGCAAGCTGGGATGTGTGTTATTTTGTAGGGGCTTTGGAGTGGGAGAAACAACAGAATTTTTCATGAGGTTGAGAGATCTCCTTGTGATTTGTGGTCCCTTATTAGATTCTATGTTTGTTTTTGGGTTTCAGTGATTAAACCTTTTTGAAATTATACGCTAGGTCTTATTTTGCTTGACTGGAGGCCTTCCTGGTAGGTCGCCTCCTTTTTTTGTCAGCTCTTCTTTTTGGATGCCTTGTATTCTTGTTTATTCTTAAAAAAAATAAATAAAAATAAAAAAATGAAGTGAAAAAAAAAAAGGAATAAAATGAAATTTATTATATCCCCATTCCTAAACCAGTTTCTATATGTACGCAGAGTCTAATTACCACCAGAAACCTAACGCAGGAAAACATGGCCAAGATGGGGTTACTAACCAGATTGGCAGAAGATACGGTGCAAATGCAATCACCGTTTCTCATGGGGTTGGTCATGGAAATGCTGCCAGCGGAGGCGGCGGAGATGGTGGTGGCAGTAGACCAAATACAGGAGGAGGAGGTACCGCCGTAATCCCTATTTATGCAGCTGGTTCGGCACAAGCACGTCACCGCCAGGGTCGACCGCGCAATGCTGGAAATCGCCATGAGAACAACATGGCGCTTCTGGTAGCTGCAGTTTTGGCTGCCATTGCGCATCTGTACAGAGTTTTCTAACATCGAGGCGGCCTCCATCGGGACCATCCAGGAAAGAGCTGTAATGTGTTGAACCAATTCGAAACCATCACTAGCAAATAAATACAGCTGGGTTGGTTATGAAGAGGAAAAATAACCGAAGGCTCTCGAATCTGTTGAAAGCTGCTAAAGCAATCAAATCAGTTGTAATTTCTTGTACACTACTTGTTACCTTCGATCAAGATCTTCCAATTTGGAATCTTCTCCTGATCCTTTAATAATAATAAAAATATTCTGCCATGGTCCCTTCACGGTGGATGTAAGAAATCTTTGCTGAA

mRNA sequence

CCGTAATTTTGTACTGTTTGACGTAGGAGAAAACTGTAAAAGTATGTCAAATTCGATTCTAATGGTTATTAGAGTGTGCATGGATATATTTTTTAATCTATATTCAATAGTTAATTGAGAGACAACCTAATAACTTTTTCCGTAGTATAAATACTCTTCTATTTATTATCAAGCCACATCAATATCATTTAAGACTTAAGAGTGGTGTGAAGTCTAACAAAATTAAAGCATTAACTAATAATAAAACAAAAGTTTAAATACTATTTTGGTCTTTGTACTTTCAAAATAATTGTTTTCGCCCCTATAGTTTTAAAAAGTGACCATAGTTTTAAAAAGTGACCAATTTAGTTCTCTTTGCAAAATTTAAGCATAAATTTATACACAATGGAAACCTTTTCATATAAAATTATGACTACATTTCAAGAATTTTAGTAGGTGAAGTATCATGGTAAAATATTGATCGAAAAAAATGAAGGGACAAAAATAAAATTTTTGAAACTACAAGGACCAAAATGAAATGAATAGAAACTAAAAGTATAAGACCAAAATGAACAAAAACAAAATTTATAGTGTGGACGGAGAGAATGTATTATGAGAATACTAAAAATTCATCATAATATGATGATAAATTATTCAATGAGGCCACTCTTAATAACCGTTAAATATAAATTCGAAAACTTTCATGCCACTTAATACTTTTCCAGTTTTTCTTCCCTATATACAACCATACAAAATTATGCATATACAACTATACAAAATTGTCTACTATAATATACCAGTCTCCTCACCTAGACAGTTTTGATTACCATCAAACAACAGTAAATCAGTATGATAGTGGGAAACCGTGTGTAATGGTCTTAAACAGTTTTTTTTTTTTTTTAAAAAAAAGATTCGAGTTCGTGTTTCTTTTTAAAAGGATGTCTCTTTACTTATTCTAAACCCTCAAAAGAGATAAGATCGCTTAAGTCTTCGTCTTCCCCACTCACCCACCGTTTAGTATAAATAAACCAGAGCATTAATCTAATAACCACATAGAGAGATCTAGAAGAGAGAAGCTATATGTACGAAAATGGGAAGAAGAGAGATGGGATTGATTTTCATACTGTTTTGTTCTACCATGACCACTGCATCTTCTCTGCAAGAAATCTTGCCAACAGAGTCTAATTACCACCAGAAACCTAACGCAGGAAAACATGGCCAAGATGGGGTTACTAACCAGATTGGCAGAAGATACGGTGCAAATGCAATCACCGTTTCTCATGGGGTTGGTCATGGAAATGCTGCCAGCGGAGGCGGCGGAGATGGTGGTGGCAGTAGACCAAATACAGGAGGAGGAGGTACCGCCGTAATCCCTATTTATGCAGCTGGTTCGGCACAAGCACGTCACCGCCAGGGTCGACCGCGCAATGCTGGAAATCGCCATGAGAACAACATGGCGCTTCTGGTAGCTGCAGTTTTGGCTGCCATTGCGCATCTGTACAGAGTTTTCTAACATCGAGGCGGCCTCCATCGGGACCATCCAGGAAAGAGCTGTAATGTGTTGAACCAATTCGAAACCATCACTAGCAAATAAATACAGCTGGGTTGGTTATGAAGAGGAAAAATAACCGAAGGCTCTCGAATCTGTTGAAAGCTGCTAAAGCAATCAAATCAGTTGTAATTTCTTGTACACTACTTGTTACCTTCGATCAAGATCTTCCAATTTGGAATCTTCTCCTGATCCTTTAATAATAATAAAAATATTCTGCCATGGTCCCTTCACGGTGGATGTAAGAAATCTTTGCTGAA

