Tan0013721 (gene) Snake gourd v1

Overview
NameTan0013721
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
LocationLG06: 68211165 .. 68213092 (+)
RNA-Seq ExpressionTan0013721
SyntenyTan0013721
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCTCCTTCAGTCTCTCCCACCATGTTTACGCTCCAGATTCTTCGATTGAGCGAACTGAGGAGCTCCATTTTCTCACTCCTTCCTGTTTCCAACATTGTCAATCTCAAATGCTCTCGATCATCGGTCTCGCTCATAGTCTCATACGCGGATGAATCCCATTCCTTGGTTGCATCGTTCCAAATGTTCGATCGATTCTTCACCACCTTCTCCGCTCCCGATGGCATTTACAATTTCGACATCGACCTTCAAGAACTCTCTCATCTTATCTTGAGCGACGATCTTCTTTTGACCATTCTTGTTCCGACTGTCGTCTCATCCCCCACCCTTATATCTTCAACTAGTACGTTATGTTTCCCTTTTACATTTAATTTCCATTTCCGAATAACAATAATCTTGATTCTGATTGTATCGTCTTGTGCTTTCTTGATTCAATTGATCTTTCCGAATAACAATAATCTTGATTCTGATTGCATCGTCTTGTGGTTTCTTAATTCGATTTATCTTGATTTTGGCGAATTTTTTACAATCCAAGAGGAATTCGGCGCCTCTCTGCATTTTAGGGCTTTTTATGATCGATAATCGGTTTGGTTTAGTTTGGTTTCAAGAACGCAATTGACTTGATTTCTTCGAACGAAAACGAATCTGAATGAGAACAAAGCCCTAAATTAGCATTATCAATTCGAGATTGTTTTACCTGATTCCAGTTCTTAATTGTAAAATTTTGATTGCAGGGGATGGAGATTTTCGTTCGCTCGCTCTATTGTCGGCGATGCTTCCCCAAAATAGGAAAGTGAGCACATTTGACCTGACGTTGTTTGTGGCAGTTGATGCAGCAAAGCTCAGAGAGATAGCAACACGATTATCTGACGAAAATGGACCAAGTAACTCAACTTCTCTTCCCCATTTGTGCATTTTACATATGCTTCCTTTAAGTTTATGAAACTTTTCCTCTGCAACAGTTTTTGCTACTGCATCGACTTCACAAGTCAAGTTTTATGAAAAATCACCTACTGGGGAGACTATTGGGGTGACTGTTCTTACGGCACAGGTAATATAATATAAGATAAATTACAAGTTAACCTTAAGAGGATTGAGTTTCTAAGCCTATTAACTGAGTGTTAATTACGTTCAGAAACAGAACTTTTAATGTTGTAAAAAAAAATGGGCTATAAGCCCTGCACTTTAGTGTCTAATAAGGGGTTGTGTATGATAAGTTCTGAAATTTTCAATATTAGATTCAATATGTATCTATAGTGAGAATAGTGTTTAATAAATTCTTAAACATTTAACTTTGTGTCAAATATGTTCATAAATTTTTAATAAAGTATCTAATAGATCACTAATCCTTAAAATGTGTCTCGTAAGTTAAAGATATGATAGATAGAAAATTCAAATTAAAGTTGAAGAATAAGATACAAAAATAGAAAGCTAGACACCTTAGTTGACACTTTCTAAGATTTAGTGACCCATGTTAGACACAATATTGAATACTTAAAAGGACTTATTAATTAGACAATTTTTTTAAGTTTAGGAATCAAACTTATAATTTAACGTCGGATATTATCAGTTGAGGAAGGGTTTTAAAGTGTTGGTAATGAAAAATGAAAGCCTAGCTTCTGATTGATACTAAAGGAATTGTTTTGGTAAAATCTGTGCAGAAATGCGAGTGCTGGGCGGGAGGTTTTGATGACAGATTTAATGAAATAAACTTTTCATTCGCTGTGAAACCCAAGGATTTTTTCCATCGTGCATTGGATTTGACCAACTTGGTTTGGTTCTTTAAGTCAACACGTTGGAACACAACAGCGGTTTGCTTTACCAGAGAATGGACCAACATTATGGCCTGTTATCCTAGAGACAAATACATAAGTTCTCTGTTAAATTCTTTTACTCTCGATAGAATTAAGAGAAGGACACCGAAATTTA

mRNA sequence

TTTCTCCTTCAGTCTCTCCCACCATGTTTACGCTCCAGATTCTTCGATTGAGCGAACTGAGGAGCTCCATTTTCTCACTCCTTCCTGTTTCCAACATTGTCAATCTCAAATGCTCTCGATCATCGGTCTCGCTCATAGTCTCATACGCGGATGAATCCCATTCCTTGGTTGCATCGTTCCAAATGTTCGATCGATTCTTCACCACCTTCTCCGCTCCCGATGGCATTTACAATTTCGACATCGACCTTCAAGAACTCTCTCATCTTATCTTGAGCGACGATCTTCTTTTGACCATTCTTGTTCCGACTGTCGTCTCATCCCCCACCCTTATATCTTCAACTAGGGATGGAGATTTTCGTTCGCTCGCTCTATTGTCGGCGATGCTTCCCCAAAATAGGAAAGTGAGCACATTTGACCTGACGTTGTTTGTGGCAGTTGATGCAGCAAAGCTCAGAGAGATAGCAACACGATTATCTGACGAAAATGGACCAATTTATGAAACTTTTCCTCTGCAACAGTTTTTGCTACTGCATCGACTTCACAAGTCAAGTTTTATGAAAAATCACCTACTGGGGAGACTATTGGGGTGACTGTTCTTACGGCACAGAAATGCGAGTGCTGGGCGGGAGGTTTTGATGACAGATTTAATGAAATAAACTTTTCATTCGCTGTGAAACCCAAGGATTTTTTCCATCGTGCATTGGATTTGACCAACTTGGTTTGGTTCTTTAAGTCAACACGTTGGAACACAACAGCGGTTTGCTTTACCAGAGAATGGACCAACATTATGGCCTGTTATCCTAGAGACAAATACATAAGTTCTCTGTTAAATTCTTTTACTCTCGATAGAATTAAGAGAAGGACACCGAAATTTA

Coding sequence (CDS)

ATGTTTACGCTCCAGATTCTTCGATTGAGCGAACTGAGGAGCTCCATTTTCTCACTCCTTCCTGTTTCCAACATTGTCAATCTCAAATGCTCTCGATCATCGGTCTCGCTCATAGTCTCATACGCGGATGAATCCCATTCCTTGGTTGCATCGTTCCAAATGTTCGATCGATTCTTCACCACCTTCTCCGCTCCCGATGGCATTTACAATTTCGACATCGACCTTCAAGAACTCTCTCATCTTATCTTGAGCGACGATCTTCTTTTGACCATTCTTGTTCCGACTGTCGTCTCATCCCCCACCCTTATATCTTCAACTAGGGATGGAGATTTTCGTTCGCTCGCTCTATTGTCGGCGATGCTTCCCCAAAATAGGAAAGTGAGCACATTTGACCTGACGTTGTTTGTGGCAGTTGATGCAGCAAAGCTCAGAGAGATAGCAACACGATTATCTGACGAAAATGGACCAATTTATGAAACTTTTCCTCTGCAACAGTTTTTGCTACTGCATCGACTTCACAAGTCAAGTTTTATGAAAAATCACCTACTGGGGAGACTATTGGGGTGA

Protein sequence

MFTLQILRLSELRSSIFSLLPVSNIVNLKCSRSSVSLIVSYADESHSLVASFQMFDRFFTTFSAPDGIYNFDIDLQELSHLILSDDLLLTILVPTVVSSPTLISSTRDGDFRSLALLSAMLPQNRKVSTFDLTLFVAVDAAKLREIATRLSDENGPIYETFPLQQFLLLHRLHKSSFMKNHLLGRLLG
Homology
BLAST of Tan0013721 vs. NCBI nr
Match: XP_022964051.1 (uncharacterized protein LOC111464195 [Cucurbita moschata])

HSP 1 Score: 222.2 bits (565), Expect = 3.7e-54
Identity = 123/171 (71.93%), Postives = 138/171 (80.70%), Query Frame = 0

Query: 1   MFTLQILRLSELRSSIFSLLPVSNIVNLKCSRSSVSLIVSYADESHSLVASFQMFDRFFT 60
           MFTLQIL L ELRSSI  LLP+SNI NL+CS+ SVSL VSY+DESH LVA+FQMFD FFT
Sbjct: 1   MFTLQILGLGELRSSIVQLLPLSNIANLRCSKFSVSLTVSYSDESHFLVAAFQMFDPFFT 60

Query: 61  TFSAPDGIYNFDIDLQELSHLILSDDLLLTILVPTVVSSPTLISSTRDGDFRSLALLSAM 120
            FSA DG YN DIDLQELS +IL DDL LTILVP+VVSS +LIS TRDG+FRSLALL A+
Sbjct: 61  IFSARDGNYNLDIDLQELSQIILEDDLFLTILVPSVVSSASLISLTRDGEFRSLALLGAV 120

Query: 121 LPQNRKVSTFDLTLFVAVDAAKLREIATRLSDENGPIYETFPLQQFLLLHR 172
            PQ+  VS FDL LFVAVDAAKLREIATRLSD+NGPI+ T    Q +   +
Sbjct: 121 PPQDMTVSKFDLNLFVAVDAAKLREIATRLSDQNGPIFATASTSQVIFYEK 171

BLAST of Tan0013721 vs. NCBI nr
Match: KAG7026010.1 (hypothetical protein SDJN02_12508, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 221.9 bits (564), Expect = 4.8e-54
Identity = 123/171 (71.93%), Postives = 138/171 (80.70%), Query Frame = 0

Query: 1   MFTLQILRLSELRSSIFSLLPVSNIVNLKCSRSSVSLIVSYADESHSLVASFQMFDRFFT 60
           MFTLQIL L ELRSSI  LLP+SNI +L+CS+ SVSL VSY+DESH LVA+FQMFD FFT
Sbjct: 1   MFTLQILGLGELRSSIVQLLPLSNIAHLRCSKFSVSLTVSYSDESHFLVAAFQMFDPFFT 60

Query: 61  TFSAPDGIYNFDIDLQELSHLILSDDLLLTILVPTVVSSPTLISSTRDGDFRSLALLSAM 120
            FSA DG YN DIDLQELS +IL DDL LTILVP+VVSS +LIS TRDG+FRSLALL AM
Sbjct: 61  IFSARDGNYNLDIDLQELSQIILEDDLFLTILVPSVVSSASLISLTRDGEFRSLALLGAM 120

Query: 121 LPQNRKVSTFDLTLFVAVDAAKLREIATRLSDENGPIYETFPLQQFLLLHR 172
            PQ+  VS FDL LFVAVDAAKLREIATRLSD+NGPI+ T    Q +   +
Sbjct: 121 PPQDMTVSKFDLNLFVAVDAAKLREIATRLSDQNGPIFATASTSQVIFYEK 171

BLAST of Tan0013721 vs. NCBI nr
Match: XP_023515127.1 (uncharacterized protein LOC111779246 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 218.8 bits (556), Expect = 4.0e-53
Identity = 122/171 (71.35%), Postives = 137/171 (80.12%), Query Frame = 0

Query: 1   MFTLQILRLSELRSSIFSLLPVSNIVNLKCSRSSVSLIVSYADESHSLVASFQMFDRFFT 60
           MFTLQIL L ELRSSI  LLP+SNI NL+CS+ SVSL VSY+DESH LVA+FQMFD FFT
Sbjct: 1   MFTLQILGLGELRSSIVQLLPLSNIANLRCSKFSVSLTVSYSDESHFLVAAFQMFDPFFT 60

Query: 61  TFSAPDGIYNFDIDLQELSHLILSDDLLLTILVPTVVSSPTLISSTRDGDFRSLALLSAM 120
            FSA DG YN +IDLQELS +IL DDL LTILVP+VVSS +LIS TRDG+FRSLALL AM
Sbjct: 61  IFSARDGNYNLNIDLQELSQIILEDDLFLTILVPSVVSSASLISLTRDGEFRSLALLGAM 120

Query: 121 LPQNRKVSTFDLTLFVAVDAAKLREIATRLSDENGPIYETFPLQQFLLLHR 172
            PQ+  VS FDL LFVAVDAAKLREIATRLSD+NG I+ T    Q +   +
Sbjct: 121 PPQDMTVSKFDLNLFVAVDAAKLREIATRLSDQNGTIFATASTSQVIFYEK 171

BLAST of Tan0013721 vs. NCBI nr
Match: KAG6593676.1 (hypothetical protein SDJN03_13152, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 217.2 bits (552), Expect = 1.2e-52
Identity = 120/156 (76.92%), Postives = 132/156 (84.62%), Query Frame = 0

Query: 1   MFTLQILRLSELRSSIFSLLPVSNIVNLKCSRSSVSLIVSYADESHSLVASFQMFDRFFT 60
           MFTLQIL L ELRSSI  LLP+SNI +L+CS+ SVSL VSY+DESH LVA+FQMFD FFT
Sbjct: 1   MFTLQILGLGELRSSIVQLLPLSNIAHLRCSKFSVSLTVSYSDESHFLVAAFQMFDPFFT 60

Query: 61  TFSAPDGIYNFDIDLQELSHLILSDDLLLTILVPTVVSSPTLISSTRDGDFRSLALLSAM 120
            FSA DG YN DIDLQELS +IL DDL LTILVP+VVSS +LIS TRDG+FRSLALL AM
Sbjct: 61  IFSARDGNYNLDIDLQELSQIILEDDLFLTILVPSVVSSASLISLTRDGEFRSLALLGAM 120

Query: 121 LPQNRKVSTFDLTLFVAVDAAKLREIATRLSDENGP 157
            PQ+  VS FDL LFVAVDAAKLREIATRLSD+NGP
Sbjct: 121 PPQDMTVSKFDLNLFVAVDAAKLREIATRLSDQNGP 156

BLAST of Tan0013721 vs. NCBI nr
Match: XP_011658377.1 (uncharacterized protein LOC105435978 [Cucumis sativus] >KAE8646543.1 hypothetical protein Csa_005041 [Cucumis sativus])

HSP 1 Score: 204.9 bits (520), Expect = 6.0e-49
Identity = 118/166 (71.08%), Postives = 127/166 (76.51%), Query Frame = 0

Query: 1   MFTLQILRLSELRSSIFSLLPVSNIVNLKCSRSSVSLIVSYADESHSLVASFQMFDRFFT 60
           MFTLQIL L ELRSSIFSLL VSN   L+C  SSVSL VSY+DESHS + SFQMFD FFT
Sbjct: 1   MFTLQILGLGELRSSIFSLLAVSNSATLRCFPSSVSLAVSYSDESHSFLVSFQMFDPFFT 60

Query: 61  TFSAPDGIYNFDIDLQELSHLILS-DDLLLTILVPTVVSSPTLISSTRDGDFRSLALLSA 120
            FS  DG YNFDIDLQELS LIL+ +DL LTILVP+  SS +LISSTRDG FRSLA L  
Sbjct: 61  IFSRGDGDYNFDIDLQELSRLILAEEDLFLTILVPSAFSSASLISSTRDGKFRSLASLWT 120

Query: 121 MLPQNRKVSTFDLTLFVAVDAAKLREIATRLSDENGPIYETFPLQQ 166
           MLPQNR VS FDL LFVA+DA K REI  RLSD NGPI+ T    Q
Sbjct: 121 MLPQNRGVSKFDLKLFVAIDAVKFREIVARLSDYNGPIFATASTSQ 166

BLAST of Tan0013721 vs. ExPASy TrEMBL
Match: A0A6J1HHS5 (uncharacterized protein LOC111464195 OS=Cucurbita moschata OX=3662 GN=LOC111464195 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 1.8e-54
Identity = 123/171 (71.93%), Postives = 138/171 (80.70%), Query Frame = 0

Query: 1   MFTLQILRLSELRSSIFSLLPVSNIVNLKCSRSSVSLIVSYADESHSLVASFQMFDRFFT 60
           MFTLQIL L ELRSSI  LLP+SNI NL+CS+ SVSL VSY+DESH LVA+FQMFD FFT
Sbjct: 1   MFTLQILGLGELRSSIVQLLPLSNIANLRCSKFSVSLTVSYSDESHFLVAAFQMFDPFFT 60

Query: 61  TFSAPDGIYNFDIDLQELSHLILSDDLLLTILVPTVVSSPTLISSTRDGDFRSLALLSAM 120
            FSA DG YN DIDLQELS +IL DDL LTILVP+VVSS +LIS TRDG+FRSLALL A+
Sbjct: 61  IFSARDGNYNLDIDLQELSQIILEDDLFLTILVPSVVSSASLISLTRDGEFRSLALLGAV 120

Query: 121 LPQNRKVSTFDLTLFVAVDAAKLREIATRLSDENGPIYETFPLQQFLLLHR 172
            PQ+  VS FDL LFVAVDAAKLREIATRLSD+NGPI+ T    Q +   +
Sbjct: 121 PPQDMTVSKFDLNLFVAVDAAKLREIATRLSDQNGPIFATASTSQVIFYEK 171

BLAST of Tan0013721 vs. ExPASy TrEMBL
Match: A0A0A0K7E6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002880 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 3.7e-28
Identity = 80/115 (69.57%), Postives = 88/115 (76.52%), Query Frame = 0

Query: 1   MFTLQILRLSELRSSIFSLLPVSNIVNLKCSRSSVSLIVSYADESHSLVASFQMFDRFFT 60
           MFTLQIL L ELRSSIFSLL VSN   L+C  SSVSL VSY+DESHS + SFQMFD FFT
Sbjct: 1   MFTLQILGLGELRSSIFSLLAVSNSATLRCFPSSVSLAVSYSDESHSFLVSFQMFDPFFT 60

Query: 61  TFSAPDGIYNFDIDLQELSHLILS-DDLLLTILVPTVVSSPTLISSTRDGDFRSL 115
            FS  DG YNFDIDLQELS LIL+ +DL LTILVP+  SS +LISST    FR +
Sbjct: 61  IFSRGDGDYNFDIDLQELSRLILAEEDLFLTILVPSAFSSASLISSTSTFGFRKI 115

BLAST of Tan0013721 vs. ExPASy TrEMBL
Match: A0A6J1HGU2 (uncharacterized protein LOC111464209 OS=Cucurbita moschata OX=3662 GN=LOC111464209 PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.3e-20
Identity = 69/164 (42.07%), Postives = 98/164 (59.76%), Query Frame = 0

Query: 6   ILRLSELRSSIFSLLPVSNIVNLKCSRSSVSLIVSYADESHSLVASFQMFDRFFTTFS-A 65
           +L L  LR+SI SLL +SN    KCS  S+SL VSY  + ++ ++  ++FDRFFT FS  
Sbjct: 220 VLGLGLLRNSISSLLTLSNSAEFKCSPQSMSLTVSYTHKFYNFISVLRIFDRFFTIFSFG 279

Query: 66  P--------DGIYNFDIDLQELSHLILSDDLLLTILVPTVVSSPTLISSTRDGDFRSLAL 125
           P        D  Y F+I L +    I  +D  L IL+P   +S  ++S+TR G+FRSLA 
Sbjct: 280 PNANANADIDADYAFEIQLSDFFRHIPDEDSHLVILIPKSCTSLNVLSATRSGNFRSLAS 339

Query: 126 LSAMLPQNRKVSTFDLTLFVAVDAAKLREIATRLSDENGPIYET 161
           L A   +N +V  FDL LFVA++A K R+I T L+++  P+  T
Sbjct: 340 LVATPSENEEVGQFDLKLFVAIEAEKFRKIITTLAEDGDPVLGT 383

BLAST of Tan0013721 vs. ExPASy TrEMBL
Match: A0A5D3BTF3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00960 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 5.6e-08
Identity = 43/71 (60.56%), Postives = 46/71 (64.79%), Query Frame = 0

Query: 54  MFDRFFTTFSAPDGIYNFDIDLQELSHLILS-DDLLLTILVPTVVSSPTLISSTRDGDFR 113
           MFD FFT FSA DG YNF+IDLQELS LIL+ DDL LTILVP            RDG FR
Sbjct: 1   MFDPFFTIFSAGDGDYNFNIDLQELSRLILADDDLFLTILVP------------RDGKFR 59

Query: 114 SLALLSAMLPQ 124
           SLA L    P+
Sbjct: 61  SLASLDDASPK 59

BLAST of Tan0013721 vs. ExPASy TrEMBL
Match: A0A0A0K9X2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002380 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.4e-06
Identity = 31/46 (67.39%), Postives = 33/46 (71.74%), Query Frame = 0

Query: 120 MLPQNRKVSTFDLTLFVAVDAAKLREIATRLSDENGPIYETFPLQQ 166
           MLPQNR VS FDL LFVA+DA K REI  RLSD NGPI+ T    Q
Sbjct: 1   MLPQNRGVSKFDLKLFVAIDAVKFREIVARLSDYNGPIFATASTSQ 46

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
XP_022964051.13.7e-5471.93uncharacterized protein LOC111464195 [Cucurbita moschata][more]
KAG7026010.14.8e-5471.93hypothetical protein SDJN02_12508, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023515127.14.0e-5371.35uncharacterized protein LOC111779246 [Cucurbita pepo subsp. pepo][more]
KAG6593676.11.2e-5276.92hypothetical protein SDJN03_13152, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_011658377.16.0e-4971.08uncharacterized protein LOC105435978 [Cucumis sativus] >KAE8646543.1 hypothetica... [more]
Match NameE-valueIdentityDescription
A0A6J1HHS51.8e-5471.93uncharacterized protein LOC111464195 OS=Cucurbita moschata OX=3662 GN=LOC1114641... [more]
A0A0A0K7E63.7e-2869.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002880 PE=4 SV=1[more]
A0A6J1HGU21.3e-2042.07uncharacterized protein LOC111464209 OS=Cucurbita moschata OX=3662 GN=LOC1114642... [more]
A0A5D3BTF35.6e-0860.56Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0K9X21.4e-0667.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002380 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0013721.1Tan0013721.1mRNA