Tan0013608 (gene) Snake gourd v1

Overview


Name	Tan0013608
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Gag/pol protein
Location	LG01: 95730151 .. 95731223 (-)
RNA-Seq Expression	Tan0013608
Synteny	Tan0013608

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAATTTTCAGCAAAAATGTCTAGCTCTATAATTTCCTTATTGGGTGCGGAAAAGTTAACCGGAGAGAATATGATGACATGGAAAACAAACTCAACACTATATTGGTAGTGGATGATCTGAAGTTTGTGCTAACTGAGGAGTGTCCTCAGGTGCCAGGCTCGAATGCGTCACGAAATGTTTGTGATGCATATGATCGATGGATCAAGGCCAATGATAAGGCCAAGGTCTACATTTTGGCAAGTATGTCTGACAGATTAGCCAAGAAGCATGAGGGCATGATGACCACTAAGGAAATCATGGATTCAGTGCAGGGTATGTTTGGACAACAGTCCACACAGGCCCGACACAATGCCCTAAAGTACATTTTCAACTCGAGGATGCCAGAGGGTACATCTGTTTGGGATCATGTCCTGGATATGATGGTACACTTTAATATCGCGGAGTCGAATGGTGCTTCCATCGATGAATCGAGCCAGGTCAGCTTCATTCTGGAAACTCTTCCAAATAGTTTCCTTCAGTTTAGAAGTAATGTTGTTATGAACAAGCTTACTTTTAATCTTACCTCCCTTCTGAATGAACTCCAGACCTTTCAATCTATGATGAAAATTCAGGGATCGAAAGGTGAGGAAAATGTTGCCAATAGGAGTTATCATAGAGGTTCGACCTCTGGATCAAAAACAGTGGCTTCAATTTCTTCTAACTTGAAAGGGAAGAAGAAGAATATGAAGAAGGTTGGTAAAGGGAAACGAGCTGACAAAGCTGCCGCCTAGAAGGACAAGAAAGTCAAAGAAGTTGCTGACAAAGGAAAGTGTATCCACTGCAACGAAGACGGGCATTGGAAACGGAACTGTCCGAAGTACATTGCAGAAAAGAAGAAGGAAGGTAAATATGATTTACTTTGCTTAGAAGCTTGTTTAGTGGATAATGATAAAACTGCTTGGATACTTGATTCAGGCGCCACTAATCATTTTTGTTCTTATTTCCAGGGAATTGATTCCTGGCAGCAACCACAAAAAGGAGAGATAACACTCCGGGTTGAAAGTGAGAAGTCGTCTCAGCTGTAGCAGTAGGC

mRNA sequence

TAAATTTTCAGCAAAAATGTCTAGCTCTATAATTTCCTTATTGGGTGCGGAAAAGTTAACCGGAGAGAATATGATGACATGGAAAACAAACTCAACACTATATTGGTAGTGGATGATCTGAAGTTTGTGCTAACTGAGGAGTGTCCTCAGGTGCCAGGCTCGAATGCGTCACGAAATGTTTGTGATGCATATGATCGATGGATCAAGGCCAATGATAAGGCCAAGGTCTACATTTTGGCAAGTATGTCTGACAGATTAGCCAAGAAGCATGAGGGCATGATGACCACTAAGGAAATCATGGATTCAGTGCAGGGTATGTTTGGACAACAGTCCACACAGGCCCGACACAATGCCCTAAAGTACATTTTCAACTCGAGGATGCCAGAGGGTACATCTGTTTGGGATCATGTCCTGGATATGATGGTACACTTTAATATCGCGGAGTCGAATGGTGCTTCCATCGATGAATCGAGCCAGGTCAGCTTCATTCTGGAAACTCTTCCAAATAGTTTCCTTCAGTTTAGAAGTAATGTTGTTATGAACAAGCTTACTTTTAATCTTACCTCCCTTCTGAATGAACTCCAGACCTTTCAATCTATGATGAAAATTCAGGGATCGAAAGGTGAGGAAAATGTTGCCAATAGGAGTTATCATAGAGGTTCGACCTCTGGATCAAAAACAGTGGCTTCAATTTCTTCTAACTTGAAAGGGAAGAAGAAGAATATGAAGAAGGTTGGTAAAGGGAAACGAGCTGACAAAGCTGCCGCCTAGAAGGACAAGAAAGTCAAAGAAGTTGCTGACAAAGGAAAGTGTATCCACTGCAACGAAGACGGGCATTGGAAACGGAACTGTCCGAAGTACATTGCAGAAAAGAAGAAGGAAGGTAAATATGATTTACTTTGCTTAGAAGCTTGTTTAGTGGATAATGATAAAACTGCTTGGATACTTGATTCAGGCGCCACTAATCATTTTTGTTCTTATTTCCAGGGAATTGATTCCTGGCAGCAACCACAAAAAGGAGAGATAACACTCCGGGTTGAAAGTGAGAAGTCGTCTCAGCTGTAGCAGTAGGC

