Tan0013882 (gene) Snake gourd v1

Overview
NameTan0013882
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionmajor pollen allergen Ole e 6-like
LocationLG06: 44077213 .. 44077558 (+)
RNA-Seq ExpressionTan0013882
SyntenyTan0013882
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAAGAAGATGATTGCAGTGTTTCTGATGTGCATTGTCGTGATGGCTACAGTGCAAGTTTTCACTGCTAATGCTGAGGACAAGGAGGCCAAATTCGACGCCAGGTTCAAATCTTGCTTCAAAAATTGTGAGAAGGAATGCCTTGACAAGGGCAGTGGTCAAAGCTTCTGTGAAGTTAAGTGTGATGAAGATTGTGGTGAAAAGGAAGTTGCAGGTGCTCTTTCTTGTTTTTAATCTCATTTCTTCTTCTAAAACCAATTATTCATTATTTTTTTTACTCATACTAATTTAATTTTTTTTTATTTGTTTTGCAGATAAGCTTCACATCAACATAGCACTTTGA

mRNA sequence

ATGGCAAAGAAGATGATTGCAGTGTTTCTGATGTGCATTGTCGTGATGGCTACAGTGCAAGTTTTCACTGCTAATGCTGAGGACAAGGAGGCCAAATTCGACGCCAGGTTCAAATCTTGCTTCAAAAATTGTGAGAAGGAATGCCTTGACAAGGGCAGTGGTCAAAGCTTCTGTGAAGTTAAGTGTGATGAAGATTGTGGTGAAAAGGAAGTTGCAGATAAGCTTCACATCAACATAGCACTTTGA

Coding sequence (CDS)

ATGGCAAAGAAGATGATTGCAGTGTTTCTGATGTGCATTGTCGTGATGGCTACAGTGCAAGTTTTCACTGCTAATGCTGAGGACAAGGAGGCCAAATTCGACGCCAGGTTCAAATCTTGCTTCAAAAATTGTGAGAAGGAATGCCTTGACAAGGGCAGTGGTCAAAGCTTCTGTGAAGTTAAGTGTGATGAAGATTGTGGTGAAAAGGAAGTTGCAGATAAGCTTCACATCAACATAGCACTTTGA

Protein sequence

MAKKMIAVFLMCIVVMATVQVFTANAEDKEAKFDARFKSCFKNCEKECLDKGSGQSFCEVKCDEDCGEKEVADKLHINIAL
Homology
BLAST of Tan0013882 vs. ExPASy Swiss-Prot
Match: O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.4e-08
Identity = 24/42 (57.14%), Postives = 32/42 (76.19%), Query Frame = 0

Query: 34 DARFKSCFKNCEKECLDKGSGQSFCEVKCDEDCGEKEVADKL 76
          +A+FK C+  C KEC DKG+G +FCE+KCD DC  K+V +KL
Sbjct: 2  EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKL 43

BLAST of Tan0013882 vs. NCBI nr
Match: XP_008456958.1 (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa] >TYJ96804.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 123.6 bits (309), Expect = 7.6e-25
Identity = 61/83 (73.49%), Postives = 71/83 (85.54%), Query Frame = 0

Query: 1  MAKKMIAVFLMCIVVMATVQVFTANAEDK----EAKFDARFKSCFKNCEKECLDKGSGQS 60
          MAKKMIA+FLMCIVV+A +Q  +AN ED+    EAKFDA++KSCFK CEKECL+ GSGQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCGEKEVADKLHINI 80
          +CEVKCDEDC EKEVADKLHI +
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIEL 83

BLAST of Tan0013882 vs. NCBI nr
Match: XP_038906682.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 121.7 bits (304), Expect = 2.9e-24
Identity = 62/82 (75.61%), Postives = 69/82 (84.15%), Query Frame = 0

Query: 1  MAKKMIAVFLMCIVVMATVQVFTANAE--DKEAKFDARFKSCFKNCEKECLDKGSGQSFC 60
          MAKKMIAVFLMCIVVMA +Q  TAN E    EAKFDA++KSC++ CEKECL+KG+GQSFC
Sbjct: 1  MAKKMIAVFLMCIVVMAALQFTTANEEVAKYEAKFDAKYKSCYETCEKECLEKGNGQSFC 60

