Tan0013922 (gene) Snake gourd v1

Overview


Name	Tan0013922
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic
Location	LG04: 85953919 .. 85955809 (-)
RNA-Seq Expression	Tan0013922
Synteny	Tan0013922

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCCTATGGTAGCTGGGTTCATGAATTATGGTCAACAAAGCAAGATTTGAGCGACAAGGTACATTGGTCAAGGTTTCATGATTACTTTATCCCATGCAAATCGTTTGCTCAGAACTATTCAATATCCTTACGAAAAACTAATCGCATCGGAGCGTTTCATGGTCGAATCCATTTTTCATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGTATGTCCTATAGATCTCCCGTTGTTGATTGGAAATTGGAAAGCGGATATTCGAAAGAAACGATTGCTTAATTACGATGTATTGATTTGGGATCTCAGTATATTTTGTGGGTAAGCTGCGTTGAATATTGTCCAACAAATTGTTTATCAATGATGAAGAATATGAACTTTCTACTTATGATCGTCACGAATTAAATTCGAATCAAATTTCTTTGGGTCGTTTACCAATGTCAATAGTTGATGATTATACAATTAGAACAATTTTGAATTCGCCTCCAATTTCAGGTCTAAAATAAGTAAATCCCTTGATTAAAGATTAAAGAGTAATTGGAAATTACTAAGGTTATGTTTTGATCTAAAGAAATGAGGTTTCTTTCGTTTTGTTTGTTTGGTCACTACCTACAAATCCAAACTATTGATGAATGAGAATTGCAACTTAATTTAGATTGAAATCTACTCTACTCTTTCGAGATCAAGACTAAGATTAATACAATAAGCTGTACCTACATGAATTCACACCCTTAAGATTTAATTAGGAATTGGTTATTCATTTTTTCCCGGTCGGATCAATAAGGTCATGAAAAACATTTAGATTGATTTATCTCTTTTTTACTACATATAATGGATTTGCTGGACCGATACATGATTTTCTTGTAGTCTTGTTGGGATCAGTCTTATATTAGGAAGTATGGGAGTACTATTATTTAACAACTCCATTTATTCTCGCTTTTTCGTTGGGACTGGTTCTTGTTTCTATATCCTTATTCTATATTCTAGCAAACGCTTGGTTAGAAGCTCACTGCGCAACTCCTTATTTACGTGGGAGCTATAAATGTTTTAATCATATTTCTTTGTGATGTTCATGAAGGGTTTGAGAATATTCCAAAGATTTGAATCTTTGGACCGTTGGGAGTGGAGTTACTTTTCGAGTTTGTACAAGTATTTTTGTTTCACTAATGACTACTATTGTAGATACGTCATGGTATGGGATTATTTGGACTACAAGATCAAAACAGATTCTAGAACAAGATTTAATAAGTAATAGTCAACAAATTGGAATTTCTTTATCAACATATTTTTTCTTCCATTTGAACTCATTTCGATCATTCTTTTATTTGCTTTGATGGTCAAGAATTGCCGTGGCTCGCTTGAAGAAATCTTTAGTTAGAAATAGCATAAATTCCACTTTGTTCTATGTTATCACACACATTCCCTTCAATTCTATTTGAAGATTGTTTTACATCTAAAATAAAAATTCTTTTATTCGATCGATTACCAATATATTCCCTTGTTTCGCATTTCTTTTTGTCAATTGAATTGAATCTATTAAATTTTTGTTCATATTGAAATGAATCGGAATTGATAAGGAGTTGGTCAATCATGCTCGAACATGTACTTGTTATAAGTGCCTATTTATTTTCTATCGGTATCTATGGATTGATCACGAGCCGAAATATGGTTAGAGCCCTTATGTGTCTTGAGCTTATATGAATGCGATTAATATGAATTTCGTAACATTTTTCGATTTTTTTATAGTCGCAGAGAATATTTTCTCAATTTTTGTTATATTTATTGCATGTATTAAGCATTTATTGGCCCAAACTATTGTTTCGTCAATTTATCGTAATGAGAAAAGAAACTCGTATCAATCAATCGAATTTGTTGAATAAGTAG

