Tan0013772 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACGCCTCTCCTTGCTCTTCTTCTACCAAAACCAGAATTCTCTCTCTGTTTCTCTCCGAGTCTGACCCATGGGGAATTACATTTCTTGCGCCTTGGCGACGCCGTTGATCAAGAATTCCAAGGCGGTCAGAGTCGTGCTTCCAGGCGGCGAGGTCCGTCAGTTCCGGGAACCGGTGAAGGCGGCGGAGCTCATGCTCGAATGTCCCAGTTACTTTCTCTCCAACGCCCAGTCTCTCCACATCGGCCGCAGATTCTCCGCCCTCGGCGCCGACGAGGAGTTGGAATTCGGAAACGTCTACCTGATGTTTCCGATGAAGAGAGTTAACTCCGTCGTCACGGCGGCAGATTTAGCCACGTTCTTCATGGCGGCCAACTCCGCGGCCAGGCGGATTTCGGTCGATAAGGTTAGGGTTTCGGCAGAGCATCGGAATCAAGAATCGGTTCAATCGGAAGCGGAATCGAGGGCGAGAATCATCGATGGAAATGATGGTCCGAGATTGAGTTTGGAAGGAATCGAGGGATTTCCGATGCATCGATTGTCGGTTTGCCGATCGAGGAAGCCATTGTTGGAGACCATTAAAGAAGAGCATATTAGGTCAAGATAAGAAGATCTCTGTGTATTAAAATGAAATTCAATTCACAATTGAACTTCAATTTTGTGATTCTGATCTCGAATTTTGAAGAAGATGGTTGAAGATTTTGGCGGGGGGATTGAGAAAGTCCGTTCATGTCAATTTTCATTGTTTGTGAAATTTGTGCGCCTGGTTTTGGAGGAGACCAAGCGACGTCGTATTTCTGCTGCCCCTTCCATTTTTCCCAAGTCTATTGCCAATTCTTATTTATTTTTTTTACCCTACGATTGAGATAAGCTTTTGAAAGTAAATTTGATTGTAAAAAAATAATGGTAGGGATTTTTTTTTTTGATATTTTATCTTGCTGTGACAACCTTTTTAGGCTTTTACTAGACAGATTAATAATTATTATAAGAAGTTTTAAAAAAATAAACTAGTTACATTGTAATAAAAACTATCAAGTCGATATAATTCATTTGAGTAAAAATGTAACTAATGAAAATTAATGCCGAGTAATTGATAAGTAA AAACGCCTCTCCTTGCTCTTCTTCTACCAAAACCAGAATTCTCTCTCTGTTTCTCTCCGAGTCTGACCCATGGGGAATTACATTTCTTGCGCCTTGGCGACGCCGTTGATCAAGAATTCCAAGGCGGTCAGAGTCGTGCTTCCAGGCGGCGAGGTCCGTCAGTTCCGGGAACCGGTGAAGGCGGCGGAGCTCATGCTCGAATGTCCCAGTTACTTTCTCTCCAACGCCCAGTCTCTCCACATCGGCCGCAGATTCTCCGCCCTCGGCGCCGACGAGGAGTTGGAATTCGGAAACGTCTACCTGATGTTTCCGATGAAGAGAGTTAACTCCGTCGTCACGGCGGCAGATTTAGCCACGTTCTTCATGGCGGCCAACTCCGCGGCCAGGCGGATTTCGGTCGATAAGGTTAGGGTTTCGGCAGAGCATCGGAATCAAGAATCGGTTCAATCGGAAGCGGAATCGAGGGCGAGAATCATCGATGGAAATGATGGTCCGAGATTGAGTTTGGAAGGAATCGAGGGATTTCCGATGCATCGATTGTCGGTTTGCCGATCGAGGAAGCCATTGTTGGAGACCATTAAAGAAGAGCATATTAGGTCAAGATAAGAAGATCTCTGTGTATTAAAATGAAATTCAATTCACAATTGAACTTCAATTTTGTGATTCTGATCTCGAATTTTGAAGAAGATGGTTGAAGATTTTGGCGGGGGGATTGAGAAAGTCCGTTCATGTCAATTTTCATTGTTTGTGAAATTTGTGCGCCTGGTTTTGGAGGAGACCAAGCGACGTCGTATTTCTGCTGCCCCTTCCATTTTTCCCAAGTCTATTGCCAATTCTTATTTATTTTTTTTACCCTACGATTGAGATAAGCTTTTGAAAGTAAATTTGATTGTAAAAAAATAATGGTAGGGATTTTTTTTTTTGATATTTTATCTTGCTGTGACAACCTTTTTAGGCTTTTACTAGACAGATTAATAATTATTATAAGAAGTTTTAAAAAAATAAACTAGTTACATTGTAATAAAAACTATCAAGTCGATATAATTCATTTGAGTAAAAATGTAACTAATGAAAATTAATGCCGAGTAATTGATAAGTAA ATGGGGAATTACATTTCTTGCGCCTTGGCGACGCCGTTGATCAAGAATTCCAAGGCGGTCAGAGTCGTGCTTCCAGGCGGCGAGGTCCGTCAGTTCCGGGAACCGGTGAAGGCGGCGGAGCTCATGCTCGAATGTCCCAGTTACTTTCTCTCCAACGCCCAGTCTCTCCACATCGGCCGCAGATTCTCCGCCCTCGGCGCCGACGAGGAGTTGGAATTCGGAAACGTCTACCTGATGTTTCCGATGAAGAGAGTTAACTCCGTCGTCACGGCGGCAGATTTAGCCACGTTCTTCATGGCGGCCAACTCCGCGGCCAGGCGGATTTCGGTCGATAAGGTTAGGGTTTCGGCAGAGCATCGGAATCAAGAATCGGTTCAATCGGAAGCGGAATCGAGGGCGAGAATCATCGATGGAAATGATGGTCCGAGATTGAGTTTGGAAGGAATCGAGGGATTTCCGATGCATCGATTGTCGGTTTGCCGATCGAGGAAGCCATTGTTGGAGACCATTAAAGAAGAGCATATTAGGTCAAGATAA MGNYISCALATPLIKNSKAVRVVLPGGEVRQFREPVKAAELMLECPSYFLSNAQSLHIGRRFSALGADEELEFGNVYLMFPMKRVNSVVTAADLATFFMAANSAARRISVDKVRVSAEHRNQESVQSEAESRARIIDGNDGPRLSLEGIEGFPMHRLSVCRSRKPLLETIKEEHIRSR Homology
BLAST of Tan0013772 vs. NCBI nr
Match: XP_022990517.1 (uncharacterized protein LOC111487371 [Cucurbita maxima]) HSP 1 Score: 308.1 bits (788), Expect = 4.8e-80 Identity = 158/177 (89.27%), Postives = 164/177 (92.66%), Query Frame = 0
BLAST of Tan0013772 vs. NCBI nr
Match: XP_038875190.1 (uncharacterized protein LOC120067712 [Benincasa hispida]) HSP 1 Score: 308.1 bits (788), Expect = 4.8e-80 Identity = 158/178 (88.76%), Postives = 166/178 (93.26%), Query Frame = 0
BLAST of Tan0013772 vs. NCBI nr
Match: KAG7032555.1 (hypothetical protein SDJN02_06604, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 306.6 bits (784), Expect = 1.4e-79 Identity = 156/177 (88.14%), Postives = 164/177 (92.66%), Query Frame = 0
BLAST of Tan0013772 vs. NCBI nr
Match: KAG6601856.1 (hypothetical protein SDJN03_07089, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 306.2 bits (783), Expect = 1.8e-79 Identity = 155/177 (87.57%), Postives = 164/177 (92.66%), Query Frame = 0
BLAST of Tan0013772 vs. NCBI nr
Match: XP_022939302.1 (uncharacterized protein LOC111445259 [Cucurbita moschata] >KAG6579247.1 hypothetical protein SDJN03_23695, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016762.1 hypothetical protein SDJN02_21872, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 304.7 bits (779), Expect = 5.3e-79 Identity = 157/178 (88.20%), Postives = 165/178 (92.70%), Query Frame = 0
BLAST of Tan0013772 vs. ExPASy TrEMBL
Match: A0A6J1JIZ2 (uncharacterized protein LOC111487371 OS=Cucurbita maxima OX=3661 GN=LOC111487371 PE=4 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 2.3e-80 Identity = 158/177 (89.27%), Postives = 164/177 (92.66%), Query Frame = 0
BLAST of Tan0013772 vs. ExPASy TrEMBL
Match: A0A6J1FGE8 (uncharacterized protein LOC111445259 OS=Cucurbita moschata OX=3662 GN=LOC111445259 PE=4 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 2.6e-79 Identity = 157/178 (88.20%), Postives = 165/178 (92.70%), Query Frame = 0
BLAST of Tan0013772 vs. ExPASy TrEMBL
Match: A0A6J1JZA3 (uncharacterized protein LOC111489224 OS=Cucurbita maxima OX=3661 GN=LOC111489224 PE=4 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 1.2e-76 Identity = 155/176 (88.07%), Postives = 161/176 (91.48%), Query Frame = 0
BLAST of Tan0013772 vs. ExPASy TrEMBL
Match: A0A1S3CT06 (uncharacterized protein LOC103504565 OS=Cucumis melo OX=3656 GN=LOC103504565 PE=4 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 3.8e-75 Identity = 152/178 (85.39%), Postives = 162/178 (91.01%), Query Frame = 0
BLAST of Tan0013772 vs. ExPASy TrEMBL
Match: A0A0A0KUY1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571440 PE=4 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 1.1e-74 Identity = 151/178 (84.83%), Postives = 162/178 (91.01%), Query Frame = 0
BLAST of Tan0013772 vs. TAIR 10
Match: AT5G17350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 131.3 bits (329), Expect = 7.5e-31 Identity = 81/184 (44.02%), Postives = 111/184 (60.33%), Query Frame = 0
BLAST of Tan0013772 vs. TAIR 10
Match: AT3G03280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17350.1); Has 137 Blast hits to 137 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 137; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 127.1 bits (318), Expect = 1.4e-29 Identity = 76/181 (41.99%), Postives = 108/181 (59.67%), Query Frame = 0
BLAST of Tan0013772 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 54.7 bits (130), Expect = 8.9e-08 Identity = 25/87 (28.74%), Postives = 47/87 (54.02%), Query Frame = 0
BLAST of Tan0013772 vs. TAIR 10
Match: AT2G23690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 52.4 bits (124), Expect = 4.4e-07 Identity = 24/87 (27.59%), Postives = 46/87 (52.87%), Query Frame = 0
BLAST of Tan0013772 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 51.6 bits (122), Expect = 7.5e-07 Identity = 24/88 (27.27%), Postives = 50/88 (56.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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