Tan0013944 (gene) Snake gourd v1

Overview
NameTan0013944
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionRibonuclease H
LocationLG09: 4829335 .. 4831624 (+)
RNA-Seq ExpressionTan0013944
SyntenyTan0013944
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCACAGTACCCACCAGGTTATTATCCACCCTCGTATGGATATTACCCATATCAAGTAAATAGTGCATCTGCTCTATATGTTCCTTACTCAAGCCAAGGTTCAAGACCAATGATGAATCAAGGCTTCCAGCCTCATAAGCAGCAACAGGTGGTCACCACTGGACAACAGGGCAACAAAGTAACATAGAAGCCTCAGTTTGAACCTATTCCAATGACATATACAGAACTTTTACCTCAGTTGTTCCAGAATCTGCAATTGACACCTAAGCCCTTACGACCTTTGCAACCCCCCCTATCCAAGATGGTATGATCCGAACGCTCATTGTGACTATCATGCAGGAGCTGCTGCGCATACGACAGAAAACTGTATCGCCTTGAAGTATAAGGTACAAGAGCTCATCAACACAGGGTGGTTAAATTTCAAAAAAGAAAAGGGCCCCAACGTCAATAAGAATCCATTGCCTAATCACCAAGTAAATGCGATAGAACATCAGAGTGTTGATGCAAAAGCACAGGTTTCAACAATTGTGACCCCGTTGGAAAAACTTTTTAAAATTCTACTTGTTAATGGCTATGTATCTGTAGAATACTTATACCCAGATTCTACTCAAGAAGAATATAATGATAACTTGGCCTGTTCATTTCACGCTGGGGCAAAAGGTCATTCTTTGGATCGATGTCACCACTTTCGCAAGAGGGTCCAAGAATTGATGGACATGAAGGTTTTTACTGTTGCACAATCTCGTGGCTTTTATCCAGATAATGAAGTGGGCACTATAGAAGGACTTTCCTCTAAAAAGGTTGGTTTAAATGTGCCTTTTAAACCTCTCACAATCTTTCATCGCAAAAAGACCACCCTACTTGCTACTGATCTGAAGCCAATCACCATCCATATGCCAACTCCTTTTAAGTATAAAAGTTCGAAAGCAGTACCTTGGAGCTATGAATACAAGGTGTCTATCAACTCAGAAACACCGTCACTTCTTATCGACAATATCACCGAAGTGAGGGGCCAGACACGAAGTGGGAAATGTTATACTCCTAATCCGCTTGTAAAGCAATGTGAAAATAAGGGAAAAGAACAAAAGTTGGGTGTTAAAACTAGTACAGGAAATGATGATGAGCTCCATGAAACATTAAACGAGATGAAGACCAAATCTTCTGTGTCTGAAGATGATGCCCAAGAGTTTCTAAAACTGGTTAAACAAAGTGAATACAAAGTGATTGATCAATTAGCTCGAACACCTGCAAAAATTTTCATATTTTCTTTGTTGTTATCCTCAGAAACACATCGAAATATGATACTAGAAGCATTAAACCAGGCCTATGTTCCTAATGACATCACATCAGACAGTTTGAACAATATCGTGGGAAATATAACTGCGTGCAACTCCATAACCTTTACGGATGATGAGATACCCCCAGAAGGTACAAGACACACAAAGGCACTTCATATTTCTGTCAAATGTAAAGATTTCTTGATCGCAAAAGTCCTAGTTGACAATGGATCTTCATTGAACACAATGCCAAAATCAACCTTAGAAAGGTTGCCTGTTGACATGTCTCACATGAGGCCTAGCGTTGTGGTAGTAAGGGCTTTTGATGGAACACGCAGTCAGGTAGTTGGAGATATTTATGTCCCAATACAAATAGGTCCTTGCACATTTACTATAACCTTTCAAGTTATGGACATCCCGACCGCATACAACTTTTTACTAGGGCGTCCTTGGATTCATTCCGCAGGAGCTGCCCCATCAACACTCCACCAAAAGCTAAAATTTTCAGTTGGAAAAAGTCTAGTAATTGTCTTGGGATAAGAGGATATTTGGGTTTCGATACCAGCTTCAATGCCTTATGTTGAAGCGGCAGAAGATGCTTTTGAGTCATCATTTCAAACTTTTGAGGTTGCGAGCGCCACGTTCCTTCATTGAGAACCTAAGAAATTCAGATTCAAACCACCAAGTGATTCTTATAAAAGTAATAGTTGCTTGGATGATATTTTGAGCCTAACCAGAAATATGAAAATATTTGGGTTGGGGCACAAACCCAATAGAATGGATATGATTAGAGTACAAAAGCAGGAAAAGGAAAAACGGTTAGCCAGATTGGAAAATCGTGAACTAAAGCATCAGGAAGAAAGGATTCCTCCTCTCTACCATTCTTTCAAAAGTGTTGGTGTACTTCATCCAAAGAGTTGTGGAGATTATGCAATCGCAACCGTGATTGAAGAAGAAGAAATAGGCCCATGGATCTACCCATGCCCAAAGAATTTCAAGCTTGACAATTAG

mRNA sequence

ATGTCACAGTACCCACCAGGTTATTATCCACCCTCGTATGGATATTACCCATATCAAGTAAATAGTGCATCTGCTCTATATGTTCCTTACTCAAGCCAAGGTTCAAGACCAATGATGAATCAAGGCTTCCAGCCTCATAAGCAGCAACAGGTGGTCACCACTGGACAACAGGGCAACAAAAGTGTTGATGCAAAAGCACAGGTTTCAACAATTGTGACCCCGTTGGAAAAACTTTTTAAAATTCTACTTGTTAATGGCTATGTATCTGTAGAATACTTATACCCAGATTCTACTCAAGAAGAATATAATGATAACTTGGCCTGTTCATTTCACGCTGGGGCAAAAGGTCATTCTTTGGATCGATGTCACCACTTTCGCAAGAGGGTCCAAGAATTGATGGACATGAAGGTTTTTACTGTTGCACAATCTCGTGGCTTTTATCCAGATAATGAAGTGGGCACTATAGAAGGACTTTCCTCTAAAAAGGTTGGTTTAAATGTGCCTTTTAAACCTCTCACAATCTTTCATCGCAAAAAGACCACCCTACTTGCTACTGATCTGAAGCCAATCACCATCCATATGCCAACTCCTTTTAAGTATAAAAGTTCGAAAGCAGTACCTTGGAGCTATGAATACAAGGTGTCTATCAACTCAGAAACACCGTCACTTCTTATCGACAATATCACCGAAGTGAGGGGCCAGACACGAAGTGGGAAATGTTATACTCCTAATCCGCTTGAAAAGGAAAAACGGTTAGCCAGATTGGAAAATCGTGAACTAAAGCATCAGGAAGAAAGGATTCCTCCTCTCTACCATTCTTTCAAAAGTGTTGGTGTACTTCATCCAAAGAGTTGTGGAGATTATGCAATCGCAACCGTGATTGAAGAAGAAGAAATAGGCCCATGGATCTACCCATGCCCAAAGAATTTCAAGCTTGACAATTAG

Coding sequence (CDS)

ATGTCACAGTACCCACCAGGTTATTATCCACCCTCGTATGGATATTACCCATATCAAGTAAATAGTGCATCTGCTCTATATGTTCCTTACTCAAGCCAAGGTTCAAGACCAATGATGAATCAAGGCTTCCAGCCTCATAAGCAGCAACAGGTGGTCACCACTGGACAACAGGGCAACAAAAGTGTTGATGCAAAAGCACAGGTTTCAACAATTGTGACCCCGTTGGAAAAACTTTTTAAAATTCTACTTGTTAATGGCTATGTATCTGTAGAATACTTATACCCAGATTCTACTCAAGAAGAATATAATGATAACTTGGCCTGTTCATTTCACGCTGGGGCAAAAGGTCATTCTTTGGATCGATGTCACCACTTTCGCAAGAGGGTCCAAGAATTGATGGACATGAAGGTTTTTACTGTTGCACAATCTCGTGGCTTTTATCCAGATAATGAAGTGGGCACTATAGAAGGACTTTCCTCTAAAAAGGTTGGTTTAAATGTGCCTTTTAAACCTCTCACAATCTTTCATCGCAAAAAGACCACCCTACTTGCTACTGATCTGAAGCCAATCACCATCCATATGCCAACTCCTTTTAAGTATAAAAGTTCGAAAGCAGTACCTTGGAGCTATGAATACAAGGTGTCTATCAACTCAGAAACACCGTCACTTCTTATCGACAATATCACCGAAGTGAGGGGCCAGACACGAAGTGGGAAATGTTATACTCCTAATCCGCTTGAAAAGGAAAAACGGTTAGCCAGATTGGAAAATCGTGAACTAAAGCATCAGGAAGAAAGGATTCCTCCTCTCTACCATTCTTTCAAAAGTGTTGGTGTACTTCATCCAAAGAGTTGTGGAGATTATGCAATCGCAACCGTGATTGAAGAAGAAGAAATAGGCCCATGGATCTACCCATGCCCAAAGAATTTCAAGCTTGACAATTAG

Protein sequence

MSQYPPGYYPPSYGYYPYQVNSASALYVPYSSQGSRPMMNQGFQPHKQQQVVTTGQQGNKSVDAKAQVSTIVTPLEKLFKILLVNGYVSVEYLYPDSTQEEYNDNLACSFHAGAKGHSLDRCHHFRKRVQELMDMKVFTVAQSRGFYPDNEVGTIEGLSSKKVGLNVPFKPLTIFHRKKTTLLATDLKPITIHMPTPFKYKSSKAVPWSYEYKVSINSETPSLLIDNITEVRGQTRSGKCYTPNPLEKEKRLARLENRELKHQEERIPPLYHSFKSVGVLHPKSCGDYAIATVIEEEEIGPWIYPCPKNFKLDN
Homology
BLAST of Tan0013944 vs. NCBI nr
Match: XP_022143495.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia])

HSP 1 Score: 180.3 bits (456), Expect = 2.7e-41
Identity = 100/242 (41.32%), Postives = 147/242 (60.74%), Query Frame = 0

Query: 60  KSVDAKAQVSTIVTPLEKLFKILLVNGYVSVEYLYPDSTQEEYNDNLACSFHAGAKGHSL 119
           + +++K++V+ I TP+E+LF+ILL +GYVSVEYL P+   + Y+++L C FHAGAKGH+L
Sbjct: 384 QEIESKSKVADITTPMEELFEILLGSGYVSVEYLCPNLKYKGYDESLTCPFHAGAKGHAL 443

Query: 120 DRCHHFRKRVQELMDMKVFTVA---QSRGFYPDNEVGTIEGLSSKKVGLNVPFKPLTIFH 179
           ++C+ FR  VQEL+D K+ TVA   Q +G     +V   EG  ++     +  K LTIF+
Sbjct: 444 EQCNSFRMIVQELLDSKILTVANSHQKKGINVVEDVSVAEGSIAEGSSDALKPKRLTIFY 503

Query: 180 RKKTTLLATDLKPITIHMPTPFKYKSSKAVPWSYEYKVSINSE--TPSLLIDNITEVRGQ 239
            +K        KPITI +P PF+YKSSKAVPW YE KV++  +  +P L +DNIT V G 
Sbjct: 504 SEKPDAPNCSRKPITITVPAPFEYKSSKAVPWKYECKVTVGQDVSSPPLPVDNITGVGGL 563

Query: 240 TRSGKCYTPNPLEKEKRLARLENRELKHQEERIPPLYHSFKSVGVLHPKSCGDYAIATVI 297
           T +G+CYTP+ L K       E  + K  E++   +    K    LH     +   A V+
Sbjct: 564 TXTGRCYTPDSLLKRVSETTSEKNKEKASEKKKEKVEEDKKGKAKLHEDVHDELVEAIVV 623

