Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACTATTCATCGAATGAGGTACCTCCTAACTCTGATGAAGAGAGAGACTTAGAGAGAGACTTTGTTTCATCTGAGGTTCATGTTGAGTTAGTTGTCGATGATGAAGAAACTGAGATCCATGGAGATTGGGGTGAGAAACCTACTCAATCTTCTAAATGTCGTTCAGTTGGCTCATCATTGGATAGTTGTGCTCATAAGACTGCACGAACTGCTCGACAAGTCATTTTGATGATGCTTTAAAAGTATGGACTAAGTCAATGACTGAGGTCTTTTCGAAAATGTGAATTAGAAGCCACCGTATCTAATGCTGAAAAGTATAGCATTGAGGAGTGTATGACCAAGTTAGGCTCTATTTTCGTACTTCCTAACACTGCTTATGTGAAAATATGTGAAAAGTTTGTTTTATATGAGTGGAGAGCAATGTTCATGATCATGTCAGAGGTAAATATTCGAACAATGTTAGGTGTAGACTTCTCTTCTTAA
mRNA sequence
ATGCACTATTCATCGAATGAGGTACCTCCTAACTCTGATGAAGAGAGAGACTTAGAGAGAGACTTTGTTTCATCTGAGGTTCATGTTGAGTTAGTTGTCGATGATGAAGAAACTGAGATCCATGGAGATTGGGGTGAGAAACCTACTCAATCTTCTAAATGTCGTTCAGTTGGCTCATCATTGGATAGTTGTGCTCATAAGACTGCACGAACTGCTCGACAATATAGCATTGAGGAGTGTATGACCAAGTTAGGCTCTATTTTCGTACTTCCTAACACTGCTTATGTGAAAATATGTGAAAAGTTTGTTTTATATGAGTGGAGAGCAATGTTCATGATCATGTCAGAGGTAAATATTCGAACAATGTTAGGTGTAGACTTCTCTTCTTAA
Coding sequence (CDS)
ATGCACTATTCATCGAATGAGGTACCTCCTAACTCTGATGAAGAGAGAGACTTAGAGAGAGACTTTGTTTCATCTGAGGTTCATGTTGAGTTAGTTGTCGATGATGAAGAAACTGAGATCCATGGAGATTGGGGTGAGAAACCTACTCAATCTTCTAAATGTCGTTCAGTTGGCTCATCATTGGATAGTTGTGCTCATAAGACTGCACGAACTGCTCGACAATATAGCATTGAGGAGTGTATGACCAAGTTAGGCTCTATTTTCGTACTTCCTAACACTGCTTATGTGAAAATATGTGAAAAGTTTGTTTTATATGAGTGGAGAGCAATGTTCATGATCATGTCAGAGGTAAATATTCGAACAATGTTAGGTGTAGACTTCTCTTCTTAA
Protein sequence
MHYSSNEVPPNSDEERDLERDFVSSEVHVELVVDDEETEIHGDWGEKPTQSSKCRSVGSSLDSCAHKTARTARQYSIEECMTKLGSIFVLPNTAYVKICEKFVLYEWRAMFMIMSEVNIRTMLGVDFSS
Homology
BLAST of Tan0013783 vs. NCBI nr
Match:
XP_016651533.1 (PREDICTED: L10-interacting MYB domain-containing protein-like [Prunus mume])
HSP 1 Score: 73.6 bits (179), Expect = 1.4e-09
Identity = 45/149 (30.20%), Postives = 78/149 (52.35%), Query Frame = 0
Query: 1 MHYSSNEVPPNSDEERDLERDFVSSEVHVELVVDDEETEIHGDWGE----------KPTQ 60
+ Y+SN++PPNSDEER+LE +F+++ VH+++ +DD + + D G+ +
Sbjct: 247 LRYASNQLPPNSDEERELENNFLNTGVHIDVDLDDNDVNLETDHGKGKRKSVTATPPERR 306
Query: 61 SSKCRSVGSSLDSCA----------------HKTARTARQYSIEECMTKLGSIFVLPNTA 120
S K + S L+ C+ ++ + YSIEEC+ + + + N
Sbjct: 307 SKKWDKMESYLEVCSEVMSQRLQTIQKEKSVEASSTSKEMYSIEECIGIVEEMGDIDNDT 366
Query: 121 YVKICEKFVLYEWRAMFMIMSEVNIRTML 124
+ K+ EK VL EWR +F+ MS+ R+ L
Sbjct: 367 FNKMLEKIVLIEWRKIFVTMSDARRRSWL 395
BLAST of Tan0013783 vs. NCBI nr
Match:
XP_008246059.1 (PREDICTED: L10-interacting MYB domain-containing protein-like [Prunus mume])
HSP 1 Score: 72.0 bits (175), Expect = 4.2e-09
Identity = 45/149 (30.20%), Postives = 78/149 (52.35%), Query Frame = 0
Query: 1 MHYSSNEVPPNSDEERDLERDFVSSEVHVELVVDDEETEIHGDWGE----------KPTQ 60
+ Y+SN++PPNSDEER+LE +F+++ VH+++ +DD+ + D G+ +
Sbjct: 141 LRYASNQLPPNSDEERELENNFLNTGVHIDVDLDDDGFNLETDHGKGKRKSVTATPPERR 200
Query: 61 SSKCRSVGSSLDSCA----------------HKTARTARQYSIEECMTKLGSIFVLPNTA 120
S K + S L+ C+ ++ + YSIEEC+ + + + N
Sbjct: 201 SKKWDKMESYLEVCSEVMSQRLQTIQKEKSVEASSTSKEMYSIEECIGIVEEMGDIDNDT 260
Query: 121 YVKICEKFVLYEWRAMFMIMSEVNIRTML 124
+ K+ EK VL EWR +F+ MS+ R+ L
Sbjct: 261 FNKMLEKIVLIEWRKIFVTMSDARRRSWL 289
BLAST of Tan0013783 vs. NCBI nr
Match:
XP_021827451.1 (L10-interacting MYB domain-containing protein-like [Prunus avium])
HSP 1 Score: 70.9 bits (172), Expect = 9.3e-09
Identity = 44/149 (29.53%), Postives = 76/149 (51.01%), Query Frame = 0
Query: 1 MHYSSNEVPPNSDEERDLERDFVSSEVHVELVVDDEETEIHGDWGE----------KPTQ 60
+ Y+SN++PPNSDEER+LE +F+++ VH+++ +DD+ + D G+ +
Sbjct: 141 LRYASNQLPPNSDEERELENNFLNTSVHIDVDLDDDGVNLEIDHGKGKRKCVTATPPERR 200
Query: 61 SSKCRSVGSSLDSCA----------------HKTARTARQYSIEECMTKLGSIFVLPNTA 120
K + S L+ C+ ++ + YSIEEC+ + + + N
Sbjct: 201 PKKWDKMESYLEVCSEVMSQRLQSLQKEKSVEASSTSKEMYSIEECIGLVEEMGDIENDT 260
Query: 121 YVKICEKFVLYEWRAMFMIMSEVNIRTML 124
+ K+ EK VL EWR +F+ MS+ R L
Sbjct: 261 FNKMLEKIVLVEWRKIFITMSDARRRAWL 289
BLAST of Tan0013783 vs. NCBI nr
Match:
XP_008222570.1 (PREDICTED: L10-interacting MYB domain-containing protein-like [Prunus mume])
HSP 1 Score: 70.9 bits (172), Expect = 9.3e-09
Identity = 42/123 (34.15%), Postives = 73/123 (59.35%), Query Frame = 0
Query: 1 MHYSSNEVPPNSDEERDLERDFVSSEVHVELVVDDEETEIHGDWGEKPTQSSKCRSVGSS 60
+HY+S+++PPNSD++R+LE +F+++ VH+++ +DD+ G+KP Q K +S+ +S
Sbjct: 141 LHYASSQLPPNSDDKRELENNFLNTGVHIDVDLDDD--------GDKP-QLEKEKSLEAS 200
Query: 61 LDSCAHKTARTARQYSIEECMTKLGSIFVLPNTAYVKICEKFVLYEWRAMFMIMSEVNIR 120
+ + YSIEEC+ ++ + N + K+ EK VL EWR +F+ M R
Sbjct: 201 --------STSKEMYSIEECIEIFETMGDIDNDTFNKMLEKIVLIEWRKIFVTMPAARKR 246
Query: 121 TML 124
L
Sbjct: 261 AWL 246
BLAST of Tan0013783 vs. NCBI nr
Match:
CAB4313924.1 (unnamed protein product [Prunus armeniaca])
HSP 1 Score: 70.5 bits (171), Expect = 1.2e-08
Identity = 48/150 (32.00%), Postives = 80/150 (53.33%), Query Frame = 0
Query: 1 MHYSSNEVPPNSDEERDLERDFVSSEVHVELVVDD----EETEIHGDWGEKPT------- 60
+ Y+SN++PPNSDEER+LE +F+++ VH+++ +DD +ET+ HG K
Sbjct: 184 LRYASNQLPPNSDEERELENNFLNTGVHIDVDLDDDGFNQETD-HGKGKRKSVTATPPER 243
Query: 61 QSSKCRSVGSSLDSCA----------------HKTARTARQYSIEECMTKLGSIFVLPNT 120
+S K + S L+ C+ ++ + YSIEEC+ + + + N
Sbjct: 244 RSKKWDKMESYLEVCSEVMSQRLQTIQKEKSVEASSTSKEMYSIEECIGIVEEMGDIDND 303
Query: 121 AYVKICEKFVLYEWRAMFMIMSEVNIRTML 124
+ K+ EK VL EWR +F+ MS+ R+ L
Sbjct: 304 TFNKMLEKIVLIEWRKIFVTMSDARRRSWL 332
BLAST of Tan0013783 vs. ExPASy TrEMBL
Match:
A0A6P5TKC6 (L10-interacting MYB domain-containing protein-like OS=Prunus avium OX=42229 GN=LOC110768071 PE=4 SV=1)
HSP 1 Score: 70.9 bits (172), Expect = 4.5e-09
Identity = 44/149 (29.53%), Postives = 76/149 (51.01%), Query Frame = 0
Query: 1 MHYSSNEVPPNSDEERDLERDFVSSEVHVELVVDDEETEIHGDWGE----------KPTQ 60
+ Y+SN++PPNSDEER+LE +F+++ VH+++ +DD+ + D G+ +
Sbjct: 141 LRYASNQLPPNSDEERELENNFLNTSVHIDVDLDDDGVNLEIDHGKGKRKCVTATPPERR 200
Query: 61 SSKCRSVGSSLDSCA----------------HKTARTARQYSIEECMTKLGSIFVLPNTA 120
K + S L+ C+ ++ + YSIEEC+ + + + N
Sbjct: 201 PKKWDKMESYLEVCSEVMSQRLQSLQKEKSVEASSTSKEMYSIEECIGLVEEMGDIENDT 260
Query: 121 YVKICEKFVLYEWRAMFMIMSEVNIRTML 124
+ K+ EK VL EWR +F+ MS+ R L
Sbjct: 261 FNKMLEKIVLVEWRKIFITMSDARRRAWL 289
BLAST of Tan0013783 vs. ExPASy TrEMBL
Match:
A0A6J5XSA5 (Myb_DNA-bind_3 domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS37637 PE=4 SV=1)
HSP 1 Score: 70.5 bits (171), Expect = 5.9e-09
Identity = 48/150 (32.00%), Postives = 80/150 (53.33%), Query Frame = 0
Query: 1 MHYSSNEVPPNSDEERDLERDFVSSEVHVELVVDD----EETEIHGDWGEKPT------- 60
+ Y+SN++PPNSDEER+LE +F+++ VH+++ +DD +ET+ HG K
Sbjct: 184 LRYASNQLPPNSDEERELENNFLNTGVHIDVDLDDDGFNQETD-HGKGKRKSVTATPPER 243
Query: 61 QSSKCRSVGSSLDSCA----------------HKTARTARQYSIEECMTKLGSIFVLPNT 120
+S K + S L+ C+ ++ + YSIEEC+ + + + N
Sbjct: 244 RSKKWDKMESYLEVCSEVMSQRLQTIQKEKSVEASSTSKEMYSIEECIGIVEEMGDIDND 303
Query: 121 AYVKICEKFVLYEWRAMFMIMSEVNIRTML 124
+ K+ EK VL EWR +F+ MS+ R+ L
Sbjct: 304 TFNKMLEKIVLIEWRKIFVTMSDARRRSWL 332
BLAST of Tan0013783 vs. ExPASy TrEMBL
Match:
A0A6P5U4S0 (L10-interacting MYB domain-containing protein-like OS=Prunus avium OX=42229 GN=LOC110773872 PE=4 SV=1)
HSP 1 Score: 68.6 bits (166), Expect = 2.2e-08
Identity = 45/148 (30.41%), Postives = 81/148 (54.73%), Query Frame = 0
Query: 1 MHYSSNEVPPNSDEERDLERDFVSSEVHVELVVDD--EETEIHGDWGEKPTQS---SKCR 60
+HY+S+++PPNSD+ER+LE +F+++ VH+++ +DD + ++ G++ + +CR
Sbjct: 120 LHYASSQLPPNSDDERELENNFLNTGVHIDVDLDDDGDNPQLLSGKGKRKCATIAPPECR 179
Query: 61 S-----VGSSLDSCA---------------HKTARTARQYSIEECMTKLGSIFVLPNTAY 120
S + S LD C+ ++ + YSIEEC+ + ++ + N +
Sbjct: 180 SKKWDKMESYLDVCSEVMSQKLQREKEKSLEASSTSKEMYSIEECIGIVETMGDVDNNTF 239
Query: 121 VKICEKFVLYEWRAMFMIMSEVNIRTML 124
K+ EK VL EWR +F+IM R L
Sbjct: 240 NKMLEKIVLVEWRKIFVIMPATRRRAWL 267
BLAST of Tan0013783 vs. ExPASy TrEMBL
Match:
M5X9B7 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa017630mg PE=4 SV=1)
HSP 1 Score: 68.2 bits (165), Expect = 2.9e-08
