Tan0013935 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GATATTTCGAAGTGTTCTGTCTTCTGAAATTACCTTCTATTTTTAATTCAATCTCTGACTTCAAAGGGTTGCTTCGCTCCCAGTCCTCGGTCTTCGGGGCGAAGGTTTTTAAGCTGCGACAACGCTGGGGCTGGGCTTTCCAATAAGGGCTGCCGGTGATGGCCGACGACAAAGCGGCGATCGTGATGGCCAGCAGAGACAGAGAACGAGATCTAGAGCTTCTAATTCCGGTCGCCGGCTCGCCAAATGACGATGATTCCTGCAAGCCCTCGTCCTCTTCATCGTCCTCGCAGCAGACTGGCCGCGAGGTATTTTTACTTCTTTTCAATCTATTGCCCTTGAGTTTTCACCTCCTGATCGTTGGAAGCTACTCAGTGGTATTGCATGTTGTTCTATTGAAATATTTGTGTGTGGCAGTCTGTTTTAGGTTCGGTTTGCCTTCTTGCTAATCATTTCAATCATTTGCAATCGTTTTTCTCTTCTTCTTCTCCAATTTATCTGTTGCTTCTTATACTTGTGTTGCTCGGCGGGTTGCCTATTGGAGCATGAGTGATGAGTTGATCCTTACTTACTTTGTTATTCACTCTACCGCATTTTGTACGTTAGAAGTTTTACAAATTTGGAATTGGCTTGTTGCTTCTGCACTGTAGGGTTTTAAATATTTACTTAATCATCAAATCGATATTTCTGAAATTGTTGCCCTCAATTGACTTCTTCTCAAAGACGGAGTTTACTTAATGAGATAAGACGATGGTTGGAACTGTTGCTGAATTGATCTCAATTTTGTTCAGTCTTTTAAAATACGTATTCTTCGATGCATACTCCACAAGTGTGCATCTCTGCCCTTCCTAAAGTTATAGTACTGAAGGCTGAAGTTAAATTCCTCCATTCATTTGTAGCTCTTGAGTGCATTTATACCTGTTAGATGCTCCAAAAATCTCCAAACAGCTCTCCTGCTCAGCATGACTCCTGATATCAAAGTGATGAAGATGTTGATCATCTTTCCATCCATGGCCTCTATTCAAGCAATTGGTGGCCTCTTCTTTTTATATTTTTGGCATCCTTTGGTTCTCTCCATGTAGTATATCAGATACTATGTTTCAGATGCCTTGTGATTGCTCTTGTATGATTCATAAAAAAGCACTCCTCCAAGAGTTCGATCAATTAAAAATTCTTTTTGAAAAGTTTCTGATGGAGTATTTTCTTCATACAGATGTTAAAAACTTACATCTTTTGGATGTCTAGTTTACATTCTGAATTCTTGGCATGAAGTATGATTTTATTAATGTTATGGTTGGAGTGGCTATGGATGTGTACCTCACTAACTTAATTATCTGATGGAGAACGTCGATTTTTTTTTGGTTAAACATTGAGCTTGTTTGAACTTTCCTATCATATAAAATTGGAATAGCCAACTACTTGTTATTCAAATCACCGATCGTTTATTTTCTATCACCAATGGTGGGTTCAATTATCTATTTTATTTACTGTGCAGACATTTTACAGAGTCTTTAGGAGCTGGGCCTCAAAAAAGTTTATGACCGGATGGTTTGTTCTTTATTCTTGTCTCTGTATTTTACTTTAGTTAATGATTTTGGAGCCAAGAAAACAATAGCATATAAGCCACACTTGATTTAGGTATGCTTTCTTGTAGGGGTGTACATAAGCCGGTTGGGTTGAGTTATGCTAGTTTTTTGGACCAACCCGAATTTTTGGGTTGGTCATTATTCCAACCCAAATAACAGGGTAACCCAACCCAACCCAACCCAACATTTTCGGGTTGGGTTGGGTTGGGTCATCGGGTTAGTTTTTTTTTAATTTAAAATTTAAAGAAAAACCGAAATTAATATAAATATAAAAAATTCAAGAATTAAAAAACTACAAATGTCTTTATACTAAATAAAAATCATAAAACTTAAATATTCTATTACAAATTTACAATTATCCCAAGAAACTTCTAAATAAATCGTGCTCATCTAAAACAAAAACTCTTTGTTTTTCAAATATTGAATTAAAATTAGCCACTTAGTTTTAATTTATATTATGAAAAATTACAGACTTAAAAATCTATTTTAAGAGTTATTAAATAATAAATAATTACGAAATTAAATAAAAATAAATTACATACATGTATATATAGTTGTATGGTAGGTAAAAAAATAATTTTTAAAATTAATAATAAGTTCGGGTTGGTCGGGTCAACCCAAATTAATTTTAGGTAAACCCAAACCAACCCAACCCATACATTTTAATTTATTTGAACCCAACCCAACCAAAATAAATTTATAACCCAACCCAACCCGTCGAGTTGGGTTGGGTTGGTCGGGTTGTCGGGTTTTTTGAACACTCATACTTTCTTGCATATGCATTGTGGCCGTCATCACTAAAATGGCACTTTCAGGCTGCTGTTTGGAAACTGCACTAAAAAATTTTGCTCCCTTTTTTGTTAATGGAATGGAGTTTTTTTCCTTTACTCAGAAAATACATCCGACAGGGTGATAGGTTTCAAATTGGAAACAGTATTTGGTTGTTTTCAACGTGCCAGGGTTCAAATTACAGTTGTTTGTCATTGTGCTAGGTGATAAGGTAACATTTTTTATAATTCCTTTACATGTTGCCATCTGGCTGTTTTGCAGTGTCATTCTATTTCCAATTGCAATAACTTTCTATATAACATGGTGGTTTATACACTTTGTGGATGGATTCTTTTCTCCGATCTATGCTCAACTTGGAATTGATATCTTTGGTAAGCAATCTTGTTCACTTTAACGTTTCTTCCGAACCCATTCAATCCATGTGCAATTTGTTTGATATATATTTGATCTACTACGAGTGATTATTGTTATTTCATGTCCATCAATTTCAGTTTTCTTTGCTTGCTCATATATTGACTAGGTAATAATGATATATATATATATATATTGCCAAATGATTGATGAGTGTCTGTTCAATATGAAAAACCTATTAAATTGTAGATTTCAATTTTTTTTCTTTATCATAGGCTTATTCTTGTTTCTTGAATAGGTCTTGGATTTGCAACATCTGTTACGTTTATCTTCCTTGTTGGGGTGGTCATGTCATCATGGTTGGGTGCTTCTATTTTGGCTCTTGGAGAGTGGTTCATCAAGCGCATGCCATTTGTTCGTCATATTTACAATGCTTCTAAGCAGATTAGTTCTGCTATTTCACCAGGTACAGCTTTCTTAAGTATATTTATTTAACACAGTCAGGTTTATTTATGAACCATCTATAATCTTGTCATTATCTGTTAGATCAAAATACCAAAGCCTTCAAGGAAGTTGCAATCATTAGGCACCCCCGTATTGGTGAATATGCATTCGGGTTCATTACTTCAACTGTCACTCTCCAGGTATGTTATTTTGTGCCTCAATTTTTTAGTAACATTCTTCTAGGAAGCATTTAGACATTACTTTGGGTAATATATGCACACACACATTTTAATCTCAAGTTCTGATATGTGAATGGTGAACAAAATAAAAAGGTATTGGAGTTATTTGAATTCTAAATTTTGGATCTTTTTATAGAACATGAATGCAAATATATTTGATTTTGAAATTTCTTGTAAGACATGACTGATTTGATTTATATTTAGCTGGTTTTAGAACCGTCACAAACGTTTGTTACCTGACTTTGTAGCATTGCATATATGCAACTGATTTTTCTACTTTGCATAGGTTCCATGTTGTGTATCTCTTCTTATACGTTTTTTAAATATGGGTGTCATTTACAAACTTGGTTCACAAGAAGAGGCAACTTCAACCAATAATACCCTTATATCACATGCACGCCCATGCTTATCTTGAGCACGAATATCATTGACGTTGTTAGGTATACAAGTATGTTTTATTGAATGATTTATGTTCTCATACCCCAATTTTGTAGAAGTTGATGTATTGTTATCATATTGTTGTATCATGTTTTTTGTATTTGCTTCTTAGGATTGTATTGATGTAAGGGTTTATTTTATTTTTATGGTTATTGTGAATCTATCTTCAATTTTATATCCTAGTTTTGGTTAAAATTTTCTATGTTTTCATTGTTCAAAAAACTGTATGAATGTGGATGGACTGCCAACCATTTATGGCCAGCCTTAAGTGAGGATTAATTTTCCCAATATGCAGATTTCAACTAAGTCAGGGACTATCTTCTTTTAATTGTGTGGATAACTCAATTATGCACTTAGAATGGCATGCTTGGTATTCTGATCAACCATTTTGTTCCCTCTAAATGCAGAATTATTCTGGAGAGGAGGAGCTGTGTTGTGTATATGTTCCCACCAATCATCTTTACATTGGTGATGTTTTCCTAGTCAACTCTCAGGATGTTATTAGACCGAATTTATCAGTTCGGGAAGGAATCGGTGAGCTTTTTATTTTTATGTCGTTATGTCCACAATCACTGGACAGTTTCTCCTATACACATGAACTTAAAGCTCGCCATTTCTTTCTCAATTTTTTTAATGGCAGAAATCGTCGTGTCTGGAGGCATGTCGATGCCACAGATTCTGTCCATACTGGAACCACATATTCGACCAATTGATAGTAGAAGATTGACTAGAAGCTGAGACTGAAGATGTAGCATTGTTGGCCGCTAATCGGTATACGATACAACGTTGGCGAACCGATGTAGTTGTTGGAGTAGTTGATCTGCCTGCTGGGCATCAAAACCTTTAGTCGGTAAACCATAACTTATAATAGAAATTTAATTCTGGTAGATGACTTTGATATCATATCATATGTTGGATGGGGGGTGAGAATACTTGTTGATCCAGGATAGAAATGGGTGTGCATTAGAATTTTTCGCTTCATTCTAATTCAATCGAGAATGTATACTTTCTTCTTGATGAGTCACATTGTTCTATTGCTTCAGATGTATATTTGAGCCTGTACATATTTTTGCAGCAGCATTTCTTCTATGCTTCAACTGAACTATTTGAAGAACTTGCCAGTCAAACGCCTATATTCCTGGACGACGGATATGAACTTTTGTATGTTTCATGAGACAATTAGATTTAAGGGGGGAAAAAAGGAGAGAGAAGATGATTATGTTATTTTCAAACAAAAATGTGAATTAATAGTAGATTATTACTGAAGTCGTAATAATGGGAGGAAGTACTAGCTTGACAATAACATTTTACTCACCGCGGGCGCGGACATCTGTAAAAAGGTATGTGTGCATTATGAG GATATTTCGAAGTGTTCTGTCTTCTGAAATTACCTTCTATTTTTAATTCAATCTCTGACTTCAAAGGGTTGCTTCGCTCCCAGTCCTCGGTCTTCGGGGCGAAGGTTTTTAAGCTGCGACAACGCTGGGGCTGGGCTTTCCAATAAGGGCTGCCGGTGATGGCCGACGACAAAGCGGCGATCGTGATGGCCAGCAGAGACAGAGAACGAGATCTAGAGCTTCTAATTCCGGTCGCCGGCTCGCCAAATGACGATGATTCCTGCAAGCCCTCGTCCTCTTCATCGTCCTCGCAGCAGACTGGCCGCGAGACATTTTACAGAGTCTTTAGGAGCTGGGCCTCAAAAAAGTTTATGACCGGATGTGTCATTCTATTTCCAATTGCAATAACTTTCTATATAACATGGTGGTTTATACACTTTGTGGATGGATTCTTTTCTCCGATCTATGCTCAACTTGGAATTGATATCTTTGGTCTTGGATTTGCAACATCTGTTACGTTTATCTTCCTTGTTGGGGTGGTCATGTCATCATGGTTGGGTGCTTCTATTTTGGCTCTTGGAGAGTGGTTCATCAAGCGCATGCCATTTGTTCGTCATATTTACAATGCTTCTAAGCAGATTAGTTCTGCTATTTCACCAGATCAAAATACCAAAGCCTTCAAGGAAGTTGCAATCATTAGGCACCCCCGTATTGGTGAATATGCATTCGGGTTCATTACTTCAACTGTCACTCTCCAGAATTATTCTGGAGAGGAGGAGCTGTGTTGTGTATATGTTCCCACCAATCATCTTTACATTGGTGATGTTTTCCTAGTCAACTCTCAGGATGTTATTAGACCGAATTTATCAGTTCGGGAAGGAATCGAAATCGTCGTGTCTGGAGGCATGTCGATGCCACAGATTCTGTCCATACTGGAACCACATATTCGACCAATTGATAGTAGAAGATTGACTAGAAGCTGAGACTGAAGATGTAGCATTGTTGGCCGCTAATCGGTATACGATACAACGTTGGCGAACCGATGTAGTTGTTGGAGTAGTTGATCTGCCTGCTGGGCATCAAAACCTTTAGTCGCAGCATTTCTTCTATGCTTCAACTGAACTATTTGAAGAACTTGCCAGTCAAACGCCTATATTCCTGGACGACGGATATGAACTTTTGTATGTTTCATGAGACAATTAGATTTAAGGGGGGAAAAAAGGAGAGAGAAGATGATTATGTTATTTTCAAACAAAAATGTGAATTAATAGTAGATTATTACTGAAGTCGTAATAATGGGAGGAAGTACTAGCTTGACAATAACATTTTACTCACCGCGGGCGCGGACATCTGTAAAAAGGTATGTGTGCATTATGAG ATGGCCGACGACAAAGCGGCGATCGTGATGGCCAGCAGAGACAGAGAACGAGATCTAGAGCTTCTAATTCCGGTCGCCGGCTCGCCAAATGACGATGATTCCTGCAAGCCCTCGTCCTCTTCATCGTCCTCGCAGCAGACTGGCCGCGAGACATTTTACAGAGTCTTTAGGAGCTGGGCCTCAAAAAAGTTTATGACCGGATGTGTCATTCTATTTCCAATTGCAATAACTTTCTATATAACATGGTGGTTTATACACTTTGTGGATGGATTCTTTTCTCCGATCTATGCTCAACTTGGAATTGATATCTTTGGTCTTGGATTTGCAACATCTGTTACGTTTATCTTCCTTGTTGGGGTGGTCATGTCATCATGGTTGGGTGCTTCTATTTTGGCTCTTGGAGAGTGGTTCATCAAGCGCATGCCATTTGTTCGTCATATTTACAATGCTTCTAAGCAGATTAGTTCTGCTATTTCACCAGATCAAAATACCAAAGCCTTCAAGGAAGTTGCAATCATTAGGCACCCCCGTATTGGTGAATATGCATTCGGGTTCATTACTTCAACTGTCACTCTCCAGAATTATTCTGGAGAGGAGGAGCTGTGTTGTGTATATGTTCCCACCAATCATCTTTACATTGGTGATGTTTTCCTAGTCAACTCTCAGGATGTTATTAGACCGAATTTATCAGTTCGGGAAGGAATCGAAATCGTCGTGTCTGGAGGCATGTCGATGCCACAGATTCTGTCCATACTGGAACCACATATTCGACCAATTGATAGTAGAAGATTGACTAGAAGCTGA MADDKAAIVMASRDRERDLELLIPVAGSPNDDDSCKPSSSSSSSQQTGRETFYRVFRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGIDIFGLGFATSVTFIFLVGVVMSSWLGASILALGEWFIKRMPFVRHIYNASKQISSAISPDQNTKAFKEVAIIRHPRIGEYAFGFITSTVTLQNYSGEEELCCVYVPTNHLYIGDVFLVNSQDVIRPNLSVREGIEIVVSGGMSMPQILSILEPHIRPIDSRRLTRS Homology