Coding sequence (CDS)

ATGGAAAACAAACTCAACACTATATTGGTAGTGGATGATCTGAAGTTTGTGCTAACTGAGGAGTGTCCTCAGGTGCCAGGCTCGAATGCGTCACGAAATGTTTGTGATGCATATGATCGATGGATCAAGGCCAATGATAAGGCCAAGGTCTACATTTTGGCAAGTATGTCTGACAGATTAGCCAAGAAGCATGAGGGCATGATGACCACTAAGGAAATCATGGATTCAGTGCAGGGTATGTTTGGACAACAGTCCACACAGGCCCGACACAATGCCCTAAAGTACATTTTCAACTCGAGGATGCCAGAGGGTACATCTGTTTGGGATCATGTCCTGGATATGATGGTACACTTTAATATCGCGGAGTCGAATGGTGCTTCCATCGATGAATCGAGCCAGGTCAGCTTCATTCTGGAAACTCTTCCAAATAGTTTCCTTCAGTTTAGAAGTAATGTTGTTATGAACAAGCTTACTTTTAATCTTACCTCCCTTCTGAATGAACTCCAGACCTTTCAATCTATGATGAAAATTCAGGGATCGAAAGGTGAGGAAAATGTTGCCAATAGGAGTTATCATAGAGGTTCGACCTCTGGATCAAAAACAGTGGCTTCAATTTCTTCTAACTTGAAAGGGAAGAAGAAGAATATGAAGAAGGTTGGTAAAGGGAAACGAGCTGACAAAGCTGCCGCCTAG

Protein sequence

MENKLNTILVVDDLKFVLTEECPQVPGSNASRNVCDAYDRWIKANDKAKVYILASMSDRLAKKHEGMMTTKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVWDHVLDMMVHFNIAESNGASIDESSQVSFILETLPNSFLQFRSNVVMNKLTFNLTSLLNELQTFQSMMKIQGSKGEENVANRSYHRGSTSGSKTVASISSNLKGKKKNMKKVGKGKRADKAAA

Homology

[Close]

BLAST of Tan0013608 vs. NCBI nr
Match: KAA0044955.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 291.2 bits (744), Expect = 7.8e-75
Identity = 151/231 (65.37%), Postives = 190/231 (82.25%), Query Frame = 0


Query: 2   ENKLNTILVVDDLKFVLTEECPQVPGSNASRNVCDAYDRWIKANDKAKVYILASMSDRLA 61
           +N +NT+L++DDL+FVL EECPQVP +NA+R V + Y+RW KAN+KA+ YILAS+S+ LA
Sbjct: 23  KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 82

Query: 62  KKHEGMMTTKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVWDHVLDMMVHFNIA 121
           KKHE M+T +EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SV +HVL+MMVHFN+A
Sbjct: 83  KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 142

Query: 122 ESNGASIDESSQVSFILETLPNSFLQFRSNVVMNKLTFNLTSLLNELQTFQSMMKIQGSK 181
           E NGA IDE+SQVSFILE+LP SFLQFRSN VMNK+ + LT+LLNELQTF+S+MKI+G K
Sbjct: 143 EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 202

Query: 182 GEENVA--NRSYHRGSTSGSKTVASISSNLKGKKKNMKKVGKGKRADKAAA 231
           GE NVA   R +HRGSTSG+K++ S S N K KK   KK G+G +A+ AAA
Sbjct: 203 GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKK---KKGGQGNKANLAAA 250

[Close]

BLAST of Tan0013608 vs. NCBI nr
Match: TYK14550.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 291.2 bits (744), Expect = 7.8e-75
Identity = 151/231 (65.37%), Postives = 190/231 (82.25%), Query Frame = 0


Query: 2   ENKLNTILVVDDLKFVLTEECPQVPGSNASRNVCDAYDRWIKANDKAKVYILASMSDRLA 61
           +N +NT+L++DDL+FVL EECPQVP +NA+R V + Y+RW KAN+KA+ YILAS+S+ LA
Sbjct: 23  KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 82

Query: 62  KKHEGMMTTKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVWDHVLDMMVHFNIA 121
           KKHE M+T +EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SV +HVL+MMVHFN+A
Sbjct: 83  KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 142

