Tan0013933 (gene) Snake gourd v1

Overview


Name	Tan0013933
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Bromo domain-containing protein
Location	LG06: 17503619 .. 17509273 (+)
RNA-Seq Expression	Tan0013933
Synteny	Tan0013933

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCTACAGGAGCCATGGGAGCCAATTCATGAATTTCGCATCAATGATTTAAAAAGAATTTTTAAATGATTACTGTCTCCTGTTATGTAACGTTTAGTTTTGAAATTAGAGGCCGAACTTGGTTATGTTTATTGTAAACGTTTTGTATTTCTATGGGATCCCAAATTAAATTAATTTTTATTTATCAACTTTGGCTTATTTAAACTTCAATTAGGGTCTCGAATGCATGCATGAGTAGTAATGTCCCTAGGAATTTATGTTCTAAAAGTAGGGGCGTTACAAAAAAATTGACCTATTTCGACAATTTTTTATCGAATGTTCTAAAAAATCTTTGAGAAATATATACATTTATCGAAGGTATTTAAAAAATCTTTGAAAAATATCTACTTTTTATCGAAGGTTATTAAAATCCTTTGAAAAAGATATGTATTTATCAAAGGATTTTAAAACACCTTTGAAAAATATATGATCATTTAACAAAGGTTTTTAAAAACCTTTGAAAAAGATATTATATTTATCAAAGGGCATTAAGAACCTTTGAAAATAATATGATCTTTTATCGAAGGTATTTAAAAAACCTTTGAAAAATATCTACTTTTTATCGAAGGTTATTAAAATCCTTTGAAAAAGATGTGTATTTATCAAAGGATTTTAAAACACCTTTGAAAAATATATGATCATTTAACAAAGGTTTTTAAAAACCTTTGAAAAAGATATTATATTTATCAAAGGATATTAAGAACCTTTGAAAATAATATGATATTTTATCGAAGGTATTTAAAAACCCTTTGAAAAATATCTACTTTTTATCGAGGGTTATTAAAAACCTTTGAAAAAGATGTGTATTTATCAGAGGATTTTAAAACACCTTTGAAAAATATATGATCATTTAACAAAGGTTTTTAAAAACCTTTGAAAAATATCAACTATGTATCGAAGGTTATTAAAAACCTTTGAAAAAGATATTTATTTATCAAAGGTAACTAAGAACCTTTGAAAATAATATGTTCATTTATCGAACGCATTTAAAAAACCTTTGAAAAATAACTCTTTATATAAGTCATCAAAAAAAATTTTGAAAAAAATATTATATATTATATTTAACTTTTTATCGAAGGTTCTTAAACTCCTTAAAAAATATATTATATTTAATATTTTATTGAAGGTTATTGAAAACCCTCGAAAAAGGTATTATATTAAATATTTTAATATTTAAATATATTAAAAACAAAAATCTAATCACGAATCTTCAAGGGCATAATTGAATATATTTAATTTTGATAGTGGTGATGGTGTAATTTAAAAAGAATTGATTCGTGTTCTGAGTTATTTAATCAGCTTTATATATGTGAAGTAGAATTAAATAAGCTATTTTTGTTCAGTTTTATTTTATTTTTTTTTATAATTAAAAAAAAAAGCTCAGTCGCTCGATTGATAATTAAAAAAAAGAAGAGAGAGGTTGATTTAGGGTTGAAGATTTAGCCGGTTCATCTCCTTCCTTCTCTTCTTCTCCATAGTCACGATACCACACATTGCCCAACCTCTAAACCGCCTTGCACAAGTTGCTGGAGACAAGCTCAGTCGCCGGATCTTCGCCCTCACGCCAGATCTGCTTCGACCAATCGTCGATTAGATTTCGCCCAGTCGCACGCCGAAGAATCGTTCTCTGACAGTTCTCCTTCGATCCGTGTCATTCTCCTGCAACTTAAGCTCATACTTGCACCTCCACTGCAACCACCACCGGACGACGACCTGCTCAACGCCGCAACCTGCACAGTTCGTTGGATTTGACGCCTTCATTGGTGTTGTTGTCGCGTCGTCGTTCTCCCCTGTTATCGCGCATACTAGAAGAGAAGGAAAATTGGTATTACATATTCTATACTTCTATACTTAATTAAAATTGGCATTACATATTCGAATCTTCAAGGAAATTTGGTTCTCCTCTGTTATTCTTTACTTCTATACTCTGTCATGAAGGAAAAATGATCCCAAACTCACGTTTAGTCAATGCCTTTTCCAATTCTAAAAGTGTTTCACTTCTTTATTGTTCTCAAAAGTCATCTGGAAAAGAGACCATGGTTTTGCATTGATCTGTTTGAATGATTTCCAAATTTTAATGTTTACAGGAGGATCCAACCACTAGGAGGTGGCTGCAACATTTGCTACACAATGTAGGAATGAGTAGAGTTCCAAAGACTTGAGCAAAGCGTTGGATTTGATCATATGATGGTCAACTAAAACCGAATTGTATGTTTCGAATTTTACGATTTTGTTATATAGTCTCACAATCTCTGACAATGCTAAAACTTGTTTATTTCTCTCACGATTTATTTGTAAGCATTAATTATTGTTGTAATTAGGATGTTGTGTCTGAAAAAGAAAATGCATTTAACTTGAACAATGCCTTTTCGAGTAAAGGAATTATACATGTTCATATCTGCCGATAGAAGTGCTTTTTGTTGCTTGCTCTGTTTACCTTAAATAATCATATTCAAAATTTAAAAAACATGTAACATATGAGATTTATGGTTTCTCTTAAAAAAAATAATTAATAAATAAAAATCTGTGTGCATCCATAAATTGGAAGATCATATTTTCCCCTATAAATGTGATTTAGTAAAATGTTCATAAAATATTTATCATGTATTGACTTGTGTAAATATAGTAAAGGAATTTCTAATCATTGATTGTTAAATAACATTAGTCATTTTTTTTCTATCATTTTTTTCTAAATTAAAGTTTTTGTTGAACTTTTTGTTTTTGTTATGACATTTATTCTCAGCTAATTACGTTGTTTATAAGTTCATCTTTTTTTCTGTTGGAAGCAGAAAATGTGGGAATTAAAATTTTGCCCAACTTTATCTCTGTTGATCCCGAGAGGGATACGGTAGAACAAGTGCGGGAATACGTCAAAGGTATATGAGAGTCAGTTTTCCATCTATCTACCATACTTGTTAGACATACCAAATTAGTATAATTTTTGCCCTAATGTATTTTAGTTGCTAAGCTTAACGTGAATTGCTCACCTAGATGAATTTTGAGATAATTACTTTGCAATTGTTGTCTATAAGCTTAATTTCGCTACAATTTTTACTGACGCCTTGTTTAAGTAGAGTCATGAGCACTTTTGTCTATAAGCTTAATCATTCTTTTTTACACATCAATTTCTAGGTAATCTCTTGCTTTTTACAAAGAAGTGTCTTGCCATTTGCTACACGCTTGTAACATGGATAAGAGTTTGATGCAAATTGGAAATCGAGCATTGAAAGAATATAGAAATGGAGTTAGAAGTTTTCTAGATTTTGCATTTATGCATGCAACATCAGGTCAAATTTCTTGTCCATGTAAGAGATGTAATAATGCAGTACTTAAAACTCGAGATGACATTGAAGTAGATTTGTTAATGTTCGGATAGTTCCAAGTTACACTCAATGGACAATGCATGGTGAAGAAAGTTTGTCATATGAAGTAGGAGAAAGTGATAATGGTTACGATGATGAAGACATTTTTGAAATATTAGAGGATCATTTTGGTGTTTTTAACACCAAAGAATGAACTAGTAAAGGAGAATCAAATAAAATGTGGTTATGATGAAGAACCTAATGAGGATGCTTCTAAGTTTTATAGATTGTTGAATGATGCAGAAAAAGAGCTTTATCCTGGGTGTAAGAGATATTCTAAATTATCTTTCATTATGAAGTTGTTTCATCTAAAGTGTCTTGGCAATTGGAGTAATAAATCGTTTACTTTACTACTTGAGTTATTAAAAGATGTATTTCCAGAAGGCATTGATCTACCTACTAATTACTATGAGACAAGGAAGATCCTTCAAGATTTAGGGCTTAATTACTCAAAGATAGATGCATGCTCGAATAACTGCTTACTATATTGGAAGGAAAATGCTAATGCAGACAAATGTACAGTTTGTGGAGAATCAAATTTCTTCCACAAATGTACAAGTTGTGGAAGTCAACTGAATACCAGGTTATATTCTAAATTTTAGTTTCTTGTAAATAAAAAAAGTTTGATTATTGCTTTAATTTGTAGTGATGCTCATTCTTCTATATTTCTTAAATGTAGGAGATGTGTGAAAGGAACCAAAAGAACCGTCCTAAATTGAATGTATATCACACATGTGGTTCACAAAGTATACAACAAAGAGTTGAAAAAGAGGTAAATCAACAATTACAGGAACTTCTTTTAATTTAGTAAAATGATCTAATATATTTTTAACTTAAATATAGGTTCGGGAAACTAATAAAGAACCTAGTCGAATTAGAATGTGGGAGCTAACGCATTTGAGAAATAATGGAATTGCTGTGAATGAAACTACTCAAGAAAAAATAGTAAGTAGTGATACTTTTATCTTTAATATGAGACATAATGGAATGGTTGTGTCTGTGAAGGGTTGTGATAAAATTGGTTGCAGTGGAAATAGTACCACATTATCTGCTCTTTTTCATGTCATTGCCTTAATCCTTAATGATGATATTGTGGCATGAGAAGCTGCCTATAAGAATAGTTTAGTCAGTTTCCTCAAATCTACTTTCGCAATGGGATTTTGGATTGTTTGATGGTTTACATTGTCCTTTTTTTTCCTTTTGTTTTGTGTTTCCTTTGCAATTACCTATATCTTTTGCTTCTCTATAATTACAAATGGGGTTAAAATTAAGAGTTATGTGTTATGTTCATTCTTTTTCTTTCCTTTGAAGTTGTTAGTTGCATATATGTGTTAGTTAAAGTTGTGATCACATTGAATTCTGCCTTATTTGAGTATTTTCTGATCTTTTGGAAGGCCAACCATTTATTGAATGTAATTTGGAAGAGGTTGGGTTTTGTAAATCTTTTGGAGTGCTTTTATGTTTAAAACAGGTCAGGAAAAATGTGGGTTTTGTCTAGCAATGTCGTTATGCTGTCAAAATTCTGACTCTGATGGTGTTGCTTAGTAACTTCCTAGGGATTTGGACACAAAAACTAGGGTCATTACACCTTATTTGTAGGTGAGGAGTGATAGCTAAGATATGTAAGAGCATAGTAATTTCCAATGTGAGGTTGAAGAATGATGATAAAGAACTATTTGAAATGAATTATGTTGAAATTCATTAAGAGGGACATGGAAGATAGGGATCTAGATACTAGGAGGAGGATAGCTTGTGAACTTCTTTACAGTTTTTATTCCATGAAATTTCTTTACAGTTTTTTATTGATTCATGGTTTACATTGGCGCTTGTTTTCCTTTTGCTTTGTGTTTCCTATGCAGTTATCTATCTTTTGCTTCTTTGTACAAATGAGGTTAATTTTGATTTTTAATTTGTAGTCAAGTCTCAAATCATATGCTTCTCAAGTGGTTGATGGTACACTTGACATGAACGAGGACGAGATTTTTGTGCAAGTTTTTGGACCAGAGAAGCATGGACGTGTTCGTGGCTATGGGGTAGGTGTTACTCCTTCTGAGTTGTTTGGATCATCTTCCAATGTACGTGATCTTGAACGTCGTCTTAATGAGTCAGAACGACGTCTTCAAGAATCTGAACGACAAAGAAAAGTTGAGGTACAAACCCTCAAAGATCAAATTGTTGAATTAGAAAATCGTTTTGAAGATAGATTCCAAACAATGATGACAGAGATGCGTAAACAATTTGTTATTAATTGA