Query: 61 EVKCDEDCGEKEVADKLHINIA 81
          EVKCDEDC EKE ADKLHI  A
Sbjct: 61 EVKCDEDCDEKETADKLHIKPA 82

BLAST of Tan0013882 vs. NCBI nr
Match: XP_038875643.1 (major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 119.0 bits (297), Expect = 1.9e-23
Identity = 61/81 (75.31%), Postives = 69/81 (85.19%), Query Frame = 0

Query: 1  MAKKMIAVFLMCIVVMATVQVFTANAE-DK-EAKFDARFKSCFKNCEKECLDKGSGQSFC 60
          MAKKMIAVF MCIVVMA +Q  TAN E DK EAKFDA++KSC++ CEKECL+ GSGQ+FC
Sbjct: 1  MAKKMIAVFFMCIVVMAALQFATANEEVDKYEAKFDAKYKSCYETCEKECLENGSGQTFC 60

Query: 61 EVKCDEDCGEKEVADKLHINI 80
          EVKCDEDC EKE ADKLHI +
Sbjct: 61 EVKCDEDCDEKEKADKLHIEL 81

BLAST of Tan0013882 vs. NCBI nr
Match: XP_038891517.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 118.2 bits (295), Expect = 3.2e-23
Identity = 59/82 (71.95%), Postives = 69/82 (84.15%), Query Frame = 0

Query: 1  MAKKMIAVFLMCIVVMATVQVFTANAED---KEAKFDARFKSCFKNCEKECLDKGSGQSF 60
          MAKKM+AVFLMCIVV+A +Q  TAN ++    EAKFDA++KSC++ CEKECL  GSGQSF
Sbjct: 1  MAKKMMAVFLMCIVVVAALQFATANEDEVTKYEAKFDAKYKSCYETCEKECLANGSGQSF 60

Query: 61 CEVKCDEDCGEKEVADKLHINI 80
          CEVKCDEDC EKEVADKLHI +
Sbjct: 61 CEVKCDEDCDEKEVADKLHIKL 82

BLAST of Tan0013882 vs. NCBI nr
Match: XP_004146471.1 (major pollen allergen Ole e 6 [Cucumis sativus] >KGN50739.1 hypothetical protein Csa_005859 [Cucumis sativus])

HSP 1 Score: 114.8 bits (286), Expect = 3.5e-22
Identity = 58/82 (70.73%), Postives = 66/82 (80.49%), Query Frame = 0

Query: 1  MAKKMIAVFLMCIVVMATVQVFTANAED---KEAKFDARFKSCFKNCEKECLDKGSGQSF 60
          MA KMIA+FLMCIVV+A +Q   AN ED    EAKFDA++KSCF+ CEKECL  GSGQS+
Sbjct: 1  MANKMIALFLMCIVVVAALQFANANKEDVAKYEAKFDAKYKSCFETCEKECLRYGSGQSY 60

Query: 61 CEVKCDEDCGEKEVADKLHINI 80
          CEVKCDEDC EKE ADKLHI +
Sbjct: 61 CEVKCDEDCDEKEAADKLHIEL 82

BLAST of Tan0013882 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.7e-25
Identity = 61/83 (73.49%), Postives = 71/83 (85.54%), Query Frame = 0

Query: 1  MAKKMIAVFLMCIVVMATVQVFTANAEDK----EAKFDARFKSCFKNCEKECLDKGSGQS 60
          MAKKMIA+FLMCIVV+A +Q  +AN ED+    EAKFDA++KSCFK CEKECL+ GSGQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCGEKEVADKLHINI 80
          +CEVKCDEDC EKEVADKLHI +
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIEL 83

BLAST of Tan0013882 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 3.7e-25
Identity = 61/83 (73.49%), Postives = 71/83 (85.54%), Query Frame = 0

Query: 1  MAKKMIAVFLMCIVVMATVQVFTANAEDK----EAKFDARFKSCFKNCEKECLDKGSGQS 60
          MAKKMIA+FLMCIVV+A +Q  +AN ED+    EAKFDA++KSCFK CEKECL+ GSGQS
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 FCEVKCDEDCGEKEVADKLHINI 80
          +CEVKCDEDC EKEVADKLHI +
Sbjct: 61 YCEVKCDEDCNEKEVADKLHIEL 83

BLAST of Tan0013882 vs. ExPASy TrEMBL
Match: A0A0A0KPA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.7e-22
Identity = 58/82 (70.73%), Postives = 66/82 (80.49%), Query Frame = 0