Query: 122 ESNGASIDESSQVSFILETLPNSFLQFRSNVVMNKLTFNLTSLLNELQTFQSMMKIQGSK 181
           E NGA IDE+SQVSFILE+LP SFLQFRSN VMNK+ + LT+LLNELQTF+S+MKI+G K
Sbjct: 143 EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 202

Query: 182 GEENVA--NRSYHRGSTSGSKTVASISSNLKGKKKNMKKVGKGKRADKAAA 231
           GE NVA   R +HRGSTSG+K++ S S N K KK   KK G+G +A+ AAA
Sbjct: 203 GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKK---KKGGQGNKANLAAA 250

[Close]

BLAST of Tan0013608 vs. NCBI nr
Match: KAA0054490.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 291.2 bits (744), Expect = 7.8e-75
Identity = 151/231 (65.37%), Postives = 190/231 (82.25%), Query Frame = 0


Query: 2   ENKLNTILVVDDLKFVLTEECPQVPGSNASRNVCDAYDRWIKANDKAKVYILASMSDRLA 61
           +N +NT+L++DDL+FVL EECPQVP +NA+R V + Y+RW KAN+KA+ YILAS+S+ LA
Sbjct: 23  KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 82

Query: 62  KKHEGMMTTKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVWDHVLDMMVHFNIA 121
           KKHE M+T +EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SV +HVL+MMVHFN+A
Sbjct: 83  KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 142

Query: 122 ESNGASIDESSQVSFILETLPNSFLQFRSNVVMNKLTFNLTSLLNELQTFQSMMKIQGSK 181
           E NGA IDE+SQVSFILE+LP SFLQFRSN VMNK+ + LT+LLNELQTF+S+MKI+G K
Sbjct: 143 EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 202

Query: 182 GEENVA--NRSYHRGSTSGSKTVASISSNLKGKKKNMKKVGKGKRADKAAA 231
           GE NVA   R +HRGSTSG+K++ S S N K KK   KK G+G +A+ AAA
Sbjct: 203 GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKK---KKGGQGNKANLAAA 250

[Close]

BLAST of Tan0013608 vs. NCBI nr
Match: KAA0051952.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 291.2 bits (744), Expect = 7.8e-75
Identity = 151/231 (65.37%), Postives = 190/231 (82.25%), Query Frame = 0


Query: 2   ENKLNTILVVDDLKFVLTEECPQVPGSNASRNVCDAYDRWIKANDKAKVYILASMSDRLA 61
           +N +NT+L++DDL+FVL EECPQVP +NA+R V + Y+RW KAN+KA+ YILAS+S+ LA
Sbjct: 23  KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 82

Query: 62  KKHEGMMTTKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVWDHVLDMMVHFNIA 121
           KKHE M+T +EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SV +HVL+MMVHFN+A
Sbjct: 83  KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 142

Query: 122 ESNGASIDESSQVSFILETLPNSFLQFRSNVVMNKLTFNLTSLLNELQTFQSMMKIQGSK 181
           E NGA IDE+SQVSFILE+LP SFLQFRSN VMNK+ + LT+LLNELQTF+S+MKI+G K
Sbjct: 143 EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 202

Query: 182 GEENVA--NRSYHRGSTSGSKTVASISSNLKGKKKNMKKVGKGKRADKAAA 231
           GE NVA   R +HRGSTSG+K++ S S N K KK   KK G+G +A+ AAA
Sbjct: 203 GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKK---KKGGQGNKANLAAA 250

[Close]

BLAST of Tan0013608 vs. NCBI nr
Match: KAA0035879.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051221.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0051893.1 gag/pol protein [Cucumis melo var. makuwa] >TYK00551.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 291.2 bits (744), Expect = 7.8e-75
Identity = 151/231 (65.37%), Postives = 190/231 (82.25%), Query Frame = 0


Query: 2   ENKLNTILVVDDLKFVLTEECPQVPGSNASRNVCDAYDRWIKANDKAKVYILASMSDRLA 61
           +N +NT+L++DDL+FVL EECPQVP +NA+R V + Y+RW KAN+KA+ YILAS+S+ LA
Sbjct: 23  KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 82

Query: 62  KKHEGMMTTKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVWDHVLDMMVHFNIA 121
           KKHE M+T +EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SV +HVL+MMVHFN+A
Sbjct: 83  KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 142

Query: 122 ESNGASIDESSQVSFILETLPNSFLQFRSNVVMNKLTFNLTSLLNELQTFQSMMKIQGSK 181
           E NGA IDE+SQVSFILE+LP SFLQFRSN VMNK+ + LT+LLNELQTF+S+MKI+G K
Sbjct: 143 EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 202

