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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGCCTGCCATATGCATTGATCATATAGCTTTTCAGGTATGCTTGTGAGGTTGTACAGTATTATGTTTAGTTATTATCCAATAGTTTGATTTGCTGTTTGATTATGGATTTGCCAAAATCTTGTGGATGCAGTGTTTACTAGATTTCCAACCCAGTTTCTGTGGAGTGAAAGGGAAGGAAAAGACCAATGGGATCCACCATAGCAGTGAGATGGTTGCAGAATTTAATGCTGACAACCCAACTTGTTCCATCTTATATTTTTTTCTCTGTACTATCACTTAA mRNA sequence ATGCCTGCCATATGCATTGATCATATAGCTTTTCAGTGTTTACTAGATTTCCAACCCAGTTTCTGTGGAGTGAAAGGGAAGGAAAAGACCAATGGGATCCACCATAGCAGTGAGATGGTTGCAGAATTTAATGCTGACAACCCAACTTGTTCCATCTTATATTTTTTTCTCTGTACTATCACTTAA Coding sequence (CDS) ATGCCTGCCATATGCATTGATCATATAGCTTTTCAGTGTTTACTAGATTTCCAACCCAGTTTCTGTGGAGTGAAAGGGAAGGAAAAGACCAATGGGATCCACCATAGCAGTGAGATGGTTGCAGAATTTAATGCTGACAACCCAACTTGTTCCATCTTATATTTTTTTCTCTGTACTATCACTTAA Protein sequence MPAICIDHIAFQCLLDFQPSFCGVKGKEKTNGIHHSSEMVAEFNADNPTCSILYFFLCTIT
Homology
BLAST of Tan0013407 vs. NCBI nr
Match: KGN63987.1 (hypothetical protein Csa_014108 [Cucumis sativus]) HSP 1 Score: 114.8 bits (286), Expect = 2.7e-22 Identity = 52/57 (91.23%), Postives = 53/57 (92.98%), Query Frame = 0
Query: 1 MPAICIDHIAFQCLLDFQPSFCGVKGKEKTNGIHHSSEMVAEFNADNPTCSILYFFL 58
MPAIC DHIAFQCLLDFQPSFCGVKGKEKTNGIHHSS+MVAEFNA NPTCS LYF L
Sbjct: 1 MPAICFDHIAFQCLLDFQPSFCGVKGKEKTNGIHHSSKMVAEFNAANPTCSSLYFSL 57
BLAST of Tan0013407 vs. NCBI nr
Match: KAG6584453.1 (hypothetical protein SDJN03_20385, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 76.3 bits (186), Expect = 1.1e-10 Identity = 34/38 (89.47%), Postives = 35/38 (92.11%), Query Frame = 0
Query: 18 QPSFCGVKGKEKTNGIHHSSEMVAEFNADNPTCSILYF 56
QPSFCGV+ KEKTNGIHHSSEMVAEFNA NPTCS LYF
Sbjct: 7 QPSFCGVQEKEKTNGIHHSSEMVAEFNAANPTCSTLYF 44
BLAST of Tan0013407 vs. ExPASy TrEMBL
Match: A0A0A0LTA5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G033070 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 1.3e-22 Identity = 52/57 (91.23%), Postives = 53/57 (92.98%), Query Frame = 0
Query: 1 MPAICIDHIAFQCLLDFQPSFCGVKGKEKTNGIHHSSEMVAEFNADNPTCSILYFFL 58
MPAIC DHIAFQCLLDFQPSFCGVKGKEKTNGIHHSS+MVAEFNA NPTCS LYF L
Sbjct: 1 MPAICFDHIAFQCLLDFQPSFCGVKGKEKTNGIHHSSKMVAEFNAANPTCSSLYFSL 57
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
|---|
| KGN63987.1 | 2.7e-22 | 91.23 | hypothetical protein Csa_014108 [Cucumis sativus] | [more] |
| KAG6584453.1 | 1.1e-10 | 89.47 | hypothetical protein SDJN03_20385, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LTA5 | 1.3e-22 | 91.23 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G033070 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
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