Tan0013704 (gene) Snake gourd v1

Overview


Name	Tan0013704
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	RNA ligase/cyclic nucleotide phosphodiesterase
Location	LG11: 5301549 .. 5303061 (-)
RNA-Seq Expression	Tan0013704
Synteny	Tan0013704

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGAAGAACAATTCGGTCGTTCAACGCTGGTTGGCTCGGTGGTTTAAGCGGGCCGGTCGATGCCCCTTCTCTCCCCCTTTCCTCTCTCTGTCTTCCTCGTTTCGATCCACTCGGAGGACACCTAATCTGGTTCGGCTCTTAGCAAGTGGCTTTTCATCTCCCTCAGTCTCTTGCAGAGCCTTTCCTTTGATCTCTCTTTCCATTTCCCACTCATAGCTTCACTTCACCGCTTTACCTGTCTCTGTTCTTCCAGTTCTTCATCCCCTTTTCACCAACCTTCTGAAAACCTTGTCTTCAAATTTGTATTTTCCATTTCTCTTTCAGCTCTTTCTCGCATTTTTTAGGTTTTTGGGCATCTGGGTCCATCGATTTCTTCTGGGTCTTTCTGTTTTCTTCTGTTTTTTTGTGTTGTATCTCTAGGGTTTTGAATTTCCCATTTCAGATAGTTCTGATCTTCTCTTGTTTCCCGCTTTTCTTGTCTTGGAATTCGAAATTGACGTCTGGGTTTTGTTTATTTCTCCCTGTTTTTCACTAATTTAGTTCGAGGATTTTGAGTTCTAAGGCGATGTCACAAGGCTTTGCGATCGAGCTCTATTTTGATCCGGCACTTGAAAATCAGGTTCTCAAGGCTTGGAATGTACTAGCTCGCCGTCAAATTAGTACCCAACTCATCGAAATTGAATCCCGCCCTCACATTACCCTGTTCTCCAGCCCTTTTCTCGAGCCTACAAAAGTTGAATCCATCGTTAAGAATTTCGCTTCTAAACAGGAACCCTTGCCTTTGTCCTTATCGTCAATTGGCAGCCTTCCAAGTGACAACAACATTCTCTTTCTCGGTCCAGCGCCTTCGATTTCACTCCTCCAATTCCAGTCCCAATTGTGCGAAGCAATGAGGAAAGAAGGAATTGAAATCGGAGAGGAATATCGCCTTGGCTCGTGGATTCCCCATTGCGCTGTTGCTCAGGAAGTGCCCAAGGCTCGAATGGCTGAGGCATTTTGTGTTCTAAGGGATTTGAAGCTACCAGTTTCCGGGTATGCAATTGATATTGGGTTGGTGGAATTTTCCCCTGTTCGAGAGCTGTTCTCTTTTGTTCTTGGTAACACTGTCGAAGCTTGAAGCTTTGACGCCATTATTGTGCTTTAATCTGATAGTTCTTCCCTGTGAACTTGTACAACCTTAAATTTATTGTAGCTGTTTTAGAGGTCCTATTTAGACGCAGGAGCATTACAAATAAGGATGCATTTTGTATTTTGTGTTATGAATTTGATCCTTTTTCATTTGTCTTCATATTAAAGTTGAATCTTACTTGTTAGTGCATTTAATAAACACATTTGATTTGATGATTAGTGAGTGAGGGGAAAAAACCTTCTGGGTTGGTTCACTTGGCTGAACTTGTTGTGGGTTCTTTGAAATGATTCTTGTCTTCACAATTTACATTGTAGATGATAACCTTTCATTGGTTCTTTTGAAATGAATGTTAAAGGTTTAGACCTTTCACATATAACTGCTCT

mRNA sequence

GTTGAAGAACAATTCGGTCGTTCAACGCTGGTTGGCTCGGTGGTTTAAGCGGGCCGGTCGATGCCCCTTCTCTCCCCCTTTCCTCTCTCTGTCTTCCTCGTTTCGATCCACTCGGAGGACACCTAATCTGGTTCGGCTCTTAGCAAGTGGCTTTTCATCTCCCTCAGTCTCTTGCAGAGCCTTTCCTTTGATCTCTCTTTCCATTTCCCACTCATAGCTTCACTTCACCGCTTTACCTGTCTCTGTTCTTCCAGTTCTTCATCCCCTTTTCACCAACCTTCTGAAAACCTTGTCTTCAAATTTGTATTTTCCATTTCTCTTTCAGCTCTTTCTCGCATTTTTTAGGTTTTTGGGCATCTGGGTCCATCGATTTCTTCTGGGTCTTTCTGTTTTCTTCTGTTTTTTTGTGTTGTATCTCTAGGGTTTTGAATTTCCCATTTCAGATAGTTCTGATCTTCTCTTGTTTCCCGCTTTTCTTGTCTTGGAATTCGAAATTGACGTCTGGGTTTTGTTTATTTCTCCCTGTTTTTCACTAATTTAGTTCGAGGATTTTGAGTTCTAAGGCGATGTCACAAGGCTTTGCGATCGAGCTCTATTTTGATCCGGCACTTGAAAATCAGGTTCTCAAGGCTTGGAATGTACTAGCTCGCCGTCAAATTAGTACCCAACTCATCGAAATTGAATCCCGCCCTCACATTACCCTGTTCTCCAGCCCTTTTCTCGAGCCTACAAAAGTTGAATCCATCGTTAAGAATTTCGCTTCTAAACAGGAACCCTTGCCTTTGTCCTTATCGTCAATTGGCAGCCTTCCAAGTGACAACAACATTCTCTTTCTCGGTCCAGCGCCTTCGATTTCACTCCTCCAATTCCAGTCCCAATTGTGCGAAGCAATGAGGAAAGAAGGAATTGAAATCGGAGAGGAATATCGCCTTGGCTCGTGGATTCCCCATTGCGCTGTTGCTCAGGAAGTGCCCAAGGCTCGAATGGCTGAGGCATTTTGTGTTCTAAGGGATTTGAAGCTACCAGTTTCCGGGTATGCAATTGATATTGGGTTGGTGGAATTTTCCCCTGTTCGAGAGCTGTTCTCTTTTGTTCTTGGTAACACTGTCGAAGCTTGAAGCTTTGACGCCATTATTGTGCTTTAATCTGATAGTTCTTCCCTGTGAACTTGTACAACCTTAAATTTATTGTAGCTGTTTTAGAGGTCCTATTTAGACGCAGGAGCATTACAAATAAGGATGCATTTTGTATTTTGTGTTATGAATTTGATCCTTTTTCATTTGTCTTCATATTAAAGTTGAATCTTACTTGTTAGTGCATTTAATAAACACATTTGATTTGATGATTAGTGAGTGAGGGGAAAAAACCTTCTGGGTTGGTTCACTTGGCTGAACTTGTTGTGGGTTCTTTGAAATGATTCTTGTCTTCACAATTTACATTGTAGATGATAACCTTTCATTGGTTCTTTTGAAATGAATGTTAAAGGTTTAGACCTTTCACATATAACTGCTCT

Coding sequence (CDS)

ATGTCACAAGGCTTTGCGATCGAGCTCTATTTTGATCCGGCACTTGAAAATCAGGTTCTCAAGGCTTGGAATGTACTAGCTCGCCGTCAAATTAGTACCCAACTCATCGAAATTGAATCCCGCCCTCACATTACCCTGTTCTCCAGCCCTTTTCTCGAGCCTACAAAAGTTGAATCCATCGTTAAGAATTTCGCTTCTAAACAGGAACCCTTGCCTTTGTCCTTATCGTCAATTGGCAGCCTTCCAAGTGACAACAACATTCTCTTTCTCGGTCCAGCGCCTTCGATTTCACTCCTCCAATTCCAGTCCCAATTGTGCGAAGCAATGAGGAAAGAAGGAATTGAAATCGGAGAGGAATATCGCCTTGGCTCGTGGATTCCCCATTGCGCTGTTGCTCAGGAAGTGCCCAAGGCTCGAATGGCTGAGGCATTTTGTGTTCTAAGGGATTTGAAGCTACCAGTTTCCGGGTATGCAATTGATATTGGGTTGGTGGAATTTTCCCCTGTTCGAGAGCTGTTCTCTTTTGTTCTTGGTAACACTGTCGAAGCTTGA

Protein sequence

MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA

Homology

[Close]

BLAST of Tan0013704 vs. NCBI nr
Match: XP_004142350.1 (uncharacterized protein LOC101208638 [Cucumis sativus] >XP_008458738.1 PREDICTED: uncharacterized protein LOC103498055 [Cucumis melo] >KAA0037479.1 RNA ligase/cyclic nucleotide phosphodiesterase [Cucumis melo var. makuwa] >KGN52392.1 hypothetical protein Csa_007965 [Cucumis sativus] >TYK01955.1 RNA ligase/cyclic nucleotide phosphodiesterase [Cucumis melo var. makuwa])

HSP 1 Score: 358.2 bits (918), Expect = 4.2e-95
Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI 60
           MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESI
Sbjct: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60

Query: 61  VKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           VKNFASKQEPL LSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY
Sbjct: 61  VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180
           RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT
Sbjct: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180

Query: 181 VEA 184
           VEA
Sbjct: 181 VEA 183

[Close]

BLAST of Tan0013704 vs. NCBI nr
Match: XP_022993671.1 (uncharacterized protein LOC111489594 [Cucurbita maxima] >XP_023551692.1 uncharacterized protein LOC111809459 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358.2 bits (918), Expect = 4.2e-95
Identity = 180/183 (98.36%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI 60
           MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI
Sbjct: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI 60

Query: 61  VKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           VKNFASKQEPLPLSLSSIGSLPSDNN+LFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY
Sbjct: 61  VKNFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180
           R GSWIPHCAVAQEVP+ARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT
Sbjct: 121 RPGSWIPHCAVAQEVPRARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180

Query: 181 VEA 184
           VEA
Sbjct: 181 VEA 183

[Close]

BLAST of Tan0013704 vs. NCBI nr
Match: XP_038890563.1 (uncharacterized protein LOC120080080 [Benincasa hispida])

HSP 1 Score: 358.2 bits (918), Expect = 4.2e-95
Identity = 180/183 (98.36%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI 60
           MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESI
Sbjct: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60

Query: 61  VKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           VKNFASKQEPLPLSLSSIGSLPSD+NILFLGPAPSISLLQFQSQLC+AMRKEGIEIGEEY
Sbjct: 61  VKNFASKQEPLPLSLSSIGSLPSDSNILFLGPAPSISLLQFQSQLCDAMRKEGIEIGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180
           RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT
Sbjct: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180

Query: 181 VEA 184
           VEA
Sbjct: 181 VEA 183

[Close]

BLAST of Tan0013704 vs. NCBI nr
Match: XP_022939795.1 (uncharacterized protein LOC111445566 [Cucurbita moschata] >KAG6578632.1 hypothetical protein SDJN03_23080, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 357.1 bits (915), Expect = 9.3e-95
Identity = 179/183 (97.81%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI 60
           MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI
Sbjct: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI 60

Query: 61  VKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           VKNFASKQEPLPLSLSSIGSLPSDNN+LFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY
Sbjct: 61  VKNFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180
           R GSWIPHC+VAQEVP+ARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT
Sbjct: 121 RPGSWIPHCSVAQEVPRARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180

Query: 181 VEA 184
           VEA
Sbjct: 181 VEA 183

[Close]

BLAST of Tan0013704 vs. NCBI nr
Match: XP_022964210.1 (uncharacterized protein LOC111464296 [Cucurbita moschata] >KAG6602451.1 hypothetical protein SDJN03_07684, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033135.1 hypothetical protein SDJN02_07188, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 357.1 bits (915), Expect = 9.3e-95
Identity = 179/183 (97.81%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI 60
           MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI
Sbjct: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI 60

Query: 61  VKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           VKNFASKQEPLPLSL+SIGSLP+DNNILFLGPAPSISLLQFQSQLCEAMRKEGIE GEEY
Sbjct: 61  VKNFASKQEPLPLSLASIGSLPNDNNILFLGPAPSISLLQFQSQLCEAMRKEGIETGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180
           RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT
Sbjct: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180

Query: 181 VEA 184
           +EA
Sbjct: 181 LEA 183

[Close]

BLAST of Tan0013704 vs. ExPASy TrEMBL
Match: A0A5A7T7Y4 (RNA ligase/cyclic nucleotide phosphodiesterase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00470 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.0e-95
Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI 60
           MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESI
Sbjct: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60

Query: 61  VKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           VKNFASKQEPL LSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY
Sbjct: 61  VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180
           RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT
Sbjct: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180

Query: 181 VEA 184
           VEA
Sbjct: 181 VEA 183

[Close]

BLAST of Tan0013704 vs. ExPASy TrEMBL
Match: A0A6J1JWZ6 (uncharacterized protein LOC111489594 OS=Cucurbita maxima OX=3661 GN=LOC111489594 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.0e-95
Identity = 180/183 (98.36%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI 60
           MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI
Sbjct: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI 60

Query: 61  VKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           VKNFASKQEPLPLSLSSIGSLPSDNN+LFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY
Sbjct: 61  VKNFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180
           R GSWIPHCAVAQEVP+ARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT
Sbjct: 121 RPGSWIPHCAVAQEVPRARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180

Query: 181 VEA 184
           VEA
Sbjct: 181 VEA 183

[Close]

BLAST of Tan0013704 vs. ExPASy TrEMBL
Match: A0A0A0KVB2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630940 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.0e-95
Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI 60
           MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESI
Sbjct: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60

Query: 61  VKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           VKNFASKQEPL LSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY
Sbjct: 61  VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180
           RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT
Sbjct: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180

Query: 181 VEA 184
           VEA
Sbjct: 181 VEA 183

[Close]

BLAST of Tan0013704 vs. ExPASy TrEMBL
Match: A0A1S3C834 (uncharacterized protein LOC103498055 OS=Cucumis melo OX=3656 GN=LOC103498055 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.0e-95
Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI 60
           MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS+PFLEPTKVESI
Sbjct: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSTPFLEPTKVESI 60

Query: 61  VKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           VKNFASKQEPL LSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY
Sbjct: 61  VKNFASKQEPLALSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180
           RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT
Sbjct: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180

Query: 181 VEA 184
           VEA
Sbjct: 181 VEA 183

[Close]

BLAST of Tan0013704 vs. ExPASy TrEMBL
Match: A0A6J1FNR7 (uncharacterized protein LOC111445566 OS=Cucurbita moschata OX=3662 GN=LOC111445566 PE=4 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 4.5e-95
Identity = 179/183 (97.81%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI 60
           MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI
Sbjct: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI 60

Query: 61  VKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           VKNFASKQEPLPLSLSSIGSLPSDNN+LFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY
Sbjct: 61  VKNFASKQEPLPLSLSSIGSLPSDNNVLFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180
           R GSWIPHC+VAQEVP+ARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT
Sbjct: 121 RPGSWIPHCSVAQEVPRARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180

Query: 181 VEA 184
           VEA
Sbjct: 181 VEA 183

[Close]

BLAST of Tan0013704 vs. TAIR 10
Match: AT5G40190.1 (RNA ligase/cyclic nucleotide phosphodiesterase family protein )

HSP 1 Score: 279.3 bits (713), Expect = 2.3e-75
Identity = 130/183 (71.04%), Postives = 160/183 (87.43%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESI 60
           MS+G+AIELYFDPALENQVLKAWNV ARRQIST+LI  ESRPHITLFS+ F + T++ES+
Sbjct: 1   MSEGYAIELYFDPALENQVLKAWNVFARRQISTKLINTESRPHITLFSTSFFDSTRLESV 60

Query: 61  VKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEY 120
           +KNF SKQEP+ +S S+IGS  SDNN+LFL P PS+SLLQ Q+QLC+ ++KE ++IGEEY
Sbjct: 61  IKNFVSKQEPISISFSTIGSFSSDNNVLFLSPTPSLSLLQLQTQLCDMLKKESVDIGEEY 120

Query: 121 RLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNT 180
           R+ SW+P C VA +VPK+RMAEAF VLRDLKLPV+GY ++IGLVEFSPVRE+FSF LGNT
Sbjct: 121 RVDSWVPFCPVALDVPKSRMAEAFSVLRDLKLPVNGYGMEIGLVEFSPVREVFSFPLGNT 180

Query: 181 VEA 184
           +E+
Sbjct: 181 LES 183

[Close]

BLAST of Tan0013704 vs. TAIR 10
Match: AT3G28140.1 (RNA ligase/cyclic nucleotide phosphodiesterase family protein )

HSP 1 Score: 262.3 bits (669), Expect = 2.9e-70
Identity = 130/184 (70.65%), Postives = 155/184 (84.24%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-SPFLEPTKVES 60
           MSQG+AIELYFDPALENQVLKAWNV ARRQIST LI  ESRPHITLFS +  ++ TK+E 
Sbjct: 1   MSQGYAIELYFDPALENQVLKAWNVFARRQISTYLINNESRPHITLFSTTSSIDSTKLEP 60

Query: 61  IVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEE 120
           I+K+F+SKQEP+ LS SSIGS  SD+N LFL P PS+SL+Q Q QLCE ++KEG EIGEE
Sbjct: 61  IIKSFSSKQEPISLSFSSIGSFSSDDNALFLSPTPSLSLIQLQLQLCEVIKKEGFEIGEE 120

Query: 121 YRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGN 180
           YR+ SW+P C+VA +VPK+R++E F VLRDLKL V GYA+DIGLVEFSPVRE+FSF LGN
Sbjct: 121 YRVDSWVPFCSVAVDVPKSRISEGFLVLRDLKLLVYGYAMDIGLVEFSPVREVFSFGLGN 180

Query: 181 TVEA 184
            +E+
Sbjct: 181 NLES 184

[Close]

BLAST of Tan0013704 vs. TAIR 10
Match: AT3G28140.2 (RNA ligase/cyclic nucleotide phosphodiesterase family protein )

HSP 1 Score: 207.2 bits (526), Expect = 1.1e-53
Identity = 102/153 (66.67%), Postives = 123/153 (80.39%), Query Frame = 0


Query: 1   MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFS-SPFLEPTKVES 60
           MSQG+AIELYFDPALENQVLKAWNV ARRQIST LI  ESRPHITLFS +  ++ TK+E 
Sbjct: 1   MSQGYAIELYFDPALENQVLKAWNVFARRQISTYLINNESRPHITLFSTTSSIDSTKLEP 60

Query: 61  IVKNFASKQEPLPLSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEE 120
           I+K+F+SKQEP+ LS SSIGS  SD+N LFL P PS+SL+Q Q QLCE ++KEG EIGEE
Sbjct: 61  IIKSFSSKQEPISLSFSSIGSFSSDDNALFLSPTPSLSLIQLQLQLCEVIKKEGFEIGEE 120

Query: 121 YRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKL 153
           YR+ SW+P C+VA +VPK+R++E F V     L
Sbjct: 121 YRVDSWVPFCSVAVDVPKSRISEGFLVTSTFSL 153

The following BLAST results are available for this feature:

BLAST of Tan0013704 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0013704 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142350.1	4.2e-95	98.91	uncharacterized protein LOC101208638 [Cucumis sativus] >XP_008458738.1 PREDICTED...	[more]
XP_022993671.1	4.2e-95	98.36	uncharacterized protein LOC111489594 [Cucurbita maxima] >XP_023551692.1 uncharac...	[more]
XP_038890563.1	4.2e-95	98.36	uncharacterized protein LOC120080080 [Benincasa hispida]	[more]
XP_022939795.1	9.3e-95	97.81	uncharacterized protein LOC111445566 [Cucurbita moschata] >KAG6578632.1 hypothet...	[more]
XP_022964210.1	9.3e-95	97.81	uncharacterized protein LOC111464296 [Cucurbita moschata] >KAG6602451.1 hypothet...	[more]

BLAST of Tan0013704 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T7Y4	2.0e-95	98.91	RNA ligase/cyclic nucleotide phosphodiesterase OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1JWZ6	2.0e-95	98.36	uncharacterized protein LOC111489594 OS=Cucurbita maxima OX=3661 GN=LOC111489594...	[more]
A0A0A0KVB2	2.0e-95	98.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630940 PE=4 SV=1	[more]
A0A1S3C834	2.0e-95	98.91	uncharacterized protein LOC103498055 OS=Cucumis melo OX=3656 GN=LOC103498055 PE=...	[more]
A0A6J1FNR7	4.5e-95	97.81	uncharacterized protein LOC111445566 OS=Cucurbita moschata OX=3662 GN=LOC1114455...	[more]

BLAST of Tan0013704 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G40190.1	2.3e-75	71.04	RNA ligase/cyclic nucleotide phosphodiesterase family protein	[more]
AT3G28140.1	2.9e-70	70.65	RNA ligase/cyclic nucleotide phosphodiesterase family protein	[more]
AT3G28140.2	1.1e-53	66.67	RNA ligase/cyclic nucleotide phosphodiesterase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13563	2_5_RNA_ligase2	coord: 41..155 e-value: 9.1E-12 score: 45.2
None	No IPR available	GENE3D	3.90.1140.10	Cyclic phosphodiesterase	coord: 5..178 e-value: 2.2E-16 score: 62.0
None	No IPR available	PANTHER	PTHR36039	FAMILY NOT NAMED	coord: 1..182
IPR009097	Cyclic phosphodiesterase	SUPERFAMILY	55144	LigT-like	coord: 5..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013704.1	Tan0013704.1	mRNA