mRNA sequence

ATGTTCCCTATGGTAGCTGGGTTCATGAATTATGGTCAACAAAGTTTCATGATTACTTTATCCCATGCAAATCGTTTGCTCAGAACTATTCAATATCCTTACGAAAAACTAATCGCATCGGAGCTATGTGTTCGTGTATGTCCTATAGATCTCCCGTTGTTGATTGGAAATTGGAAAGCGGATATTCGAAAGAAACGATTGCTTAATTACGATGTATTGATTTGGGATCTCAGTATATTTTGTGGAATATTCCAAAGATTTGAATCTTTGGACCGTTGGGAGTGGAGTTACTTTTCGAGTTTAATTGCCGTGGCTCGCTTGAAGAAATCTTTAGTTAGAAATAGCATAAATTCCACTTTGAGTTGGTCAATCATGCTCGAACATGTACTTGTTATAAGTGCCTATTTATTTTCTATCGGTATCTATGGATTGATCACGAGCCGAAATATGGTTAGAGCCCTTATAATATTTTCTCAATTTTTGTTATATTTATTGCATGTATTAAGCATTTATTGGCCCAAACTATTGTTTCGTCAATTTATCGTAATGAGAAAAGAAACTCGTATCAATCAATCGAATTTGTTGAATAAGTAG

Coding sequence (CDS)

ATGTTCCCTATGGTAGCTGGGTTCATGAATTATGGTCAACAAAGTTTCATGATTACTTTATCCCATGCAAATCGTTTGCTCAGAACTATTCAATATCCTTACGAAAAACTAATCGCATCGGAGCTATGTGTTCGTGTATGTCCTATAGATCTCCCGTTGTTGATTGGAAATTGGAAAGCGGATATTCGAAAGAAACGATTGCTTAATTACGATGTATTGATTTGGGATCTCAGTATATTTTGTGGAATATTCCAAAGATTTGAATCTTTGGACCGTTGGGAGTGGAGTTACTTTTCGAGTTTAATTGCCGTGGCTCGCTTGAAGAAATCTTTAGTTAGAAATAGCATAAATTCCACTTTGAGTTGGTCAATCATGCTCGAACATGTACTTGTTATAAGTGCCTATTTATTTTCTATCGGTATCTATGGATTGATCACGAGCCGAAATATGGTTAGAGCCCTTATAATATTTTCTCAATTTTTGTTATATTTATTGCATGTATTAAGCATTTATTGGCCCAAACTATTGTTTCGTCAATTTATCGTAATGAGAAAAGAAACTCGTATCAATCAATCGAATTTGTTGAATAAGTAG

Protein sequence

MFPMVAGFMNYGQQSFMITLSHANRLLRTIQYPYEKLIASELCVRVCPIDLPLLIGNWKADIRKKRLLNYDVLIWDLSIFCGIFQRFESLDRWEWSYFSSLIAVARLKKSLVRNSINSTLSWSIMLEHVLVISAYLFSIGIYGLITSRNMVRALIIFSQFLLYLLHVLSIYWPKLLFRQFIVMRKETRINQSNLLNK

Homology

[Close]

BLAST of Tan0013922 vs. ExPASy Swiss-Prot
Match: Q09FQ6 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Nandina domestica OX=41776 GN=ndhI PE=3 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.1e-22
Identity = 75/165 (45.45%), Postives = 92/165 (55.76%), Query Frame = 0


Query: 1   MFPMVAGFMNYGQ----------QSFMITLSHANRLLRTIQYPYEKLIAS---------- 60
           MFPMV GFMNYGQ          QSFMITLSHANRL  TIQYPYEKLI S          
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  -------ELCVRVCPIDLPLLIGNWKADIRKKRLLNYDVLIWDLSIFCG----------- 120
                  E+CVRVCPIDLP++    + DIRKKRLLNY +  + + IFCG           
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSI-DFGICIFCGNCVEYCPTNCL 120

[Close]

BLAST of Tan0013922 vs. ExPASy Swiss-Prot
Match: A1XG09 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Nuphar advena OX=77108 GN=ndhI PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 5.2e-22
Identity = 75/165 (45.45%), Postives = 91/165 (55.15%), Query Frame = 0