Query: 182 GEENVA--NRSYHRGSTSGSKTVASISSNLKGKKKNMKKVGKGKRADKAAA 231
           GE NVA   R +HRGSTSG+K++ S S N K KK   KK G+G +A+ AAA
Sbjct: 203 GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKK---KKGGQGNKANLAAA 250

[Close]

BLAST of Tan0013608 vs. ExPASy TrEMBL
Match: A0A5A7SMH8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G002560 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 3.8e-75
Identity = 151/231 (65.37%), Postives = 190/231 (82.25%), Query Frame = 0


Query: 2   ENKLNTILVVDDLKFVLTEECPQVPGSNASRNVCDAYDRWIKANDKAKVYILASMSDRLA 61
           +N +NT+L++DDL+FVL EECPQVP +NA+R V + Y+RW KAN+KA+ YILAS+S+ LA
Sbjct: 23  KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 82

Query: 62  KKHEGMMTTKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVWDHVLDMMVHFNIA 121
           KKHE M+T +EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SV +HVL+MMVHFN+A
Sbjct: 83  KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 142

Query: 122 ESNGASIDESSQVSFILETLPNSFLQFRSNVVMNKLTFNLTSLLNELQTFQSMMKIQGSK 181
           E NGA IDE+SQVSFILE+LP SFLQFRSN VMNK+ + LT+LLNELQTF+S+MKI+G K
Sbjct: 143 EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 202

Query: 182 GEENVA--NRSYHRGSTSGSKTVASISSNLKGKKKNMKKVGKGKRADKAAA 231
           GE NVA   R +HRGSTSG+K++ S S N K KK   KK G+G +A+ AAA
Sbjct: 203 GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKK---KKGGQGNKANLAAA 250

[Close]

BLAST of Tan0013608 vs. ExPASy TrEMBL
Match: A0A5D3CPJ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G00040 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 3.8e-75
Identity = 151/231 (65.37%), Postives = 190/231 (82.25%), Query Frame = 0


Query: 2   ENKLNTILVVDDLKFVLTEECPQVPGSNASRNVCDAYDRWIKANDKAKVYILASMSDRLA 61
           +N +NT+L++DDL+FVL EECPQVP +NA+R V + Y+RW KAN+KA+ YILAS+S+ LA
Sbjct: 23  KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 82

Query: 62  KKHEGMMTTKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVWDHVLDMMVHFNIA 121
           KKHE M+T +EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SV +HVL+MMVHFN+A
Sbjct: 83  KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 142

Query: 122 ESNGASIDESSQVSFILETLPNSFLQFRSNVVMNKLTFNLTSLLNELQTFQSMMKIQGSK 181
           E NGA IDE+SQVSFILE+LP SFLQFRSN VMNK+ + LT+LLNELQTF+S+MKI+G K
Sbjct: 143 EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 202

Query: 182 GEENVA--NRSYHRGSTSGSKTVASISSNLKGKKKNMKKVGKGKRADKAAA 231
           GE NVA   R +HRGSTSG+K++ S S N K KK   KK G+G +A+ AAA
Sbjct: 203 GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKK---KKGGQGNKANLAAA 250

[Close]

BLAST of Tan0013608 vs. ExPASy TrEMBL
Match: A0A5A7TU93 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002590 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 3.8e-75
Identity = 151/231 (65.37%), Postives = 190/231 (82.25%), Query Frame = 0


Query: 2   ENKLNTILVVDDLKFVLTEECPQVPGSNASRNVCDAYDRWIKANDKAKVYILASMSDRLA 61
           +N +NT+L++DDL+FVL EECPQVP +NA+R V + Y+RW KAN+KA+ YILAS+S+ LA
Sbjct: 23  KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 82

Query: 62  KKHEGMMTTKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVWDHVLDMMVHFNIA 121
           KKHE M+T +EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SV +HVL+MMVHFN+A
Sbjct: 83  KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 142

Query: 122 ESNGASIDESSQVSFILETLPNSFLQFRSNVVMNKLTFNLTSLLNELQTFQSMMKIQGSK 181
           E NGA IDE+SQVSFILE+LP SFLQFRSN VMNK+ + LT+LLNELQTF+S+MKI+G K
Sbjct: 143 EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 202

Query: 182 GEENVA--NRSYHRGSTSGSKTVASISSNLKGKKKNMKKVGKGKRADKAAA 231
           GE NVA   R +HRGSTSG+K++ S S N K KK   KK G+G +A+ AAA
Sbjct: 203 GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKK---KKGGQGNKANLAAA 250

[Close]

