
Tan0013263 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGTTAGCTTGTTGGCTGCTCAATACAAAAGCATGAAACTAACTGCTGAAGAAGAGATACCGGTTGATCTACGTCGTTTTGCCCAGAAACAGAAACAGAGGGGAGGTGATTTTAAATTGTGTCTGGTAGGTAAAGTTTTCTCACTCAAGTGAATTAATATTGATTCTTTTAAGAATGTTATGAAAAGTGTTTGGAGAGTACATAAGAATACATCTATTGATTGTATTGGAGAAAACCTATTTTTCTTTAAATTCAAATCGATTTTGGAAAAAAATAGAATTGTTTCGGATGGTCCTTGGTTCTTCAATGGAGCTATGATTCTTTTCCAGGAACCTAATGCCCTTGAACAACCTGAGAAATTAAATCTGAATCATTCTGATTTTTTGGTTCAACTCTATAATCTTCCCTTATTTTGTATGGATGAAGAAGTTCTTAAACTTATGGGGAGCTCGATAAGGGAGGTTTTAAGTGTGGATATACCACTCCATTGGGTGGAATCTGGGAAAAATTTTCTAGATTAAGAGTTAAGATTGATATTTCTAGACCATTACAGAGAGGGTTAATGATCAAAATCGATGACAGTGAGAAGGATAGATGGATTCCTTGCAGATATGAGAAGTTGCCTGAATTCTGCTTTGATTGTGGGAGGTTAGGGCATACTCAAAAGGAATGTGACCGTTGTTTGGAGGGAGAGGAGGGAGCTGCACTTTCTAAATATGGTCCCAACTTACGAACAGTGGAATTCAAAAAACTTTCTGATATCAAAGGGGGCCTTAGAAAAAGGGAGGATTCTGAATCTTTGAAAAAATCGAATACAAGCAGTGAAATAGTAAAGAATAGCTCCAACAACAGTGAAATTAGGGTTCAGGGGGAAAGAAGGTAATGGATATGGAAGTTGTCTTACAGAAGGAGGCTGAAAATATTAATGAAAAAAAGGAAGATTGTGAGTTCTTGTATGAATGAAGGGAGGAATGGAGATGATTATATGCCAATAGTTGAAACTAATACCTGTGTTGAAAAAGGGAAGAATGTAGAAACCATTAAGAATGTGGCTATGGAAGAAAATATGACTGATGTGGGGATAGAAGGAGGCGTTCGTTTAAAGGGATTTGATTTGAATTCCTTGGATGGAGAAGATATGATGTTGCAGGAGAATCTGGGCCTTAATCATGGGGATAGTTGCAAACCTTCACTTTCCAAAAAGAAAATATGGAGAAGAATGATTATTGATAAAGAGTCCTCACTTGCAAAATCTGGAGATTCTAGTAGAAGTAAGAGACCATTTGAAGTCGATTACCTGGAAGAACCTCACTTGAATGAGAATAAGAAAAAGATGAAGATTGGGGATGTAGATCTTGTTCCGTGTTCTTTATTGGTGAACCCTGATACTCAGGGTTGCCATTCATTATGA ATGGATGTTAGCTTGTTGGCTGCTCAATACAAAAGCATGAAACTAACTGCTGAAGAAGAGATACCGGTTGATCTACGTCGTTTTGCCCAGAAACAGAAACAGAGGGGAGGTGATTTTAAATTGTGTCTGAGAGGGTTAATGATCAAAATCGATGACAGTGAGAAGGATAGATGGATTCCTTGCAGATATGAGAAGTTGCCTGAATTCTGCTTTGATTGTGGGAGGTTAGGGCATACTCAAAAGGAATGTGACCGTTGTTTGGAGGGAGAGGAGGGAGCTGCACTTTCTAAATATGGTCCCAACTTACGAACAGTGGAATTCAAAAAACTTTCTGATATCAAAGGGGGCCTTAGAAAAAGGGAGGATTCTGAATCTTTGAAAAAATCGAATACAAGCAGTGAAATAGTAAAGAATAGCTCCAACAACAGTGAAATTAGGGTTCAGGGGGAAAGAAGGAAGATTGTGAGTTCTTGTATGAATGAAGGGAGGAATGGAGATGATTATATGCCAATAGTTGAAACTAATACCTGTGTTGAAAAAGGGAAGAATGTAGAAACCATTAAGAATGTGGCTATGGAAGAAAATATGACTGATGTGGGGATAGAAGGAGGCGTTCGTTTAAAGGGATTTGATTTGAATTCCTTGGATGGAGAAGATATGATGTTGCAGGAGAATCTGGGCCTTAATCATGGGGATAGTTGCAAACCTTCACTTTCCAAAAAGAAAATATGGAGAAGAATGATTATTGATAAAGAGTCCTCACTTGCAAAATCTGGAGATTCTAGTAGAAGTAAGAGACCATTTGAAGTCGATTACCTGGAAGAACCTCACTTGAATGAGAATAAGAAAAAGATGAAGATTGGGGATGTAGATCTTGTTCCGTGTTCTTTATTGGTGAACCCTGATACTCAGGGTTGCCATTCATTATGA ATGGATGTTAGCTTGTTGGCTGCTCAATACAAAAGCATGAAACTAACTGCTGAAGAAGAGATACCGGTTGATCTACGTCGTTTTGCCCAGAAACAGAAACAGAGGGGAGGTGATTTTAAATTGTGTCTGAGAGGGTTAATGATCAAAATCGATGACAGTGAGAAGGATAGATGGATTCCTTGCAGATATGAGAAGTTGCCTGAATTCTGCTTTGATTGTGGGAGGTTAGGGCATACTCAAAAGGAATGTGACCGTTGTTTGGAGGGAGAGGAGGGAGCTGCACTTTCTAAATATGGTCCCAACTTACGAACAGTGGAATTCAAAAAACTTTCTGATATCAAAGGGGGCCTTAGAAAAAGGGAGGATTCTGAATCTTTGAAAAAATCGAATACAAGCAGTGAAATAGTAAAGAATAGCTCCAACAACAGTGAAATTAGGGTTCAGGGGGAAAGAAGGAAGATTGTGAGTTCTTGTATGAATGAAGGGAGGAATGGAGATGATTATATGCCAATAGTTGAAACTAATACCTGTGTTGAAAAAGGGAAGAATGTAGAAACCATTAAGAATGTGGCTATGGAAGAAAATATGACTGATGTGGGGATAGAAGGAGGCGTTCGTTTAAAGGGATTTGATTTGAATTCCTTGGATGGAGAAGATATGATGTTGCAGGAGAATCTGGGCCTTAATCATGGGGATAGTTGCAAACCTTCACTTTCCAAAAAGAAAATATGGAGAAGAATGATTATTGATAAAGAGTCCTCACTTGCAAAATCTGGAGATTCTAGTAGAAGTAAGAGACCATTTGAAGTCGATTACCTGGAAGAACCTCACTTGAATGAGAATAAGAAAAAGATGAAGATTGGGGATGTAGATCTTGTTCCGTGTTCTTTATTGGTGAACCCTGATACTCAGGGTTGCCATTCATTATGA MDVSLLAAQYKSMKLTAEEEIPVDLRRFAQKQKQRGGDFKLCLRGLMIKIDDSEKDRWIPCRYEKLPEFCFDCGRLGHTQKECDRCLEGEEGAALSKYGPNLRTVEFKKLSDIKGGLRKREDSESLKKSNTSSEIVKNSSNNSEIRVQGERRKIVSSCMNEGRNGDDYMPIVETNTCVEKGKNVETIKNVAMEENMTDVGIEGGVRLKGFDLNSLDGEDMMLQENLGLNHGDSCKPSLSKKKIWRRMIIDKESSLAKSGDSSRSKRPFEVDYLEEPHLNENKKKMKIGDVDLVPCSLLVNPDTQGCHSL Homology
BLAST of Tan0013263 vs. NCBI nr
Match: OQU92454.1 (hypothetical protein SORBI_3001G347001 [Sorghum bicolor]) HSP 1 Score: 70.1 bits (170), Expect = 3.8e-08 Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 0
BLAST of Tan0013263 vs. NCBI nr
Match: KAG0550818.1 (hypothetical protein BDA96_01G370300 [Sorghum bicolor]) HSP 1 Score: 68.9 bits (167), Expect = 8.5e-08 Identity = 27/53 (50.94%), Postives = 36/53 (67.92%), Query Frame = 0
BLAST of Tan0013263 vs. NCBI nr
Match: KAG5548220.1 (hypothetical protein RHGRI_013801 [Rhododendron griersonianum]) HSP 1 Score: 65.9 bits (159), Expect = 7.2e-07 Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 0
BLAST of Tan0013263 vs. NCBI nr
Match: KAF7147901.1 (hypothetical protein RHSIM_Rhsim03G0083400 [Rhododendron simsii]) HSP 1 Score: 65.5 bits (158), Expect = 9.4e-07 Identity = 37/105 (35.24%), Postives = 58/105 (55.24%), Query Frame = 0
BLAST of Tan0013263 vs. NCBI nr
Match: TXG65036.1 (hypothetical protein EZV62_012030 [Acer yangbiense]) HSP 1 Score: 65.5 bits (158), Expect = 9.4e-07 Identity = 46/116 (39.66%), Postives = 62/116 (53.45%), Query Frame = 0
BLAST of Tan0013263 vs. ExPASy TrEMBL
Match: A0A1Z5S941 (CCHC-type domain-containing protein OS=Sorghum bicolor OX=4558 GN=SORBI_3001G347001 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.8e-08 Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 0
BLAST of Tan0013263 vs. ExPASy TrEMBL
Match: A0A803QJP0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 2.0e-07 Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0
BLAST of Tan0013263 vs. ExPASy TrEMBL
Match: A0A5C7I9I6 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_012030 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 4.6e-07 Identity = 46/116 (39.66%), Postives = 62/116 (53.45%), Query Frame = 0
BLAST of Tan0013263 vs. ExPASy TrEMBL
Match: A0A803P8K3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 5.9e-07 Identity = 30/67 (44.78%), Postives = 43/67 (64.18%), Query Frame = 0
BLAST of Tan0013263 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.0e-06 Identity = 28/66 (42.42%), Postives = 42/66 (63.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|