Query: 1  MAKKMIAVFLMCIVVMATVQVFTANAED---KEAKFDARFKSCFKNCEKECLDKGSGQSF 60
          MA KMIA+FLMCIVV+A +Q   AN ED    EAKFDA++KSCF+ CEKECL  GSGQS+
Sbjct: 1  MANKMIALFLMCIVVVAALQFANANKEDVAKYEAKFDAKYKSCFETCEKECLRYGSGQSY 60

Query: 61 CEVKCDEDCGEKEVADKLHINI 80
          CEVKCDEDC EKE ADKLHI +
Sbjct: 61 CEVKCDEDCDEKEAADKLHIEL 82

BLAST of Tan0013882 vs. ExPASy TrEMBL
Match: A0A6J1JXL5 (major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488756 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.2e-22
Identity = 56/83 (67.47%), Postives = 69/83 (83.13%), Query Frame = 0

Query: 1  MAKKMIAVFLMCIVVMATVQVFTANAEDKEAKFDARFKS----CFKNCEKECLDKGSGQS 60
          MAKKMIAV L+CIVVMA +QV +A    KEAK++A+F++    C++ CEKECL+KG+GQS
Sbjct: 1  MAKKMIAVLLVCIVVMAALQVSSATESVKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60

Query: 61 FCEVKCDEDCGEKEVADKLHINI 80
          FCEVKCDEDCGEKE ADKLHI +
Sbjct: 61 FCEVKCDEDCGEKEAADKLHIKV 83

BLAST of Tan0013882 vs. ExPASy TrEMBL
Match: A0A6J1EQ21 (major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354 PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 5.0e-22
Identity = 55/83 (66.27%), Postives = 69/83 (83.13%), Query Frame = 0

Query: 1  MAKKMIAVFLMCIVVMATVQVFTANAEDKEAKFDARFKS----CFKNCEKECLDKGSGQS 60
          MAKKMIAV L+CIVV+A +QV +A    KEAK++A+F++    C++ CEKECL+KG+GQS
Sbjct: 1  MAKKMIAVLLVCIVVVAALQVSSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQS 60

Query: 61 FCEVKCDEDCGEKEVADKLHINI 80
          FCEVKCDEDCGEKE ADKLHI +
Sbjct: 61 FCEVKCDEDCGEKEAADKLHIKV 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O241721.4e-0857.14Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
XP_008456958.17.6e-2573.49PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major... [more]
XP_038906682.12.9e-2475.61major pollen allergen Ole e 6-like [Benincasa hispida][more]
XP_038875643.11.9e-2375.31major pollen allergen Ole e 6-like [Benincasa hispida] >XP_038906512.1 major pol... [more]
XP_038891517.13.2e-2371.95major pollen allergen Ole e 6-like [Benincasa hispida][more]
XP_004146471.13.5e-2270.73major pollen allergen Ole e 6 [Cucumis sativus] >KGN50739.1 hypothetical protein... [more]
Match NameE-valueIdentityDescription
A0A5D3BCS23.7e-2573.49Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56... [more]
A0A1S3C5303.7e-2573.49major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ... [more]
A0A0A0KPA71.7e-2270.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222980 PE=4 SV=1[more]
A0A6J1JXL52.2e-2267.47major pollen allergen Ole e 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488756 P... [more]
A0A6J1EQ215.0e-2266.27major pollen allergen Ole e 6-like OS=Cucurbita moschata OX=3662 GN=LOC111436354... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036466Pollen allergen ole e 6 superfamilyGENE3D1.10.287.720Pollen allergen ole e 6coord: 34..78
e-value: 5.4E-17
score: 63.1
IPR036466Pollen allergen ole e 6 superfamilySUPERFAMILY111388Pollen allergen ole e 6coord: 34..75
IPR015333Pollen allergen ole e 6PFAMPF09253Ole_e_6coord: 40..76
e-value: 2.5E-12
score: 46.5
IPR015333Pollen allergen ole e 6PANTHERPTHR35632MAJOR POLLEN ALLERGEN OLE E 6-LIKEcoord: 1..79
NoneNo IPR availablePANTHERPTHR35632:SF5SUBFAMILY NOT NAMEDcoord: 1..79

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0013882.1Tan0013882.1mRNA