BLAST of Tan0013608 vs. ExPASy TrEMBL
Match: A0A5A7TWB9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G00310 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 3.8e-75
Identity = 151/231 (65.37%), Postives = 190/231 (82.25%), Query Frame = 0


Query: 2   ENKLNTILVVDDLKFVLTEECPQVPGSNASRNVCDAYDRWIKANDKAKVYILASMSDRLA 61
           +N +NT+L++DDL+FVL EECPQVP +NA+R V + Y+RW KAN+KA+ YILAS+S+ LA
Sbjct: 23  KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 82

Query: 62  KKHEGMMTTKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVWDHVLDMMVHFNIA 121
           KKHE M+T +EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SV +HVL+MMVHFN+A
Sbjct: 83  KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 142

Query: 122 ESNGASIDESSQVSFILETLPNSFLQFRSNVVMNKLTFNLTSLLNELQTFQSMMKIQGSK 181
           E NGA IDE+SQVSFILE+LP SFLQFRSN VMNK+ + LT+LLNELQTF+S+MKI+G K
Sbjct: 143 EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 202

Query: 182 GEENVA--NRSYHRGSTSGSKTVASISSNLKGKKKNMKKVGKGKRADKAAA 231
           GE NVA   R +HRGSTSG+K++ S S N K KK   KK G+G +A+ AAA
Sbjct: 203 GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKK---KKGGQGNKANLAAA 250

[Close]

BLAST of Tan0013608 vs. ExPASy TrEMBL
Match: A0A5D3CSZ6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G00320 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 3.8e-75
Identity = 151/231 (65.37%), Postives = 190/231 (82.25%), Query Frame = 0


Query: 2   ENKLNTILVVDDLKFVLTEECPQVPGSNASRNVCDAYDRWIKANDKAKVYILASMSDRLA 61
           +N +NT+L++DDL+FVL EECPQVP +NA+R V + Y+RW KAN+KA+ YILAS+S+ LA
Sbjct: 23  KNTINTVLIIDDLRFVLVEECPQVPAANATRTVREPYERWAKANEKARAYILASLSEVLA 82

Query: 62  KKHEGMMTTKEIMDSVQGMFGQQSTQARHNALKYIFNSRMPEGTSVWDHVLDMMVHFNIA 121
           KKHE M+T +EIMDS+Q MFGQ S Q +H+ALKYI+N+RM EG SV +HVL+MMVHFN+A
Sbjct: 83  KKHESMLTAREIMDSLQEMFGQASYQIKHDALKYIYNARMNEGASVREHVLNMMVHFNVA 142

Query: 122 ESNGASIDESSQVSFILETLPNSFLQFRSNVVMNKLTFNLTSLLNELQTFQSMMKIQGSK 181
           E NGA IDE+SQVSFILE+LP SFLQFRSN VMNK+ + LT+LLNELQTF+S+MKI+G K
Sbjct: 143 EMNGAVIDEASQVSFILESLPESFLQFRSNAVMNKIAYTLTTLLNELQTFESLMKIKGQK 202

Query: 182 GEENVA--NRSYHRGSTSGSKTVASISSNLKGKKKNMKKVGKGKRADKAAA 231
           GE NVA   R +HRGSTSG+K++ S S N K KK   KK G+G +A+ AAA
Sbjct: 203 GEANVATSTRKFHRGSTSGTKSMPSSSGNKKWKK---KKGGQGNKANLAAA 250

The following BLAST results are available for this feature:

BLAST of Tan0013608 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0013608 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044955.1	7.8e-75	65.37	gag/pol protein [Cucumis melo var. makuwa]	[more]
TYK14550.1	7.8e-75	65.37	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0054490.1	7.8e-75	65.37	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0051952.1	7.8e-75	65.37	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0035879.1	7.8e-75	65.37	gag/pol protein [Cucumis melo var. makuwa] >KAA0044276.1 gag/pol protein [Cucumi...	[more]

BLAST of Tan0013608 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SMH8	3.8e-75	65.37	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G0025...	[more]
A0A5D3CPJ6	3.8e-75	65.37	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G0004...	[more]
A0A5A7TU93	3.8e-75	65.37	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G00259...	[more]
A0A5A7TWB9	3.8e-75	65.37	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold133G0031...	[more]
A0A5D3CSZ6	3.8e-75	65.37	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G0032...	[more]

BLAST of Tan0013608 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 41..170 e-value: 2.3E-17 score: 63.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..210
None	No IPR available	PANTHER	PTHR35317	OS04G0629600 PROTEIN	coord: 29..226
None	No IPR available	PANTHER	PTHR35317:SF8	POLYPROTEIN-LIKE PROTEIN	coord: 29..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013608.1	Tan0013608.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding