Tan0013575 (gene) Snake gourd v1

Overview


Name	Tan0013575
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	zinc finger protein 6-like
Location	LG06: 5837611 .. 5838135 (-)
RNA-Seq Expression	Tan0013575
Synteny	Tan0013575

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCAATCAAAACCCCTCCTCCATTCTAAAGCTCTTCGGGTTCCCGCTAGTCGAACACGACGACCTTCCGCCGGAGACTACTGACGGCGGCGGCGCCGACACCAACTCCGACGAAGACAGGAAATTCCGGTGCCAATTCTGCCGCCGTGTTTTCGCCAACTCGCAGGCCCTCGGCGGCCACCAGAATGCCCACAAGAGAGAGCGCCAAAGGGCCAAACGCGCCCTTTATTTCCACGCCTCCGACCACCGCTTCGCCGCCGCACTCCGACCGCCGCCACTTTACTCCAGCGTTTTTCCGGGCAACATTGGCAGCGGTGGTTCTAGATTTCTGCCTCGGTGCGGTAACGGTTACTTTACGGCGGCGCACGGCGGCGTATCGGCGGCCTCAGGGCGGTGGATGTTTGGGAATCCGGGAGAAGGGAAAATAGAAATTTCAGGGTGTAAATTGGGAGGTGAAAAGGGATCAACGGATCATGTGGGTGTCATTGATCTTCATCTTAAACTTTCTCCTTCTGGTTCATGA

mRNA sequence

ATGTCCAATCAAAACCCCTCCTCCATTCTAAAGCTCTTCGGGTTCCCGCTAGTCGAACACGACGACCTTCCGCCGGAGACTACTGACGGCGGCGGCGCCGACACCAACTCCGACGAAGACAGGAAATTCCGGTGCCAATTCTGCCGCCGTGTTTTCGCCAACTCGCAGGCCCTCGGCGGCCACCAGAATGCCCACAAGAGAGAGCGCCAAAGGGCCAAACGCGCCCTTTATTTCCACGCCTCCGACCACCGCTTCGCCGCCGCACTCCGACCGCCGCCACTTTACTCCAGCGTTTTTCCGGGCAACATTGGCAGCGGTGGTTCTAGATTTCTGCCTCGGTGCGGTAACGGTTACTTTACGGCGGCGCACGGCGGCGTATCGGCGGCCTCAGGGCGGTGGATGTTTGGGAATCCGGGAGAAGGGAAAATAGAAATTTCAGGGTGTAAATTGGGAGGTGAAAAGGGATCAACGGATCATGTGGGTGTCATTGATCTTCATCTTAAACTTTCTCCTTCTGGTTCATGA

Coding sequence (CDS)

ATGTCCAATCAAAACCCCTCCTCCATTCTAAAGCTCTTCGGGTTCCCGCTAGTCGAACACGACGACCTTCCGCCGGAGACTACTGACGGCGGCGGCGCCGACACCAACTCCGACGAAGACAGGAAATTCCGGTGCCAATTCTGCCGCCGTGTTTTCGCCAACTCGCAGGCCCTCGGCGGCCACCAGAATGCCCACAAGAGAGAGCGCCAAAGGGCCAAACGCGCCCTTTATTTCCACGCCTCCGACCACCGCTTCGCCGCCGCACTCCGACCGCCGCCACTTTACTCCAGCGTTTTTCCGGGCAACATTGGCAGCGGTGGTTCTAGATTTCTGCCTCGGTGCGGTAACGGTTACTTTACGGCGGCGCACGGCGGCGTATCGGCGGCCTCAGGGCGGTGGATGTTTGGGAATCCGGGAGAAGGGAAAATAGAAATTTCAGGGTGTAAATTGGGAGGTGAAAAGGGATCAACGGATCATGTGGGTGTCATTGATCTTCATCTTAAACTTTCTCCTTCTGGTTCATGA

Protein sequence

MSNQNPSSILKLFGFPLVEHDDLPPETTDGGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYSSVFPGNIGSGGSRFLPRCGNGYFTAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSGS

Homology

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BLAST of Tan0013575 vs. ExPASy Swiss-Prot
Match: Q39265 (Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.3e-12
Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 7  SSILKLFGFPLVEHDDLPPETTDGGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHK 66
          +S LKLFG  L+E   +  ++++      +  E RK+ CQ+C R FANSQALGGHQNAHK
Sbjct: 5  TSSLKLFGINLLETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHK 64