BLAST of Tan0013944 vs. NCBI nr
Match: XP_022158986.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia])

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-40
Identity = 102/242 (42.15%), Postives = 147/242 (60.74%), Query Frame = 0

Query: 60  KSVDAKAQVSTIVTPLEKLFKILLVNGYVSVEYLYPDSTQEEYNDNLACSFHAGAKGHSL 119
           + +++K++V+ I TP+ +LF+ILL +GYVSVEYL P+   + Y+++L C FHAGAKGHSL
Sbjct: 449 QEIESKSKVADIRTPMVELFEILLGSGYVSVEYLCPNLKYKGYDESLTCPFHAGAKGHSL 508

Query: 120 DRCHHFRKRVQELMDMKVFTVA---QSRGFYPDNEVGTIEGLSSKKVGLNVPFKPLTIFH 179
           ++C+ FR +VQEL+D K+ TVA   Q +G     +V   EG S       +  K LTIF+
Sbjct: 509 EQCNSFRMKVQELLDSKILTVANSHQKKGINIVEDVSVAEGSSDA-----LKPKCLTIFY 568

Query: 180 RKKTTLLATDLKPITIHMPTPFKYKSSKAVPWSYEYKVSINSE--TPSLLIDNITEVRGQ 239
            +K        KPITI +P PF+YKSSKAVPW Y+ KV++  +  +P L IDNIT V G 
Sbjct: 569 SEKPNAPNCSRKPITITVPAPFEYKSSKAVPWKYQCKVTVGQDVSSPPLPIDNITGVGGL 628

Query: 240 TRSGKCYTPNPLEKEKRLARLENRELKHQEERIPPLYHSFKSVGVLHPKSCGDYAIATVI 297
           TR+G+CYTP+ L K       E  + K  E++   +    K    LH     +   A V+
Sbjct: 629 TRTGRCYTPDSLLKCVNETTSEKNKEKASEKKKEKVEEDKKGKAKLHEDVHDELVEAIVV 685

BLAST of Tan0013944 vs. NCBI nr
Match: XP_022147189.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia])

HSP 1 Score: 176.4 bits (446), Expect = 3.8e-40
Identity = 103/253 (40.71%), Postives = 152/253 (60.08%), Query Frame = 0

Query: 46  HKQQQVVTTGQQGNKSVDAKAQVSTIVTPLEKLFKILLVNGYVSVEYLYPDSTQEEYNDN 105
           H+  Q+     QG   +++K++V+ I TP+ +LF+ILL +GY+SVEYL P    + Y+++
Sbjct: 478 HQNVQINAIECQG---IESKSKVABITTPMXELFEILLGSGYISVEYLCP--KYKGYDES 537

Query: 106 LACSFHAGAKGHSLDRCHHFRKRVQELMDMKVFTVAQSRGFYPDNEVGTIEGLSSKKVGL 165
           L C FH GAKGHSL++C+ FR +VQEL+D K+ T A S      N V  I  L ++    
Sbjct: 538 LTCXFHXGAKGHSLEQCNXFRMKVQELLDSKILTXANSHXKKXTNVVEDI--LVAEGSSD 597

Query: 166 NVPFKPLTIFHRKKTTLLATDLKPITIHMPTPFKYKSSKAVPWSYEYKVSINSE--TPSL 225
           ++  KPLTIF+R+K    +   KP  I +P PF+YKSSKAVPW YE KV++  +  +PSL
Sbjct: 598 SLKPKPLTIFYREKPDAPSCSRKPXXITVPXPFEYKSSKAVPWKYECKVTVGQDVSSPSL 657

Query: 226 LIDNITEVRGQTRSGKCYTPNPLEKEKRLARLENRELKHQEERIPPLYHSFKSVGVLHPK 285
            +DNIT V G TR+G+CYTP+ L K       E  + K  E++   +    K    LH  
Sbjct: 658 PVDNITGVGGLTRTGRCYTPDSLLKRVNETTSEKNKEKASEKKKEKVEEDKKGKAKLHED 717

Query: 286 SCGDYAIATVIEE 297
           +  +   A V+++
Sbjct: 718 ARDELVEAIVVKD 723

BLAST of Tan0013944 vs. NCBI nr
Match: XP_022155098.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica charantia])

HSP 1 Score: 173.7 bits (439), Expect = 2.5e-39
Identity = 92/240 (38.33%), Postives = 148/240 (61.67%), Query Frame = 0

Query: 30  YSSQGSRPMMNQGFQPHKQQQVVTTGQQGNKSVDAKAQVSTIVTPLEKLFKILLVNGYVS 89
           +  +    + N     HK  Q+     QG   ++++++VS I TP++ LF+IL  +GY+S
Sbjct: 524 FKKENXPDVKNNPLPNHKNVQINAVECQG---IESRSKVSEITTPMQXLFEILWXHGYMS 583

Query: 90  VEYLYPDSTQEEYNDNLACSFHAGAKGHSLDRCHHFRKRVQELMDMKVFTVAQSRGFYPD 149
           +E+L PD   E Y++NL C +HAGA+GH L++C  F+++VQEL+D+K+ TV QS   + +
Sbjct: 584 MEHLCPDIRCERYDENLTCPYHAGARGHPLEQCSCFKEKVQELLDLKILTVTQS---HQE 643

Query: 150 NEVGTIEGLS-SKKVGLNVPFKPLTIFHRKKTTLLATDLKPITIHMPTPFKYKSSKAVPW 209
             +  +E +S ++        KPLT+ +R+K  + +   +PITI +P PF+Y SSKAVPW
Sbjct: 644 QRIDVVEYVSTAESSSAAYKPKPLTVLYREKPEVPSNSWRPITIQVPAPFEYSSSKAVPW 703

Query: 210 SYEYKVSI--NSETPSLLIDNITEVRGQTRSGKCYTPNPLEKEKRLARLENRELKHQEER 267
            YE KV++   +++ SL +DNIT   G TR+G+CYTP  L K        N++ K  E++
Sbjct: 704 KYECKVTVGQKAQSSSLPVDNITRGGGMTRTGRCYTPESLLKHTNKPNSTNKKEKASEKK 757

BLAST of Tan0013944 vs. NCBI nr
Match: XP_022157796.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia])

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-35
Identity = 96/220 (43.64%), Postives = 136/220 (61.82%), Query Frame = 0

Query: 46  HKQQQVVTTGQQGNKSVDAKAQVSTIVTPLEKLFKILLVNGYVSVEYLYPDSTQEEYNDN 105
           H+  Q+     QG   +++K++V+ I TP E+LF+ILL +GYVSVEYL P+   +EY+++
Sbjct: 431 HQNVQINAIECQG---IESKSKVADIRTPKEELFEILLGSGYVSVEYLCPNLKYKEYDES 490

Query: 106 LACSFHAGAKGHSLDRCHHFRKRVQELMDMKVFTVA---QSRGFYPDNEVGTIEGLSSKK 165
           L C FHAGAKGHSL++C+ FR +VQEL+D K+ TVA   Q +G     +V   EG S   
Sbjct: 491 LTCPFHAGAKGHSLEQCNSFRMKVQELLDSKILTVANSHQKKGINVVEDVSVAEGSSDA- 550

Query: 166 VGLNVPFKPLTIFHRKKTTLLATDLKPITIHMPTPFKYKSSKAVPWSYEYKVSINSE--T 225
               +  K LTIF+ +K    +   KPITI +P PF+YKSSKAVPW Y+ KV++  +  +
Sbjct: 551 ----LKPKRLTIFYSEKPDAPSCSQKPITITVPAPFEYKSSKAVPWKYQCKVTVGQDVSS 610

Query: 226 PSLLIDNITEV-----RGQTRSGKCYTPNPLEKEKRLARL 256
           P L +DNITEV     + + +  K  T    E  K+L  L
Sbjct: 611 PPLPVDNITEVGDLGSQAEAKEIKIGTHMSSESRKKLIEL 642

BLAST of Tan0013944 vs. ExPASy TrEMBL
Match: A0A6J1CNY7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 1.3e-41
Identity = 100/242 (41.32%), Postives = 147/242 (60.74%), Query Frame = 0

Query: 60  KSVDAKAQVSTIVTPLEKLFKILLVNGYVSVEYLYPDSTQEEYNDNLACSFHAGAKGHSL 119
           + +++K++V+ I TP+E+LF+ILL +GYVSVEYL P+   + Y+++L C FHAGAKGH+L
Sbjct: 384 QEIESKSKVADITTPMEELFEILLGSGYVSVEYLCPNLKYKGYDESLTCPFHAGAKGHAL 443

Query: 120 DRCHHFRKRVQELMDMKVFTVA---QSRGFYPDNEVGTIEGLSSKKVGLNVPFKPLTIFH 179
           ++C+ FR  VQEL+D K+ TVA   Q +G     +V   EG  ++     +  K LTIF+
Sbjct: 444 EQCNSFRMIVQELLDSKILTVANSHQKKGINVVEDVSVAEGSIAEGSSDALKPKRLTIFY 503

Query: 180 RKKTTLLATDLKPITIHMPTPFKYKSSKAVPWSYEYKVSINSE--TPSLLIDNITEVRGQ 239
            +K        KPITI +P PF+YKSSKAVPW YE KV++  +  +P L +DNIT V G 
Sbjct: 504 SEKPDAPNCSRKPITITVPAPFEYKSSKAVPWKYECKVTVGQDVSSPPLPVDNITGVGGL 563

Query: 240 TRSGKCYTPNPLEKEKRLARLENRELKHQEERIPPLYHSFKSVGVLHPKSCGDYAIATVI 297
           T +G+CYTP+ L K       E  + K  E++   +    K    LH     +   A V+
Sbjct: 564 TXTGRCYTPDSLLKRVSETTSEKNKEKASEKKKEKVEEDKKGKAKLHEDVHDELVEAIVV 623

BLAST of Tan0013944 vs. ExPASy TrEMBL
Match: A0A6J1E2J7 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 6.4e-41
Identity = 102/242 (42.15%), Postives = 147/242 (60.74%), Query Frame = 0

Query: 60  KSVDAKAQVSTIVTPLEKLFKILLVNGYVSVEYLYPDSTQEEYNDNLACSFHAGAKGHSL 119
           + +++K++V+ I TP+ +LF+ILL +GYVSVEYL P+   + Y+++L C FHAGAKGHSL
Sbjct: 449 QEIESKSKVADIRTPMVELFEILLGSGYVSVEYLCPNLKYKGYDESLTCPFHAGAKGHSL 508

Query: 120 DRCHHFRKRVQELMDMKVFTVA---QSRGFYPDNEVGTIEGLSSKKVGLNVPFKPLTIFH 179
           ++C+ FR +VQEL+D K+ TVA   Q +G     +V   EG S       +  K LTIF+
Sbjct: 509 EQCNSFRMKVQELLDSKILTVANSHQKKGINIVEDVSVAEGSSDA-----LKPKCLTIFY 568

Query: 180 RKKTTLLATDLKPITIHMPTPFKYKSSKAVPWSYEYKVSINSE--TPSLLIDNITEVRGQ 239
            +K        KPITI +P PF+YKSSKAVPW Y+ KV++  +  +P L IDNIT V G 
Sbjct: 569 SEKPNAPNCSRKPITITVPAPFEYKSSKAVPWKYQCKVTVGQDVSSPPLPIDNITGVGGL 628