mRNA sequence

ATGCGCTACAGGAGCCATGGGAGCCAATTCATGAATTTCACAAGCTCAGTCGCCGGATCTTCGCCCTCACGCCAGATCTGCTTCGACCAATCGTCGATTAGATTTCGCCCAGTCGCACGCCGAAGAATCTTTGATGCAAATTGGAAATCGATATTTTCTGATCTTTTGGAAGGCCAACCATTTATTGAATGTAATTTGGAAGAGGTTGGGTTTTGTAAATCTTTTGGAGTGCTTTTATGTTTAAAACAGTCAAGTCTCAAATCATATGCTTCTCAAGTGGTTGATGGTACACTTGACATGAACGAGGACGAGATTTTTGTGCAAGTTTTTGGACCAGAGAAGCATGGACGTGTTCGTGGCTATGGGGTAGGTGTTACTCCTTCTGAGTTGTTTGGATCATCTTCCAATGTACGTGATCTTGAACGTCGTCTTAATGAGTCAGAACGACGTCTTCAAGAATCTGAACGACAAAGAAAAGTTGAGGTACAAACCCTCAAAGATCAAATTGTTGAATTAGAAAATCGTTTTGAAGATAGATTCCAAACAATGATGACAGAGATGCGTAAACAATTTGTTATTAATTGA

Coding sequence (CDS)

ATGCGCTACAGGAGCCATGGGAGCCAATTCATGAATTTCACAAGCTCAGTCGCCGGATCTTCGCCCTCACGCCAGATCTGCTTCGACCAATCGTCGATTAGATTTCGCCCAGTCGCACGCCGAAGAATCTTTGATGCAAATTGGAAATCGATATTTTCTGATCTTTTGGAAGGCCAACCATTTATTGAATGTAATTTGGAAGAGGTTGGGTTTTGTAAATCTTTTGGAGTGCTTTTATGTTTAAAACAGTCAAGTCTCAAATCATATGCTTCTCAAGTGGTTGATGGTACACTTGACATGAACGAGGACGAGATTTTTGTGCAAGTTTTTGGACCAGAGAAGCATGGACGTGTTCGTGGCTATGGGGTAGGTGTTACTCCTTCTGAGTTGTTTGGATCATCTTCCAATGTACGTGATCTTGAACGTCGTCTTAATGAGTCAGAACGACGTCTTCAAGAATCTGAACGACAAAGAAAAGTTGAGGTACAAACCCTCAAAGATCAAATTGTTGAATTAGAAAATCGTTTTGAAGATAGATTCCAAACAATGATGACAGAGATGCGTAAACAATTTGTTATTAATTGA

Protein sequence

MRYRSHGSQFMNFTSSVAGSSPSRQICFDQSSIRFRPVARRRIFDANWKSIFSDLLEGQPFIECNLEEVGFCKSFGVLLCLKQSSLKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLNESERRLQESERQRKVEVQTLKDQIVELENRFEDRFQTMMTEMRKQFVIN

Homology

[Close]

BLAST of Tan0013933 vs. NCBI nr
Match: XP_038904040.1 (uncharacterized protein LOC120090445 [Benincasa hispida])

HSP 1 Score: 164.5 bits (415), Expect = 9.3e-37
Identity = 89/118 (75.42%), Postives = 97/118 (82.20%), Query Frame = 0


Query: 82  KQSSLKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLE 141
           K S LKSYASQV+DGTLDMNEDE FV+VFGPEKHG V GYGVGVTPSELFGSSS +RD E
Sbjct: 63  KMSKLKSYASQVIDGTLDMNEDETFVRVFGPEKHGHVHGYGVGVTPSELFGSSSTIRDHE 122

Query: 142 RRLNESERRLQESERQRK-------VEVQTLKDQIVELENRFEDRFQTMMTEMRKQFV 193
           RRLNESE+RLQE E+QRK       +EV+ LK QI ELENRFEDRFQ MM EM K+FV
Sbjct: 123 RRLNESEQRLQEFEQQRKEFEQQRELEVEVLKRQISELENRFEDRFQKMMAEMCKKFV 180

[Close]

BLAST of Tan0013933 vs. NCBI nr
Match: XP_008457059.1 (PREDICTED: uncharacterized protein LOC103496828 [Cucumis melo])

HSP 1 Score: 107.8 bits (268), Expect = 1.0e-19
Identity = 51/64 (79.69%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 86  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLN 145
           +KSYASQV+DGTLDMN+D+IFVQ+FGPEKH  VRGYGVGV  SELFGSSS V DLERRLN
Sbjct: 122 VKSYASQVIDGTLDMNDDDIFVQIFGPEKHRHVRGYGVGVIHSELFGSSSKVHDLERRLN 181

Query: 146 ESER 150
           ES++
Sbjct: 182 ESKK 185

[Close]

BLAST of Tan0013933 vs. NCBI nr
Match: KAA0056079.1 (bromodomain-containing factor 1-like isoform X2 [Cucumis melo var. makuwa] >TYK01531.1 bromodomain-containing factor 1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 104.8 bits (260), Expect = 8.8e-19
Identity = 50/64 (78.12%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 86  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLN 145
           +KSYASQV+DGTLDMN+D+IFVQ+ GPEKH  VRGYGVGV  SELFGSSS V DLERRLN
Sbjct: 24  VKSYASQVIDGTLDMNDDDIFVQICGPEKHRHVRGYGVGVIHSELFGSSSKVHDLERRLN 83

Query: 146 ESER 150
           ES++
Sbjct: 84  ESKK 87

[Close]

BLAST of Tan0013933 vs. NCBI nr
Match: KAA0049895.1 (uncharacterized protein E6C27_scaffold13G00470 [Cucumis melo var. makuwa] >TYK07633.1 uncharacterized protein E5676_scaffold105G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 103.6 bits (257), Expect = 2.0e-18
Identity = 55/74 (74.32%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 82  KQSSLKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLE 141
           K   LK  ASQV++G LDMNED+IFVQVFGPEKHG VRGYGVGVTP ELF SSS V DLE
Sbjct: 42  KLLELKLNASQVINGILDMNEDDIFVQVFGPEKHGCVRGYGVGVTPYELFRSSSKVHDLE 101

Query: 142 RRLNESERRLQESE 156
             LNE E RL ESE
Sbjct: 102 HGLNEFELRLHESE 115

[Close]

BLAST of Tan0013933 vs. NCBI nr
Match: XP_023893229.1 (uncharacterized protein LOC112005206 [Quercus suber])

HSP 1 Score: 92.4 bits (228), Expect = 4.5e-15
Identity = 45/106 (42.45%), Postives = 78/106 (73.58%), Query Frame = 0


Query: 85  SLKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNV-RDLERR 144
           +L+   +QV +G L M++D++F +VFGPE+HGRVRGYG G+TP++L GSSS++  DLE+R
Sbjct: 348 ALRDLTAQVNEGALHMSQDQMFTEVFGPERHGRVRGYGAGITPTKLKGSSSSIMHDLEKR 407

Query: 145 LNESERRLQESERQRKVEVQTLKDQIVELENRFEDRFQTMMTEMRK 190
           L ESE++  E++ +   +V++LK ++ +L++  E +   M+ + R+
Sbjct: 408 LQESEQKRVEADAEANAKVESLKGEVDQLKSVLEQQASQMVEQSRR 453

[Close]

BLAST of Tan0013933 vs. ExPASy TrEMBL
Match: A0A1S3C480 (uncharacterized protein LOC103496828 OS=Cucumis melo OX=3656 GN=LOC103496828 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 5.0e-20
Identity = 51/64 (79.69%), Postives = 58/64 (90.62%), Query Frame = 0


Query: 86  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLN 145
           +KSYASQV+DGTLDMN+D+IFVQ+FGPEKH  VRGYGVGV  SELFGSSS V DLERRLN
Sbjct: 122 VKSYASQVIDGTLDMNDDDIFVQIFGPEKHRHVRGYGVGVIHSELFGSSSKVHDLERRLN 181

Query: 146 ESER 150
           ES++
Sbjct: 182 ESKK 185

[Close]

BLAST of Tan0013933 vs. ExPASy TrEMBL
Match: A0A5D3BP34 (Bromodomain-containing factor 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00930 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 4.3e-19
Identity = 50/64 (78.12%), Postives = 57/64 (89.06%), Query Frame = 0


Query: 86  LKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLERRLN 145
           +KSYASQV+DGTLDMN+D+IFVQ+ GPEKH  VRGYGVGV  SELFGSSS V DLERRLN
Sbjct: 24  VKSYASQVIDGTLDMNDDDIFVQICGPEKHRHVRGYGVGVIHSELFGSSSKVHDLERRLN 83

Query: 146 ESER 150
           ES++
Sbjct: 84  ESKK 87

[Close]

BLAST of Tan0013933 vs. ExPASy TrEMBL
Match: A0A5A7U8E9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold105G00340 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 9.5e-19
Identity = 55/74 (74.32%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 82  KQSSLKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSNVRDLE 141
           K   LK  ASQV++G LDMNED+IFVQVFGPEKHG VRGYGVGVTP ELF SSS V DLE
Sbjct: 42  KLLELKLNASQVINGILDMNEDDIFVQVFGPEKHGCVRGYGVGVTPYELFRSSSKVHDLE 101

Query: 142 RRLNESERRLQESE 156
             LNE E RL ESE
Sbjct: 102 HGLNEFELRLHESE 115

[Close]

BLAST of Tan0013933 vs. ExPASy TrEMBL
Match: A0A2N9HCE0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37447 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 3.0e-17
Identity = 58/148 (39.19%), Postives = 95/148 (64.19%), Query Frame = 0


Query: 50  SIFSDLLEGQPFIECNLEEVGFCKSFGVLLCLKQS----SLKSYASQVVDGTLDMNEDEI 109
           SIF     G       L E+   +S G+ +  +      +L+S  +QV +G+L M+ED++
Sbjct: 228 SIFEIEKTGHQITRVQLFEITHVQSDGLAVNKETQDSLMTLRSLTTQVNEGSLQMSEDQM 287

Query: 110 FVQVFGPEKHGRVRGYGVGVTPSELFGSSSN-VRDLERRLNESERRLQESERQRKVEVQT 169
           FV+VFGPE+HGRVRGYG GVT ++L+GSSS+ + DLE+RL ESE+   E+  +   +V+ 
Sbjct: 288 FVEVFGPERHGRVRGYGAGVTATKLWGSSSSKINDLEKRLQESEQMRLEANAKANAKVEL 347

Query: 170 LKDQIVELENRFEDRFQTMMTEMRKQFV 193
           L++Q+++L++  E+R     T+M +Q +
Sbjct: 348 LEEQVIQLKDLLEER----STQMEQQAI 371

[Close]

BLAST of Tan0013933 vs. ExPASy TrEMBL
Match: A0A2N9HCP8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40018 PE=4 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 1.2e-16
Identity = 50/109 (45.87%), Postives = 82/109 (75.23%), Query Frame = 0


Query: 85   SLKSYASQVVDGTLDMNEDEIFVQVFGPEKHGRVRGYGVGVTPSELFGSSSN-VRDLERR 144
            +L+S  +QV +G+L M+ED++FV+VFGPE+HGRVRGYG GVT ++L+GSSS+ + DLE+R
Sbjct: 981  TLRSLTTQVNEGSLQMSEDQMFVEVFGPERHGRVRGYGAGVTATKLWGSSSSKINDLEKR 1040

Query: 145  LNESERRLQESERQRKVEVQTLKDQIVELENRFEDRFQTMMTEMRKQFV 193
            L ESE+   E+  +   +V+ L++Q+++L++  E+R     T+M +Q +
Sbjct: 1041 LQESEQMRLEANAKANAKVELLEEQVIQLKDLLEER----STQMEQQAI 1085

The following BLAST results are available for this feature:

BLAST of Tan0013933 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0013933 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904040.1	9.3e-37	75.42	uncharacterized protein LOC120090445 [Benincasa hispida]	[more]
XP_008457059.1	1.0e-19	79.69	PREDICTED: uncharacterized protein LOC103496828 [Cucumis melo]	[more]
KAA0056079.1	8.8e-19	78.13	bromodomain-containing factor 1-like isoform X2 [Cucumis melo var. makuwa] >TYK0...	[more]
KAA0049895.1	2.0e-18	74.32	uncharacterized protein E6C27_scaffold13G00470 [Cucumis melo var. makuwa] >TYK07...	[more]
XP_023893229.1	4.5e-15	42.45	uncharacterized protein LOC112005206 [Quercus suber]	[more]

BLAST of Tan0013933 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C480	5.0e-20	79.69	uncharacterized protein LOC103496828 OS=Cucumis melo OX=3656 GN=LOC103496828 PE=...	[more]
A0A5D3BP34	4.3e-19	78.13	Bromodomain-containing factor 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7U8E9	9.5e-19	74.32	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A2N9HCE0	3.0e-17	39.19	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37447 PE=4 SV=1	[more]
A0A2N9HCP8	1.2e-16	45.87	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS40018 PE=4 SV=1	[more]

BLAST of Tan0013933 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 137..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013933.1	Tan0013933.1	mRNA