BLAST of Tan0013935 vs. ExPASy Swiss-Prot
Match: F4IUE7 (Protein CONTINUOUS VASCULAR RING 1 OS=Arabidopsis thaliana OX=3702 GN=COV1 PE=1 SV=2) HSP 1 Score: 401.0 bits (1029), Expect = 1.1e-110 Identity = 210/265 (79.25%), Postives = 225/265 (84.91%), Query Frame = 0
BLAST of Tan0013935 vs. ExPASy Swiss-Prot
Match: Q8VY49 (Protein LIKE COV 1 OS=Arabidopsis thaliana OX=3702 GN=LCV1 PE=2 SV=1) HSP 1 Score: 389.4 bits (999), Expect = 3.2e-107 Identity = 201/250 (80.40%), Postives = 214/250 (85.60%), Query Frame = 0
BLAST of Tan0013935 vs. ExPASy Swiss-Prot
Match: F4IQJ6 (Protein LIKE COV 3 OS=Arabidopsis thaliana OX=3702 GN=LCV3 PE=2 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 3.7e-95 Identity = 173/243 (71.19%), Postives = 204/243 (83.95%), Query Frame = 0
BLAST of Tan0013935 vs. ExPASy Swiss-Prot
Match: Q9C8C1 (Protein LIKE COV 2 OS=Arabidopsis thaliana OX=3702 GN=LCV2 PE=2 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 2.8e-87 Identity = 158/223 (70.85%), Postives = 186/223 (83.41%), Query Frame = 0
BLAST of Tan0013935 vs. NCBI nr
Match: XP_023529425.1 (protein LIKE COV 1-like [Cucurbita pepo subsp. pepo] >XP_023529427.1 protein LIKE COV 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 510.0 bits (1312), Expect = 1.2e-140 Identity = 257/267 (96.25%), Postives = 260/267 (97.38%), Query Frame = 0
BLAST of Tan0013935 vs. NCBI nr
Match: XP_022933770.1 (protein LIKE COV 1-like [Cucurbita moschata] >KAG7021856.1 Protein CONTINUOUS VASCULAR RING 1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 508.1 bits (1307), Expect = 4.7e-140 Identity = 256/267 (95.88%), Postives = 260/267 (97.38%), Query Frame = 0
BLAST of Tan0013935 vs. NCBI nr
Match: KAG6587967.1 (Protein CONTINUOUS VASCULAR RING 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 507.7 bits (1306), Expect = 6.2e-140 Identity = 255/267 (95.51%), Postives = 260/267 (97.38%), Query Frame = 0
BLAST of Tan0013935 vs. NCBI nr
Match: XP_038880670.1 (protein LIKE COV 1-like [Benincasa hispida]) HSP 1 Score: 501.9 bits (1291), Expect = 3.4e-138 Identity = 254/267 (95.13%), Postives = 260/267 (97.38%), Query Frame = 0