Query: 240 TRSGKCYTPNPLEKEKRLARLENRELKHQEERIPPLYHSFKSVGVLHPKSCGDYAIATVI 297
           TR+G+CYTP+ L K       E  + K  E++   +    K    LH     +   A V+
Sbjct: 629 TRTGRCYTPDSLLKCVNETTSEKNKEKASEKKKEKVEEDKKGKAKLHEDVHDELVEAIVV 685

BLAST of Tan0013944 vs. ExPASy TrEMBL
Match: A0A6J1D099 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.9e-40
Identity = 103/253 (40.71%), Postives = 152/253 (60.08%), Query Frame = 0

Query: 46  HKQQQVVTTGQQGNKSVDAKAQVSTIVTPLEKLFKILLVNGYVSVEYLYPDSTQEEYNDN 105
           H+  Q+     QG   +++K++V+ I TP+ +LF+ILL +GY+SVEYL P    + Y+++
Sbjct: 478 HQNVQINAIECQG---IESKSKVADITTPMXELFEILLGSGYISVEYLCP--KYKGYDES 537

Query: 106 LACSFHAGAKGHSLDRCHHFRKRVQELMDMKVFTVAQSRGFYPDNEVGTIEGLSSKKVGL 165
           L C FH GAKGHSL++C+ FR +VQEL+D K+ T A S      N V  I  L ++    
Sbjct: 538 LTCXFHXGAKGHSLEQCNXFRMKVQELLDSKILTXANSHXKKXTNVVEDI--LVAEGSSD 597

Query: 166 NVPFKPLTIFHRKKTTLLATDLKPITIHMPTPFKYKSSKAVPWSYEYKVSINSE--TPSL 225
           ++  KPLTIF+R+K    +   KP  I +P PF+YKSSKAVPW YE KV++  +  +PSL
Sbjct: 598 SLKPKPLTIFYREKPDAPSCSRKPXXITVPXPFEYKSSKAVPWKYECKVTVGQDVSSPSL 657

Query: 226 LIDNITEVRGQTRSGKCYTPNPLEKEKRLARLENRELKHQEERIPPLYHSFKSVGVLHPK 285
            +DNIT V G TR+G+CYTP+ L K       E  + K  E++   +    K    LH  
Sbjct: 658 PVDNITGVGGLTRTGRCYTPDSLLKRVNETTSEKNKEKASEKKKEKVEEDKKGKAKLHED 717

Query: 286 SCGDYAIATVIEE 297
           +  +   A V+++
Sbjct: 718 ARDELVEAIVVKD 723

BLAST of Tan0013944 vs. ExPASy TrEMBL
Match: A0A6J1DM29 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022231 OS=Momordica charantia OX=3673 GN=LOC111022231 PE=4 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 1.2e-39
Identity = 92/240 (38.33%), Postives = 148/240 (61.67%), Query Frame = 0

Query: 30  YSSQGSRPMMNQGFQPHKQQQVVTTGQQGNKSVDAKAQVSTIVTPLEKLFKILLVNGYVS 89
           +  +    + N     HK  Q+     QG   ++++++VS I TP++ LF+IL  +GY+S
Sbjct: 524 FKKENXPDVKNNPLPNHKNVQINAVECQG---IESRSKVSEITTPMQXLFEILWXHGYMS 583

Query: 90  VEYLYPDSTQEEYNDNLACSFHAGAKGHSLDRCHHFRKRVQELMDMKVFTVAQSRGFYPD 149
           +E+L PD   E Y++NL C +HAGA+GH L++C  F+++VQEL+D+K+ TV QS   + +
Sbjct: 584 MEHLCPDIRCERYDENLTCPYHAGARGHPLEQCSCFKEKVQELLDLKILTVTQS---HQE 643

Query: 150 NEVGTIEGLS-SKKVGLNVPFKPLTIFHRKKTTLLATDLKPITIHMPTPFKYKSSKAVPW 209
             +  +E +S ++        KPLT+ +R+K  + +   +PITI +P PF+Y SSKAVPW
Sbjct: 644 QRIDVVEYVSTAESSSAAYKPKPLTVLYREKPEVPSNSWRPITIQVPAPFEYSSSKAVPW 703

