Tan0013555 (gene) Snake gourd v1

Overview
NameTan0013555
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionLOB domain-containing protein 2
LocationLG05: 7378777 .. 7379469 (-)
RNA-Seq ExpressionTan0013555
SyntenyTan0013555
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAGGAACAACAACAACAACGGTGTTTTGCAGCCCGCGCCCGCCTGTGCGGCCTGCAAGCACCAAAGGAAGAAATGCCACGAAACGTGCCCGTTGGCGCCGTACTTTCCCGCCGACCGAAACCGAGAATTCCAAGCCGTTCACAAGGTTTTTGGAGTGAGCAATGTGACCAAAATGGTGAAGAACGTGAGAGAAGAGGATAGGAGAAAGGCTGTGGATTCTCTAGTTTGGGAAGCTGTTTGTAGGCAAAACGACCCCGTTTTGGGACCTTATGCAGAATACAAAAGGGTTTTGGAAGAGTTGAAAGTGTGTAAATTGGCTCAAAACCAAAACCAAAGCCAAAGCCAAAGCCCAAACCCATTTTTAGGGCAAGTGGGTTTGGGTTATAAACCAATAATACCTTGTTTAGGTGGGTGGAATAATGGTAATTCCATTAATAATGGGAATGGGATCATGGGTATTATTAATGGAGGAGTTAATAGCAGCAATTTGTTTAATTATCTTAATGATAATCTAAGTGCGATTATTGATTCAAGTCCTTATAGTAATTCTTCGACTTATAATTTGCAAAGCCCTGAGAAATTGATGATGAAATTGCAGCAAGATAAAGAAATTAGTTCAAGCGTCGTTGTGCCGTTTCAACAGCAGCAACATCAGCAGCAGCATCCTAATTTCCACCATTGTTTTTAG

mRNA sequence

ATGCAAAGGAACAACAACAACAACGGTGTTTTGCAGCCCGCGCCCGCCTGTGCGGCCTGCAAGCACCAAAGGAAGAAATGCCACGAAACGTGCCCGTTGGCGCCGTACTTTCCCGCCGACCGAAACCGAGAATTCCAAGCCGTTCACAAGGTTTTTGGAGTGAGCAATGTGACCAAAATGGTGAAGAACGTGAGAGAAGAGGATAGGAGAAAGGCTGTGGATTCTCTAGTTTGGGAAGCTGTTTGTAGGCAAAACGACCCCGTTTTGGGACCTTATGCAGAATACAAAAGGGTTTTGGAAGAGTTGAAAGTGTGTAAATTGGCTCAAAACCAAAACCAAAGCCAAAGCCAAAGCCCAAACCCATTTTTAGGGCAAGTGGGTTTGGGTTATAAACCAATAATACCTTGTTTAGGTGGGTGGAATAATGGTAATTCCATTAATAATGGGAATGGGATCATGGGTATTATTAATGGAGGAGTTAATAGCAGCAATTTGTTTAATTATCTTAATGATAATCTAAGTGCGATTATTGATTCAAGTCCTTATAGTAATTCTTCGACTTATAATTTGCAAAGCCCTGAGAAATTGATGATGAAATTGCAGCAAGATAAAGAAATTAGTTCAAGCGTCGTTGTGCCGTTTCAACAGCAGCAACATCAGCAGCAGCATCCTAATTTCCACCATTGTTTTTAG

Coding sequence (CDS)

ATGCAAAGGAACAACAACAACAACGGTGTTTTGCAGCCCGCGCCCGCCTGTGCGGCCTGCAAGCACCAAAGGAAGAAATGCCACGAAACGTGCCCGTTGGCGCCGTACTTTCCCGCCGACCGAAACCGAGAATTCCAAGCCGTTCACAAGGTTTTTGGAGTGAGCAATGTGACCAAAATGGTGAAGAACGTGAGAGAAGAGGATAGGAGAAAGGCTGTGGATTCTCTAGTTTGGGAAGCTGTTTGTAGGCAAAACGACCCCGTTTTGGGACCTTATGCAGAATACAAAAGGGTTTTGGAAGAGTTGAAAGTGTGTAAATTGGCTCAAAACCAAAACCAAAGCCAAAGCCAAAGCCCAAACCCATTTTTAGGGCAAGTGGGTTTGGGTTATAAACCAATAATACCTTGTTTAGGTGGGTGGAATAATGGTAATTCCATTAATAATGGGAATGGGATCATGGGTATTATTAATGGAGGAGTTAATAGCAGCAATTTGTTTAATTATCTTAATGATAATCTAAGTGCGATTATTGATTCAAGTCCTTATAGTAATTCTTCGACTTATAATTTGCAAAGCCCTGAGAAATTGATGATGAAATTGCAGCAAGATAAAGAAATTAGTTCAAGCGTCGTTGTGCCGTTTCAACAGCAGCAACATCAGCAGCAGCATCCTAATTTCCACCATTGTTTTTAG

Protein sequence

MQRNNNNNGVLQPAPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDRRKAVDSLVWEAVCRQNDPVLGPYAEYKRVLEELKVCKLAQNQNQSQSQSPNPFLGQVGLGYKPIIPCLGGWNNGNSINNGNGIMGIINGGVNSSNLFNYLNDNLSAIIDSSPYSNSSTYNLQSPEKLMMKLQQDKEISSSVVVPFQQQQHQQQHPNFHHCF
Homology
BLAST of Tan0013555 vs. ExPASy Swiss-Prot
Match: Q9LNB9 (LOB domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=LBD2 PE=2 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 4.5e-33
Identity = 89/181 (49.17%), Postives = 109/181 (60.22%), Query Frame = 0

Query: 1   MQRNNNNNGVL-------QPAPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFG 60
           MQRN+NN  +            ACA+CKHQRKKC+  C L+PYFPA + +EFQAVHKVFG
Sbjct: 2   MQRNSNNTSITSNISNNSSSHQACASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVFG 61

Query: 61  VSNVTKMVKNVREEDRRKAVDSLVWEAVCRQNDPVLGPYAEYKRVLEELKVCK-LAQNQ- 120
           VSNV KMV+ VREEDR K  DSL WEA+ RQ DPVLG Y EY+R+ EELK+ K L  NQ 
Sbjct: 62  VSNVQKMVRTVREEDRTKLSDSLTWEALWRQKDPVLGSYGEYRRICEELKLYKSLVHNQP 121

Query: 121 ----NQSQSQSPNPFLGQVGLGYKPIIPCLGGWNNGNSINNGNGI---MGIINGGVNSSN 166
               + +Q    N    + GL            + G S+NN NG+     I+NGG  S N
Sbjct: 122 LIGWDNNQRVFNNNSNNKNGLAMTN-----SSGSGGFSVNN-NGVGVNREIVNGGYASRN 176

BLAST of Tan0013555 vs. ExPASy Swiss-Prot
Match: Q9LRW1 (LOB domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=LBD22 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.4e-18
Identity = 44/100 (44.00%), Postives = 70/100 (70.00%), Query Frame = 0

Query: 4   NNNNNGVLQPAPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVKN 63
           ++NNN   Q   ACAACK+QR+KC   C LAPYFP DR+R+F   HK+FGVSN+TK++K+
Sbjct: 27  SSNNNSTNQ---ACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKS 86

Query: 64  VREEDRRKAVDSLVWEAVCRQNDPVLGPYAEYKRVLEELK 104
           +   ++  A+ ++++++  R NDPV G Y   K++  +++
Sbjct: 87  LTPPEKDAAMHTIMFQSDARANDPVDGCYGIIKKLQYQIE 123

BLAST of Tan0013555 vs. ExPASy Swiss-Prot
Match: Q9SSM9 (LOB domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=LBD7 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 3.1e-18
Identity = 49/119 (41.18%), Postives = 68/119 (57.14%), Query Frame = 0

Query: 16  ACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDRRKAVDS 75
           ACAACKHQRKKC + C LA YFP D   +F   HK+FGVSN+TKM+K + E  R  A+++
Sbjct: 13  ACAACKHQRKKCKKNCILARYFPQDGTNKFLNAHKLFGVSNITKMLKRIEESQRDIAMEN 72

Query: 76  LVWEAVCRQNDPVLGPY--------------AEYKRVLEELKVCK-LAQNQNQSQSQSP 120
           L++ A  R  DPV G Y               E     +++ +C+ LAQ Q++ +   P
Sbjct: 73  LIYHANARALDPVGGVYRTICDLKCKIEFVQTELNLTRQQIDMCRSLAQEQHRQRQNLP 131

BLAST of Tan0013555 vs. ExPASy Swiss-Prot
Match: Q9SCS4 (LOB domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=LBD28 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 5.0e-16
Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = 0

Query: 17  CAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDRRKAVDSL 76
           CAACKH R+KC E C  APYFP+ +   ++AVHKVFG S+V  ++ ++    R  A+D+L
Sbjct: 13  CAACKHLRRKCTEDCVFAPYFPSTKLDNYEAVHKVFGASHVATLINSLHPCQREFAMDTL 72

Query: 77  VWEAVCRQNDPVLGPYAEYKRVLEELK 104
            WEA  + NDPV G       +L ++K
Sbjct: 73  AWEAQVQANDPVNGCLGIIYNLLSQIK 99

BLAST of Tan0013555 vs. ExPASy Swiss-Prot
Match: Q9STS6 (LOB domain-containing protein 27 OS=Arabidopsis thaliana OX=3702 GN=LBD27 PE=1 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.5e-15
Identity = 43/128 (33.59%), Postives = 75/128 (58.59%), Query Frame = 0

Query: 16  ACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDRRKAVDS 75
           ACAACK+QR++C   CPLAPYFPA++ + FQ VH++FGV ++ K+++ + E  + +A+ S
Sbjct: 36  ACAACKYQRRRCAADCPLAPYFPAEQPKLFQNVHRLFGVRSIVKILEKLDETQKPEAMKS 95

Query: 76  LVWEAVCRQNDPVLG--------------PYAEYKRVLEELKVCKL--AQNQNQSQSQSP 128
           +++++  R   PV G                 E K V  +L++ +      QNQ+Q+ + 
Sbjct: 96  IIFQSYVRDRSPVHGCLGVTQQLQYMIWFAEEELKAVNSQLQLYRSQPQNGQNQNQNHNH 155

BLAST of Tan0013555 vs. NCBI nr
Match: XP_038900978.1 (LOB domain-containing protein 2 [Benincasa hispida])

HSP 1 Score: 360.5 bits (924), Expect = 1.1e-95
Identity = 195/243 (80.25%), Postives = 207/243 (85.19%), Query Frame = 0

Query: 1   MQRNNNNNGVLQPAPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKM 60
           MQR  +NNGVLQ  PACAACKHQRKKCHETCPLAPYFPA+RNREFQAVHKVFGVSNVTKM
Sbjct: 1   MQR--HNNGVLQVTPACAACKHQRKKCHETCPLAPYFPANRNREFQAVHKVFGVSNVTKM 60

Query: 61  VKNVREEDRRKAVDSLVWEAVCRQNDPVLGPYAEYKRVLEELKVCKLAQNQNQSQSQSPN 120
           VKNVREED+RKAVDSLVWEAVCRQNDPVLGPY EYKRVLEELKVCKL   QNQS      
Sbjct: 61  VKNVREEDKRKAVDSLVWEAVCRQNDPVLGPYGEYKRVLEELKVCKLL-TQNQSIMNG-- 120

Query: 121 PFLGQVGLGYKPIIPCLGGWNNGNS------------INNGNGIMGIINGGVNSSNLFNY 180
              GQV LGYKPI+PCLGGWNN N+            INNGNGIMGIINGGVNS++LF+Y
Sbjct: 121 ---GQVELGYKPIMPCLGGWNNNNNNKNINNNASENLINNGNGIMGIINGGVNSNHLFSY 180

Query: 181 LNDN-LSAIIDSSPYSNSSTYNLQSPEKLMMKLQQDKEISSSVVVPFQQQQHQQQHPNFH 231
           L+DN +SAIIDSSPYSNSSTYNLQSPEKL M+LQQDKEISSS+VVP QQQQ QQQHP FH
Sbjct: 181 LHDNYVSAIIDSSPYSNSSTYNLQSPEKL-MRLQQDKEISSSIVVPLQQQQ-QQQHPTFH 233

BLAST of Tan0013555 vs. NCBI nr
Match: XP_022140622.1 (LOB domain-containing protein 2 [Momordica charantia])

HSP 1 Score: 357.1 bits (915), Expect = 1.2e-94
Identity = 189/233 (81.12%), Postives = 203/233 (87.12%), Query Frame = 0

Query: 1   MQRNNNNNGVLQPAPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKM 60
           MQR  +NN  LQPA ACAACKHQRKKCH+TCPLAPYFPADRNREFQAVHKVFGVSNVTKM
Sbjct: 1   MQR--HNNAALQPAAACAACKHQRKKCHDTCPLAPYFPADRNREFQAVHKVFGVSNVTKM 60

Query: 61  VKNVREEDRRKAVDSLVWEAVCRQNDPVLGPYAEYKRVLEELKVCKLAQNQNQSQSQSPN 120
           VKNVREEDRRKAVDSL+WEAVCRQNDPVLGPY EY+RVLEELKVCKL    +Q+QSQ  N
Sbjct: 61  VKNVREEDRRKAVDSLIWEAVCRQNDPVLGPYGEYRRVLEELKVCKLL---SQNQSQGQN 120

Query: 121 PFLGQVGLGYKPIIPCLGGWNNG--NSINNGNGIMGI-INGGVNSSNLFNYLNDNLSAII 180
           PF      GYKPI+PC GGWNNG  ++ NNGNGIMGI INGGVNSSNLFNYL+DNLSAII
Sbjct: 121 PF-----AGYKPIMPCFGGWNNGTNSTNNNGNGIMGININGGVNSSNLFNYLHDNLSAII 180

Query: 181 DSSPYSNSSTYNLQSPEKLMMKLQQDKEISSSVVVPFQQQQHQQQHPNFHHCF 231
           DSS YSNSSTYNLQSPEKL ++LQQDKEI+SSVVVP QQQ  QQQHPNFH  +
Sbjct: 181 DSSHYSNSSTYNLQSPEKL-IRLQQDKEITSSVVVPLQQQVQQQQHPNFHQLY 222

BLAST of Tan0013555 vs. NCBI nr
Match: XP_016901865.1 (PREDICTED: LOB domain-containing protein 2 [Cucumis melo] >TYK09538.1 LOB domain-containing protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 356.7 bits (914), Expect = 1.5e-94
Identity = 193/248 (77.82%), Postives = 206/248 (83.06%), Query Frame = 0

Query: 1   MQRNNNNNGVLQPAPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKM 60
           MQR  +NNG+LQ  PACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKM
Sbjct: 1   MQR--HNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKM 60

Query: 61  VKNVREEDRRKAVDSLVWEAVCRQNDPVLGPYAEYKRVLEELKVCKLAQNQNQSQSQSPN 120
           VKNVREED+RKAVDSL+WEAVCRQNDPVLGPY EYKRVLEE+KVCKL   QNQS      
Sbjct: 61  VKNVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLL-TQNQSIMNG-- 120

Query: 121 PFLGQVGLGYKPIIPCLGGW-----------------NNGNSINNGNGIMGIINGGVNSS 180
              GQVGLGYKPI+PCLG W                 NNGN INNGNGIMGIINGGVNS+
Sbjct: 121 ---GQVGLGYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSN 180

Query: 181 NLFNYLNDN-LSAIIDSSPYSNSSTYNLQSPEKLMMKLQQDKEISSSVVVPFQQQQHQQQ 231
           +LFNYL+DN +SAIIDSSPYSNSSTYNLQSPEKL M+LQQDKEI+SS+V P QQQQ QQQ
Sbjct: 181 HLFNYLHDNYVSAIIDSSPYSNSSTYNLQSPEKL-MRLQQDKEITSSMVGPLQQQQ-QQQ 238

BLAST of Tan0013555 vs. NCBI nr
Match: XP_023533791.1 (LOB domain-containing protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 348.2 bits (892), Expect = 5.4e-92
Identity = 186/239 (77.82%), Postives = 200/239 (83.68%), Query Frame = 0

Query: 1   MQRNNNNNGVLQPAPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKM 60
           MQR  +N G LQPAPACAACKHQRKKCHETCPLAPYFPAD+NREFQAVHKVFGVSNVTKM
Sbjct: 1   MQR--HNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKM 60

Query: 61  VKNVREEDRRKAVDSLVWEAVCRQNDPVLGPYAEYKRVLEELKVCKLAQNQNQSQSQSPN 120
           VKNVREEDRRKAV+SLVWEAVCRQNDPVLGP+ EYKRVLEELKVCK+ QN    QSQS N
Sbjct: 61  VKNVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQN----QSQSSN 120

Query: 121 PFLGQVGLGYKPIIPCLGGWNNGNSINNGNGIMGIINGGVNSSNLFNYLNDNLSAIIDSS 180
           PF+GQVGL      PC G    G+  NNGNGIMG+INGGVN ++LFNYL+DNLSAIIDSS
Sbjct: 121 PFVGQVGL------PCFG----GSISNNGNGIMGLINGGVNGTHLFNYLHDNLSAIIDSS 180

Query: 181 PYSNSSTYNLQSPEKLMMKLQQDKEISSSVVVPF------QQQQHQ---QQHPNFHHCF 231
           PY+NSSTYNLQSPEKLM   Q  KEISS++VVPF      QQQQHQ   QQHPNFHHCF
Sbjct: 181 PYTNSSTYNLQSPEKLMRLQQDHKEISSTIVVPFQPPPPQQQQQHQQQHQQHPNFHHCF 223

BLAST of Tan0013555 vs. NCBI nr
Match: XP_022947169.1 (LOB domain-containing protein 2 [Cucurbita moschata])

HSP 1 Score: 347.8 bits (891), Expect = 7.1e-92
Identity = 186/237 (78.48%), Postives = 199/237 (83.97%), Query Frame = 0

Query: 1   MQRNNNNNGVLQPAPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKM 60
           MQR  +N G LQPAPACAACKHQRKKCHETCPLAPYFPAD+NREFQAVHKVFGVSNVTKM
Sbjct: 1   MQR--HNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKM 60

Query: 61  VKNVREEDRRKAVDSLVWEAVCRQNDPVLGPYAEYKRVLEELKVCKLAQNQNQSQSQSPN 120
           VKNVREEDRRKAV+SLVWEAVCRQNDPVLGP+ EYKRVLEELKVCK+ QN    QSQS N
Sbjct: 61  VKNVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQN----QSQSSN 120

Query: 121 PFLGQVGLGYKPIIPCLGGWNNGNSINNGNGIMGIINGGVNSSNLFNYLNDNLSAIIDSS 180
           PF+GQVGL      PC G    G   NNGNGI+G+INGGVN S+LFNYL+DNLSAIIDSS
Sbjct: 121 PFVGQVGL------PCFG----GTISNNGNGIVGLINGGVNGSHLFNYLHDNLSAIIDSS 180

Query: 181 PYSNSSTYNLQSPEKLMMKLQQDKEISSSVVVPF------QQQQHQ-QQHPNFHHCF 231
           PY+NSSTYNLQSPEKLM   Q  KEISS++VVPF      QQQQHQ QQHPNFHHCF
Sbjct: 181 PYTNSSTYNLQSPEKLMRLHQDHKEISSTIVVPFQPPPPPQQQQHQHQQHPNFHHCF 221

BLAST of Tan0013555 vs. ExPASy TrEMBL
Match: A0A6J1CHJ9 (LOB domain-containing protein 2 OS=Momordica charantia OX=3673 GN=LOC111011230 PE=3 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 5.6e-95
Identity = 189/233 (81.12%), Postives = 203/233 (87.12%), Query Frame = 0

Query: 1   MQRNNNNNGVLQPAPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKM 60
           MQR  +NN  LQPA ACAACKHQRKKCH+TCPLAPYFPADRNREFQAVHKVFGVSNVTKM
Sbjct: 1   MQR--HNNAALQPAAACAACKHQRKKCHDTCPLAPYFPADRNREFQAVHKVFGVSNVTKM 60

Query: 61  VKNVREEDRRKAVDSLVWEAVCRQNDPVLGPYAEYKRVLEELKVCKLAQNQNQSQSQSPN 120
           VKNVREEDRRKAVDSL+WEAVCRQNDPVLGPY EY+RVLEELKVCKL    +Q+QSQ  N
Sbjct: 61  VKNVREEDRRKAVDSLIWEAVCRQNDPVLGPYGEYRRVLEELKVCKLL---SQNQSQGQN 120

Query: 121 PFLGQVGLGYKPIIPCLGGWNNG--NSINNGNGIMGI-INGGVNSSNLFNYLNDNLSAII 180
           PF      GYKPI+PC GGWNNG  ++ NNGNGIMGI INGGVNSSNLFNYL+DNLSAII
Sbjct: 121 PF-----AGYKPIMPCFGGWNNGTNSTNNNGNGIMGININGGVNSSNLFNYLHDNLSAII 180

Query: 181 DSSPYSNSSTYNLQSPEKLMMKLQQDKEISSSVVVPFQQQQHQQQHPNFHHCF 231
           DSS YSNSSTYNLQSPEKL ++LQQDKEI+SSVVVP QQQ  QQQHPNFH  +
Sbjct: 181 DSSHYSNSSTYNLQSPEKL-IRLQQDKEITSSVVVPLQQQVQQQQHPNFHQLY 222

BLAST of Tan0013555 vs. ExPASy TrEMBL
Match: A0A5D3CE97 (LOB domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold757G00180 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 7.4e-95
Identity = 193/248 (77.82%), Postives = 206/248 (83.06%), Query Frame = 0

Query: 1   MQRNNNNNGVLQPAPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKM 60
           MQR  +NNG+LQ  PACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKM
Sbjct: 1   MQR--HNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKM 60

Query: 61  VKNVREEDRRKAVDSLVWEAVCRQNDPVLGPYAEYKRVLEELKVCKLAQNQNQSQSQSPN 120
           VKNVREED+RKAVDSL+WEAVCRQNDPVLGPY EYKRVLEE+KVCKL   QNQS      
Sbjct: 61  VKNVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLL-TQNQSIMNG-- 120

Query: 121 PFLGQVGLGYKPIIPCLGGW-----------------NNGNSINNGNGIMGIINGGVNSS 180
              GQVGLGYKPI+PCLG W                 NNGN INNGNGIMGIINGGVNS+
Sbjct: 121 ---GQVGLGYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSN 180

Query: 181 NLFNYLNDN-LSAIIDSSPYSNSSTYNLQSPEKLMMKLQQDKEISSSVVVPFQQQQHQQQ 231
           +LFNYL+DN +SAIIDSSPYSNSSTYNLQSPEKL M+LQQDKEI+SS+V P QQQQ QQQ
Sbjct: 181 HLFNYLHDNYVSAIIDSSPYSNSSTYNLQSPEKL-MRLQQDKEITSSMVGPLQQQQ-QQQ 238

BLAST of Tan0013555 vs. ExPASy TrEMBL
Match: A0A1S4E1K1 (LOB domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103495999 PE=3 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 7.4e-95
Identity = 193/248 (77.82%), Postives = 206/248 (83.06%), Query Frame = 0

Query: 1   MQRNNNNNGVLQPAPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKM 60
           MQR  +NNG+LQ  PACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKM
Sbjct: 1   MQR--HNNGLLQATPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKM 60

Query: 61  VKNVREEDRRKAVDSLVWEAVCRQNDPVLGPYAEYKRVLEELKVCKLAQNQNQSQSQSPN 120
           VKNVREED+RKAVDSL+WEAVCRQNDPVLGPY EYKRVLEE+KVCKL   QNQS      
Sbjct: 61  VKNVREEDKRKAVDSLIWEAVCRQNDPVLGPYGEYKRVLEEVKVCKLL-TQNQSIMNG-- 120

Query: 121 PFLGQVGLGYKPIIPCLGGW-----------------NNGNSINNGNGIMGIINGGVNSS 180
              GQVGLGYKPI+PCLG W                 NNGN INNGNGIMGIINGGVNS+
Sbjct: 121 ---GQVGLGYKPIMPCLGPWNNNNNNNSNNNTNNNNNNNGNLINNGNGIMGIINGGVNSN 180

Query: 181 NLFNYLNDN-LSAIIDSSPYSNSSTYNLQSPEKLMMKLQQDKEISSSVVVPFQQQQHQQQ 231
           +LFNYL+DN +SAIIDSSPYSNSSTYNLQSPEKL M+LQQDKEI+SS+V P QQQQ QQQ
Sbjct: 181 HLFNYLHDNYVSAIIDSSPYSNSSTYNLQSPEKL-MRLQQDKEITSSMVGPLQQQQ-QQQ 238

BLAST of Tan0013555 vs. ExPASy TrEMBL
Match: A0A6J1G604 (LOB domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111451117 PE=3 SV=1)

HSP 1 Score: 347.8 bits (891), Expect = 3.4e-92
Identity = 186/237 (78.48%), Postives = 199/237 (83.97%), Query Frame = 0

Query: 1   MQRNNNNNGVLQPAPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKM 60
           MQR  +N G LQPAPACAACKHQRKKCHETCPLAPYFPAD+NREFQAVHKVFGVSNVTKM
Sbjct: 1   MQR--HNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKM 60

Query: 61  VKNVREEDRRKAVDSLVWEAVCRQNDPVLGPYAEYKRVLEELKVCKLAQNQNQSQSQSPN 120
           VKNVREEDRRKAV+SLVWEAVCRQNDPVLGP+ EYKRVLEELKVCK+ QN    QSQS N
Sbjct: 61  VKNVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQN----QSQSSN 120

Query: 121 PFLGQVGLGYKPIIPCLGGWNNGNSINNGNGIMGIINGGVNSSNLFNYLNDNLSAIIDSS 180
           PF+GQVGL      PC G    G   NNGNGI+G+INGGVN S+LFNYL+DNLSAIIDSS
Sbjct: 121 PFVGQVGL------PCFG----GTISNNGNGIVGLINGGVNGSHLFNYLHDNLSAIIDSS 180

Query: 181 PYSNSSTYNLQSPEKLMMKLQQDKEISSSVVVPF------QQQQHQ-QQHPNFHHCF 231
           PY+NSSTYNLQSPEKLM   Q  KEISS++VVPF      QQQQHQ QQHPNFHHCF
Sbjct: 181 PYTNSSTYNLQSPEKLMRLHQDHKEISSTIVVPFQPPPPPQQQQHQHQQHPNFHHCF 221

BLAST of Tan0013555 vs. ExPASy TrEMBL
Match: A0A6J1I7L7 (LOB domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111469870 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 7.6e-92
Identity = 184/235 (78.30%), Postives = 197/235 (83.83%), Query Frame = 0

Query: 1   MQRNNNNNGVLQPAPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKM 60
           MQR  +N G LQPAPACAACKHQRKKCHETCPLAPYFPAD+NREFQAVHKVFGVSNVTKM
Sbjct: 1   MQR--HNLGALQPAPACAACKHQRKKCHETCPLAPYFPADQNREFQAVHKVFGVSNVTKM 60

Query: 61  VKNVREEDRRKAVDSLVWEAVCRQNDPVLGPYAEYKRVLEELKVCKLAQNQNQSQSQSPN 120
           VKNVREEDRRKAV+SLVWEAVCRQNDPVLGP+ EYKRVLEELKVCK+ QN    QSQS N
Sbjct: 61  VKNVREEDRRKAVESLVWEAVCRQNDPVLGPFGEYKRVLEELKVCKMGQN----QSQSSN 120

Query: 121 PFLGQVGLGYKPIIPCLGGWNNGNSINNGNGIMGIINGGVNSSNLFNYLNDNLSAIIDSS 180
           PF+GQVGL      PC G    G+  NNGNGIMG+INGGVN S+LFNYL+DNLSAIIDSS
Sbjct: 121 PFVGQVGL------PCFG----GSISNNGNGIMGLINGGVNGSHLFNYLHDNLSAIIDSS 180

Query: 181 PYSNSSTYNLQSPEKLMMKLQQDKEISSSVVVPF-----QQQQHQQQHPNFHHCF 231
           PY+NSSTYNLQSPEKLM   Q  KEISS++VVPF     QQQQ  QQH NFHHCF
Sbjct: 181 PYTNSSTYNLQSPEKLMRLHQDHKEISSTIVVPFQPPPPQQQQQHQQHSNFHHCF 219

BLAST of Tan0013555 vs. TAIR 10
Match: AT1G06280.1 (LOB domain-containing protein 2 )

HSP 1 Score: 142.9 bits (359), Expect = 3.2e-34
Identity = 89/181 (49.17%), Postives = 109/181 (60.22%), Query Frame = 0

Query: 1   MQRNNNNNGVL-------QPAPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFG 60
           MQRN+NN  +            ACA+CKHQRKKC+  C L+PYFPA + +EFQAVHKVFG
Sbjct: 2   MQRNSNNTSITSNISNNSSSHQACASCKHQRKKCNNECILSPYFPARKTKEFQAVHKVFG 61

Query: 61  VSNVTKMVKNVREEDRRKAVDSLVWEAVCRQNDPVLGPYAEYKRVLEELKVCK-LAQNQ- 120
           VSNV KMV+ VREEDR K  DSL WEA+ RQ DPVLG Y EY+R+ EELK+ K L  NQ 
Sbjct: 62  VSNVQKMVRTVREEDRTKLSDSLTWEALWRQKDPVLGSYGEYRRICEELKLYKSLVHNQP 121

Query: 121 ----NQSQSQSPNPFLGQVGLGYKPIIPCLGGWNNGNSINNGNGI---MGIINGGVNSSN 166
               + +Q    N    + GL            + G S+NN NG+     I+NGG  S N
Sbjct: 122 LIGWDNNQRVFNNNSNNKNGLAMTN-----SSGSGGFSVNN-NGVGVNREIVNGGYASRN 176

BLAST of Tan0013555 vs. TAIR 10
Match: AT3G13850.1 (LOB domain-containing protein 22 )

HSP 1 Score: 94.7 bits (234), Expect = 1.0e-19
Identity = 44/100 (44.00%), Postives = 70/100 (70.00%), Query Frame = 0

Query: 4   NNNNNGVLQPAPACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVKN 63
           ++NNN   Q   ACAACK+QR+KC   C LAPYFP DR+R+F   HK+FGVSN+TK++K+
Sbjct: 27  SSNNNSTNQ---ACAACKYQRRKCAPDCLLAPYFPHDRHRQFLNAHKLFGVSNITKIIKS 86

Query: 64  VREEDRRKAVDSLVWEAVCRQNDPVLGPYAEYKRVLEELK 104
           +   ++  A+ ++++++  R NDPV G Y   K++  +++
Sbjct: 87  LTPPEKDAAMHTIMFQSDARANDPVDGCYGIIKKLQYQIE 123

BLAST of Tan0013555 vs. TAIR 10
Match: AT1G72980.1 (LOB domain-containing protein 7 )

HSP 1 Score: 93.6 bits (231), Expect = 2.2e-19
Identity = 49/119 (41.18%), Postives = 68/119 (57.14%), Query Frame = 0

Query: 16  ACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDRRKAVDS 75
           ACAACKHQRKKC + C LA YFP D   +F   HK+FGVSN+TKM+K + E  R  A+++
Sbjct: 13  ACAACKHQRKKCKKNCILARYFPQDGTNKFLNAHKLFGVSNITKMLKRIEESQRDIAMEN 72

Query: 76  LVWEAVCRQNDPVLGPY--------------AEYKRVLEELKVCK-LAQNQNQSQSQSP 120
           L++ A  R  DPV G Y               E     +++ +C+ LAQ Q++ +   P
Sbjct: 73  LIYHANARALDPVGGVYRTICDLKCKIEFVQTELNLTRQQIDMCRSLAQEQHRQRQNLP 131

BLAST of Tan0013555 vs. TAIR 10
Match: AT3G50510.1 (LOB domain-containing protein 28 )

HSP 1 Score: 86.3 bits (212), Expect = 3.6e-17
Identity = 39/87 (44.83%), Postives = 55/87 (63.22%), Query Frame = 0

Query: 17  CAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDRRKAVDSL 76
           CAACKH R+KC E C  APYFP+ +   ++AVHKVFG S+V  ++ ++    R  A+D+L
Sbjct: 13  CAACKHLRRKCTEDCVFAPYFPSTKLDNYEAVHKVFGASHVATLINSLHPCQREFAMDTL 72

Query: 77  VWEAVCRQNDPVLGPYAEYKRVLEELK 104
            WEA  + NDPV G       +L ++K
Sbjct: 73  AWEAQVQANDPVNGCLGIIYNLLSQIK 99

BLAST of Tan0013555 vs. TAIR 10
Match: AT3G47870.1 (LOB domain-containing protein 27 )

HSP 1 Score: 84.7 bits (208), Expect = 1.0e-16
Identity = 43/128 (33.59%), Postives = 75/128 (58.59%), Query Frame = 0

Query: 16  ACAACKHQRKKCHETCPLAPYFPADRNREFQAVHKVFGVSNVTKMVKNVREEDRRKAVDS 75
           ACAACK+QR++C   CPLAPYFPA++ + FQ VH++FGV ++ K+++ + E  + +A+ S
Sbjct: 36  ACAACKYQRRRCAADCPLAPYFPAEQPKLFQNVHRLFGVRSIVKILEKLDETQKPEAMKS 95

Query: 76  LVWEAVCRQNDPVLG--------------PYAEYKRVLEELKVCKL--AQNQNQSQSQSP 128
           +++++  R   PV G                 E K V  +L++ +      QNQ+Q+ + 
Sbjct: 96  IIFQSYVRDRSPVHGCLGVTQQLQYMIWFAEEELKAVNSQLQLYRSQPQNGQNQNQNHNH 155

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LNB94.5e-3349.17LOB domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=LBD2 PE=2 SV=... [more]
Q9LRW11.4e-1844.00LOB domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=LBD22 PE=2 S... [more]
Q9SSM93.1e-1841.18LOB domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=LBD7 PE=2 SV=... [more]
Q9SCS45.0e-1644.83LOB domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=LBD28 PE=2 S... [more]
Q9STS61.5e-1533.59LOB domain-containing protein 27 OS=Arabidopsis thaliana OX=3702 GN=LBD27 PE=1 S... [more]
Match NameE-valueIdentityDescription
XP_038900978.11.1e-9580.25LOB domain-containing protein 2 [Benincasa hispida][more]
XP_022140622.11.2e-9481.12LOB domain-containing protein 2 [Momordica charantia][more]
XP_016901865.11.5e-9477.82PREDICTED: LOB domain-containing protein 2 [Cucumis melo] >TYK09538.1 LOB domain... [more]
XP_023533791.15.4e-9277.82LOB domain-containing protein 2 [Cucurbita pepo subsp. pepo][more]
XP_022947169.17.1e-9278.48LOB domain-containing protein 2 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
A0A6J1CHJ95.6e-9581.12LOB domain-containing protein 2 OS=Momordica charantia OX=3673 GN=LOC111011230 P... [more]
A0A5D3CE977.4e-9577.82LOB domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A1S4E1K17.4e-9577.82LOB domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103495999 PE=3 SV=... [more]
A0A6J1G6043.4e-9278.48LOB domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111451117 PE... [more]
A0A6J1I7L77.6e-9278.30LOB domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111469870 PE=3... [more]
Match NameE-valueIdentityDescription
AT1G06280.13.2e-3449.17LOB domain-containing protein 2 [more]
AT3G13850.11.0e-1944.00LOB domain-containing protein 22 [more]
AT1G72980.12.2e-1941.18LOB domain-containing protein 7 [more]
AT3G50510.13.6e-1744.83LOB domain-containing protein 28 [more]
AT3G47870.11.0e-1633.59LOB domain-containing protein 27 [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 16..106
e-value: 3.6E-32
score: 110.9
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 15..116
score: 22.337538
NoneNo IPR availablePANTHERPTHR31301:SF135LOB DOMAIN-CONTAINING PROTEIN 2coord: 13..222
NoneNo IPR availablePANTHERPTHR31301LOB DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 13..222

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0013555.1Tan0013555.1mRNA