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Tan0013383 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAACAAGCTGCGTTGGGGAATGGCTATTTCCTTCAATTTTCTCTCATCCACCGCCGCCACCCTTTTTCTTTTTTTTTCTTTTTCCTCATCCCCTTCGTCATCACTGTTCTACACGGCAACGCGCAGAATCGCTCTACATATAAACATAAACACCTCCAACTCAAAATTCATCATTCAAATCAACATTCAATCCTTAAACCCAATTCCCAATTCTCCAAATTCCAAGAGATCATGGACAAATTCTCGTGCTACGACAGAGTATTCAACAGCATAGACACCGACTGCGACGGCAAGGTCTCCCCTCACGACCTGCTCAGCCGTTTCGCGGCGGTGACAGGGGAGGAGCTCACGGAGGCCGAGGCAGCGGAGGCTATGGCGGCCTACGATTCGGACGGCGACGGACTGCTGGAGATGGCGGAGTTCGGGAGGTTCGTGGAGGAGGGGGATGAACAGGGGAAGGAGATGAGAGAGGCTTTTGAGATGTATGAAATGGAGGGTTTGGGAGTGATTACGCCGGTGAGCCTCCGCCGGATGCTCAGCCGCCTTGGGGAATCGAGGACCGTCGGCGATTGCAAGAGAATGATCGCTAAATTTGATGTCAATGGCGATGGAGTTCTCTGTTTTGATGAGTTTAAAGTTATGATGTTGCTTTAATATTGTAAATGGTGTGTCAGTCTTCGTTTTTGATTCAGGGTTCGCTGTTGGGAAACACAAGCATTATATTGAAGTTTAGAAATTCTTTTTAGAACAGAAAATAGATTAGTTTGCACTTTGCATATATATGTTAGAAAATTATTTATTTTTTCTGTTGATTAAATTCAAATTGGGATGTGAGGACTTTTGAGGTATGGAATGTTTTGACTAATTAAATGATCTTTATGTTGAATTTCAGGTATTTACCCTATATAATAATCTTTGAAGTTGTATGGAGCAAAACAAGTGCCA GAACAAGCTGCGTTGGGGAATGGCTATTTCCTTCAATTTTCTCTCATCCACCGCCGCCACCCTTTTTCTTTTTTTTTCTTTTTCCTCATCCCCTTCGTCATCACTGTTCTACACGGCAACGCGCAGAATCGCTCTACATATAAACATAAACACCTCCAACTCAAAATTCATCATTCAAATCAACATTCAATCCTTAAACCCAATTCCCAATTCTCCAAATTCCAAGAGATCATGGACAAATTCTCGTGCTACGACAGAGTATTCAACAGCATAGACACCGACTGCGACGGCAAGGTCTCCCCTCACGACCTGCTCAGCCGTTTCGCGGCGGTGACAGGGGAGGAGCTCACGGAGGCCGAGGCAGCGGAGGCTATGGCGGCCTACGATTCGGACGGCGACGGACTGCTGGAGATGGCGGAGTTCGGGAGGTTCGTGGAGGAGGGGGATGAACAGGGGAAGGAGATGAGAGAGGCTTTTGAGATGTATGAAATGGAGGGTTTGGGAGTGATTACGCCGGTGAGCCTCCGCCGGATGCTCAGCCGCCTTGGGGAATCGAGGACCGTCGGCGATTGCAAGAGAATGATCGCTAAATTTGATGTCAATGGCGATGGAGTTCTCTGTTTTGATGAGTTTAAAGTTATGATGTTGCTTTAATATTGTAAATGGTGTGTCAGTCTTCGTTTTTGATTCAGGGTTCGCTGTTGGGAAACACAAGCATTATATTGAAGTTTAGAAATTCTTTTTAGAACAGAAAATAGATTAGTTTGCACTTTGCATATATATGTTAGAAAATTATTTATTTTTTCTGTTGATTAAATTCAAATTGGGATGTGAGGACTTTTGAGGTATGGAATGTTTTGACTAATTAAATGATCTTTATGTTGAATTTCAGGTATTTACCCTATATAATAATCTTTGAAGTTGTATGGAGCAAAACAAGTGCCA ATGGACAAATTCTCGTGCTACGACAGAGTATTCAACAGCATAGACACCGACTGCGACGGCAAGGTCTCCCCTCACGACCTGCTCAGCCGTTTCGCGGCGGTGACAGGGGAGGAGCTCACGGAGGCCGAGGCAGCGGAGGCTATGGCGGCCTACGATTCGGACGGCGACGGACTGCTGGAGATGGCGGAGTTCGGGAGGTTCGTGGAGGAGGGGGATGAACAGGGGAAGGAGATGAGAGAGGCTTTTGAGATGTATGAAATGGAGGGTTTGGGAGTGATTACGCCGGTGAGCCTCCGCCGGATGCTCAGCCGCCTTGGGGAATCGAGGACCGTCGGCGATTGCAAGAGAATGATCGCTAAATTTGATGTCAATGGCGATGGAGTTCTCTGTTTTGATGAGTTTAAAGTTATGATGTTGCTTTAA MDKFSCYDRVFNSIDTDCDGKVSPHDLLSRFAAVTGEELTEAEAAEAMAAYDSDGDGLLEMAEFGRFVEEGDEQGKEMREAFEMYEMEGLGVITPVSLRRMLSRLGESRTVGDCKRMIAKFDVNGDGVLCFDEFKVMMLL Homology
BLAST of Tan0013383 vs. ExPASy Swiss-Prot
Match: Q8RYK0 (Probable calcium-binding protein CML31 OS=Oryza sativa subsp. japonica OX=39947 GN=CML31 PE=2 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 1.1e-29 Identity = 70/135 (51.85%), Postives = 91/135 (67.41%), Query Frame = 0
BLAST of Tan0013383 vs. ExPASy Swiss-Prot
Match: Q8RYJ9 (Putative calcium-binding protein CML23 OS=Oryza sativa subsp. japonica OX=39947 GN=CML23 PE=3 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 3.5e-28 Identity = 71/144 (49.31%), Postives = 89/144 (61.81%), Query Frame = 0
BLAST of Tan0013383 vs. ExPASy Swiss-Prot
Match: Q8RYJ8 (Putative calcium-binding protein CML19 OS=Oryza sativa subsp. japonica OX=39947 GN=CML19 PE=3 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 5.6e-26 Identity = 63/137 (45.99%), Postives = 93/137 (67.88%), Query Frame = 0
BLAST of Tan0013383 vs. ExPASy Swiss-Prot
Match: Q2QYW1 (Probable calcium-binding protein CML25/26 OS=Oryza sativa subsp. japonica OX=39947 GN=CML25 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 7.3e-26 Identity = 72/141 (51.06%), Postives = 90/141 (63.83%), Query Frame = 0
BLAST of Tan0013383 vs. ExPASy Swiss-Prot
Match: Q9SRE6 (Calcium-binding protein CML38 OS=Arabidopsis thaliana OX=3702 GN=CML38 PE=1 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 7.3e-26 Identity = 64/139 (46.04%), Postives = 92/139 (66.19%), Query Frame = 0
BLAST of Tan0013383 vs. NCBI nr
Match: XP_022989992.1 (putative calcium-binding protein CML19 [Cucurbita maxima]) HSP 1 Score: 223.8 bits (569), Expect = 9.4e-55 Identity = 112/140 (80.00%), Postives = 126/140 (90.00%), Query Frame = 0
BLAST of Tan0013383 vs. NCBI nr
Match: XP_022962715.1 (probable calcium-binding protein CML31 [Cucurbita moschata] >KAG6601838.1 putative calcium-binding protein CML31, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032546.1 putative calcium-binding protein CML31, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 216.5 bits (550), Expect = 1.5e-52 Identity = 109/140 (77.86%), Postives = 125/140 (89.29%), Query Frame = 0
BLAST of Tan0013383 vs. NCBI nr
Match: XP_023520938.1 (probable calcium-binding protein CML31 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 214.9 bits (546), Expect = 4.3e-52 Identity = 108/137 (78.83%), Postives = 123/137 (89.78%), Query Frame = 0
BLAST of Tan0013383 vs. NCBI nr
Match: XP_038875509.1 (putative calcium-binding protein CML23 [Benincasa hispida]) HSP 1 Score: 207.2 bits (526), Expect = 9.1e-50 Identity = 106/140 (75.71%), Postives = 123/140 (87.86%), Query Frame = 0
BLAST of Tan0013383 vs. NCBI nr
Match: XP_004150479.1 (probable calcium-binding protein CML31 [Cucumis sativus] >KGN51513.1 hypothetical protein Csa_008833 [Cucumis sativus]) HSP 1 Score: 203.8 bits (517), Expect = 1.0e-48 Identity = 108/145 (74.48%), Postives = 123/145 (84.83%), Query Frame = 0
BLAST of Tan0013383 vs. ExPASy TrEMBL
Match: A0A6J1JHC9 (putative calcium-binding protein CML19 OS=Cucurbita maxima OX=3661 GN=LOC111487021 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 4.5e-55 Identity = 112/140 (80.00%), Postives = 126/140 (90.00%), Query Frame = 0
BLAST of Tan0013383 vs. ExPASy TrEMBL
Match: A0A6J1HFW4 (probable calcium-binding protein CML31 OS=Cucurbita moschata OX=3662 GN=LOC111463121 PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 7.2e-53 Identity = 109/140 (77.86%), Postives = 125/140 (89.29%), Query Frame = 0
BLAST of Tan0013383 vs. ExPASy TrEMBL
Match: A0A0A0KPM3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571560 PE=4 SV=1) HSP 1 Score: 203.8 bits (517), Expect = 4.9e-49 Identity = 108/145 (74.48%), Postives = 123/145 (84.83%), Query Frame = 0
BLAST of Tan0013383 vs. ExPASy TrEMBL
Match: A0A5D3E2X7 (Putative calcium-binding protein CML31 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00150 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 1.8e-48 Identity = 106/144 (73.61%), Postives = 122/144 (84.72%), Query Frame = 0
BLAST of Tan0013383 vs. ExPASy TrEMBL
Match: A0A1S3AUA4 (probable calcium-binding protein CML31 OS=Cucumis melo OX=3656 GN=LOC103483041 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 1.8e-48 Identity = 106/144 (73.61%), Postives = 122/144 (84.72%), Query Frame = 0
BLAST of Tan0013383 vs. TAIR 10
Match: AT1G76650.1 (calmodulin-like 38 ) HSP 1 Score: 118.2 bits (295), Expect = 5.2e-27 Identity = 64/139 (46.04%), Postives = 92/139 (66.19%), Query Frame = 0
BLAST of Tan0013383 vs. TAIR 10
Match: AT1G76650.3 (calmodulin-like 38 ) HSP 1 Score: 118.2 bits (295), Expect = 5.2e-27 Identity = 64/139 (46.04%), Postives = 92/139 (66.19%), Query Frame = 0
BLAST of Tan0013383 vs. TAIR 10
Match: AT1G76640.1 (Calcium-binding EF-hand family protein ) HSP 1 Score: 107.1 bits (266), Expect = 1.2e-23 Identity = 60/136 (44.12%), Postives = 86/136 (63.24%), Query Frame = 0
BLAST of Tan0013383 vs. TAIR 10
Match: AT1G76650.2 (calmodulin-like 38 ) HSP 1 Score: 107.1 bits (266), Expect = 1.2e-23 Identity = 61/139 (43.88%), Postives = 86/139 (61.87%), Query Frame = 0
BLAST of Tan0013383 vs. TAIR 10
Match: AT5G42380.1 (calmodulin like 37 ) HSP 1 Score: 105.5 bits (262), Expect = 3.5e-23 Identity = 65/133 (48.87%), Postives = 82/133 (61.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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