Query: 67 RERQRAKRA 76
          +ERQ  KRA
Sbjct: 65 KERQLLKRA 73

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BLAST of Tan0013575 vs. ExPASy Swiss-Prot
Match: Q9C9H1 (Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.3e-10
Identity = 61/185 (32.97%), Postives = 83/185 (44.86%), Query Frame = 0


Query: 30  GGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL----------YFH 89
           GGG       +RK+ CQ+C R F NSQALGGHQNAHK+ERQ+ KRA           + +
Sbjct: 63  GGG---GGGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSN 122

Query: 90  ASD------HRFAAALRPPP--LYSSVFPGNIGSGGSRFLPRCGNGYFTAAH-------- 149
           A        +   +A  PPP  L SS  P  +G G   +LPR        +H        
Sbjct: 123 AGSASQFLRNPIVSAFAPPPHLLSSSAVPQPMG-GPWMYLPRVSPSQLHVSHGCVIQDGS 182

Query: 150 GGVSAASGRWMFGNPGEG---------KIEISGCK-----LGGEKGSTDHVGV-IDLHLK 174
           GG  A    + +G    G          ++  G +        E G+T   G+ +DLHL 
Sbjct: 183 GGAGAGGFSYEYGARDSGFGVVGAQMRHVQAHGPRPSVNGFSREVGTTFDDGLGLDLHLS 242

[Close]

BLAST of Tan0013575 vs. ExPASy Swiss-Prot
Match: Q39264 (Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.5e-09
Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 0


Query: 2  SNQNPSSILKLFGFPLVEHDDLPPETT-DGGGADTNSDE---DRKFRCQFCRRVFANSQA 61
          S  +    +KLFGF L+     P  TT +   + TN+      ++  CQ+C + FANSQA
Sbjct: 15 SGSSSDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQA 74

Query: 62 LGGHQNAHKRERQRAKR 75
          LGGHQNAHK+ER + KR
Sbjct: 75 LGGHQNAHKKERLKKKR 91

[Close]

BLAST of Tan0013575 vs. ExPASy Swiss-Prot
Match: Q9FG05 (Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.0e-08
Identity = 36/91 (39.56%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 10  LKLFGFPL-VEHDDLPPETTDGGGADTNS----DEDRKFRCQFCRRVFANSQALGGHQNA 69
           ++LFGF     H++   E+ D    +  S    +++++F+C +C R F  SQALGGHQNA
Sbjct: 19  IRLFGFEFGASHEE--SESKDNYNENNESIKDDNKEKRFKCHYCFRNFPTSQALGGHQNA 78

Query: 70  HKRERQRAKR-------ALYFHASDHRFAAA 89
           HKRERQ+ KR       A +FH   +  AA+
Sbjct: 79  HKRERQQTKRFNLHSNAAAFFHRQQNHIAAS 107

[Close]

BLAST of Tan0013575 vs. ExPASy Swiss-Prot
Match: Q84WI0 (Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.0e-08
Identity = 38/104 (36.54%), Postives = 54/104 (51.92%), Query Frame = 0


Query: 19  EHDDLPPETTDGGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL-- 78
           E ++   +T D    + +   +R+F C +C R F  SQALGGHQNAHKRERQ AKR +  
Sbjct: 67  EEEEEEDQTGDNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAKRGVSS 126

Query: 79  YFHASDHRFAAALRPPPLYSSVFPGNIGSGGSRFLPRCGNGYFT 121
           YF+  D+   +    P   +         GG    P+  +GY+T
Sbjct: 127 YFYHPDNNPYSYRHYPSWTNGPLTAARSYGGFSSGPK-PSGYYT 169

[Close]

BLAST of Tan0013575 vs. NCBI nr
Match: KAG7025578.1 (Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 275.0 bits (702), Expect = 4.4e-70
Identity = 145/183 (79.23%), Postives = 147/183 (80.33%), Query Frame = 0


Query: 1   MSNQNPSSILKLFGFPLVEHDDLPPETTDGGGA-DTNSDEDRKFRCQFCRRVFANSQALG 60
           MSNQNPSSILKLFGFPLVEHDDLPP T DGGG  DTNSD DRKFRCQFC RVFANSQALG
Sbjct: 1   MSNQNPSSILKLFGFPLVEHDDLPPATPDGGGGDDTNSDYDRKFRCQFCHRVFANSQALG 60

