Tan0013384 (gene) Snake gourd v1

Overview
NameTan0013384
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionCDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
LocationLG05: 7026614 .. 7026877 (-)
RNA-Seq ExpressionTan0013384
SyntenyTan0013384
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGCAAAGCACCAAGCTGGGCTGATCAGTGGGGTTCGGGGAATTACGGAGTTGAAGATGATGACGACAAAACAGTGACGAAGAAAGGGAGCAGCAATGGAAATAGTAGCAAGAAGATGGCAGAGGTAAAGGCAGCAGCCTCAGCTGGATTTGTGAAGGCCAAGACTGTTGCAGCTGTGGGTGCTCAAAAAGTGAAATCTGGAACTTCAGTAGGCATCAAATGGGTCAAGAATCAGTACCAGAAAAAGGTCTCCAAATGA

mRNA sequence

ATGGGAAGCAAAGCACCAAGCTGGGCTGATCAGTGGGGTTCGGGGAATTACGGAGTTGAAGATGATGACGACAAAACAGTGACGAAGAAAGGGAGCAGCAATGGAAATAGTAGCAAGAAGATGGCAGAGGTAAAGGCAGCAGCCTCAGCTGGATTTGTGAAGGCCAAGACTGTTGCAGCTGTGGGTGCTCAAAAAGTGAAATCTGGAACTTCAGTAGGCATCAAATGGGTCAAGAATCAGTACCAGAAAAAGGTCTCCAAATGA

Coding sequence (CDS)

ATGGGAAGCAAAGCACCAAGCTGGGCTGATCAGTGGGGTTCGGGGAATTACGGAGTTGAAGATGATGACGACAAAACAGTGACGAAGAAAGGGAGCAGCAATGGAAATAGTAGCAAGAAGATGGCAGAGGTAAAGGCAGCAGCCTCAGCTGGATTTGTGAAGGCCAAGACTGTTGCAGCTGTGGGTGCTCAAAAAGTGAAATCTGGAACTTCAGTAGGCATCAAATGGGTCAAGAATCAGTACCAGAAAAAGGTCTCCAAATGA

Protein sequence

MGSKAPSWADQWGSGNYGVEDDDDKTVTKKGSSNGNSSKKMAEVKAAASAGFVKAKTVAAVGAQKVKSGTSVGIKWVKNQYQKKVSK
Homology
BLAST of Tan0013384 vs. NCBI nr
Match: KAG7010736.1 (hypothetical protein SDJN02_27532, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 149.4 bits (376), Expect = 1.4e-32
Identity = 79/87 (90.80%), Postives = 84/87 (96.55%), Query Frame = 0

Query: 1  MGSKAPSWADQWGSGNYGVEDDDDKTVTKKGSSNGNSSKKMAEVKAAASAGFVKAKTVAA 60
          MGSKAPSWADQWGSG+YGVEDDD+  +TKKGSSNGNSSKKMA+VKAAASAGFVKAK+ AA
Sbjct: 1  MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAA 60

Query: 61 VGAQKVKSGTSVGIKWVKNQYQKKVSK 88
          VGAQKVKSGTSVGIKWVKNQYQKKVSK
Sbjct: 61 VGAQKVKSGTSVGIKWVKNQYQKKVSK 87

BLAST of Tan0013384 vs. NCBI nr
Match: KAA0059574.1 (hypothetical protein E6C27_scaffold4837G00020 [Cucumis melo var. makuwa] >KAE8652289.1 hypothetical protein Csa_022099 [Cucumis sativus] >TYK24204.1 hypothetical protein E5676_scaffold27G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 149.1 bits (375), Expect = 1.8e-32
Identity = 82/88 (93.18%), Postives = 83/88 (94.32%), Query Frame = 0

Query: 1  MGSKAPSWADQWGSGNYGVEDDD-DKTVTKKGSSNGNSSKKMAEVKAAASAGFVKAKTVA 60
          MGSKAPSWADQWGSGNYGVEDDD +  VTKKGSSNGNSSKKMAEVKAAASAGFVKAK VA
Sbjct: 1  MGSKAPSWADQWGSGNYGVEDDDNNNAVTKKGSSNGNSSKKMAEVKAAASAGFVKAKAVA 60

Query: 61 AVGAQKVKSGTSVGIKWVKNQYQKKVSK 88
           VGAQKVKSGTSVGIKWVKNQYQKKVSK
Sbjct: 61 TVGAQKVKSGTSVGIKWVKNQYQKKVSK 88

BLAST of Tan0013384 vs. NCBI nr
Match: KAG7034974.1 (hypothetical protein SDJN02_01767, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 146.7 bits (369), Expect = 9.0e-32
Identity = 81/87 (93.10%), Postives = 82/87 (94.25%), Query Frame = 0

Query: 1   MGSKAPSWADQWGSGNYGVEDDDDKTVTKKGSSNGNSSKKMAEVKAAASAGFVKAKTVAA 60
           MGSKAPSWADQWGSGNYGVE DDDK V KKGSSNG+SSKKM EVKAAASAGFVKAK VAA
Sbjct: 91  MGSKAPSWADQWGSGNYGVE-DDDKMVAKKGSSNGSSSKKMTEVKAAASAGFVKAKAVAA 150

Query: 61  VGAQKVKSGTSVGIKWVKNQYQKKVSK 88
           VGAQKVKSGTSVGIKWVKNQYQKKVSK
Sbjct: 151 VGAQKVKSGTSVGIKWVKNQYQKKVSK 176

BLAST of Tan0013384 vs. NCBI nr
Match: KAG6570886.1 (hypothetical protein SDJN03_29801, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 146.0 bits (367), Expect = 1.5e-31
Identity = 77/86 (89.53%), Postives = 82/86 (95.35%), Query Frame = 0

Query: 1  MGSKAPSWADQWGSGNYGVEDDDDKTVTKKGSSNGNSSKKMAEVKAAASAGFVKAKTVAA 60
          MGSKAPSWADQWGSG+YGVEDDD+  +TKKGSSNGNSSKKMA+VKAAASAGFVKAK+ AA
Sbjct: 1  MGSKAPSWADQWGSGDYGVEDDDNTAMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAAA 60

Query: 61 VGAQKVKSGTSVGIKWVKNQYQKKVS 87
          VGAQKVKSGTSVGIKWVKNQYQKK S
Sbjct: 61 VGAQKVKSGTSVGIKWVKNQYQKKKS 86

BLAST of Tan0013384 vs. NCBI nr
Match: KAG6604861.1 (hypothetical protein SDJN03_02178, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 140.6 bits (353), Expect = 6.5e-30
Identity = 77/84 (91.67%), Postives = 78/84 (92.86%), Query Frame = 0

Query: 1   MGSKAPSWADQWGSGNYGVEDDDDKTVTKKGSSNGNSSKKMAEVKAAASAGFVKAKTVAA 60
           MGSKAPSWADQWGSGNYGVE DDDK V KKGS NG+SSKKM EVKAAASAGFVKAK VAA
Sbjct: 80  MGSKAPSWADQWGSGNYGVE-DDDKMVAKKGSGNGSSSKKMTEVKAAASAGFVKAKAVAA 139

Query: 61  VGAQKVKSGTSVGIKWVKNQYQKK 85
           VGAQKVKSGTSVGIKWVKNQYQKK
Sbjct: 140 VGAQKVKSGTSVGIKWVKNQYQKK 162

BLAST of Tan0013384 vs. ExPASy TrEMBL
Match: A0A5D3DKS5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00040 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 8.8e-33
Identity = 82/88 (93.18%), Postives = 83/88 (94.32%), Query Frame = 0

Query: 1  MGSKAPSWADQWGSGNYGVEDDD-DKTVTKKGSSNGNSSKKMAEVKAAASAGFVKAKTVA 60
          MGSKAPSWADQWGSGNYGVEDDD +  VTKKGSSNGNSSKKMAEVKAAASAGFVKAK VA
Sbjct: 1  MGSKAPSWADQWGSGNYGVEDDDNNNAVTKKGSSNGNSSKKMAEVKAAASAGFVKAKAVA 60

Query: 61 AVGAQKVKSGTSVGIKWVKNQYQKKVSK 88
           VGAQKVKSGTSVGIKWVKNQYQKKVSK
Sbjct: 61 TVGAQKVKSGTSVGIKWVKNQYQKKVSK 88

BLAST of Tan0013384 vs. ExPASy TrEMBL
Match: A0A0A0LR11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418340 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 8.8e-33
Identity = 82/88 (93.18%), Postives = 83/88 (94.32%), Query Frame = 0

Query: 1   MGSKAPSWADQWGSGNYGVEDDD-DKTVTKKGSSNGNSSKKMAEVKAAASAGFVKAKTVA 60
           MGSKAPSWADQWGSGNYGVEDDD +  VTKKGSSNGNSSKKMAEVKAAASAGFVKAK VA
Sbjct: 86  MGSKAPSWADQWGSGNYGVEDDDNNNAVTKKGSSNGNSSKKMAEVKAAASAGFVKAKAVA 145

Query: 61  AVGAQKVKSGTSVGIKWVKNQYQKKVSK 88
            VGAQKVKSGTSVGIKWVKNQYQKKVSK
Sbjct: 146 TVGAQKVKSGTSVGIKWVKNQYQKKVSK 173

BLAST of Tan0013384 vs. ExPASy TrEMBL
Match: A0A5C7HG95 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_020628 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.8e-25
Identity = 69/86 (80.23%), Postives = 76/86 (88.37%), Query Frame = 0

Query: 1  MGSKAPSWADQWGSGNYGVEDDDDKTVTKKGSSNGNSSKKMAEVKAAASAGFVKAKTVAA 60
          MGSKAPSWADQWGSG++G E+DD+K VTKK SS+G SSKKMAE KAAASAGF KAK  A+
Sbjct: 1  MGSKAPSWADQWGSGSFGDEEDDNKLVTKK-SSSGGSSKKMAEAKAAASAGFDKAKAAAS 60

Query: 61 VGAQKVKSGTSVGIKWVKNQYQKKVS 87
          VGAQKVKSGTSVG+KWVK QYQKK S
Sbjct: 61 VGAQKVKSGTSVGLKWVKKQYQKKSS 85

BLAST of Tan0013384 vs. ExPASy TrEMBL
Match: V4UEV4 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017336mg PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 8.3e-23
Identity = 63/86 (73.26%), Postives = 73/86 (84.88%), Query Frame = 0

Query: 1  MGSKAPSWADQWGSGNYGVEDDDDKTVTKKGSSNGNSSKKMAEVKAAASAGFVKAKTVAA 60
          MGSKAPSWADQWG+G +GV+++DDK VTK  SS+G +  K+ EVKAAASAGF KAK+ AA
Sbjct: 1  MGSKAPSWADQWGTGGFGVDEEDDKLVTKNASSSGGN--KITEVKAAASAGFDKAKSAAA 60

Query: 61 VGAQKVKSGTSVGIKWVKNQYQKKVS 87
          VGAQKVK+GTS GIKWVK QYQKK S
Sbjct: 61 VGAQKVKAGTSAGIKWVKKQYQKKGS 84

BLAST of Tan0013384 vs. ExPASy TrEMBL
Match: A0A2G5E5C3 (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_01100038v1 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 9.1e-22
Identity = 62/87 (71.26%), Postives = 69/87 (79.31%), Query Frame = 0

Query: 1  MGSKAPSWADQWGSGNYGVEDDDDKTVTKKGSSNGNSSKKMAEVKAAASAGFVKAKTVAA 60
          M  +APSWADQWGSG YG + +DD   TKKGSS   S KKMA++K+ ASAG  KAK  AA
Sbjct: 1  MAKEAPSWADQWGSGGYGADPEDDHNNTKKGSS--GSGKKMADMKSTASAGLDKAKAAAA 60

Query: 61 VGAQKVKSGTSVGIKWVKNQYQKKVSK 88
          VGAQKVKSGTSVGIKW+KNQYQKK SK
Sbjct: 61 VGAQKVKSGTSVGIKWMKNQYQKKTSK 85

BLAST of Tan0013384 vs. TAIR 10
Match: AT3G48180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G19020.1); Has 84 Blast hits to 84 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 44.3 bits (103), Expect = 5.9e-05
Identity = 34/81 (41.98%), Postives = 43/81 (53.09%), Query Frame = 0

Query: 7  SWADQWGSGNYGVEDDDDKTVTKKGSSNGNSSKKMAEVKAAASAGFVKAKTVAAVGAQKV 66
          SWA+QW S     +    KT T  G   G SSK     K    AG  K K  A+ G +KV
Sbjct: 5  SWAEQWDSN----QQSSGKT-THGGEGGGASSK----YKEKVGAGLGKTKAAASSGLKKV 64

Query: 67 KSGTSVGIKWVKNQYQKKVSK 88
          K GTS+G+ WVK++Y K  +K
Sbjct: 65 KIGTSLGLNWVKDKYNKTTTK 76

BLAST of Tan0013384 vs. TAIR 10
Match: AT1G11740.1 (ankyrin repeat family protein )

HSP 1 Score: 42.0 bits (97), Expect = 2.9e-04
Identity = 31/84 (36.90%), Postives = 40/84 (47.62%), Query Frame = 0

Query: 1   MGSKAPSWADQWGSGNYGVEDDDDKTVTKKGSSNGNSSKKMAEVKAAASAGFVKAKTVAA 60
           M S+APSWADQWG+G  GV   ++ T  KK  +   S K          AG  KAK V  
Sbjct: 573 MASEAPSWADQWGTGGIGVMAAEETTDGKKDVTGKKSGK--------TKAGINKAKIV-- 632

Query: 61  VGAQKVKSGTSVGIKWVKNQYQKK 85
                      +G+ W+KN  Q+K
Sbjct: 633 ---------VFIGVNWMKNLVQRK 637

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG7010736.11.4e-3290.80hypothetical protein SDJN02_27532, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAA0059574.11.8e-3293.18hypothetical protein E6C27_scaffold4837G00020 [Cucumis melo var. makuwa] >KAE865... [more]
KAG7034974.19.0e-3293.10hypothetical protein SDJN02_01767, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6570886.11.5e-3189.53hypothetical protein SDJN03_29801, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6604861.16.5e-3091.67hypothetical protein SDJN03_02178, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
A0A5D3DKS58.8e-3393.18Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LR118.8e-3393.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418340 PE=4 SV=1[more]
A0A5C7HG951.8e-2580.23Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_020628 PE=4 SV=1[more]
V4UEV48.3e-2373.26Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017336mg PE=4 ... [more]
A0A2G5E5C39.1e-2271.26Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_01100038v1 PE=4... [more]
Match NameE-valueIdentityDescription
AT3G48180.15.9e-0541.98unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G11740.12.9e-0436.90ankyrin repeat family protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..43
NoneNo IPR availablePANTHERPTHR33386OS02G0740600 PROTEINcoord: 1..87
NoneNo IPR availablePANTHERPTHR33386:SF13ANKYRIN REPEAT PROTEINcoord: 1..87

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0013384.1Tan0013384.1mRNA