Query: 1   MFPMVAGFMNYGQ----------QSFMITLSHANRLLRTIQYPYE--------------- 60
           MFPMV GFMNYGQ          QSFMITLSHANRL  TIQYPYE               
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKSITSERFRGRIHFE 60

Query: 61  --KLIASELCVRVCPIDLPLLIGNWKADIRKKRLLNYDVLIWDLSIFCG----------- 120
             K IA E+CVRVCPIDLP++    + DIRKKRLLNY +  + + IFCG           
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWRLETDIRKKRLLNYSI-DFGICIFCGNCVEYCPTNCL 120

[Close]

BLAST of Tan0013922 vs. ExPASy Swiss-Prot
Match: Q6EVZ6 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Nymphaea alba OX=34301 GN=ndhI PE=3 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 5.2e-22
Identity = 75/165 (45.45%), Postives = 91/165 (55.15%), Query Frame = 0


Query: 1   MFPMVAGFMNYGQ----------QSFMITLSHANRLLRTIQYPYE--------------- 60
           MFPMV GFMNYGQ          QSFMITLSHANRL  TIQYPYE               
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKSITSERFRGRIHFE 60

Query: 61  --KLIASELCVRVCPIDLPLLIGNWKADIRKKRLLNYDVLIWDLSIFCG----------- 120
             K IA E+CVRVCPIDLP++    + DIRKKRLLNY +  + + IFCG           
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWRLETDIRKKRLLNYSI-DFGICIFCGNCVEYCPTNCL 120

[Close]

BLAST of Tan0013922 vs. ExPASy Swiss-Prot
Match: A6MMH3 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Chloranthus spicatus OX=13006 GN=ndhI PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.0e-22
Identity = 73/170 (42.94%), Postives = 93/170 (54.71%), Query Frame = 0


Query: 1   MFPMVAGFMNYGQ----------QSFMITLSHANRLLRTIQYPYE--------------- 60
           MFPMV GFMNYGQ          QSFMITLSHANRL  TIQYPYE               
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKSITSERFRGRIHFE 60

Query: 61  --KLIASELCVRVCPIDLPLLIGNWKADIRKKRLLNYDVLIWDLSIFCG----------- 120
             K IA E+CVRVCPIDLP++    + DIRKKRLLNY +  + + IFCG           
Sbjct: 61  LDKCIACEVCVRVCPIDLPVVDWRLETDIRKKRLLNYSI-DFGICIFCGNCVEYCPTNCL 120

Query: 121 -IFQRFE--SLDRWEWSYFSSLIAVARLKKSLVRNSINSTLSWSIMLEHV 130
            + + +E  + DR E +Y  + IA+ RL  S++ +    T+  S  ++ V
Sbjct: 121 SMTEEYELSTYDRHELNY--NQIALGRLPMSVIEDYTIQTILNSTQIQIV 167

[Close]

BLAST of Tan0013922 vs. ExPASy Swiss-Prot
Match: Q0ZIW4 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhI PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 9.0e-22
Identity = 70/153 (45.75%), Postives = 87/153 (56.86%), Query Frame = 0


Query: 1   MFPMVAGFMNYGQ----------QSFMITLSHANRLLRTIQYPYEKLIAS---------- 60
           MFPMV GFMNYGQ          QSFMITLSHANRL  TIQYPYEKLI S          
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  -------ELCVRVCPIDLPLLIGNWKADIRKKRLLNYDVLIWDLSIFCG----------- 113
                  E+CVRVCPIDLP++    + DIRKK+LLNY +  + + IFCG           
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKQLLNYSI-DFGICIFCGNCVEYCPTNCL 120

[Close]

BLAST of Tan0013922 vs. NCBI nr
Match: YP_009517958.1 (NADH-plastoquinone oxidoreductase subunit I [Anemone trullifolia] >AXP20365.1 NADH-plastoquinone oxidoreductase subunit I [Anemone trullifolia])

HSP 1 Score: 109.8 bits (273), Expect = 2.8e-20
Identity = 75/168 (44.64%), Postives = 95/168 (56.55%), Query Frame = 0