Query: 61  GHQNAHKRERQRAKRALYFHASDHRFAA-------ALRPPPLYSSVFPGNIGSG--GSRF 120
           GHQNAHKRERQRAKRALYFHASDH  AA       ALRPPP YSSVFP NIG G  G RF
Sbjct: 61  GHQNAHKRERQRAKRALYFHASDHHLAAAAAAAAVALRPPPFYSSVFPANIGGGHRGYRF 120

Query: 121 LPRCGNGYFTAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLS 174
           LPR  NGYFTAA+GGVSA SGRWMFGN GE          GGEKGSTD VGV+DLHLKLS
Sbjct: 121 LPRSENGYFTAAYGGVSAGSGRWMFGNSGE----------GGEKGSTDDVGVVDLHLKLS 173

[Close]

BLAST of Tan0013575 vs. NCBI nr
Match: XP_023004876.1 (zinc finger protein GIS3-like [Cucurbita maxima])

HSP 1 Score: 274.6 bits (701), Expect = 5.7e-70
Identity = 141/178 (79.21%), Postives = 146/178 (82.02%), Query Frame = 0


Query: 1   MSNQNPSSILKLFGFPLVEHDDLPPETTDGGGA-DTNSDEDRKFRCQFCRRVFANSQALG 60
           MSNQNPS+ILKLFGFPLVEHDDLPP T DGGG  DTNSD DRKFRCQFC RVFANSQALG
Sbjct: 1   MSNQNPSTILKLFGFPLVEHDDLPPATPDGGGGDDTNSDYDRKFRCQFCHRVFANSQALG 60

Query: 61  GHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYSSVFPGNIGSGGS----RFLPRCG 120
           GHQNAHKRERQRAKRALYFHASDH  AAALRPPP YSSVFP +IG GG     RFLPR  
Sbjct: 61  GHQNAHKRERQRAKRALYFHASDHHLAAALRPPPFYSSVFPAHIGGGGGHRGYRFLPRSD 120

Query: 121 NGYFTAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSG 174
           +GYFTAA+GGVSA SGRWMFGN GE          GGEKGSTD V V+DLHLKLSPSG
Sbjct: 121 HGYFTAAYGGVSAGSGRWMFGNSGE----------GGEKGSTDDVDVVDLHLKLSPSG 168

[Close]

BLAST of Tan0013575 vs. NCBI nr
Match: XP_023514545.1 (zinc finger protein 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 273.1 bits (697), Expect = 1.7e-69
Identity = 141/178 (79.21%), Postives = 144/178 (80.90%), Query Frame = 0


Query: 1   MSNQNPSSILKLFGFPLVEHDDLPPETTDGGGA-DTNSDEDRKFRCQFCRRVFANSQALG 60
           MSNQNPSSILKLFG PLVEHDDLPP T DGGG  DTNSD DRKFRCQFC RVFANSQALG
Sbjct: 1   MSNQNPSSILKLFGVPLVEHDDLPPATPDGGGGDDTNSDYDRKFRCQFCHRVFANSQALG 60

Query: 61  GHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYSSVFPGNIGSGGS----RFLPRCG 120
           GHQNAHKRERQRAKRALYFHASDH  AAALRP P YSSVFP NIG GG     RF+PR  
Sbjct: 61  GHQNAHKRERQRAKRALYFHASDHHLAAALRPLPFYSSVFPANIGGGGGHRGYRFVPRSD 120

Query: 121 NGYFTAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSG 174
           NGYFTAA+GGVS  SGRWMFGN GE          GGEKGSTD VGV+DLHLKLSPSG
Sbjct: 121 NGYFTAAYGGVSVGSGRWMFGNSGE----------GGEKGSTDDVGVVDLHLKLSPSG 168

[Close]

BLAST of Tan0013575 vs. NCBI nr
Match: XP_008451655.1 (PREDICTED: zinc finger protein 6-like [Cucumis melo])

HSP 1 Score: 261.5 bits (667), Expect = 5.0e-66
Identity = 143/184 (77.72%), Postives = 148/184 (80.43%), Query Frame = 0


Query: 1   MSNQNPSSILKLFGFPLVEHDDLPPETTD--GGGADT--NSDEDRKFRCQFCRRVFANSQ 60
           MSN NPSSILKLFGFPLVEHDD PPET D  GGGADT  NSD+DRKFRCQFCRRVFANSQ
Sbjct: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDGVGGGADTTINSDDDRKFRCQFCRRVFANSQ 60

Query: 61  ALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYSSVFPGNI----GSGGSRFLP 120
           ALGGHQNAHKRERQRAKRALYFH      AAALRPP LYSSVFP N     G GGSR LP
Sbjct: 61  ALGGHQNAHKRERQRAKRALYFH------AAALRPPSLYSSVFPSNFGGDGGGGGSRILP 120

Query: 121 RCGNGYF--TAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLS 175
           R GNGYF  TAA+GGVSA+SGRWMFGN  EGK+E SGCKLGGEKG       +DLHLKLS
Sbjct: 121 RNGNGYFAETAAYGGVSASSGRWMFGNSSEGKMENSGCKLGGEKGL-----CVDLHLKLS 173

[Close]

BLAST of Tan0013575 vs. NCBI nr
Match: KAA0046676.1 (zinc finger protein 6-like [Cucumis melo var. makuwa] >TYK18211.1 zinc finger protein 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 260.4 bits (664), Expect = 1.1e-65
Identity = 143/187 (76.47%), Postives = 148/187 (79.14%), Query Frame = 0


Query: 1   MSNQNPSSILKLFGFPLVEHDDLPPETTD--GGGADT--NSDEDRKFRCQFCRRVFANSQ 60
           MSN NPSSILKLFGFPLVEHDD PPET D  GGGADT  NSD+DRKFRCQFCRRVFANSQ
Sbjct: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDGVGGGADTTINSDDDRKFRCQFCRRVFANSQ 60

Query: 61  ALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYSSVFPGNI-------GSGGSR 120
           ALGGHQNAHKRERQRAKRALYFH      AAALRPP LYSSVFP N        G GGSR
Sbjct: 61  ALGGHQNAHKRERQRAKRALYFH------AAALRPPSLYSSVFPSNFGGDGGGGGGGGSR 120

Query: 121 FLPRCGNGYF--TAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHL 175
            LPR GNGYF  TAA+GGVSA+SGRWMFGN  EGK+E SGCKLGGEKG       +DLHL
Sbjct: 121 ILPRNGNGYFAETAAYGGVSASSGRWMFGNSSEGKMENSGCKLGGEKGL-----CVDLHL 176

[Close]

BLAST of Tan0013575 vs. ExPASy TrEMBL
Match: A0A6J1KTC7 (zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111498055 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.8e-70
Identity = 141/178 (79.21%), Postives = 146/178 (82.02%), Query Frame = 0


Query: 1   MSNQNPSSILKLFGFPLVEHDDLPPETTDGGGA-DTNSDEDRKFRCQFCRRVFANSQALG 60
           MSNQNPS+ILKLFGFPLVEHDDLPP T DGGG  DTNSD DRKFRCQFC RVFANSQALG
Sbjct: 1   MSNQNPSTILKLFGFPLVEHDDLPPATPDGGGGDDTNSDYDRKFRCQFCHRVFANSQALG 60

Query: 61  GHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYSSVFPGNIGSGGS----RFLPRCG 120
           GHQNAHKRERQRAKRALYFHASDH  AAALRPPP YSSVFP +IG GG     RFLPR  
Sbjct: 61  GHQNAHKRERQRAKRALYFHASDHHLAAALRPPPFYSSVFPAHIGGGGGHRGYRFLPRSD 120

Query: 121 NGYFTAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPSG 174
           +GYFTAA+GGVSA SGRWMFGN GE          GGEKGSTD V V+DLHLKLSPSG
Sbjct: 121 HGYFTAAYGGVSAGSGRWMFGNSGE----------GGEKGSTDDVDVVDLHLKLSPSG 168

[Close]

BLAST of Tan0013575 vs. ExPASy TrEMBL
Match: A0A1S3BSU1 (zinc finger protein 6-like OS=Cucumis melo OX=3656 GN=LOC103492887 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.4e-66
Identity = 143/184 (77.72%), Postives = 148/184 (80.43%), Query Frame = 0


Query: 1   MSNQNPSSILKLFGFPLVEHDDLPPETTD--GGGADT--NSDEDRKFRCQFCRRVFANSQ 60
           MSN NPSSILKLFGFPLVEHDD PPET D  GGGADT  NSD+DRKFRCQFCRRVFANSQ
Sbjct: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDGVGGGADTTINSDDDRKFRCQFCRRVFANSQ 60

Query: 61  ALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYSSVFPGNI----GSGGSRFLP 120
           ALGGHQNAHKRERQRAKRALYFH      AAALRPP LYSSVFP N     G GGSR LP
Sbjct: 61  ALGGHQNAHKRERQRAKRALYFH------AAALRPPSLYSSVFPSNFGGDGGGGGSRILP 120

Query: 121 RCGNGYF--TAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLS 175
           R GNGYF  TAA+GGVSA+SGRWMFGN  EGK+E SGCKLGGEKG       +DLHLKLS
Sbjct: 121 RNGNGYFAETAAYGGVSASSGRWMFGNSSEGKMENSGCKLGGEKGL-----CVDLHLKLS 173

[Close]

BLAST of Tan0013575 vs. ExPASy TrEMBL
Match: A0A5D3D1T3 (Zinc finger protein 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001500 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 5.4e-66
Identity = 143/187 (76.47%), Postives = 148/187 (79.14%), Query Frame = 0


Query: 1   MSNQNPSSILKLFGFPLVEHDDLPPETTD--GGGADT--NSDEDRKFRCQFCRRVFANSQ 60
           MSN NPSSILKLFGFPLVEHDD PPET D  GGGADT  NSD+DRKFRCQFCRRVFANSQ
Sbjct: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDGVGGGADTTINSDDDRKFRCQFCRRVFANSQ 60

Query: 61  ALGGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYSSVFPGNI-------GSGGSR 120
           ALGGHQNAHKRERQRAKRALYFH      AAALRPP LYSSVFP N        G GGSR
Sbjct: 61  ALGGHQNAHKRERQRAKRALYFH------AAALRPPSLYSSVFPSNFGGDGGGGGGGGSR 120

Query: 121 FLPRCGNGYF--TAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHL 175
            LPR GNGYF  TAA+GGVSA+SGRWMFGN  EGK+E SGCKLGGEKG       +DLHL
Sbjct: 121 ILPRNGNGYFAETAAYGGVSASSGRWMFGNSSEGKMENSGCKLGGEKGL-----CVDLHL 176

[Close]

BLAST of Tan0013575 vs. ExPASy TrEMBL
Match: A0A0A0K5R1 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G406990 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.4e-61
Identity = 138/182 (75.82%), Postives = 144/182 (79.12%), Query Frame = 0


Query: 1   MSNQNPSSILKLFGFPLVEHDDLPPETTDG-GGADTN-SDEDRKFRCQFCRRVFANSQAL 60
           MSN NPSSILKLFGFPLVEHDD PPET DG GGADT  S++DRKFRCQFCRRVFANSQAL
Sbjct: 1   MSNHNPSSILKLFGFPLVEHDDNPPETPDGAGGADTTISEDDRKFRCQFCRRVFANSQAL 60

Query: 61  GGHQNAHKRERQRAKRALYFHASDHRFAAALRPPPLYSSVFPGNIG--SGGSRFLPR--C 120
           GGHQNAHKRERQRAKRALYFH      AAALRPP LYSSVFP NIG   G SR L R   
Sbjct: 61  GGHQNAHKRERQRAKRALYFH------AAALRPPSLYSSVFPSNIGGDGGASRILHRNNN 120

Query: 121 GNGYF--TAAHGGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLSPS 175
            NGYF  TAA+GGVSA+SGRWMFGN  EG +E SGCKLGGEKG       +DLHLKLSPS
Sbjct: 121 SNGYFTETAAYGGVSASSGRWMFGNSSEGNMENSGCKLGGEKGL-----CVDLHLKLSPS 171

[Close]

BLAST of Tan0013575 vs. ExPASy TrEMBL
Match: A0A6J1JX90 (zinc finger protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488312 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 6.4e-59
Identity = 121/167 (72.46%), Postives = 134/167 (80.24%), Query Frame = 0


Query: 5   NPSSILKLFGFPLVEHDDLPPETTDGGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNA 64
           N  SILKLFGFPLVEH+ + PET +G G D NSD+DRKFRCQFCRRVFANSQALGGHQNA
Sbjct: 12  NKMSILKLFGFPLVEHNGVQPETPEGSGGDINSDDDRKFRCQFCRRVFANSQALGGHQNA 71

Query: 65  HKRERQRAKRALYFHASDHRFAAALRPPPLYSSVFPGNIGSGG-SRFLPRCGNGYFTAAH 124
           HKRERQRAKRALYFH        ALRPPPLY++V+P NIGS G SR LPR  N YFTAA+
Sbjct: 72  HKRERQRAKRALYFH--------ALRPPPLYTNVYPANIGSSGDSRILPRSRNEYFTAAY 131

Query: 125 GGVSAASGRWMFGNPGEGKIEISGCKLGGEKGSTDHVGVIDLHLKLS 171
           GGVSA+SGRWMF     GK+E SGCKL GEKG  +HVG +DLHLKL+
Sbjct: 132 GGVSASSGRWMF-----GKMESSGCKLDGEKGLPNHVGAVDLHLKLT 165

[Close]

BLAST of Tan0013575 vs. TAIR 10
Match: AT1G67030.1 (zinc finger protein 6 )

HSP 1 Score: 72.8 bits (177), Expect = 3.1e-13
Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 0


Query: 7  SSILKLFGFPLVEHDDLPPETTDGGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHK 66
          +S LKLFG  L+E   +  ++++      +  E RK+ CQ+C R FANSQALGGHQNAHK
Sbjct: 5  TSSLKLFGINLLETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHK 64

Query: 67 RERQRAKRA 76
          +ERQ  KRA
Sbjct: 65 KERQLLKRA 73

[Close]

BLAST of Tan0013575 vs. TAIR 10
Match: AT1G68360.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 65.9 bits (159), Expect = 3.8e-11
Identity = 61/185 (32.97%), Postives = 83/185 (44.86%), Query Frame = 0


Query: 30  GGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL----------YFH 89
           GGG       +RK+ CQ+C R F NSQALGGHQNAHK+ERQ+ KRA           + +
Sbjct: 63  GGG---GGGGERKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSN 122

Query: 90  ASD------HRFAAALRPPP--LYSSVFPGNIGSGGSRFLPRCGNGYFTAAH-------- 149
           A        +   +A  PPP  L SS  P  +G G   +LPR        +H        
Sbjct: 123 AGSASQFLRNPIVSAFAPPPHLLSSSAVPQPMG-GPWMYLPRVSPSQLHVSHGCVIQDGS 182

Query: 150 GGVSAASGRWMFGNPGEG---------KIEISGCK-----LGGEKGSTDHVGV-IDLHLK 174
           GG  A    + +G    G          ++  G +        E G+T   G+ +DLHL 
Sbjct: 183 GGAGAGGFSYEYGARDSGFGVVGAQMRHVQAHGPRPSVNGFSREVGTTFDDGLGLDLHLS 242

[Close]

BLAST of Tan0013575 vs. TAIR 10
Match: AT1G10480.1 (zinc finger protein 5 )

HSP 1 Score: 62.8 bits (151), Expect = 3.2e-10
Identity = 34/77 (44.16%), Postives = 46/77 (59.74%), Query Frame = 0


Query: 2  SNQNPSSILKLFGFPLVEHDDLPPETT-DGGGADTNSDE---DRKFRCQFCRRVFANSQA 61
          S  +    +KLFGF L+     P  TT +   + TN+      ++  CQ+C + FANSQA
Sbjct: 15 SGSSSDKTIKLFGFELISGSRTPEITTAESVSSSTNTTSLTVMKRHECQYCGKEFANSQA 74

Query: 62 LGGHQNAHKRERQRAKR 75
          LGGHQNAHK+ER + KR
Sbjct: 75 LGGHQNAHKKERLKKKR 91

[Close]

BLAST of Tan0013575 vs. TAIR 10
Match: AT5G06650.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 61.6 bits (148), Expect = 7.1e-10
Identity = 36/91 (39.56%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 10  LKLFGFPL-VEHDDLPPETTDGGGADTNS----DEDRKFRCQFCRRVFANSQALGGHQNA 69
           ++LFGF     H++   E+ D    +  S    +++++F+C +C R F  SQALGGHQNA
Sbjct: 19  IRLFGFEFGASHEE--SESKDNYNENNESIKDDNKEKRFKCHYCFRNFPTSQALGGHQNA 78

Query: 70  HKRERQRAKR-------ALYFHASDHRFAAA 89
           HKRERQ+ KR       A +FH   +  AA+
Sbjct: 79  HKRERQQTKRFNLHSNAAAFFHRQQNHIAAS 107

[Close]

BLAST of Tan0013575 vs. TAIR 10
Match: AT3G58070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 3.5e-09
Identity = 38/104 (36.54%), Postives = 54/104 (51.92%), Query Frame = 0


Query: 19  EHDDLPPETTDGGGADTNSDEDRKFRCQFCRRVFANSQALGGHQNAHKRERQRAKRAL-- 78
           E ++   +T D    + +   +R+F C +C R F  SQALGGHQNAHKRERQ AKR +  
Sbjct: 67  EEEEEEDQTGDNSTDNNSISHNRRFECHYCFRNFPTSQALGGHQNAHKRERQLAKRGVSS 126

Query: 79  YFHASDHRFAAALRPPPLYSSVFPGNIGSGGSRFLPRCGNGYFT 121
           YF+  D+   +    P   +         GG    P+  +GY+T
Sbjct: 127 YFYHPDNNPYSYRHYPSWTNGPLTAARSYGGFSSGPK-PSGYYT 169

The following BLAST results are available for this feature:

BLAST of Tan0013575 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39265	4.3e-12	52.17	Zinc finger protein 6 OS=Arabidopsis thaliana OX=3702 GN=ZFP6 PE=2 SV=1	[more]
Q9C9H1	5.3e-10	32.97	Zinc finger protein GIS3 OS=Arabidopsis thaliana OX=3702 GN=GIS3 PE=1 SV=1	[more]
Q39264	4.5e-09	44.16	Zinc finger protein 5 OS=Arabidopsis thaliana OX=3702 GN=ZFP5 PE=1 SV=1	[more]
Q9FG05	1.0e-08	39.56	Zinc finger protein GIS2 OS=Arabidopsis thaliana OX=3702 GN=GIS2 PE=2 SV=1	[more]
Q84WI0	5.0e-08	36.54	Zinc finger protein GIS OS=Arabidopsis thaliana OX=3702 GN=GIS PE=1 SV=1	[more]

BLAST of Tan0013575 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7025578.1	4.4e-70	79.23	Zinc finger protein 6, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023004876.1	5.7e-70	79.21	zinc finger protein GIS3-like [Cucurbita maxima]	[more]
XP_023514545.1	1.7e-69	79.21	zinc finger protein 6-like [Cucurbita pepo subsp. pepo]	[more]
XP_008451655.1	5.0e-66	77.72	PREDICTED: zinc finger protein 6-like [Cucumis melo]	[more]
KAA0046676.1	1.1e-65	76.47	zinc finger protein 6-like [Cucumis melo var. makuwa] >TYK18211.1 zinc finger pr...	[more]

BLAST of Tan0013575 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KTC7	2.8e-70	79.21	zinc finger protein GIS3-like OS=Cucurbita maxima OX=3661 GN=LOC111498055 PE=4 S...	[more]
A0A1S3BSU1	2.4e-66	77.72	zinc finger protein 6-like OS=Cucumis melo OX=3656 GN=LOC103492887 PE=4 SV=1	[more]
A0A5D3D1T3	5.4e-66	76.47	Zinc finger protein 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A0A0K5R1	1.4e-61	75.82	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G406990 P...	[more]
A0A6J1JX90	6.4e-59	72.46	zinc finger protein 6-like OS=Cucurbita maxima OX=3661 GN=LOC111488312 PE=4 SV=1	[more]

BLAST of Tan0013575 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67030.1	3.1e-13	52.17	zinc finger protein 6	[more]
AT1G68360.1	3.8e-11	32.97	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT1G10480.1	3.2e-10	44.16	zinc finger protein 5	[more]
AT5G06650.1	7.1e-10	39.56	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G58070.1	3.5e-09	36.54	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 32..86 e-value: 6.1E-6 score: 27.9
None	No IPR available	PANTHER	PTHR46353:SF11	ZINC FINGER PROTEIN 6-LIKE	coord: 1..174
IPR044299	Zinc finger protein GIS3/ZFP5/ZFP6	PANTHER	PTHR46353	ZINC FINGER PROTEIN 5	coord: 1..174
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 45..65
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 43..70 score: 11.447647
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 40..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013575.1	Tan0013575.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0010090	trichome morphogenesis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0000976	transcription cis-regulatory region binding