Tan0013717 (gene) Snake gourd v1

Overview


Name	Tan0013717
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	CCHC-type domain-containing protein
Location	LG09: 55520901 .. 55525119 (+)
RNA-Seq Expression	Tan0013717
Synteny	Tan0013717

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAATGACAAGTTATTTTCGATGTCAGTTGAGTCAAAAATCTACTCCAACCAATTGATAATCACCCCTAACTAGTGAAACAAATTTCAAGCAACGTGTTGATATTTTAGTTGACATGTTGTTATGTCAACATAGTGGACATATCGAGATTTAGGGTTGATACATTAAATATTAAAATGATTAATATATATTAGATATATATTAAAGAAGAATATAAGATTCAAATAGTGGTAGCGAAGGGACCCTTTTCTATCTCTCGTAGAAAAGAAAAGTGTGGTCGTCTGGGGGCAGCTTGGTGCTGGGTTTTGGGAGCTTGGTTCTGGGTTTTGGGGATCCTTGTGATCTTGTGGGTTTTTTGCTTTCGGGGGTTTGATCCGCCTTCGTGTGGTCTTTATCTGGTGTTTCCATCGAGGAGTGAAGGAAATGAGGTGTTTTTTCTTTTTGAAGGAGTTCTAGGGTTTTGATAATGGATGATGAAAAATTCAACCAATTTATGGCCAAAATGAAGCTAACTGAAGAGGATAACATAACGACGGACATTGCAGATGACGATATCGACGAAGCAGAGAAGAAGATGAAGTGTATTGTGGCCTGTAAAATTATAATGAATAGATCTATTAAAGCAGAGGTTTTTACACAACTCATTCCGAAGATTTGGAGCTTGGAAGGCAAAGTGGCGGTGGAAAAAGTAGGGCATAACCTTTTCTTGTGCTACTTCAACAACGAAAGGGAGAAGAGGCAGACGATGTCAAGTGGGCCTTGGTTTTTCGATAAATGTCTGATTGTTTTCGAAGAACCAAGAGGGAATAACTACCTCTCGACTCTGGAGTTAAGGTACGAATCATTTTGGGTCCAATTTCATAATCTACCTATTGCAGGTCACATGATCAAAATGGCGCGAGTTCTTAGAAATCTGGTGGGCTCTTTTGAACGTGTTGATCTGGAAGAAGGGGGCGTAGGTTATCTCAAAATATTAGGGTGAAAATTCAAATAGATTTGCAGAAACCGCTAAAGAGGGGAGTTAAGATCAAGAACGGATCGATGGCTGAAGAAAAATGGATCATGGTATCCTATGAAAAATTAGGTGATTTTTGTTATGGGTGTGGCATAATAGGTCATCTTCTAAAGAACTGTGAAACACACAAAAACACTCATGAGGCTGAGCTTTTATTTGGGTCGTGGATGAGGCAAAGATGTGGTGGGGGTCTCAAAAAGAAGAGAGAACAGAGGTTTAATTTGGGGAAATCCGATCGGAAGGCAGAGACGGTATAAATCAAGGAGAAGATTGAAAGGAAAAATTGATGGGAATCTTAATACGAACCAGATATGCTAATTGGAAACAGATCGACAAACAATGGAGGTTCGAAGAAATGGTGAAGGTAACGATCACCGAAAAGTTGAGGTAGAGGCGGTGCCGGAGACACAAGATTTGAGACGAGAGAGACAGGTTGAAAAGGATGTGACAAAAATAATGAGTGAAAATTTGCTTGTTGCCTTAGAGAAAGATCAGGCTAACGGACTGAAGGGAATGAAAATCCTCGCGCAACGGAAGACGATCGAATCGTCAAAGGTATCGTTACGTTACTTGATTTTTGTTAAAACGATCTAACTCTTAGATCTAAGTTAAACATGTAAAGAATGAAGAAATTACAGCAAGAAGAACTCTACTTACTTGTTGTAGACTTTTCTTCAAAGTTCCTTCCTTGCTCACGAACACTTCGTGCTTCTCGATCTCAACGAATGCTTCTCTCGAACGAAAACTGAACACCACCAATTGGAACCTTGGTTGTTCTTCTTTTGGAAAAAAGGAGAATGGTGGGATTCTATGTGTTTTGGAGAGGGAGGAGAGTTGAGAGAGTTGAGAGAATTCTTAATCTCTTCTCTTTGATGAAAATCAAAAAATGAGAGAATGAGTTACCAATCCCTTCTTGCAAAGGGTTTAAATAGTGGAAATTGATGGAGTTAAAATCTCCACATTATTACCACTTTACTATTAACCATAGGTTATGCAAATCTCATTTGCATAACCATATAATATAAGATATCTCATATCTCATATTGCAAATCACATTTGCAATAATTGTGGATTAATTAAATTGAATCACATCCAATTTAATTTCTCTCAATTAATTTCTCCAATTAACCCTAATTCAACAATTAGGCTAACCTATAGTTTATTATGAATCTCATTCACATTAAACTATATATTATATCATTCATATCTCATATAAATGACATAAATGCCCTTTAAGTAAAATTGAACACTTCAATTTCATACCAAAACATTAACCCTTCTTTTAACCCAGATTGAGCCAACCGAGGGACCTAATGGACCTACGATGTGACAGCTCCAATGATCTCGAGATTAACTCGTCAAACTTTTTGACCGGTTAATCAACATTCATTAGCTACGGTAACACTCCACTATAGCCCGTAGCCGCACTCGTCGATGTAGAATATTACGTGTCCACCGATATAACCAATGCCCATGAGTCGACCCTTTACAGGTTGTTCGTAGACACGGCTGGGTCAAATTATCGTTTTACCCCTGTGTCTACCTCTTGCTCCTTAAGTCCCACTGCTCCTCTAATGAACAACTACGTTGCATGGTCCAACTATAAACAACAACCCTCTCGTGCCAATGAGAGAGTGGGCCCCGTTGTTAAAGCCCCGAGACAAGGTAGTTAATGGAACAACCCTCTAGTTTCCCTAAAGCGGAACGCAGTGAATTCCTTCTTGCGTAGTCAAGTTTCCAGCTCCCACGTGTTCCTCGCCCCGAGAAGATAGGCATATTGGGCGAGCAGCGGTGGCCATCCTCACCCGTACTAGTCAAAGGACAGAGCCCCGCAGACAGGAGTCTGTGACACGCTCAAGATTAAGGTCGAGTCACTAATGGTCATCTACGAATTTATTAGCTCTATACATTAGCGGTGTTACATCGATGAAGTCTAATAATTCACGGTCCCGATCTTGTACAATCTCATTGCACAGATGCCCCACTCGCATGTCAACCACATGAACGAGTTAGATCACCTCGTTTGTATCTAATACAAAGCGGGCCGCATCCACAATGTATCCAGGATTAGGTCTCCAACCCTATCCATATACTGTAGACCGTTCGGGTCATTAACTCGAACGTGATCCTCCCTGTGTGTCCATTACACACCGTTCAAGTTGTTAGTTCTCTCATAATGCAATGACCCTGGAGCTTAGTTTATTGGATTAAGTTTATGAAAAAAGCGAGACACAAAGTTTAAATAAATAACTCTTATTTATTACACAATGTTGAAATAAATAACTCTTATTCATTTACAACTTGGAATATTACAAACTACACGAGATGAGGACATACATCCCAACAGAAGGGATTTTTAACATAGTGGGCCAAATGGAGGGTTGAAGTGAGTTATCCACCACCAAAATTGGGTCAAGGCAAAACCAAAGTGGGTTGGATAATACAAAGGAAATTTCTTCAAGCAAACCAATTGAAAATACAATTGAAGTAAAGAACTAGGGACTATATTCGGAACAAGAGGCGGTCGGTGGGCTAGATGAAAGAATTGCACAAAATTCGCGGGCAACTCAAATTTTAAAGGCAGGAACGACTAGTGGTATGGTTTTAAATGCTCCAGATCCAAAAGGGGAAATGAAATCTCAATAAATCTCTGTTAAAATATGGAAGAGGGGGGCCAGAGAAGATAAAGGGAAAGATGAAGTAAAGGAGATTAATCCAGTGGGAAAGAAACATGGTTTGTTTCATCCAGAATTTTCTCAAGTCCAAAAGGGGATTTGCACGGAAGAAAAGGTACATGAGTTGATATTGGTGGAGGTTGTTAAGCAACCCCGCCGGACGCCATGAAAACTCTTTGTTGGAATGTCTGGGGTTTGGAGAATCCTCAGGCATTCCGTCAACTACGCATTTTAGTTGGCAAGGAAAATCCTCAAATAGTGTTCTTATCGGAAACTAAACTTAAAAGTGGGTTTGAAGGGAAGTTCAAGACAGAGCTAGGAATGGTTGGTTGTTTCTGTGTGGATAGCAAAGGTAAGGGGGGTGGGCTCATGTTGTTATGGCAAGACTCAGTCAAAGCCGACAGAAGATCGTTTTTGCAAGGCCACATCGATTCGATGGTGGTTGCTAATGAGGGGTGCTGACGTTTCACGGGTTTCTATGGCAACCCTCAAATTGAGAATCGGAGCTCCTCATGGTAGCTTCTGA

mRNA sequence

ATGAAAAATGACAAGAGTTCTAGGGTTTTGATAATGGATGATGAAAAATTCAACCAATTTATGGCCAAAATGAAGCTAACTGAAGAGGATAACATAACGACGGACATTGCAGATGACGATATCGACGAAGCAGAGAAGAAGATGAAGTGTATTGTGGCCTGTAAAATTATAATGAATAGATCTATTAAAGCAGAGGTTTTTACACAACTCATTCCGAAGATTTGGAGCTTGGAAGGCAAAGTGGCGGTGGAAAAAGTAGGGCATAACCTTTTCTTGTGCTACTTCAACAACGAAAGGGAGAAGAGGCAGACGATGTCAAGTGGGCCTTGGTTTTTCGATAAATGTCTGATTGTTTTCGAAGAACCAAGAGGGAATAACTACCTCTCGACTCTGGAGTTAAGGTTATCTCAAAATATTAGGGTGAAAATTCAAATAGATTTGCAGAAACCGCTAAAGAGGGGAGTTAAGATCAAGAACGGATCGATGGCTGAAGAAAAATGGATCATGGTATCCTATGAAAAATTAGGTGATTTTTGTTATGGGTGTGGCATAATAGGTCATCTTCTAAAGAACTGTGAAACACACAAAAACACTCATGAGGCTGAGCTTTTATTTGGGTCGTGGATGAGGCAAAGATATCGACAAACAATGGAGGTTCGAAGAAATGGTGAAGGTAACGATCACCGAAAAGTTGAGGTAGAGGCGGTGCCGGAGACACAAGATTTGAGACGAGAGAGACAGAGGGGGGCCAGAGAAGATAAAGGGAAAGATGAAGTAAAGGAGATTAATCCAGTGGGAAAGAAACATGGTTTGTTTCATCCAGAATTTTCTCAAGTCCAAAAGGGGATTTGCACGGAAGAAAAGACTCAGTCAAAGCCGACAGAAGATCGTTTTTGCAAGGCCACATCGATTCGATGGTGGTTGCTAATGAGGGGTGCTGACGTTTCACGGGTTTCTATGGCAACCCTCAAATTGAGAATCGGAGCTCCTCATGGTAGCTTCTGA

Coding sequence (CDS)

ATGAAAAATGACAAGAGTTCTAGGGTTTTGATAATGGATGATGAAAAATTCAACCAATTTATGGCCAAAATGAAGCTAACTGAAGAGGATAACATAACGACGGACATTGCAGATGACGATATCGACGAAGCAGAGAAGAAGATGAAGTGTATTGTGGCCTGTAAAATTATAATGAATAGATCTATTAAAGCAGAGGTTTTTACACAACTCATTCCGAAGATTTGGAGCTTGGAAGGCAAAGTGGCGGTGGAAAAAGTAGGGCATAACCTTTTCTTGTGCTACTTCAACAACGAAAGGGAGAAGAGGCAGACGATGTCAAGTGGGCCTTGGTTTTTCGATAAATGTCTGATTGTTTTCGAAGAACCAAGAGGGAATAACTACCTCTCGACTCTGGAGTTAAGGTTATCTCAAAATATTAGGGTGAAAATTCAAATAGATTTGCAGAAACCGCTAAAGAGGGGAGTTAAGATCAAGAACGGATCGATGGCTGAAGAAAAATGGATCATGGTATCCTATGAAAAATTAGGTGATTTTTGTTATGGGTGTGGCATAATAGGTCATCTTCTAAAGAACTGTGAAACACACAAAAACACTCATGAGGCTGAGCTTTTATTTGGGTCGTGGATGAGGCAAAGATATCGACAAACAATGGAGGTTCGAAGAAATGGTGAAGGTAACGATCACCGAAAAGTTGAGGTAGAGGCGGTGCCGGAGACACAAGATTTGAGACGAGAGAGACAGAGGGGGGCCAGAGAAGATAAAGGGAAAGATGAAGTAAAGGAGATTAATCCAGTGGGAAAGAAACATGGTTTGTTTCATCCAGAATTTTCTCAAGTCCAAAAGGGGATTTGCACGGAAGAAAAGACTCAGTCAAAGCCGACAGAAGATCGTTTTTGCAAGGCCACATCGATTCGATGGTGGTTGCTAATGAGGGGTGCTGACGTTTCACGGGTTTCTATGGCAACCCTCAAATTGAGAATCGGAGCTCCTCATGGTAGCTTCTGA

Protein sequence

MKNDKSSRVLIMDDEKFNQFMAKMKLTEEDNITTDIADDDIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPWFFDKCLIVFEEPRGNNYLSTLELRLSQNIRVKIQIDLQKPLKRGVKIKNGSMAEEKWIMVSYEKLGDFCYGCGIIGHLLKNCETHKNTHEAELLFGSWMRQRYRQTMEVRRNGEGNDHRKVEVEAVPETQDLRRERQRGAREDKGKDEVKEINPVGKKHGLFHPEFSQVQKGICTEEKTQSKPTEDRFCKATSIRWWLLMRGADVSRVSMATLKLRIGAPHGSF

Homology

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BLAST of Tan0013717 vs. NCBI nr
Match: TXG51459.1 (hypothetical protein EZV62_023983 [Acer yangbiense])

HSP 1 Score: 136.0 bits (341), Expect = 6.1e-28
Identity = 82/266 (30.83%), Postives = 135/266 (50.75%), Query Frame = 0


Query: 12  MDDEKFNQFMAKMKLTEEDNITTDIADDDIDEAEKKMKCIVACKIIMNRSIKAEVFTQLI 71
           M + K  +    + L +ED    +++++D  + E ++   +  KI+ ++ +  E F  LI
Sbjct: 1   MVESKIVKLYENLSLADEDGAIHEMSEEDQRDGEAEVDLCLVGKILSSKRVNREAFKNLI 60

Query: 72  PKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPWFFDKCLIVFEEPRGNNYLSTL 131
            ++WS  G V +E +G N+F+ +FNN+ E+ +    GPW+FDK LIV E+P G       
Sbjct: 61  EQLWSPFGSVEIESMGLNIFMFHFNNQVERNRIWQRGPWYFDKSLIVLEKPEGCVIDIPT 120

Query: 132 ELR--LSQNIRVKIQIDLQKPLKRGVKIKNGSMAEEKWIMVSYEKLGDFCYGCGIIGHLL 191
           E +    + ++VK+QID+ KPLKR +++K         + + YE+L  FCY CG IGH  
Sbjct: 121 ESKDCWGKFMKVKVQIDISKPLKRWLRLKLDKSNNIVMVSLKYERLPKFCYVCGRIGHAS 180

Query: 192 KNCETHKNTHEA----ELLFGSWMRQRYRQTMEVRRNGEGNDHRKVEVEAVPETQDLRRE 251
           KNC   +   EA       +GSWMR       +VR + +   H KV+   + E   +   
Sbjct: 181 KNCSDEEAKIEALKGESTKYGSWMRASVPDRKKVRIDHQIKGHSKVQSRGLEERSGVNEV 240

Query: 252 RQRGAREDKGKDEVKEINPVGKKHGL 272
             +  R      +V+  +P    HGL
Sbjct: 241 CLQKLRTGSWISQVE--SPTDTFHGL 264

[Close]

BLAST of Tan0013717 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 128.6 bits (322), Expect = 9.8e-26
Identity = 77/246 (31.30%), Postives = 119/246 (48.37%), Query Frame = 0


Query: 12  MDDEKFNQFMAKMKLT-EEDNITTDIADDDIDEAEKKMKCIVACKIIMNRSIKAEVFTQL 71
           MD E       K KLT EED I  D+  D +  AE+ +   +  K++  R I A+V +++
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 72  IPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPWFFDKCLIVFEEPRGNNYLST 131
           +   W +E ++ VE +G NLFL +F  E +  + M +GPWFFDK LIV ++P  +  +S 
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 132 LE-----------------------LRLSQ-------------------NIRVKIQIDLQ 191
           LE                       +RL                     ++R+++ ID+ 
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 192 KPLKRGVKIKNGSMAEEKWIMVSYEKLGDFCYGCGIIGHLLKNCETH----KNTHEAELL 211
           KPL+RG+KI         WI + YE+L DFCY CG+IGH   +C+      ++   A   
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

[Close]

BLAST of Tan0013717 vs. NCBI nr
Match: TXG48193.1 (hypothetical protein EZV62_027487 [Acer yangbiense])

HSP 1 Score: 125.9 bits (315), Expect = 6.3e-25
Identity = 70/244 (28.69%), Postives = 114/244 (46.72%), Query Frame = 0


Query: 12  MDDEKFNQFMAKMKLTEEDNITTDIADDDIDEAEKKMKCIVACKIIMNRSIKAEVFTQLI 71
           M + +  Q    + L +ED    +I +D I + ++ +   +  K++  + +  E F  LI
Sbjct: 1   MSEAEITQLYENLSLEDEDAAVHEITEDYIQDGDEDVDRCLVGKVLTGKKVNREAFKGLI 60

Query: 72  PKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPWFFDKCLIVFEEPRGNNYLSTL 131
            +IW+  G+V VE VG N F+ +F N+  + +  + GPW F K LIV E+P+G   ++ L
Sbjct: 61  EQIWNQFGQVEVELVGENTFMFHFTNKEYRNKVWNRGPWLFGKSLIVLEKPKGPGDITKL 120

Query: 132 ELRLS-----------------------------------------QNIRVKIQIDLQKP 191
           +   +                                         + +RVK+Q+D+ KP
Sbjct: 121 KFNQADFWVQIHDIPIMCMNQRTTKWLAEYIGEVVEIPTESRECWGKYVRVKVQVDITKP 180

Query: 192 LKRGVKIKNGSMAEEKWIMVSYEKLGDFCYGCGIIGHLLKNCETHKNTHEA----ELLFG 211
           LKR ++IK G   E   + + YE+L DFC+ CG IGH ++ C        A    +  FG
Sbjct: 181 LKRWLRIKLGKYEEITMVALKYERLPDFCFACGRIGHSVRECLDEDAKRAALDGQQTKFG 240

[Close]

BLAST of Tan0013717 vs. NCBI nr
Match: TXG53376.1 (hypothetical protein EZV62_022545 [Acer yangbiense])

HSP 1 Score: 125.9 bits (315), Expect = 6.3e-25
Identity = 93/321 (28.97%), Postives = 140/321 (43.61%), Query Frame = 0


Query: 24  MKLTEEDNITTDIADD-DIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVA 83
           + L EED +  +++++  ID  +   +C+V  K++  + +  E F  LI +IWS  G+V 
Sbjct: 13  LSLAEEDGVVLEMSEETSIDGVKDVNRCLVG-KVLSYKKVNREAFKGLIEQIWSPFGQVE 72

Query: 84  VEKVGHNLFLCYFNNEREKRQTMSSGPWFFDKCLIVFEEPRGNNYLSTLELR-------- 143
           VE VG NLF+ YFNN  ++ + +  GPW F   LIV E+  G   +S L           
Sbjct: 73  VESVGDNLFMFYFNNGEDRNRVLQRGPWHFGNSLIVLEKSTGEGNVSKLGFNRADFWVQI 132

Query: 144 -----LSQNIR----------------------------VKIQIDLQKPLKRGVKIKNGS 203
                L  N R                            VK++ID+ KPLKR +K+K G 
Sbjct: 133 HDIPILCMNRRTAKWLAKQIGEVVEIPSESRECWGKFMWVKVRIDILKPLKRWLKLKIGQ 192

Query: 204 MAEEKWIMVSYEKLGDFCYGCGIIGHLLKNC---ETHKNTHEAELL-FGSWMRQRYRQTM 263
             E   + + YEKL DFCY CG +G+ +K C   E  K   E  L  FGSW++       
Sbjct: 193 TDEVTLVSLKYEKLPDFCYACGRMGYGMKECLDEEARKMALEGPLTRFGSWLKATALDKS 252

Query: 264 EVRRNGEGNDHRKVEVEAVPETQDLRRERQRGAREDKGKDEVKEINPVGKKHGLFHPEFS 296
           + R N +GN                 R R  G   D     ++  N +  K G   P+  
Sbjct: 253 KPRLNSQGNG------------SSSDRARSSGTSHD-----IEGDNSISHKPGYLIPQRR 312

[Close]

BLAST of Tan0013717 vs. NCBI nr
Match: TXG73661.1 (hypothetical protein EZV62_002240 [Acer yangbiense])

HSP 1 Score: 123.6 bits (309), Expect = 3.1e-24
Identity = 73/229 (31.88%), Postives = 118/229 (51.53%), Query Frame = 0


Query: 12  MDDEKFNQFMAKMKLTEEDNITTDIADD-DIDEAEKKMKCIVACKIIMNRSIKAEVFTQL 71
           M + +  +    + L +ED    ++A++  ID  E   +C+V  K++  + +  + F  L
Sbjct: 1   MSEAEIAKLYENLSLADEDVAVHEMAEEVKIDGVEDVERCLVG-KVLAEKKVNRDAFKGL 60

Query: 72  IPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPWFFDKCLIVFEEPRGNNYLST 131
           I +IW+  G V +E VG N+F+ YF N  ++ +    GPW F   LIV E+P G      
Sbjct: 61  IEQIWNPFGHVEIELVGDNIFMFYFINSEDRNKVWHRGPWHFGNSLIVLEKPAGT----- 120

Query: 132 LELRLSQNIRVKIQIDLQKPLKRGVKIKNGSMAEEKWIMVSYEKLGDFCYGCGIIGHLLK 191
                 + IRV ++ID+ KPLKR +K+K G   E   + + YE+L +FC+ CG IGH +K
Sbjct: 121 -----WKFIRVNVRIDISKPLKRWLKLKLGKTEEVTRVNLKYERLPEFCFTCGRIGHGIK 180

Query: 192 NC---ETHKNTHE-AELLFGSWMRQRYRQTMEVRRN----GEGNDHRKV 232
            C   E  K   E +   FGSW++       ++R N    G  +D  ++
Sbjct: 181 GCMDEEARKTALEGSPNKFGSWLKATISDRSKLRGNVQAYGSSSDRTRI 218

[Close]

BLAST of Tan0013717 vs. ExPASy TrEMBL
Match: A0A5C7H421 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_023983 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 3.0e-28
Identity = 82/266 (30.83%), Postives = 135/266 (50.75%), Query Frame = 0


Query: 12  MDDEKFNQFMAKMKLTEEDNITTDIADDDIDEAEKKMKCIVACKIIMNRSIKAEVFTQLI 71
           M + K  +    + L +ED    +++++D  + E ++   +  KI+ ++ +  E F  LI
Sbjct: 1   MVESKIVKLYENLSLADEDGAIHEMSEEDQRDGEAEVDLCLVGKILSSKRVNREAFKNLI 60

Query: 72  PKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPWFFDKCLIVFEEPRGNNYLSTL 131
            ++WS  G V +E +G N+F+ +FNN+ E+ +    GPW+FDK LIV E+P G       
Sbjct: 61  EQLWSPFGSVEIESMGLNIFMFHFNNQVERNRIWQRGPWYFDKSLIVLEKPEGCVIDIPT 120

Query: 132 ELR--LSQNIRVKIQIDLQKPLKRGVKIKNGSMAEEKWIMVSYEKLGDFCYGCGIIGHLL 191
           E +    + ++VK+QID+ KPLKR +++K         + + YE+L  FCY CG IGH  
Sbjct: 121 ESKDCWGKFMKVKVQIDISKPLKRWLRLKLDKSNNIVMVSLKYERLPKFCYVCGRIGHAS 180

Query: 192 KNCETHKNTHEA----ELLFGSWMRQRYRQTMEVRRNGEGNDHRKVEVEAVPETQDLRRE 251
           KNC   +   EA       +GSWMR       +VR + +   H KV+   + E   +   
Sbjct: 181 KNCSDEEAKIEALKGESTKYGSWMRASVPDRKKVRIDHQIKGHSKVQSRGLEERSGVNEV 240

Query: 252 RQRGAREDKGKDEVKEINPVGKKHGL 272
             +  R      +V+  +P    HGL
Sbjct: 241 CLQKLRTGSWISQVE--SPTDTFHGL 264

[Close]

BLAST of Tan0013717 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 4.7e-26
Identity = 77/246 (31.30%), Postives = 119/246 (48.37%), Query Frame = 0


Query: 12  MDDEKFNQFMAKMKLT-EEDNITTDIADDDIDEAEKKMKCIVACKIIMNRSIKAEVFTQL 71
           MD E       K KLT EED I  D+  D +  AE+ +   +  K++  R I A+V +++
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 72  IPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPWFFDKCLIVFEEPRGNNYLST 131
           +   W +E ++ VE +G NLFL +F  E +  + M +GPWFFDK LIV ++P  +  +S 
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 132 LE-----------------------LRLSQ-------------------NIRVKIQIDLQ 191
           LE                       +RL                     ++R+++ ID+ 
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDIT 180

Query: 192 KPLKRGVKIKNGSMAEEKWIMVSYEKLGDFCYGCGIIGHLLKNCETH----KNTHEAELL 211
           KPL+RG+KI         WI + YE+L DFCY CG+IGH   +C+      ++   A   
Sbjct: 181 KPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSE 240

[Close]

BLAST of Tan0013717 vs. ExPASy TrEMBL
Match: A0A5C7HB59 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022545 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.1e-25
Identity = 93/321 (28.97%), Postives = 140/321 (43.61%), Query Frame = 0


Query: 24  MKLTEEDNITTDIADD-DIDEAEKKMKCIVACKIIMNRSIKAEVFTQLIPKIWSLEGKVA 83
           + L EED +  +++++  ID  +   +C+V  K++  + +  E F  LI +IWS  G+V 
Sbjct: 13  LSLAEEDGVVLEMSEETSIDGVKDVNRCLVG-KVLSYKKVNREAFKGLIEQIWSPFGQVE 72

Query: 84  VEKVGHNLFLCYFNNEREKRQTMSSGPWFFDKCLIVFEEPRGNNYLSTLELR-------- 143
           VE VG NLF+ YFNN  ++ + +  GPW F   LIV E+  G   +S L           
Sbjct: 73  VESVGDNLFMFYFNNGEDRNRVLQRGPWHFGNSLIVLEKSTGEGNVSKLGFNRADFWVQI 132

Query: 144 -----LSQNIR----------------------------VKIQIDLQKPLKRGVKIKNGS 203
                L  N R                            VK++ID+ KPLKR +K+K G 
Sbjct: 133 HDIPILCMNRRTAKWLAKQIGEVVEIPSESRECWGKFMWVKVRIDILKPLKRWLKLKIGQ 192

Query: 204 MAEEKWIMVSYEKLGDFCYGCGIIGHLLKNC---ETHKNTHEAELL-FGSWMRQRYRQTM 263
             E   + + YEKL DFCY CG +G+ +K C   E  K   E  L  FGSW++       
Sbjct: 193 TDEVTLVSLKYEKLPDFCYACGRMGYGMKECLDEEARKMALEGPLTRFGSWLKATALDKS 252

Query: 264 EVRRNGEGNDHRKVEVEAVPETQDLRRERQRGAREDKGKDEVKEINPVGKKHGLFHPEFS 296
           + R N +GN                 R R  G   D     ++  N +  K G   P+  
Sbjct: 253 KPRLNSQGNG------------SSSDRARSSGTSHD-----IEGDNSISHKPGYLIPQRR 312

[Close]

BLAST of Tan0013717 vs. ExPASy TrEMBL
Match: A0A5C7GU64 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_027487 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.1e-25
Identity = 70/244 (28.69%), Postives = 114/244 (46.72%), Query Frame = 0


Query: 12  MDDEKFNQFMAKMKLTEEDNITTDIADDDIDEAEKKMKCIVACKIIMNRSIKAEVFTQLI 71
           M + +  Q    + L +ED    +I +D I + ++ +   +  K++  + +  E F  LI
Sbjct: 1   MSEAEITQLYENLSLEDEDAAVHEITEDYIQDGDEDVDRCLVGKVLTGKKVNREAFKGLI 60

Query: 72  PKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPWFFDKCLIVFEEPRGNNYLSTL 131
            +IW+  G+V VE VG N F+ +F N+  + +  + GPW F K LIV E+P+G   ++ L
Sbjct: 61  EQIWNQFGQVEVELVGENTFMFHFTNKEYRNKVWNRGPWLFGKSLIVLEKPKGPGDITKL 120

Query: 132 ELRLS-----------------------------------------QNIRVKIQIDLQKP 191
           +   +                                         + +RVK+Q+D+ KP
Sbjct: 121 KFNQADFWVQIHDIPIMCMNQRTTKWLAEYIGEVVEIPTESRECWGKYVRVKVQVDITKP 180

Query: 192 LKRGVKIKNGSMAEEKWIMVSYEKLGDFCYGCGIIGHLLKNCETHKNTHEA----ELLFG 211
           LKR ++IK G   E   + + YE+L DFC+ CG IGH ++ C        A    +  FG
Sbjct: 181 LKRWLRIKLGKYEEITMVALKYERLPDFCFACGRIGHSVRECLDEDAKRAALDGQQTKFG 240

[Close]

BLAST of Tan0013717 vs. ExPASy TrEMBL
Match: A0A5C7IWJ4 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_002240 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-24
Identity = 73/229 (31.88%), Postives = 118/229 (51.53%), Query Frame = 0


Query: 12  MDDEKFNQFMAKMKLTEEDNITTDIADD-DIDEAEKKMKCIVACKIIMNRSIKAEVFTQL 71
           M + +  +    + L +ED    ++A++  ID  E   +C+V  K++  + +  + F  L
Sbjct: 1   MSEAEIAKLYENLSLADEDVAVHEMAEEVKIDGVEDVERCLVG-KVLAEKKVNRDAFKGL 60

Query: 72  IPKIWSLEGKVAVEKVGHNLFLCYFNNEREKRQTMSSGPWFFDKCLIVFEEPRGNNYLST 131
           I +IW+  G V +E VG N+F+ YF N  ++ +    GPW F   LIV E+P G      
Sbjct: 61  IEQIWNPFGHVEIELVGDNIFMFYFINSEDRNKVWHRGPWHFGNSLIVLEKPAGT----- 120

Query: 132 LELRLSQNIRVKIQIDLQKPLKRGVKIKNGSMAEEKWIMVSYEKLGDFCYGCGIIGHLLK 191
                 + IRV ++ID+ KPLKR +K+K G   E   + + YE+L +FC+ CG IGH +K
Sbjct: 121 -----WKFIRVNVRIDISKPLKRWLKLKLGKTEEVTRVNLKYERLPEFCFTCGRIGHGIK 180

Query: 192 NC---ETHKNTHE-AELLFGSWMRQRYRQTMEVRRN----GEGNDHRKV 232
            C   E  K   E +   FGSW++       ++R N    G  +D  ++
Sbjct: 181 GCMDEEARKTALEGSPNKFGSWLKATISDRSKLRGNVQAYGSSSDRTRI 218

The following BLAST results are available for this feature:

BLAST of Tan0013717 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0013717 vs. NCBI nr


Match Name	E-value	Identity	Description
TXG51459.1	6.1e-28	30.83	hypothetical protein EZV62_023983 [Acer yangbiense]	[more]
XP_022156185.1	9.8e-26	31.30	uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha...	[more]
TXG48193.1	6.3e-25	28.69	hypothetical protein EZV62_027487 [Acer yangbiense]	[more]
TXG53376.1	6.3e-25	28.97	hypothetical protein EZV62_022545 [Acer yangbiense]	[more]
TXG73661.1	3.1e-24	31.88	hypothetical protein EZV62_002240 [Acer yangbiense]	[more]

BLAST of Tan0013717 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5C7H421	3.0e-28	30.83	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02398...	[more]
A0A6J1DU55	4.7e-26	31.30	uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023...	[more]
A0A5C7HB59	3.1e-25	28.97	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022545 PE=4 SV=1	[more]
A0A5C7GU64	3.1e-25	28.69	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02748...	[more]
A0A5C7IWJ4	1.5e-24	31.88	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00224...	[more]

BLAST of Tan0013717 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 41..119 e-value: 1.7E-10 score: 40.6
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 145..193 e-value: 1.2E-13 score: 50.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..258
None	No IPR available	PANTHER	PTHR31286:SF84	SUBFAMILY NOT NAMED	coord: 137..226
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 137..226
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 179..192 score: 8.943958

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013717.1	Tan0013717.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding