Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATTGGTGTGACGAAATGACCCCTCCCAGTCCCAGTTCACCTTTTCTTAATAACCACTCTTCCTTGAGTCTCATAATTGTGTTATATTTAGCAGAGCATTCAATTAGAAAACACGTTCATAATTAAGACTCAGACTCAGGTAGAATATATGAAGAAGGAGTCAGTGAGCAACACGGTGAAGAATATGATGATTGCGTTGAGAGGCATGGTGAAAAGAAAAGGCCGCGCCCTCAAAGCCCGTCTCATAATATACTCATTGCTGGCTCAAACCAACTTCCTCGTCTCTTCAATCCCTTTAACAACAGTCACCCATCACCACCAAAATCACTGCCAATTACAACCACTAGAAGTAGAAGAAGCAGAAGCAGAAGCAGAAGCAGAAGCAAAAGCAGATTTGGGTATTCGAATACCTACAAGTACTGGTGGGTCGGTGATTGAGATGGTGAAGAATTCGAAAGAGGAGGCAGGCGAGGAGTTCAATCTTGAAAAGGACATTGACGATGTGGCTGATTTGTTCATCAAAAATTTCCATCGCCAGATCAGGATGCAGAAGCAAGAGATCGCTATCCTTTGAGTTTGATTCTGAATTTCCATCTACACTACTTCAATAAACTTTTGCGTTTTCCTAATTTCGCCTATCAAACTTATATTATTCAATTCATATTTTTACATTATTATTTC
mRNA sequence
GATTGGTGTGACGAAATGACCCCTCCCAGTCCCAGTTCACCTTTTCTTAATAACCACTCTTCCTTGAGTCTCATAATTGTGTTATATTTAGCAGAGCATTCAATTAGAAAACACGTTCATAATTAAGACTCAGACTCAGGTAGAATATATGAAGAAGGAGTCAGTGAGCAACACGGTGAAGAATATGATGATTGCGTTGAGAGGCATGGTGAAAAGAAAAGGCCGCGCCCTCAAAGCCCGTCTCATAATATACTCATTGCTGGCTCAAACCAACTTCCTCGTCTCTTCAATCCCTTTAACAACAGTCACCCATCACCACCAAAATCACTGCCAATTACAACCACTAGAAGTAGAAGAAGCAGAAGCAGAAGCAGAAGCAGAAGCAAAAGCAGATTTGGGTATTCGAATACCTACAAGTACTGGTGGGTCGGTGATTGAGATGGTGAAGAATTCGAAAGAGGAGGCAGGCGAGGAGTTCAATCTTGAAAAGGACATTGACGATGTGGCTGATTTGTTCATCAAAAATTTCCATCGCCAGATCAGGATGCAGAAGCAAGAGATCGCTATCCTTTGAGTTTGATTCTGAATTTCCATCTACACTACTTCAATAAACTTTTGCGTTTTCCTAATTTCGCCTATCAAACTTATATTATTCAATTCATATTTTTACATTATTATTTC
Coding sequence (CDS)
ATGAAGAAGGAGTCAGTGAGCAACACGGTGAAGAATATGATGATTGCGTTGAGAGGCATGGTGAAAAGAAAAGGCCGCGCCCTCAAAGCCCGTCTCATAATATACTCATTGCTGGCTCAAACCAACTTCCTCGTCTCTTCAATCCCTTTAACAACAGTCACCCATCACCACCAAAATCACTGCCAATTACAACCACTAGAAGTAGAAGAAGCAGAAGCAGAAGCAGAAGCAGAAGCAAAAGCAGATTTGGGTATTCGAATACCTACAAGTACTGGTGGGTCGGTGATTGAGATGGTGAAGAATTCGAAAGAGGAGGCAGGCGAGGAGTTCAATCTTGAAAAGGACATTGACGATGTGGCTGATTTGTTCATCAAAAATTTCCATCGCCAGATCAGGATGCAGAAGCAAGAGATCGCTATCCTTTGA
Protein sequence
MKKESVSNTVKNMMIALRGMVKRKGRALKARLIIYSLLAQTNFLVSSIPLTTVTHHHQNHCQLQPLEVEEAEAEAEAEAKADLGIRIPTSTGGSVIEMVKNSKEEAGEEFNLEKDIDDVADLFIKNFHRQIRMQKQEIAIL
Homology
BLAST of Tan0013245 vs. NCBI nr
Match:
XP_038904099.1 (uncharacterized protein LOC120090474 [Benincasa hispida])
HSP 1 Score: 166.0 bits (419), Expect = 2.3e-37
Identity = 99/150 (66.00%), Postives = 113/150 (75.33%), Query Frame = 0
Query: 1 MKKESVSNTVKNMMIALRGMVKRKGRALKARLIIYSLLAQTNFLVSSIPLTTV-THHH-Q 60
MKKESVSN VK M ALR MVKRK RALKARLI+YSLLAQ+NFLVSSIPLTT+ THHH Q
Sbjct: 1 MKKESVSNMVKQMGSALRSMVKRKARALKARLIVYSLLAQSNFLVSSIPLTTISTHHHQQ 60
Query: 61 NHCQLQPLE------------VEEAEAEAEAEAKADLGIRIPTSTGGSVIEMVKNSKEEA 120
H QLQ ++ ++ EAEAEAEA A+ GSVIEMVK+SKE+A
Sbjct: 61 QHSQLQAVQDQVAETEQETGVCQQYEAEAEAEADAEAEAEAEAEASGSVIEMVKHSKEKA 120
Query: 121 GEEFNLEKDIDDVADLFIKNFHRQIRMQKQ 137
GEEF+LEKDID VADLFI+NFH+Q+RMQKQ
Sbjct: 121 GEEFSLEKDIDHVADLFIRNFHQQMRMQKQ 150
BLAST of Tan0013245 vs. NCBI nr
Match:
XP_023531487.1 (uncharacterized protein LOC111793710 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 158.7 bits (400), Expect = 3.7e-35
Identity = 100/171 (58.48%), Postives = 111/171 (64.91%), Query Frame = 0
Query: 1 MKKESVSNTVKNMMIALRGMVKRKGRALKARLIIYSLLAQTNFLVSSIPLTTVTHHHQNH 60
MKKES+SN VK M LR MVKRK RALKARLIIYSLLAQ+NFLVSSIPL+TVT H QN
Sbjct: 1 MKKESLSNMVKQMACGLRAMVKRKARALKARLIIYSLLAQSNFLVSSIPLSTVT-HQQNQ 60
Query: 61 CQLQPLEVEEAE-----------AEAEAEAKADLGIRIPTSTGG---------------- 120
CQ+Q E+E+A+ AE AE A+ G TG
Sbjct: 61 CQIQAAELEQAQEHQGVVEQETGAETGAETGAETGAETGEETGAETGEETGEWAELETEA 120
Query: 121 --------SVIEMVKNSKEEAGEEFNLEKDIDDVADLFIKNFHRQIRMQKQ 137
SVIEMVKNSKEEAGEEF+LEKDIDDVADLFI+NFH Q+RMQKQ
Sbjct: 121 AVGRTNGWSVIEMVKNSKEEAGEEFSLEKDIDDVADLFIRNFHSQMRMQKQ 170
BLAST of Tan0013245 vs. NCBI nr
Match:
KAG6588850.1 (hypothetical protein SDJN03_17415, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 157.9 bits (398), Expect = 6.4e-35
Identity = 99/167 (59.28%), Postives = 110/167 (65.87%), Query Frame = 0
Query: 1 MKKESVSNTVKNMMIALRGMVKRKGRALKARLIIYSLLAQTNFLVSSIPLTTVTHHHQNH 60
MKKES+SN VK M LR MVKRK RALKARLIIYSLLAQ+NFLVSSIPL+TVT H QN
Sbjct: 1 MKKESLSNMVKQMACGLRAMVKRKARALKARLIIYSLLAQSNFLVSSIPLSTVT-HQQNQ 60
Query: 61 CQLQPLEVEEAE---------------AEAEAEAKADLGIRIPTST-------------- 120
CQ+Q E+E+A+ AE AE + G T