Identity = 39/119 (32.77%), Postives = 64/119 (53.78%), Query Frame = 0
Query: 1 MHYSSNEVPPNSDEERDLERDFVSSEVHVELVVDDEETEI---HGDWGEKPTQSSKCRSV 60
+ Y+SN++P NSDEER LE +F++ VH+++ DD+ + HG K ++
Sbjct: 50 LRYASNQLPLNSDEERKLENNFLNIGVHIDVDSDDDGINLKIDHGKGKRKCVTATPSERH 109
Query: 61 GSSLDSCAHKTARTARQYSIEECMTKLGSIFVLPNTAYVKICEKFVLYEWRAMFMIMSE 117
D + + YSIEEC+ + + + N + K+ EK VL EWR +F+ MS+
Sbjct: 110 PKKWDKILEAFSTSKEMYSIEECIRLVEEMVDIDNDTFNKMLEKIVLIEWRKIFVTMSD 168
BLAST of Tan0013783 vs. ExPASy TrEMBL
Match:
A0A6J5W1Z4 (Myb_DNA-bind_3 domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS3642 PE=4 SV=1)
HSP 1 Score: 67.0 bits (162), Expect = 6.5e-08
Identity = 47/161 (29.19%), Postives = 79/161 (49.07%), Query Frame = 0
Query: 1 MHYSSNEVPPNSDEERDLERDFVSSEVHVELVVDDEETEIHGDWGEKPTQSS-----KCR 60
+HY S+++PPNSD++R++E +F+++EVH+++ +DD+ G+KP S KC
Sbjct: 123 LHYVSSQLPPNSDDKREVENNFLNTEVHIDVDLDDD--------GDKPQLVSSKGKRKCA 182
Query: 61 SVG-------------SSLDSCAHKTAR---------------TARQYSIEECMTKLGSI 120
+V S LD C+ ++ + YSIEEC+ + +
Sbjct: 183 TVAALERRPKKWDKMESYLDVCSEVMSQKLQRKKEKSLEAFSTSKEMYSIEECIEIVETT 242
Query: 121 FVLPNTAYVKICEKFVLYEWRAMFMIMSEVNIRTMLGVDFS 129
+ N + K+ EK VL EWR +F+ M R L + S
Sbjct: 243 GDIDNDTFNKMLEKIVLIEWRKIFVTMLAARKRAWLAMSHS 275
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_016651533.1 | 1.4e-09 | 30.20 | PREDICTED: L10-interacting MYB domain-containing protein-like [Prunus mume] | [more] |
XP_008246059.1 | 4.2e-09 | 30.20 | PREDICTED: L10-interacting MYB domain-containing protein-like [Prunus mume] | [more] |
XP_021827451.1 | 9.3e-09 | 29.53 | L10-interacting MYB domain-containing protein-like [Prunus avium] | [more] |
XP_008222570.1 | 9.3e-09 | 34.15 | PREDICTED: L10-interacting MYB domain-containing protein-like [Prunus mume] | [more] |
CAB4313924.1 | 1.2e-08 | 32.00 | unnamed protein product [Prunus armeniaca] | [more] |
Match Name | E-value | Identity | Description | |
A0A6P5TKC6 | 4.5e-09 | 29.53 | L10-interacting MYB domain-containing protein-like OS=Prunus avium OX=42229 GN=L... | [more] |
A0A6J5XSA5 | 5.9e-09 | 32.00 | Myb_DNA-bind_3 domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDH... | [more] |
A0A6P5U4S0 | 2.2e-08 | 30.41 | L10-interacting MYB domain-containing protein-like OS=Prunus avium OX=42229 GN=L... | [more] |
M5X9B7 | 2.9e-08 | 32.77 | Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa017630mg PE=4 SV=1 | [more] |
A0A6J5W1Z4 | 6.5e-08 | 29.19 | Myb_DNA-bind_3 domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDH... | [more] |
Match Name | E-value | Identity | Description | |