BLAST of Tan0013935 vs. NCBI nr
Match: XP_022145033.1 (protein LIKE COV 1-like [Momordica charantia]) HSP 1 Score: 501.5 bits (1290), Expect = 4.4e-138 Identity = 253/267 (94.76%), Postives = 259/267 (97.00%), Query Frame = 0
BLAST of Tan0013935 vs. ExPASy TrEMBL
Match: A0A6J1F5R8 (protein LIKE COV 1-like OS=Cucurbita moschata OX=3662 GN=LOC111441082 PE=4 SV=1) HSP 1 Score: 508.1 bits (1307), Expect = 2.3e-140 Identity = 256/267 (95.88%), Postives = 260/267 (97.38%), Query Frame = 0
BLAST of Tan0013935 vs. ExPASy TrEMBL
Match: A0A6J1CUV2 (protein LIKE COV 1-like OS=Momordica charantia OX=3673 GN=LOC111014556 PE=4 SV=1) HSP 1 Score: 501.5 bits (1290), Expect = 2.1e-138 Identity = 253/267 (94.76%), Postives = 259/267 (97.00%), Query Frame = 0
BLAST of Tan0013935 vs. ExPASy TrEMBL
Match: A0A1S3CI12 (protein LIKE COV 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500987 PE=4 SV=1) HSP 1 Score: 500.7 bits (1288), Expect = 3.7e-138 Identity = 254/267 (95.13%), Postives = 259/267 (97.00%), Query Frame = 0
BLAST of Tan0013935 vs. ExPASy TrEMBL
Match: A0A6J1ICA3 (protein LIKE COV 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471676 PE=4 SV=1) HSP 1 Score: 500.0 bits (1286), Expect = 6.2e-138 Identity = 252/267 (94.38%), Postives = 258/267 (96.63%), Query Frame = 0
BLAST of Tan0013935 vs. ExPASy TrEMBL
Match: A0A1S4E3W8 (protein LIKE COV 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500987 PE=4 SV=1) HSP 1 Score: 493.0 bits (1268), Expect = 7.6e-136 Identity = 254/276 (92.03%), Postives = 259/276 (93.84%), Query Frame = 0
BLAST of Tan0013935 vs. TAIR 10
Match: AT2G20120.1 (Protein of unknown function (DUF502) ) HSP 1 Score: 400.2 bits (1027), Expect = 1.3e-111 Identity = 210/265 (79.25%), Postives = 225/265 (84.91%), Query Frame = 0
BLAST of Tan0013935 vs. TAIR 10
Match: AT2G20130.1 (like COV 1 ) HSP 1 Score: 389.4 bits (999), Expect = 2.3e-108 Identity = 201/250 (80.40%), Postives = 214/250 (85.60%), Query Frame = 0
BLAST of Tan0013935 vs. TAIR 10
Match: AT2G18460.1 (like COV 3 ) HSP 1 Score: 349.4 bits (895), Expect = 2.6e-96 Identity = 173/243 (71.19%), Postives = 204/243 (83.95%), Query Frame = 0
BLAST of Tan0013935 vs. TAIR 10
Match: AT1G43130.1 (like COV 2 ) HSP 1 Score: 323.2 bits (827), Expect = 2.0e-88 Identity = 158/223 (70.85%), Postives = 186/223 (83.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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