Query: 1   MFPMVAGFMNYGQ----------QSFMITLSHANRLLRTIQYPYEKLIAS---------- 60
           MFPMV GFMNYGQ          QSFMITLSHANRL  TIQYPYEKLI S          
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  -------ELCVRVCPIDLPLLIGNWKADIRKKRLLNYDVLIWDLSIFCG----------- 120
                  E+CVRVCPIDLP++    + DIRKKRLLNY +  + + IFCG           
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSI-DFGICIFCGNCIEYCPTNCL 120

Query: 121 -IFQRFE--SLDRWEWSYFSSLIAVARLKKSLVRNSINSTLSWSIMLE 128
            + + +E  + DR E +Y  + IA+ RL  S++ +SI  T+  S  ++
Sbjct: 121 SMTEEYELSTYDRHELNY--NQIALGRLPMSVIGDSIIRTVMNSTQIK 165

[Close]

BLAST of Tan0013922 vs. NCBI nr
Match: YP_009536945.1 (NADH-plastoquinone oxidoreductase subunit I [Clematis acerifolia] >ASA46655.1 NADH-plastoquinone oxidoreductase subunit I [Clematis acerifolia])

HSP 1 Score: 109.4 bits (272), Expect = 3.6e-20
Identity = 74/168 (44.05%), Postives = 95/168 (56.55%), Query Frame = 0


Query: 1   MFPMVAGFMNYGQ----------QSFMITLSHANRLLRTIQYPYEKLIAS---------- 60
           MFPMV GFMNYGQ          QSFMITLSHANRL  TIQYPYEKLI S          
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  -------ELCVRVCPIDLPLLIGNWKADIRKKRLLNYDVLIWDLSIFCG----------- 120
                  E+CVRVCPIDLP++   ++ DIRKKRLLNY +  + + IFCG           
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKFETDIRKKRLLNYSI-DFGICIFCGNCVEYCPTNCL 120

Query: 121 -IFQRFE--SLDRWEWSYFSSLIAVARLKKSLVRNSINSTLSWSIMLE 128
            + + +E  + DR E +Y  + IA+ RL  S++ +S   T+  S  ++
Sbjct: 121 SMTEEYELSTYDRHELNY--NQIALGRLPMSVIGDSTIRTIRNSTQIK 165

[Close]

BLAST of Tan0013922 vs. NCBI nr
Match: YP_009975286.1 (NADH-plastoquinone oxidoreductase subunit I [Drypetes hainanensis] >QNK04627.1 NADH-plastoquinone oxidoreductase subunit I [Drypetes hainanensis])

HSP 1 Score: 109.4 bits (272), Expect = 3.6e-20
Identity = 72/153 (47.06%), Postives = 89/153 (58.17%), Query Frame = 0


Query: 1   MFPMVAGFMNYGQ----------QSFMITLSHANRLLRTIQYPYEKLIAS---------- 60
           MFPMV GFMNYGQ          QSFMITLSHANRL  TIQYPYEKLI S          
Sbjct: 21  MFPMVTGFMNYGQQSIRAARYIGQSFMITLSHANRLPITIQYPYEKLITSERFRGRIHFE 80

Query: 61  -------ELCVRVCPIDLPLLIGNWKADIRKKRLLNYDVLIWDLSIFCG----------- 113
                  E+CVRVCPIDLP++   ++ DIRKKRLLNY++  + + IFCG           
Sbjct: 81  FDKCIACEVCVRVCPIDLPVVDWEFETDIRKKRLLNYNI-DFGICIFCGNCVEYCPTNCL 140

[Close]

BLAST of Tan0013922 vs. NCBI nr
Match: AFU94256.1 (NdhI, partial [Putranjiva roxburghii])

HSP 1 Score: 109.4 bits (272), Expect = 3.6e-20
Identity = 72/153 (47.06%), Postives = 89/153 (58.17%), Query Frame = 0


Query: 1   MFPMVAGFMNYGQ----------QSFMITLSHANRLLRTIQYPYEKLIAS---------- 60
           MFPMV GFMNYGQ          QSFMITLSHANRL  TIQYPYEKLI S          
Sbjct: 1   MFPMVTGFMNYGQQSIRAARYIGQSFMITLSHANRLPITIQYPYEKLITSERFRGRIHFE 60