Coding sequence (CDS)

ATGGGAAGAAGAGAGATGGGATTGATTTTCATACTGTTTTGTTCTACCATGACCACTGCATCTTCTCTGCAAGAAATCTTGCCAACAGAGTCTAATTACCACCAGAAACCTAACGCAGGAAAACATGGCCAAGATGGGGTTACTAACCAGATTGGCAGAAGATACGGTGCAAATGCAATCACCGTTTCTCATGGGGTTGGTCATGGAAATGCTGCCAGCGGAGGCGGCGGAGATGGTGGTGGCAGTAGACCAAATACAGGAGGAGGAGGTACCGCCGTAATCCCTATTTATGCAGCTGGTTCGGCACAAGCACGTCACCGCCAGGGTCGACCGCGCAATGCTGGAAATCGCCATGAGAACAACATGGCGCTTCTGGTAGCTGCAGTTTTGGCTGCCATTGCGCATCTGTACAGAGTTTTCTAA

Protein sequence

MGRREMGLIFILFCSTMTTASSLQEILPTESNYHQKPNAGKHGQDGVTNQIGRRYGANAITVSHGVGHGNAASGGGGDGGGSRPNTGGGGTAVIPIYAAGSAQARHRQGRPRNAGNRHENNMALLVAAVLAAIAHLYRVF
Homology
[Close]
BLAST of Tan0013971 vs. NCBI nr
Match: XP_022987717.1 (uncharacterized protein LOC111485159 [Cucurbita maxima])

HSP 1 Score: 183.3 bits (464), Expect = 1.4e-42
Identity = 101/140 (72.14%), Postives = 114/140 (81.43%), Query Frame = 0 

Query: 3   RREMGLIFILFCSTMTTASSL--QEILPTESNYHQKPNAGKHGQDGVTNQIGRRYGANAI 62
           RRE+ L+F+LFCST+   SS   Q+ILPTE NYHQK NA KHGQDGVTN+I   Y A AI
Sbjct: 4   RRELSLMFLLFCSTIPAISSARQQQILPTEPNYHQKTNAEKHGQDGVTNRISSIYSARAI 63

Query: 63  TVSHGVGHGNAASGGGGDGGGSRPNTGGGGTAVIPIYAAGSAQARHRQGRPRNAGNRHEN 122
           TVS G+GHG+AA GGG +GGG RP  GGGG AVIP+YAAGSAQA HRQGRPRNAGN +EN
Sbjct: 64  TVSQGIGHGSAA-GGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYEN 123

Query: 123 NMALLVAAVLAAIAHLYRVF 141
           NM LLVA+VLAAIAHL+ VF
Sbjct: 124 NMGLLVASVLAAIAHLHLVF 142

[Close]
BLAST of Tan0013971 vs. NCBI nr
Match: XP_023517064.1 (glycine-rich RNA-binding protein GRP1A-like [Cucurbita pepo subsp. pepo] >KAG7032020.1 hypothetical protein SDJN02_06062 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 179.9 bits (455), Expect = 1.5e-41
Identity = 100/140 (71.43%), Postives = 114/140 (81.43%), Query Frame = 0 