Query: 210 SYEYKVSI--NSETPSLLIDNITEVRGQTRSGKCYTPNPLEKEKRLARLENRELKHQEER 267
            YE KV++   +++ SL +DNIT   G TR+G+CYTP  L K        N++ K  E++
Sbjct: 704 KYECKVTVGQKAQSSSLPVDNITRGGGMTRTGRCYTPESLLKHTNKPNSTNKKEKASEKK 757

BLAST of Tan0013944 vs. ExPASy TrEMBL
Match: A0A6J1DZ90 (Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 8.1e-36
Identity = 96/220 (43.64%), Postives = 136/220 (61.82%), Query Frame = 0

Query: 46  HKQQQVVTTGQQGNKSVDAKAQVSTIVTPLEKLFKILLVNGYVSVEYLYPDSTQEEYNDN 105
           H+  Q+     QG   +++K++V+ I TP E+LF+ILL +GYVSVEYL P+   +EY+++
Sbjct: 431 HQNVQINAIECQG---IESKSKVADIRTPKEELFEILLGSGYVSVEYLCPNLKYKEYDES 490

Query: 106 LACSFHAGAKGHSLDRCHHFRKRVQELMDMKVFTVA---QSRGFYPDNEVGTIEGLSSKK 165
           L C FHAGAKGHSL++C+ FR +VQEL+D K+ TVA   Q +G     +V   EG S   
Sbjct: 491 LTCPFHAGAKGHSLEQCNSFRMKVQELLDSKILTVANSHQKKGINVVEDVSVAEGSSDA- 550

Query: 166 VGLNVPFKPLTIFHRKKTTLLATDLKPITIHMPTPFKYKSSKAVPWSYEYKVSINSE--T 225
               +  K LTIF+ +K    +   KPITI +P PF+YKSSKAVPW Y+ KV++  +  +
Sbjct: 551 ----LKPKRLTIFYSEKPDAPSCSQKPITITVPAPFEYKSSKAVPWKYQCKVTVGQDVSS 610

Query: 226 PSLLIDNITEV-----RGQTRSGKCYTPNPLEKEKRLARL 256
           P L +DNITEV     + + +  K  T    E  K+L  L
Sbjct: 611 PPLPVDNITEVGDLGSQAEAKEIKIGTHMSSESRKKLIEL 642

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022143495.12.7e-4141.32LOW QUALITY PROTEIN: uncharacterized protein LOC111013372 [Momordica charantia][more]
XP_022158986.11.3e-4042.15LOW QUALITY PROTEIN: uncharacterized protein LOC111025431 [Momordica charantia][more]
XP_022147189.13.8e-4040.71LOW QUALITY PROTEIN: uncharacterized protein LOC111016200 [Momordica charantia][more]
XP_022155098.12.5e-3938.33LOW QUALITY PROTEIN: uncharacterized protein LOC111022231, partial [Momordica ch... [more]
XP_022157796.11.7e-3543.64LOW QUALITY PROTEIN: uncharacterized protein LOC111024415 [Momordica charantia][more]
Match NameE-valueIdentityDescription
A0A6J1CNY71.3e-4141.32Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111013372 PE=4 SV=1[more]
A0A6J1E2J76.4e-4142.15Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111025431 PE=4 SV=1[more]
A0A6J1D0991.9e-4040.71Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111016200 PE=4 SV=1[more]
A0A6J1DM291.2e-3938.33LOW QUALITY PROTEIN: uncharacterized protein LOC111022231 OS=Momordica charantia... [more]
A0A6J1DZ908.1e-3643.64Ribonuclease H OS=Momordica charantia OX=3673 GN=LOC111024415 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 246..266
NoneNo IPR availablePANTHERPTHR33240OS08G0508500 PROTEINcoord: 38..251
NoneNo IPR availablePANTHERPTHR33240:SF7GAG-PRO-LIKE PROTEINcoord: 38..251

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0013944.1Tan0013944.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process