Query: 61  -------ELCVRVCPIDLPLLIGNWKADIRKKRLLNYDVLIWDLSIFCG----------- 113
                  E+CVRVCPIDLP++   ++ DIRKKRLLNY++  + + IFCG           
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWEFETDIRKKRLLNYNI-DFGICIFCGNCVEYCPTNCL 120

[Close]

BLAST of Tan0013922 vs. NCBI nr
Match: YP_009975361.1 (NADH-plastoquinone oxidoreductase subunit I [Drypetes indica] >QNK04702.1 NADH-plastoquinone oxidoreductase subunit I [Drypetes indica])

HSP 1 Score: 109.4 bits (272), Expect = 3.6e-20
Identity = 72/153 (47.06%), Postives = 89/153 (58.17%), Query Frame = 0


Query: 1   MFPMVAGFMNYGQ----------QSFMITLSHANRLLRTIQYPYEKLIAS---------- 60
           MFPMV GFMNYGQ          QSFMITLSHANRL  TIQYPYEKLI S          
Sbjct: 21  MFPMVTGFMNYGQQSIRAARYIGQSFMITLSHANRLPITIQYPYEKLITSERFRGRIHFE 80

Query: 61  -------ELCVRVCPIDLPLLIGNWKADIRKKRLLNYDVLIWDLSIFCG----------- 113
                  E+CVRVCPIDLP++   ++ DIRKKRLLNY++  + + IFCG           
Sbjct: 81  FDKCIACEVCVRVCPIDLPVVDWEFETDIRKKRLLNYNI-DFGICIFCGNCVEYCPTNCL 140

[Close]

BLAST of Tan0013922 vs. ExPASy TrEMBL
Match: A0A346IN45 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Anemone trullifolia OX=174170 GN=ndhI PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.3e-20
Identity = 75/168 (44.64%), Postives = 95/168 (56.55%), Query Frame = 0


Query: 1   MFPMVAGFMNYGQ----------QSFMITLSHANRLLRTIQYPYEKLIAS---------- 60
           MFPMV GFMNYGQ          QSFMITLSHANRL  TIQYPYEKLI S          
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  -------ELCVRVCPIDLPLLIGNWKADIRKKRLLNYDVLIWDLSIFCG----------- 120
                  E+CVRVCPIDLP++    + DIRKKRLLNY +  + + IFCG           
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSI-DFGICIFCGNCIEYCPTNCL 120

Query: 121 -IFQRFE--SLDRWEWSYFSSLIAVARLKKSLVRNSINSTLSWSIMLE 128
            + + +E  + DR E +Y  + IA+ RL  S++ +SI  T+  S  ++
Sbjct: 121 SMTEEYELSTYDRHELNY--NQIALGRLPMSVIGDSIIRTVMNSTQIK 165

[Close]

BLAST of Tan0013922 vs. ExPASy TrEMBL
Match: A0A7G8QD44 (NADH-quinone oxidoreductase subunit I OS=Drypetes indica OX=1679348 GN=ndhI PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.8e-20
Identity = 72/153 (47.06%), Postives = 89/153 (58.17%), Query Frame = 0


Query: 1   MFPMVAGFMNYGQ----------QSFMITLSHANRLLRTIQYPYEKLIAS---------- 60
           MFPMV GFMNYGQ          QSFMITLSHANRL  TIQYPYEKLI S          
Sbjct: 21  MFPMVTGFMNYGQQSIRAARYIGQSFMITLSHANRLPITIQYPYEKLITSERFRGRIHFE 80

Query: 61  -------ELCVRVCPIDLPLLIGNWKADIRKKRLLNYDVLIWDLSIFCG----------- 113
                  E+CVRVCPIDLP++   ++ DIRKKRLLNY++  + + IFCG           
Sbjct: 81  FDKCIACEVCVRVCPIDLPVVDWEFETDIRKKRLLNYNI-DFGICIFCGNCVEYCPTNCL 140

[Close]

BLAST of Tan0013922 vs. ExPASy TrEMBL
Match: A0A3G1IBX2 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Clematis acerifolia OX=748687 GN=ndhI PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.8e-20
Identity = 74/168 (44.05%), Postives = 95/168 (56.55%), Query Frame = 0


Query: 1   MFPMVAGFMNYGQ----------QSFMITLSHANRLLRTIQYPYEKLIAS---------- 60
           MFPMV GFMNYGQ          QSFMITLSHANRL  TIQYPYEKLI S          
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  -------ELCVRVCPIDLPLLIGNWKADIRKKRLLNYDVLIWDLSIFCG----------- 120
                  E+CVRVCPIDLP++   ++ DIRKKRLLNY +  + + IFCG           
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKFETDIRKKRLLNYSI-DFGICIFCGNCVEYCPTNCL 120

Query: 121 -IFQRFE--SLDRWEWSYFSSLIAVARLKKSLVRNSINSTLSWSIMLE 128
            + + +E  + DR E +Y  + IA+ RL  S++ +S   T+  S  ++
Sbjct: 121 SMTEEYELSTYDRHELNY--NQIALGRLPMSVIGDSTIRTIRNSTQIK 165

[Close]

BLAST of Tan0013922 vs. ExPASy TrEMBL
Match: A0A7G8QDJ5 (NADH-quinone oxidoreductase subunit I OS=Drypetes longifolia OX=1504425 GN=ndhI PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.8e-20
Identity = 72/153 (47.06%), Postives = 89/153 (58.17%), Query Frame = 0


Query: 1   MFPMVAGFMNYGQ----------QSFMITLSHANRLLRTIQYPYEKLIAS---------- 60
           MFPMV GFMNYGQ          QSFMITLSHANRL  TIQYPYEKLI S          
Sbjct: 21  MFPMVTGFMNYGQQSIRAARYIGQSFMITLSHANRLPITIQYPYEKLITSERFRGRIHFE 80

Query: 61  -------ELCVRVCPIDLPLLIGNWKADIRKKRLLNYDVLIWDLSIFCG----------- 113
                  E+CVRVCPIDLP++   ++ DIRKKRLLNY++  + + IFCG           
Sbjct: 81  FDKCIACEVCVRVCPIDLPVVDWEFETDIRKKRLLNYNI-DFGICIFCGNCVEYCPTNCL 140

[Close]

BLAST of Tan0013922 vs. ExPASy TrEMBL
Match: A0A7G8QDS1 (NADH-quinone oxidoreductase subunit I OS=Sibangea similis OX=1317885 GN=ndhI PE=3 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.8e-20
Identity = 72/153 (47.06%), Postives = 89/153 (58.17%), Query Frame = 0


Query: 1   MFPMVAGFMNYGQ----------QSFMITLSHANRLLRTIQYPYEKLIAS---------- 60
           MFPMV GFMNYGQ          QSFMITLSHANRL  TIQYPYEKLI S          
Sbjct: 21  MFPMVTGFMNYGQQSIRAARYIGQSFMITLSHANRLPITIQYPYEKLITSERFRGRIHFE 80

Query: 61  -------ELCVRVCPIDLPLLIGNWKADIRKKRLLNYDVLIWDLSIFCG----------- 113
                  E+CVRVCPIDLP++   ++ DIRKKRLLNY++  + + IFCG           
Sbjct: 81  FDKCIACEVCVRVCPIDLPVVDWEFETDIRKKRLLNYNI-DFGICIFCGNCVEYCPTNCL 140

[Close]

BLAST of Tan0013922 vs. TAIR 10
Match: ATCG01090.1 (NADPH dehydrogenases )

HSP 1 Score: 100.1 bits (248), Expect = 2.0e-21
Identity = 66/153 (43.14%), Postives = 82/153 (53.59%), Query Frame = 0


Query: 1   MFPMVAGFMNYGQQS----------FMITLSHANRLLRTIQYPYEKLIAS---------- 60
           M PM+ GFMNYGQQ+          FMITLSH NRL  TIQYPYEKLI S          
Sbjct: 1   MLPMITGFMNYGQQTLRAARYIGQGFMITLSHTNRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  -------ELCVRVCPIDLPLLIGNWKADIRKKRLLNYDVLIWDLSIFCGIF--------- 113
                  E+CVRVCPIDLP++    + +IRKKRLLNY +  + + IFCG           
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETNIRKKRLLNYSI-DFGICIFCGNCVEYCPTNCL 120

[Close]

BLAST of Tan0013922 vs. TAIR 10
Match: ATCG01070.1 (NADH-ubiquinone/plastoquinone oxidoreductase chain 4L )

HSP 1 Score: 53.5 bits (127), Expect = 2.2e-07
Identity = 44/101 (43.56%), Postives = 55/101 (54.46%), Query Frame = 0


Query: 124 IMLEHVLVISAYLFSIGIYGLITSRNMVRAL--------------IIFSQFL-------- 183
           ++LEHVLV+SAYLF IG+YGLITSRNMVRAL              + FS F         
Sbjct: 1   MILEHVLVLSAYLFLIGLYGLITSRNMVRALMCLELILNAVNMNFVTFSDFFDNSQLKGE 60

Query: 184 LYLLHVLSIYWPKLLFRQFIVM-----RKETRINQSNLLNK 198
           ++ + V++I   +      IV      RK  RINQS LLNK
Sbjct: 61  IFCIFVIAIAAAEAAIGLAIVSSIYRNRKSIRINQSTLLNK 101

The following BLAST results are available for this feature:

BLAST of Tan0013922 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q09FQ6	1.1e-22	45.45	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Nandina domestica OX=...	[more]
A1XG09	5.2e-22	45.45	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Nuphar advena OX=7710...	[more]
Q6EVZ6	5.2e-22	45.45	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Nymphaea alba OX=3430...	[more]
A6MMH3	9.0e-22	42.94	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Chloranthus spicatus ...	[more]
Q0ZIW4	9.0e-22	45.75	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Vitis vinifera OX=297...	[more]

BLAST of Tan0013922 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009517958.1	2.8e-20	44.64	NADH-plastoquinone oxidoreductase subunit I [Anemone trullifolia] >AXP20365.1 NA...	[more]
YP_009536945.1	3.6e-20	44.05	NADH-plastoquinone oxidoreductase subunit I [Clematis acerifolia] >ASA46655.1 NA...	[more]
YP_009975286.1	3.6e-20	47.06	NADH-plastoquinone oxidoreductase subunit I [Drypetes hainanensis] >QNK04627.1 N...	[more]
AFU94256.1	3.6e-20	47.06	NdhI, partial [Putranjiva roxburghii]	[more]
YP_009975361.1	3.6e-20	47.06	NADH-plastoquinone oxidoreductase subunit I [Drypetes indica] >QNK04702.1 NADH-p...	[more]

BLAST of Tan0013922 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A346IN45	1.3e-20	44.64	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Anemone trullifolia O...	[more]
A0A7G8QD44	1.8e-20	47.06	NADH-quinone oxidoreductase subunit I OS=Drypetes indica OX=1679348 GN=ndhI PE=3...	[more]
A0A3G1IBX2	1.8e-20	44.05	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Clematis acerifolia O...	[more]
A0A7G8QDJ5	1.8e-20	47.06	NADH-quinone oxidoreductase subunit I OS=Drypetes longifolia OX=1504425 GN=ndhI ...	[more]
A0A7G8QDS1	1.8e-20	47.06	NADH-quinone oxidoreductase subunit I OS=Sibangea similis OX=1317885 GN=ndhI PE=...	[more]

BLAST of Tan0013922 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01090.1	2.0e-21	43.14	NADPH dehydrogenases	[more]
ATCG01070.1	2.2e-07	43.56	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.287.3510		coord: 123..174 e-value: 4.3E-5 score: 25.2
None	No IPR available	PANTHER	PTHR47275:SF1	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT I, CHLOROPLASTIC	coord: 1..41
None	No IPR available	PANTHER	PTHR47275:SF1	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT I, CHLOROPLASTIC	coord: 38..82
IPR004497	NADH-plastoquinone oxidoreductase, subunit I	PANTHER	PTHR47275	FAMILY NOT NAMED	coord: 38..82
IPR004497	NADH-plastoquinone oxidoreductase, subunit I	PANTHER	PTHR47275	FAMILY NOT NAMED	coord: 1..41

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013922.1	Tan0013922.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005622	intracellular anatomical structure
molecular_function	GO:0005488	binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity