Tan0013536 (gene) Snake gourd v1

Overview


Name	Tan0013536
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	LOB domain-containing protein
Location	LG11: 6780495 .. 6781802 (-)
RNA-Seq Expression	Tan0013536
Synteny	Tan0013536

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCCCGCCGCCGCCGCCGACGACGGTGGTTCTCAGCCCGTGCGCCGCTTGTAAGATCCTCCGCCGGAGATGCGTCAATAAGTGTGTTTTGGCGCCTTATTTTCCTCCCACTGAGCCACTCAAGTTCGCCGCCGTGCATCGAATATTTGGAGCCGGCAACGTCATCAAGTTCTTGCAGGTATAAACTAACGTCGTGGGTACAAGCAAGGTTTAAGATGTAAGGAGATGCCGAGGTTTAAATTTAAACAAAAAAATTCAAAAATATATTTAAATTAAAAAAATAAACATTCTACATTTTTTAAATGAGTTAAAAATACTTGTTATGATATTATATTCACATTTTGTTACTATTTATTTAATATTTCATCAATTTTGTGCGATATAATGGAAATGTTGATTCATCCCTTATATCGATGTCGAATCTATGGACATGTAGAAATATCGATGTAAATATCGACGAAAATTTAATACGATGGGTACAAATGCATACAATTAGACCAATATTGTAAAAATGCATTTTTACCCACTAATTTTAATAATTTGAATTCATTTTTATCTTAAACTTTTAACTTTATTCAAGTGCACCTTCAACTTTATGAGGAGTGAAATGCTTATCTTAAACTTAAAATTATGTTCTAGTTATTTTATTTAAAGAATAGTTAAAGAAAATATTTCCACACAGGTTAAATAAATTATAAAATATATAAAATTGATGAGTCTAAGAAAAAAAAATAACATGAGAGCTTATTTATTGAACTTTTATTTGCGACTTGTTGGGAGAGTTATTCTAAGTTGATTTTATGCGTGGGCTAAACTTAATTTTGTGATTAGTGAATTTTAAAATATAATTACATAATTTTTTGTTAAAATTAGTGGTCGAATTGATGAAACTACACTTAAATTGATATACATATGGTAACTGTTTAGAGTAAAAATATATTTTTTTCCATGAATTAATATACTTATAAAAAATATGTACAAAAAAATATAGGACCTTCCTGAGAATCATAGAGTAGATGCTGCGAGCAGTTTGGTATACGAAGCAAGCGCTAGGATTCGAGACCCAATCTATGGTTGCACAGGAGCAATTTTTCAACTTCAAAATCAAGTGAGTGAGCTCCATGCACAATTGGCTATGGCAAAAGCTGAGATTCATAAGATGCAACTTCAACAAGCAAATTTGTTAACCCTAATTTGCACGGAAACAAGTCAACTTCAAGACCAAGAGGATTCCATCTTGAGCCAACAACACTTTCCGTTTACTGATTTTAGCCCTCTTCCATATAACAAATTTTCTGACATTTGA

mRNA sequence

ATGTCCCCGCCGCCGCCGCCGACGACGGTGGTTCTCAGCCCGTGCGCCGCTTGTAAGATCCTCCGCCGGAGATGCGTCAATAAGTGTGTTTTGGCGCCTTATTTTCCTCCCACTGAGCCACTCAAGTTCGCCGCCGTGCATCGAATATTTGGAGCCGGCAACGTCATCAAGTTCTTGCAGGACCTTCCTGAGAATCATAGAGTAGATGCTGCGAGCAGTTTGGTATACGAAGCAAGCGCTAGGATTCGAGACCCAATCTATGGTTGCACAGGAGCAATTTTTCAACTTCAAAATCAAGTGAGTGAGCTCCATGCACAATTGGCTATGGCAAAAGCTGAGATTCATAAGATGCAACTTCAACAAGCAAATTTGTTAACCCTAATTTGCACGGAAACAAGTCAACTTCAAGACCAAGAGGATTCCATCTTGAGCCAACAACACTTTCCGTTTACTGATTTTAGCCCTCTTCCATATAACAAATTTTCTGACATTTGA

Coding sequence (CDS)

ATGTCCCCGCCGCCGCCGCCGACGACGGTGGTTCTCAGCCCGTGCGCCGCTTGTAAGATCCTCCGCCGGAGATGCGTCAATAAGTGTGTTTTGGCGCCTTATTTTCCTCCCACTGAGCCACTCAAGTTCGCCGCCGTGCATCGAATATTTGGAGCCGGCAACGTCATCAAGTTCTTGCAGGACCTTCCTGAGAATCATAGAGTAGATGCTGCGAGCAGTTTGGTATACGAAGCAAGCGCTAGGATTCGAGACCCAATCTATGGTTGCACAGGAGCAATTTTTCAACTTCAAAATCAAGTGAGTGAGCTCCATGCACAATTGGCTATGGCAAAAGCTGAGATTCATAAGATGCAACTTCAACAAGCAAATTTGTTAACCCTAATTTGCACGGAAACAAGTCAACTTCAAGACCAAGAGGATTCCATCTTGAGCCAACAACACTTTCCGTTTACTGATTTTAGCCCTCTTCCATATAACAAATTTTCTGACATTTGA

Protein sequence

MSPPPPPTTVVLSPCAACKILRRRCVNKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQDLPENHRVDAASSLVYEASARIRDPIYGCTGAIFQLQNQVSELHAQLAMAKAEIHKMQLQQANLLTLICTETSQLQDQEDSILSQQHFPFTDFSPLPYNKFSDI

Homology

[Close]

BLAST of Tan0013536 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 9.7e-46
Identity = 90/143 (62.94%), Postives = 110/143 (76.92%), Query Frame = 0


Query: 2   SPPPPPTT--VVLSPCAACKILRRRCVNKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFL 61
           S PPP  +  VVLSPCAACKILRRRC  +CVLAPYFPPT+P KF   HR+FGA N+IKFL
Sbjct: 19  SSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFL 78

Query: 62  QDLPENHRVDAASSLVYEASARIRDPIYGCTGAIFQLQNQVSELHAQLAMAKAEIHKMQL 121
           Q+LPE+ R DA +S+VYEA ARIRDP+YGC GAI+ LQ QVSEL AQLA A+ E+  MQ 
Sbjct: 79  QELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQF 138

Query: 122 QQANLLTLICTETSQLQDQEDSI 143
           Q++NLL LI     Q + ++D++
Sbjct: 139 QRSNLLELIYNMDQQQKQEQDNM 161

[Close]

BLAST of Tan0013536 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 183.7 bits (465), Expect = 1.6e-45
Identity = 93/146 (63.70%), Postives = 112/146 (76.71%), Query Frame = 0


Query: 2   SPPPPPT-------TVVLSPCAACKILRRRCVNKCVLAPYFPPTEPLKFAAVHRIFGAGN 61
           SPPPPP+        VVLSPCAACKILRRRC +KCVLAPYFPPT+P KF   HR+FGA N
Sbjct: 36  SPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASN 95

Query: 62  VIKFLQDLPENHRVDAASSLVYEASARIRDPIYGCTGAIFQLQNQVSELHAQLAMAKAEI 121
           +IKFLQ+LPE+ R DA +S+VYEA AR+RDP+YGC GAI+ LQ QVSEL AQLA  + E+
Sbjct: 96  IIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVEL 155

Query: 122 HKMQLQQANLLTLICT-ETSQLQDQE 140
             MQLQ+++LL LI   E ++L  QE
Sbjct: 156 VGMQLQRSSLLELIYNMEQTKLSVQE 181

[Close]

BLAST of Tan0013536 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 152.1 bits (383), Expect = 5.3e-36
Identity = 69/108 (63.89%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 13  SPCAACKILRRRCVNKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQDLPENHRVDAAS 72
           SPCA+CK+LRRRC   C+ APYFPP +P KFA VH++FGA NV K LQ+LP + R DA +
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 73  SLVYEASARIRDPIYGCTGAIFQLQNQVSELHAQLAMAKAEIHKMQLQ 121
           SLV+EA+AR+RDP+YGC GAI  LQNQVS+L  QLA+A+AEI  +Q+Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]

BLAST of Tan0013536 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.0e-34
Identity = 68/110 (61.82%), Postives = 86/110 (78.18%), Query Frame = 0


Query: 13  SPCAACKILRRRCVNKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQDLPENHRVDAAS 72
           SPCAACK+LRRRC   CV +PYFP  EP KFA VHR+FGA NV K LQ+LP + R DA S
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 73  SLVYEASARIRDPIYGCTGAIFQLQNQVSELHAQLAMAKAEIHKMQLQQA 123
           S+VYEA+AR+RDP+YGC GAI  LQ Q+  L AQLA+A+AE+  ++++Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

[Close]

BLAST of Tan0013536 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 146.0 bits (367), Expect = 3.8e-34
Identity = 71/131 (54.20%), Postives = 94/131 (71.76%), Query Frame = 0


Query: 5   PPPTTVVLSPCAACKILRRRCVNKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQDLPE 64
           PP T   ++PCAACK+LRRRC  +C  +PYF P EP KFA+VH++FGA NV K L ++PE
Sbjct: 36  PPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPE 95

Query: 65  NHRVDAASSLVYEASARIRDPIYGCTGAIFQLQNQVSELHAQLAMAKAEIHKMQLQQANL 124
           + R DAA+SLVYEA+ R+RDP+YGC GAI  LQ QV  L A+L   ++EI K + ++A +
Sbjct: 96  SQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA-V 155

Query: 125 LTLICTETSQL 136
            TLI    SQ+
Sbjct: 156 ATLIVPSNSQV 165

[Close]

BLAST of Tan0013536 vs. NCBI nr
Match: KAG7016272.1 (LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 261.9 bits (668), Expect = 3.6e-66
Identity = 127/159 (79.87%), Postives = 142/159 (89.31%), Query Frame = 0


Query: 3   PPPPPTTVVLSPCAACKILRRRCVNKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQDL 62
           PPPPP  VVLSPCAACKILRRRCV+KCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQ+L
Sbjct: 5   PPPPPLMVVLSPCAACKILRRRCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQEL 64

Query: 63  PENHRVDAASSLVYEASARIRDPIYGCTGAIFQLQNQVSELHAQLAMAKAEIHKMQLQQA 122
           PEN R DA SSLVYEA+ARIRDP+YGCTG+IFQLQNQVSEL AQLA+AKAE+HKMQ Q A
Sbjct: 65  PENQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSELQAQLAVAKAEVHKMQAQHA 124

Query: 123 NLLTLICTETSQ--LQDQEDSILSQQHFPFTDFSPLPYN 160
           NLL L+CTETSQ  ++ Q+  +L Q HFPFTD +P+P+N
Sbjct: 125 NLLALMCTETSQVRVEGQQVPVLRQDHFPFTDLNPIPHN 163

[Close]

BLAST of Tan0013536 vs. NCBI nr
Match: KAG6578743.1 (LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 261.9 bits (668), Expect = 3.6e-66
Identity = 127/159 (79.87%), Postives = 142/159 (89.31%), Query Frame = 0


Query: 3   PPPPPTTVVLSPCAACKILRRRCVNKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQDL 62
           PPPPP  VVLSPCAACKILRRRCV+KCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQ+L
Sbjct: 5   PPPPPLMVVLSPCAACKILRRRCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQEL 64

Query: 63  PENHRVDAASSLVYEASARIRDPIYGCTGAIFQLQNQVSELHAQLAMAKAEIHKMQLQQA 122
           PEN R DA SSLVYEA+ARIRDP+YGCTG+IFQLQNQVSEL AQLA+AKAE+HKMQ Q A
Sbjct: 65  PENQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSELQAQLAVAKAEVHKMQAQHA 124

Query: 123 NLLTLICTETSQ--LQDQEDSILSQQHFPFTDFSPLPYN 160
           NLL L+CTETSQ  ++ Q+  +L Q HFPFTD +P+P+N
Sbjct: 125 NLLALMCTETSQVRVEGQQVPVLRQDHFPFTDLNPIPHN 163

[Close]

BLAST of Tan0013536 vs. NCBI nr
Match: XP_022939142.1 (LOB domain-containing protein 1-like [Cucurbita moschata])

HSP 1 Score: 257.7 bits (657), Expect = 6.9e-65
Identity = 125/159 (78.62%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 3   PPPPPTTVVLSPCAACKILRRRCVNKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQDL 62
           PPPPP  VVLSPCAACKILRRRCV+KCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQ+L
Sbjct: 6   PPPPPLMVVLSPCAACKILRRRCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQEL 65

Query: 63  PENHRVDAASSLVYEASARIRDPIYGCTGAIFQLQNQVSELHAQLAMAKAEIHKMQLQQA 122
           PEN R DA SSLVYEA+ARIRDP+YGCTG+IFQLQNQVSEL  QLA+AKAE+HKM  Q A
Sbjct: 66  PENQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSELQVQLAVAKAEVHKMLAQHA 125

Query: 123 NLLTLICTETSQ--LQDQEDSILSQQHFPFTDFSPLPYN 160
           NLL L+CTETSQ  ++ Q+  +L Q HFPFTD +P+P+N
Sbjct: 126 NLLALMCTETSQVRVEGQQVPVLRQDHFPFTDLNPIPHN 164

[Close]

BLAST of Tan0013536 vs. NCBI nr
Match: XP_023551518.1 (LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 249.2 bits (635), Expect = 2.4e-62
Identity = 125/158 (79.11%), Postives = 140/158 (88.61%), Query Frame = 0


Query: 10  VVLSPCAACKILRRRCVNKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQDLPENHRVD 69
           VVLSPCAACKILRRRCV+KCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQ+LPEN R D
Sbjct: 2   VVLSPCAACKILRRRCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQELPENQRAD 61

Query: 70  AASSLVYEASARIRDPIYGCTGAIFQLQNQVSELHAQLAMAKAEIHKMQLQQANLLTLIC 129
           A SSLVYEA+ARIRDPIYGCTG+IFQLQNQVSEL AQLA+AKAE+HKMQ Q ANLL L+C
Sbjct: 62  ATSSLVYEANARIRDPIYGCTGSIFQLQNQVSELQAQLAVAKAEVHKMQAQHANLLALMC 121

Query: 130 TETSQ--LQDQEDSILSQQHFPFTDFSPLP-YNKFSDI 165
           TETSQ  ++ +E  +L Q HFPF+D +P+P Y K S+I
Sbjct: 122 TETSQVRVEGREVPVLCQDHFPFSDLNPIPHYYKSSNI 159

[Close]

BLAST of Tan0013536 vs. NCBI nr
Match: XP_022993359.1 (LOB domain-containing protein 1-like [Cucurbita maxima])

HSP 1 Score: 244.6 bits (623), Expect = 6.0e-61
Identity = 120/152 (78.95%), Postives = 134/152 (88.16%), Query Frame = 0


Query: 10  VVLSPCAACKILRRRCVNKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQDLPENHRVD 69
           VVLSPCAACKILRRRCV++CVLAPYFPPTEPLKFAAVHRIFGA NVIKFLQ+LP N R D
Sbjct: 2   VVLSPCAACKILRRRCVDECVLAPYFPPTEPLKFAAVHRIFGASNVIKFLQELPGNQRAD 61

Query: 70  AASSLVYEASARIRDPIYGCTGAIFQLQNQVSELHAQLAMAKAEIHKMQLQQANLLTLIC 129
           A SSLVYEA+ARIRDP+YGCTG+IFQLQNQVSEL AQLA+AKAE+HKMQ Q ANLL LIC
Sbjct: 62  ATSSLVYEANARIRDPVYGCTGSIFQLQNQVSELQAQLALAKAEVHKMQAQNANLLALIC 121

Query: 130 TETSQLQ--DQEDSILSQQHFPFTDFSPLPYN 160
           TETSQ+Q   +E  +L Q HFPFTD + +P+N
Sbjct: 122 TETSQVQVEGREVPVLRQDHFPFTDLNSIPHN 153

[Close]

BLAST of Tan0013536 vs. ExPASy TrEMBL
Match: A0A6J1FFZ7 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111445138 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.3e-65
Identity = 125/159 (78.62%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 3   PPPPPTTVVLSPCAACKILRRRCVNKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQDL 62
           PPPPP  VVLSPCAACKILRRRCV+KCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQ+L
Sbjct: 6   PPPPPLMVVLSPCAACKILRRRCVDKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQEL 65

Query: 63  PENHRVDAASSLVYEASARIRDPIYGCTGAIFQLQNQVSELHAQLAMAKAEIHKMQLQQA 122
           PEN R DA SSLVYEA+ARIRDP+YGCTG+IFQLQNQVSEL  QLA+AKAE+HKM  Q A
Sbjct: 66  PENQRADATSSLVYEANARIRDPVYGCTGSIFQLQNQVSELQVQLAVAKAEVHKMLAQHA 125

Query: 123 NLLTLICTETSQ--LQDQEDSILSQQHFPFTDFSPLPYN 160
           NLL L+CTETSQ  ++ Q+  +L Q HFPFTD +P+P+N
Sbjct: 126 NLLALMCTETSQVRVEGQQVPVLRQDHFPFTDLNPIPHN 164

[Close]

BLAST of Tan0013536 vs. ExPASy TrEMBL
Match: A0A6J1JZZ3 (LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111489400 PE=3 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.9e-61
Identity = 120/152 (78.95%), Postives = 134/152 (88.16%), Query Frame = 0


Query: 10  VVLSPCAACKILRRRCVNKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQDLPENHRVD 69
           VVLSPCAACKILRRRCV++CVLAPYFPPTEPLKFAAVHRIFGA NVIKFLQ+LP N R D
Sbjct: 2   VVLSPCAACKILRRRCVDECVLAPYFPPTEPLKFAAVHRIFGASNVIKFLQELPGNQRAD 61

Query: 70  AASSLVYEASARIRDPIYGCTGAIFQLQNQVSELHAQLAMAKAEIHKMQLQQANLLTLIC 129
           A SSLVYEA+ARIRDP+YGCTG+IFQLQNQVSEL AQLA+AKAE+HKMQ Q ANLL LIC
Sbjct: 62  ATSSLVYEANARIRDPVYGCTGSIFQLQNQVSELQAQLALAKAEVHKMQAQNANLLALIC 121

Query: 130 TETSQLQ--DQEDSILSQQHFPFTDFSPLPYN 160
           TETSQ+Q   +E  +L Q HFPFTD + +P+N
Sbjct: 122 TETSQVQVEGREVPVLRQDHFPFTDLNSIPHN 153

[Close]

BLAST of Tan0013536 vs. ExPASy TrEMBL
Match: A0A0A0KU20 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G496470 PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 5.3e-55
Identity = 120/161 (74.53%), Postives = 136/161 (84.47%), Query Frame = 0


Query: 2   SPPPPPTTVVLSPCAACKILRRRCVNKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQD 61
           S  PPP TVVLSPCAACKILRRRCV+KC+LAPYFPPT+P KFAAVHRI+GAGNVIKFLQ+
Sbjct: 3   SSSPPPCTVVLSPCAACKILRRRCVDKCILAPYFPPTDPFKFAAVHRIYGAGNVIKFLQE 62

Query: 62  LPENHRVDAASSLVYEASARIRDPIYGCTGAIFQLQNQVSELHAQLAMAKAEIHKM-QLQ 121
           LPE  R DAASSLVYEA+ARIRDPIYGCTG+IFQLQN+V ELHAQLA+AKAE+HKM QLQ
Sbjct: 63  LPEGQRADAASSLVYEANARIRDPIYGCTGSIFQLQNKVRELHAQLAVAKAEVHKMQQLQ 122

Query: 122 QANLLTLICTETSQLQDQED-SILSQ-QHFPFTDF-SPLPY 159
             NLL L     SQ Q+Q++  I +Q Q+FPF DF S LP+
Sbjct: 123 HPNLLAL---PRSQFQEQQNYCIFTQLQNFPFPDFTSHLPH 160

[Close]

BLAST of Tan0013536 vs. ExPASy TrEMBL
Match: A0A7J9KLE0 (LOB domain-containing protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_015451 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 9.4e-52
Identity = 107/160 (66.88%), Postives = 123/160 (76.88%), Query Frame = 0


Query: 3   PPPPPTTVVLSPCAACKILRRRCVNKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQDL 62
           PPPPPT+VV+SPCAACKILRRRC +KCVLAPYFPPTEP KF   HR+FGA N+IKFLQ+L
Sbjct: 27  PPPPPTSVVISPCAACKILRRRCADKCVLAPYFPPTEPTKFTIAHRVFGASNIIKFLQEL 86

Query: 63  PENHRVDAASSLVYEASARIRDPIYGCTGAIFQLQNQVSELHAQLAMAKAEIHKMQLQQA 122
           PE+ R DA SS+VYEASARIRDP+YGCTGAI QLQ QV+EL AQLA A+AE+  MQLQQA
Sbjct: 87  PESQRADAVSSMVYEASARIRDPVYGCTGAICQLQKQVNELQAQLAKAQAEVVNMQLQQA 146

Query: 123 NLLTLICTETSQLQDQEDSILSQQHFPFTDF---SPLPYN 160
           NL+ L+C E +Q   Q        H P  DF   SP  Y+
Sbjct: 147 NLVALLCLEVAQSPQQ------NPHQPIDDFLSNSPQSYH 180

[Close]

BLAST of Tan0013536 vs. ExPASy TrEMBL
Match: A0A7J8YXG7 (LOB domain-containing protein OS=Gossypium laxum OX=34288 GN=Golax_016467 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 9.4e-52
Identity = 107/160 (66.88%), Postives = 123/160 (76.88%), Query Frame = 0


Query: 3   PPPPPTTVVLSPCAACKILRRRCVNKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQDL 62
           PPPPPT+VV+SPCAACKILRRRC +KCVLAPYFPPTEP KF   HR+FGA N+IKFLQ+L
Sbjct: 27  PPPPPTSVVISPCAACKILRRRCADKCVLAPYFPPTEPTKFTIAHRVFGASNIIKFLQEL 86

Query: 63  PENHRVDAASSLVYEASARIRDPIYGCTGAIFQLQNQVSELHAQLAMAKAEIHKMQLQQA 122
           PE+ R DA SS+VYEASARIRDP+YGCTGAI QLQ QV+EL AQLA A+AE+  MQLQQA
Sbjct: 87  PESQRADAVSSMVYEASARIRDPVYGCTGAICQLQKQVNELQAQLAKAQAEVVNMQLQQA 146

Query: 123 NLLTLICTETSQLQDQEDSILSQQHFPFTDF---SPLPYN 160
           NL+ L+C E +Q   Q        H P  DF   SP  Y+
Sbjct: 147 NLVALLCLEVAQSPQQ------NPHQPIDDFLSNSPQSYH 180

[Close]

BLAST of Tan0013536 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 184.5 bits (467), Expect = 6.9e-47
Identity = 90/143 (62.94%), Postives = 110/143 (76.92%), Query Frame = 0


Query: 2   SPPPPPTT--VVLSPCAACKILRRRCVNKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFL 61
           S PPP  +  VVLSPCAACKILRRRC  +CVLAPYFPPT+P KF   HR+FGA N+IKFL
Sbjct: 19  SSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFL 78

Query: 62  QDLPENHRVDAASSLVYEASARIRDPIYGCTGAIFQLQNQVSELHAQLAMAKAEIHKMQL 121
           Q+LPE+ R DA +S+VYEA ARIRDP+YGC GAI+ LQ QVSEL AQLA A+ E+  MQ 
Sbjct: 79  QELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQF 138

Query: 122 QQANLLTLICTETSQLQDQEDSI 143
           Q++NLL LI     Q + ++D++
Sbjct: 139 QRSNLLELIYNMDQQQKQEQDNM 161

[Close]

BLAST of Tan0013536 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 183.7 bits (465), Expect = 1.2e-46
Identity = 93/146 (63.70%), Postives = 112/146 (76.71%), Query Frame = 0


Query: 2   SPPPPPT-------TVVLSPCAACKILRRRCVNKCVLAPYFPPTEPLKFAAVHRIFGAGN 61
           SPPPPP+        VVLSPCAACKILRRRC +KCVLAPYFPPT+P KF   HR+FGA N
Sbjct: 36  SPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLAPYFPPTDPAKFTIAHRVFGASN 95

Query: 62  VIKFLQDLPENHRVDAASSLVYEASARIRDPIYGCTGAIFQLQNQVSELHAQLAMAKAEI 121
           +IKFLQ+LPE+ R DA +S+VYEA AR+RDP+YGC GAI+ LQ QVSEL AQLA  + E+
Sbjct: 96  IIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGAIYHLQRQVSELQAQLAKTQVEL 155

Query: 122 HKMQLQQANLLTLICT-ETSQLQDQE 140
             MQLQ+++LL LI   E ++L  QE
Sbjct: 156 VGMQLQRSSLLELIYNMEQTKLSVQE 181

[Close]

BLAST of Tan0013536 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 152.1 bits (383), Expect = 3.8e-37
Identity = 69/108 (63.89%), Postives = 87/108 (80.56%), Query Frame = 0


Query: 13  SPCAACKILRRRCVNKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQDLPENHRVDAAS 72
           SPCA+CK+LRRRC   C+ APYFPP +P KFA VH++FGA NV K LQ+LP + R DA +
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 73  SLVYEASARIRDPIYGCTGAIFQLQNQVSELHAQLAMAKAEIHKMQLQ 121
           SLV+EA+AR+RDP+YGC GAI  LQNQVS+L  QLA+A+AEI  +Q+Q
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQ 114

[Close]

BLAST of Tan0013536 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 147.9 bits (372), Expect = 7.1e-36
Identity = 68/110 (61.82%), Postives = 86/110 (78.18%), Query Frame = 0


Query: 13  SPCAACKILRRRCVNKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQDLPENHRVDAAS 72
           SPCAACK+LRRRC   CV +PYFP  EP KFA VHR+FGA NV K LQ+LP + R DA S
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 73  SLVYEASARIRDPIYGCTGAIFQLQNQVSELHAQLAMAKAEIHKMQLQQA 123
           S+VYEA+AR+RDP+YGC GAI  LQ Q+  L AQLA+A+AE+  ++++Q+
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQS 121

[Close]

BLAST of Tan0013536 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 146.0 bits (367), Expect = 2.7e-35
Identity = 71/131 (54.20%), Postives = 94/131 (71.76%), Query Frame = 0


Query: 5   PPPTTVVLSPCAACKILRRRCVNKCVLAPYFPPTEPLKFAAVHRIFGAGNVIKFLQDLPE 64
           PP T   ++PCAACK+LRRRC  +C  +PYF P EP KFA+VH++FGA NV K L ++PE
Sbjct: 36  PPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPE 95

Query: 65  NHRVDAASSLVYEASARIRDPIYGCTGAIFQLQNQVSELHAQLAMAKAEIHKMQLQQANL 124
           + R DAA+SLVYEA+ R+RDP+YGC GAI  LQ QV  L A+L   ++EI K + ++A +
Sbjct: 96  SQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA-V 155

Query: 125 LTLICTETSQL 136
            TLI    SQ+
Sbjct: 156 ATLIVPSNSQV 165

The following BLAST results are available for this feature:

BLAST of Tan0013536 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LQR0	9.7e-46	62.94	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]
Q9SK08	1.6e-45	63.70	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]
Q8LBW3	5.3e-36	63.89	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q9SHE9	1.0e-34	61.82	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8L5T5	3.8e-34	54.20	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]

BLAST of Tan0013536 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7016272.1	3.6e-66	79.87	LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
KAG6578743.1	3.6e-66	79.87	LOB domain-containing protein 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022939142.1	6.9e-65	78.62	LOB domain-containing protein 1-like [Cucurbita moschata]	[more]
XP_023551518.1	2.4e-62	79.11	LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022993359.1	6.0e-61	78.95	LOB domain-containing protein 1-like [Cucurbita maxima]	[more]

BLAST of Tan0013536 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FFZ7	3.3e-65	78.62	LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]
A0A6J1JZZ3	2.9e-61	78.95	LOB domain-containing protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111489400...	[more]
A0A0A0KU20	5.3e-55	74.53	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G496470 PE=3 SV...	[more]
A0A7J9KLE0	9.4e-52	66.88	LOB domain-containing protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_01545...	[more]
A0A7J8YXG7	9.4e-52	66.88	LOB domain-containing protein OS=Gossypium laxum OX=34288 GN=Golax_016467 PE=3 S...	[more]

BLAST of Tan0013536 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07900.1	6.9e-47	62.94	LOB domain-containing protein 1	[more]
AT2G28500.1	1.2e-46	63.70	LOB domain-containing protein 11	[more]
AT2G30130.1	3.8e-37	63.89	Lateral organ boundaries (LOB) domain family protein	[more]
AT1G31320.1	7.1e-36	61.82	LOB domain-containing protein 4	[more]
AT2G40470.1	2.7e-35	54.20	LOB domain-containing protein 15	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 93..120
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 7..141
None	No IPR available	PANTHER	PTHR31301:SF137	LOB DOMAIN-CONTAINING PROTEIN 1	coord: 7..141
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 14..111 e-value: 3.3E-40 score: 136.7
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 13..114 score: 25.803192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013536.1	Tan0013536.1	mRNA