Sbjct: 61 CQIQAAELEQAQEHQGVVEKETGEETGAETGAETGEETGAETGAETGEWAELETEAAVGR 120
Query: 121 --GGSVIEMVKNSKEEAGEEFNLEKDIDDVADLFIKNFHRQIRMQKQ 137
G SVIEMVKNSKEEAGEEF+LEKDIDDVADLFI+NFH Q+RMQKQ
Sbjct: 121 TNGWSVIEMVKNSKEEAGEEFSLEKDIDDVADLFIRNFHSQMRMQKQ 166
BLAST of Tan0013245 vs. NCBI nr
Match:
XP_022928439.1 (uncharacterized protein LOC111435250 [Cucurbita moschata])
HSP 1 Score: 157.5 bits (397), Expect = 8.3e-35
Identity = 98/163 (60.12%), Postives = 109/163 (66.87%), Query Frame = 0
Query: 1 MKKESVSNTVKNMMIALRGMVKRKGRALKARLIIYSLLAQTNFLVSSIPLTTVTHHHQNH 60
MKKES+SN VK M LR MVKRK RALKARLIIYSLLAQ+NFLVSSIPL+TVT H QN
Sbjct: 1 MKKESLSNMVKQMACGLRAMVKRKARALKARLIIYSLLAQSNFLVSSIPLSTVT-HQQNQ 60
Query: 61 CQLQPLEVEEA-------EAEAEAEAKADLGIRIPTSTGG-------------------- 120
CQ+Q ++E+A E E AE + G TG
Sbjct: 61 CQIQAADLEKAQEHQGVVEEETGAETGEETGAETGEETGAETGEWAELETEAAVGRTNGW 120
Query: 121 SVIEMVKNSKEEAGEEFNLEKDIDDVADLFIKNFHRQIRMQKQ 137
SVIEMVKNSKEEAGEEF+LEKDIDDVADLFI+NFH Q+RMQKQ
Sbjct: 121 SVIEMVKNSKEEAGEEFSLEKDIDDVADLFIRNFHSQMRMQKQ 162
BLAST of Tan0013245 vs. NCBI nr
Match:
XP_022989728.1 (uncharacterized protein LOC111486727 [Cucurbita maxima])
HSP 1 Score: 157.1 bits (396), Expect = 1.1e-34
Identity = 98/167 (58.68%), Postives = 111/167 (66.47%), Query Frame = 0
Query: 1 MKKESVSNTVKNMMIALRGMVKRKGRALKARLIIYSLLAQTNFLVSSIPLTTVTHHHQNH 60
MKKES+SN VK M LR MVKRK RALKARLIIYSLLAQ+NFLVSSIPL+TV H QN
Sbjct: 1 MKKESLSNMVKQMACGLRAMVKRKARALKARLIIYSLLAQSNFLVSSIPLSTVI-HQQNQ 60
Query: 61 CQLQPLEVEEAE-------------------AEAEAEAKADLGIR------------IPT 120
CQ+Q E+EEA+ AE AE + G + +
Sbjct: 61 CQIQAAELEEAQEHQGVVEEETGAETGEETGAETGAETGEETGAKTGEWAELETEAAVGR 120
Query: 121 STGGSVIEMVKNSKEEAGEEFNLEKDIDDVADLFIKNFHRQIRMQKQ 137
+ G SVIEMVKNSKEEAGEEF+LEKDIDDVADLFI+NFH Q+RMQKQ
Sbjct: 121 TNGWSVIEMVKNSKEEAGEEFSLEKDIDDVADLFIRNFHSQMRMQKQ 166
BLAST of Tan0013245 vs. ExPASy TrEMBL
Match:
A0A6J1EKV0 (uncharacterized protein LOC111435250 OS=Cucurbita moschata OX=3662 GN=LOC111435250 PE=4 SV=1)
HSP 1 Score: 157.5 bits (397), Expect = 4.0e-35
Identity = 98/163 (60.12%), Postives = 109/163 (66.87%), Query Frame = 0
Query: 1 MKKESVSNTVKNMMIALRGMVKRKGRALKARLIIYSLLAQTNFLVSSIPLTTVTHHHQNH 60
MKKES+SN VK M LR MVKRK RALKARLIIYSLLAQ+NFLVSSIPL+TVT H QN
Sbjct: 1 MKKESLSNMVKQMACGLRAMVKRKARALKARLIIYSLLAQSNFLVSSIPLSTVT-HQQNQ 60
Query: 61 CQLQPLEVEEA-------EAEAEAEAKADLGIRIPTSTGG-------------------- 120
CQ+Q ++E+A E E AE + G TG
Sbjct: 61 CQIQAADLEKAQEHQGVVEEETGAETGEETGAETGEETGAETGEWAELETEAAVGRTNGW 120
Query: 121 SVIEMVKNSKEEAGEEFNLEKDIDDVADLFIKNFHRQIRMQKQ 137
SVIEMVKNSKEEAGEEF+LEKDIDDVADLFI+NFH Q+RMQKQ
Sbjct: 121 SVIEMVKNSKEEAGEEFSLEKDIDDVADLFIRNFHSQMRMQKQ 162
BLAST of Tan0013245 vs. ExPASy TrEMBL
Match:
A0A6J1JR68 (uncharacterized protein LOC111486727 OS=Cucurbita maxima OX=3661 GN=LOC111486727 PE=4 SV=1)
HSP 1 Score: 157.1 bits (396), Expect = 5.2e-35
Identity = 98/167 (58.68%), Postives = 111/167 (66.47%), Query Frame = 0
Query: 1 MKKESVSNTVKNMMIALRGMVKRKGRALKARLIIYSLLAQTNFLVSSIPLTTVTHHHQNH 60
MKKES+SN VK M LR MVKRK RALKARLIIYSLLAQ+NFLVSSIPL+TV H QN
Sbjct: 1 MKKESLSNMVKQMACGLRAMVKRKARALKARLIIYSLLAQSNFLVSSIPLSTVI-HQQNQ 60
Query: 61 CQLQPLEVEEAE-------------------AEAEAEAKADLGIR------------IPT 120
CQ+Q E+EEA+ AE AE + G + +
Sbjct: 61 CQIQAAELEEAQEHQGVVEEETGAETGEETGAETGAETGEETGAKTGEWAELETEAAVGR 120
Query: 121 STGGSVIEMVKNSKEEAGEEFNLEKDIDDVADLFIKNFHRQIRMQKQ 137
+ G SVIEMVKNSKEEAGEEF+LEKDIDDVADLFI+NFH Q+RMQKQ
Sbjct: 121 TNGWSVIEMVKNSKEEAGEEFSLEKDIDDVADLFIRNFHSQMRMQKQ 166
BLAST of Tan0013245 vs. ExPASy TrEMBL
Match:
A0A0A0LCA7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G252450 PE=4 SV=1)
HSP 1 Score: 153.3 bits (386), Expect = 7.6e-34
Identity = 92/148 (62.16%), Postives = 108/148 (72.97%), Query Frame = 0
Query: 1 MKKESVSNTVKNMMIALRGMVKRKGRALKARLIIYSLLAQTNFLV-SSIPLTTVT--HHH 60
MK+ESVSN VK M ALR MVKRK RALKARLIIYSLLAQ+NF V SSIPLTT++ HH+
Sbjct: 1 MKEESVSNMVKQMGNALRSMVKRKARALKARLIIYSLLAQSNFFVSSSIPLTTISTHHHN 60
Query: 61 QNHCQLQPLEVEEAEAEAEAEAKADLGI---------RIPTSTGGSVIEMVKNSKEEAGE 120
Q H QLQ + + AE + E + + G+ GSVIEMVKNSKE+AGE
Sbjct: 61 QQHSQLQAVVEDHQVAETQQETERETGVCTKYEEAEAEAEAPASGSVIEMVKNSKEKAGE 120
Query: 121 EFNLEKDIDDVADLFIKNFHRQIRMQKQ 137
EF+LEKDID VADLFI+NFH+Q+RMQKQ
Sbjct: 121 EFSLEKDIDHVADLFIRNFHQQMRMQKQ 148
BLAST of Tan0013245 vs. ExPASy TrEMBL
Match:
A0A1S3BPP6 (uncharacterized protein LOC103491856 OS=Cucumis melo OX=3656 GN=LOC103491856 PE=4 SV=1)
HSP 1 Score: 153.3 bits (386), Expect = 7.6e-34
Identity = 98/156 (62.82%), Postives = 110/156 (70.51%), Query Frame = 0
Query: 1 MKKESVSNTVKNMMIALRGMVKRKGRALKARLIIYSLLAQTNFLV-SSIPLTTVT--HHH 60
MKKESVSN VK M AL +VKRK RALKARLI+YSLLAQ+NF V SSIPLTT++ HH+
Sbjct: 1 MKKESVSNMVKQMGNALTSLVKRKARALKARLIVYSLLAQSNFFVSSSIPLTTISTHHHN 60
Query: 61 QNHCQLQPL-----------------EVEEAEAEAEAEAKADLGIRIPTSTGGSVIEMVK 120
Q H QLQ + + EEAEAEAEAEA GSVIEMVK
Sbjct: 61 QQHSQLQAVVEDHQVAETEQETGVFTKYEEAEAEAEAEA------------SGSVIEMVK 120
Query: 121 NSKEEAGEEFNLEKDIDDVADLFIKNFHRQIRMQKQ 137
NSKE+AGEEF+LEKDID VADLFI+NFHRQ+RMQKQ
Sbjct: 121 NSKEKAGEEFSLEKDIDHVADLFIRNFHRQMRMQKQ 144
BLAST of Tan0013245 vs. ExPASy TrEMBL
Match:
A0A6J1D3E1 (uncharacterized protein LOC111016945 OS=Momordica charantia OX=3673 GN=LOC111016945 PE=4 SV=1)
HSP 1 Score: 145.6 bits (366), Expect = 1.6e-31
Identity = 93/156 (59.62%), Postives = 107/156 (68.59%), Query Frame = 0
Query: 1 MKKESVSNTVKNMMIALRGMVKRKGRALKARLIIYSLLAQTNFLVSSI-----PLTTVTH 60
MKKES +K M+ AL MVKRK RALKARLII+SLL+ TNFLVSSI PLT+ TH
Sbjct: 1 MKKESARGVLKQMLSALSAMVKRKSRALKARLIIHSLLSNTNFLVSSISHKLHPLTS-TH 60
Query: 61 HHQNHCQLQPLEVEEAEAEAEAEAKADLGIRIPTS---------------TGGSVIEMVK 120
H H +LQP +EEAEAE E A+ +R+ S GGSVIEMVK
Sbjct: 61 QHDQHRELQP-PMEEAEAEVEVGAEQSPDVRLRQSLVESAFDEDQGGGSGVGGSVIEMVK 120
Query: 121 NSKEEAGEEFNLEKDIDDVADLFIKNFHRQIRMQKQ 137
+SKEEAGEEF LE+DID VADLFI+NFHRQ+RMQKQ
Sbjct: 121 HSKEEAGEEFCLEQDIDHVADLFIRNFHRQMRMQKQ 154
BLAST of Tan0013245 vs. TAIR 10
Match:
AT5G13880.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47920.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )
HSP 1 Score: 72.4 bits (176), Expect = 3.3e-13
Identity = 60/151 (39.74%), Postives = 74/151 (49.01%), Query Frame = 0
Query: 21 VKRKGRALKARLIIYSLLAQTNFLVSSIP------LTTVTHHHQN--------------- 80
+KRK RA K RL+I+SLL + +V S+ T+ H N
Sbjct: 26 LKRKTRAFKTRLVIFSLLHNRHMVVGSLSHKLKSNQTSKKIDHDNKDVQDYHDKNMVVVY 85
Query: 81 --------------HCQLQPLEVEEAEAEAEAEAKADLGIRIPTSTGGSVIEMVKNSKEE 137
H Q Q E EE + E E E DL + GSVIEMVK+SKE+
Sbjct: 86 SQNVNAMSSTPVSPHVQYQYTE-EEDDEEGEEEKYPDLRHSL-FEAEGSVIEMVKHSKED 145
BLAST of Tan0013245 vs. TAIR 10
Match:
AT5G47920.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 60.8 bits (146), Expect = 9.8e-10
Identity = 34/85 (40.00%), Postives = 47/85 (55.29%), Query Frame = 0
Query: 51 TTVTHHHQNHCQLQPLEVEEAEAEAEAEAKADLGIRIPTSTGGSVIEMVKNSKEEAGEEF 110
+T+ HH + + + E + D G G SVI+MV+ SKEE GE F
Sbjct: 88 STMAHHEEYDVHEEESDKYPDLRHTLFEGEEDFGDLEEEGQGSSVIDMVRTSKEEEGENF 147
Query: 111 NLEKDIDDVADLFIKNFHRQIRMQK 136
LE +ID VADLFI FH+Q+++QK
Sbjct: 148 KLEDEIDHVADLFISRFHKQMKLQK 172
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_038904099.1 | 2.3e-37 | 66.00 | uncharacterized protein LOC120090474 [Benincasa hispida] | [more] |
XP_023531487.1 | 3.7e-35 | 58.48 | uncharacterized protein LOC111793710 [Cucurbita pepo subsp. pepo] | [more] |
KAG6588850.1 | 6.4e-35 | 59.28 | hypothetical protein SDJN03_17415, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_022928439.1 | 8.3e-35 | 60.12 | uncharacterized protein LOC111435250 [Cucurbita moschata] | [more] |
XP_022989728.1 | 1.1e-34 | 58.68 | uncharacterized protein LOC111486727 [Cucurbita maxima] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1EKV0 | 4.0e-35 | 60.12 | uncharacterized protein LOC111435250 OS=Cucurbita moschata OX=3662 GN=LOC1114352... | [more] |
A0A6J1JR68 | 5.2e-35 | 58.68 | uncharacterized protein LOC111486727 OS=Cucurbita maxima OX=3661 GN=LOC111486727... | [more] |
A0A0A0LCA7 | 7.6e-34 | 62.16 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G252450 PE=4 SV=1 | [more] |
A0A1S3BPP6 | 7.6e-34 | 62.82 | uncharacterized protein LOC103491856 OS=Cucumis melo OX=3656 GN=LOC103491856 PE=... | [more] |
A0A6J1D3E1 | 1.6e-31 | 59.62 | uncharacterized protein LOC111016945 OS=Momordica charantia OX=3673 GN=LOC111016... | [more] |
Match Name | E-value | Identity | Description | |
AT5G13880.1 | 3.3e-13 | 39.74 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |
AT5G47920.1 | 9.8e-10 | 40.00 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... | [more] |