Query: 3   RREMGLIFILFCSTMTTASSL--QEILPTESNYHQKPNAGKHGQDGVTNQIGRRYGANAI 62
           RRE+ L+F+LFCST+   SS   Q+ILPTESNYHQK NA KHG+DGVTN+I   Y A AI
Sbjct: 4   RRELTLMFLLFCSTIPAISSALQQQILPTESNYHQKTNAEKHGKDGVTNRISSIYSARAI 63

Query: 63  TVSHGVGHGNAASGGGGDGGGSRPNTGGGGTAVIPIYAAGSAQARHRQGRPRNAGNRHEN 122
           TVS G+GHG+AA GGG +GGG RP  GGGG AVIP+YAAGSAQA HRQGR RNAGN +EN
Sbjct: 64  TVSQGIGHGSAA-GGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRTRNAGNHYEN 123

Query: 123 NMALLVAAVLAAIAHLYRVF 141
           NM LLVA+VLAAIAHL+ VF
Sbjct: 124 NMGLLVASVLAAIAHLHLVF 142

[Close]
BLAST of Tan0013971 vs. NCBI nr
Match: XP_022957462.1 (glycine-rich RNA-binding protein GRP1A-like [Cucurbita moschata])

HSP 1 Score: 178.3 bits (451), Expect = 4.5e-41
Identity = 99/140 (70.71%), Postives = 113/140 (80.71%), Query Frame = 0 

Query: 3   RREMGLIFILFCSTMTTASSL--QEILPTESNYHQKPNAGKHGQDGVTNQIGRRYGANAI 62
           RRE+ L+F+LFCST+   SS   Q+ILPTESNYHQK NA KHG+DGVTN+I   Y A AI
Sbjct: 4   RRELTLMFLLFCSTIPAISSALQQQILPTESNYHQKTNAEKHGKDGVTNRISSIYSARAI 63

Query: 63  TVSHGVGHGNAASGGGGDGGGSRPNTGGGGTAVIPIYAAGSAQARHRQGRPRNAGNRHEN 122
           TVS G+GHG+AA GGG +GGG RP  GGGG AVIP+YAAGSAQA HRQGR RNAGN +EN
Sbjct: 64  TVSQGIGHGSAA-GGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRTRNAGNHYEN 123

Query: 123 NMALLVAAVLAAIAHLYRVF 141
           NM LLVA+VLAAI HL+ VF
Sbjct: 124 NMGLLVASVLAAIVHLHLVF 142

[Close]
BLAST of Tan0013971 vs. NCBI nr
Match: KAG6601227.1 (hypothetical protein SDJN03_06460, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 172.2 bits (435), Expect = 3.2e-39
Identity = 96/134 (71.64%), Postives = 109/134 (81.34%), Query Frame = 0 

Query: 9   IFILFCSTMTTASSL--QEILPTESNYHQKPNAGKHGQDGVTNQIGRRYGANAITVSHGV 68
           +F+LFCST+   SS   Q+ILPTESNYHQK NA KHG+DGVTN+I   Y A AITVS G+
Sbjct: 1   MFLLFCSTIPAISSALQQQILPTESNYHQKTNAEKHGKDGVTNRISSIYSARAITVSQGI 60

Query: 69  GHGNAASGGGGDGGGSRPNTGGGGTAVIPIYAAGSAQARHRQGRPRNAGNRHENNMALLV 128
           GHG+AA GGG +GGG RP  GGGG AVIP+YAAGSAQA HRQGR RNAGN +ENNM LLV
Sbjct: 61  GHGSAA-GGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRTRNAGNHYENNMGLLV 120

Query: 129 AAVLAAIAHLYRVF 141
           A+VLAAIAHL+ VF
Sbjct: 121 ASVLAAIAHLHLVF 133

[Close]
BLAST of Tan0013971 vs. NCBI nr
Match: XP_038892711.1 (uncharacterized protein LOC120081693 [Benincasa hispida])

HSP 1 Score: 168.7 bits (426), Expect = 3.6e-38
Identity = 95/140 (67.86%), Postives = 109/140 (77.86%), Query Frame = 0 

Query: 3   RREMGLIFILFCSTMTTASSL--QEILPTESNYHQKPNAGKHGQDGVTNQIGRRYGANAI 62
           RR + LI +L CSTM  +S+   Q+I PTESNY QK    K  +DG+TNQI RRY A  I
Sbjct: 4   RRRVRLILLLLCSTMAISSAALQQQIFPTESNYQQKTYTEKRSKDGITNQIARRYSATEI 63

Query: 63  TVSHGVGHGNAASGGGGDGGGSRPNTGGGGTAVIPIYAAGSAQARHRQGRPRNAGNRHEN 122
           TVS+G+G G+A +GGG +GGGSRP+  GGGTAVIP+YAAGSAQA HRQGRP NAGNRHEN
Sbjct: 64  TVSNGIGQGSAVAGGGENGGGSRPH-NGGGTAVIPVYAAGSAQAHHRQGRPHNAGNRHEN 123

Query: 123 NMALLVAAVLAAIAHLYRVF 141
           N  LLVAAVLAAIAHLY VF
Sbjct: 124 NRGLLVAAVLAAIAHLYGVF 142

[Close]
BLAST of Tan0013971 vs. ExPASy TrEMBL
Match: A0A6J1JB47 (uncharacterized protein LOC111485159 OS=Cucurbita maxima OX=3661 GN=LOC111485159 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 6.8e-43
Identity = 101/140 (72.14%), Postives = 114/140 (81.43%), Query Frame = 0 

Query: 3   RREMGLIFILFCSTMTTASSL--QEILPTESNYHQKPNAGKHGQDGVTNQIGRRYGANAI 62
           RRE+ L+F+LFCST+   SS   Q+ILPTE NYHQK NA KHGQDGVTN+I   Y A AI
Sbjct: 4   RRELSLMFLLFCSTIPAISSARQQQILPTEPNYHQKTNAEKHGQDGVTNRISSIYSARAI 63

Query: 63  TVSHGVGHGNAASGGGGDGGGSRPNTGGGGTAVIPIYAAGSAQARHRQGRPRNAGNRHEN 122
           TVS G+GHG+AA GGG +GGG RP  GGGG AVIP+YAAGSAQA HRQGRPRNAGN +EN
Sbjct: 64  TVSQGIGHGSAA-GGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRPRNAGNHYEN 123

Query: 123 NMALLVAAVLAAIAHLYRVF 141
           NM LLVA+VLAAIAHL+ VF
Sbjct: 124 NMGLLVASVLAAIAHLHLVF 142

[Close]
BLAST of Tan0013971 vs. ExPASy TrEMBL
Match: A0A6J1GZ71 (glycine-rich RNA-binding protein GRP1A-like OS=Cucurbita moschata OX=3662 GN=LOC111458855 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 2.2e-41
Identity = 99/140 (70.71%), Postives = 113/140 (80.71%), Query Frame = 0 

Query: 3   RREMGLIFILFCSTMTTASSL--QEILPTESNYHQKPNAGKHGQDGVTNQIGRRYGANAI 62
           RRE+ L+F+LFCST+   SS   Q+ILPTESNYHQK NA KHG+DGVTN+I   Y A AI
Sbjct: 4   RRELTLMFLLFCSTIPAISSALQQQILPTESNYHQKTNAEKHGKDGVTNRISSIYSARAI 63

Query: 63  TVSHGVGHGNAASGGGGDGGGSRPNTGGGGTAVIPIYAAGSAQARHRQGRPRNAGNRHEN 122
           TVS G+GHG+AA GGG +GGG RP  GGGG AVIP+YAAGSAQA HRQGR RNAGN +EN
Sbjct: 64  TVSQGIGHGSAA-GGGENGGGGRPQAGGGGAAVIPVYAAGSAQAHHRQGRTRNAGNHYEN 123

Query: 123 NMALLVAAVLAAIAHLYRVF 141
           NM LLVA+VLAAI HL+ VF
Sbjct: 124 NMGLLVASVLAAIVHLHLVF 142

[Close]
BLAST of Tan0013971 vs. ExPASy TrEMBL
Match: A0A6J1G000 (uncharacterized protein LOC111449437 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449437 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 2.3e-38
Identity = 99/137 (72.26%), Postives = 105/137 (76.64%), Query Frame = 0 

Query: 1   MGRREMGLIFILFCSTMT-TASSLQEILPTESNYHQKPNAGKHGQDGVTNQIGRRYGANA 60
           MGR+EMGLIFILFCS M   ASSLQEILPTESN HQK N  KHG+DG TNQIGRR  A A
Sbjct: 1   MGRKEMGLIFILFCSAMAIIASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACA 60

Query: 61  ITVSHGVGHGNAASGGGGDGGGSRPNTGGGGTAVIPIYAAGSAQARHRQGRPRNAGNRHE 120
           ITVS  V HG  AS GG  GGG   +   GG+AVIPIY AGSAQA+ R+GRP NAG RHE
Sbjct: 61  ITVSQAVAHGGGASRGGARGGGGVSSPHTGGSAVIPIYVAGSAQAQRRRGRPVNAGTRHE 120

Query: 121 NNMALLVAAVLAAIAHL 137
           NNM LLVAA LAAIAHL
Sbjct: 121 NNMWLLVAAALAAIAHL 137

[Close]
BLAST of Tan0013971 vs. ExPASy TrEMBL
Match: A0A6J1FZV5 (uncharacterized protein LOC111449437 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449437 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 5.0e-38
Identity = 100/137 (72.99%), Postives = 106/137 (77.37%), Query Frame = 0 

Query: 1   MGRREMGLIFILFCSTMT-TASSLQEILPTESNYHQKPNAGKHGQDGVTNQIGRRYGANA 60
           MGR+EMGLIFILFCS M   ASSLQEILPTESN HQK N  KHG+DG TNQIGRR  A A
Sbjct: 1   MGRKEMGLIFILFCSAMAIIASSLQEILPTESNCHQKTNTEKHGEDGATNQIGRRNSACA 60

Query: 61  ITVSHGVGHGNAASGGGGDGGGSRPNTGGGGTAVIPIYAAGSAQARHRQGRPRNAGNRHE 120
           ITVS  V HG  A GG   GG S P+T  GG+AVIPIY AGSAQA+ R+GRP NAG RHE
Sbjct: 61  ITVSQAVAHGGGARGG---GGVSSPHT--GGSAVIPIYVAGSAQAQRRRGRPVNAGTRHE 120

Query: 121 NNMALLVAAVLAAIAHL 137
           NNM LLVAA LAAIAHL
Sbjct: 121 NNMWLLVAAALAAIAHL 132

[Close]
BLAST of Tan0013971 vs. ExPASy TrEMBL
Match: A0A6J1HTB9 (uncharacterized protein LOC111467612 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467612 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 7.3e-37
Identity = 99/138 (71.74%), Postives = 106/138 (76.81%), Query Frame = 0 

Query: 1   MGRREMGLIFILFCSTMTTASSLQEILPTESNYHQKPNAGKHGQDGVTNQIGRRYGANAI 60
           MGRRE+GLIFILF S M  ASSLQEIL TESN HQK N  KHG+DG TNQIGRR  A AI
Sbjct: 1   MGRREIGLIFILFGSAMAIASSLQEILATESNCHQKTNTEKHGEDGATNQIGRRNRACAI 60

Query: 61  TVSHGVGHGNAASGGGGDGGG--SRPNTGGGGTAVIPIYAAGSAQARHRQGRPRNAGNRH 120
           TVS  V HG  AS GG   GG  S P+T GGG+AVIPIY AGSAQA+ R+GRP NAGNRH
Sbjct: 61  TVSQAVAHGGGASRGGASRGGGVSSPHT-GGGSAVIPIYVAGSAQAQRRRGRPVNAGNRH 120

Query: 121 ENNMALLVAAVLAAIAHL 137
           EN+M LLVAA LAA AHL
Sbjct: 121 ENDMWLLVAAALAATAHL 137

The following BLAST results are available for this feature:
BLAST of Tan0013971 vs.
Match NameE-valueIdentityDescription
BLAST of Tan0013971 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022987717.11.4e-4272.14uncharacterized protein LOC111485159 [Cucurbita maxima][more]
XP_023517064.11.5e-4171.43glycine-rich RNA-binding protein GRP1A-like [Cucurbita pepo subsp. pepo] >KAG703... [more]
XP_022957462.14.5e-4170.71glycine-rich RNA-binding protein GRP1A-like [Cucurbita moschata][more]
KAG6601227.13.2e-3971.64hypothetical protein SDJN03_06460, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038892711.13.6e-3867.86uncharacterized protein LOC120081693 [Benincasa hispida][more]
BLAST of Tan0013971 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JB476.8e-4372.14uncharacterized protein LOC111485159 OS=Cucurbita maxima OX=3661 GN=LOC111485159... [more]
A0A6J1GZ712.2e-4170.71glycine-rich RNA-binding protein GRP1A-like OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1G0002.3e-3872.26uncharacterized protein LOC111449437 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1FZV55.0e-3872.99uncharacterized protein LOC111449437 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1HTB97.3e-3771.74uncharacterized protein LOC111467612 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
BLAST of Tan0013971 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0013971.1Tan0013971.1mRNA
Tan0013971.2Tan0013971.2mRNA