Tan0013169 (gene) Snake gourd v1

Overview


Name	Tan0013169
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	40S ribosomal protein S15a
Location	LG11: 6403569 .. 6406091 (+)
RNA-Seq Expression	Tan0013169
Synteny	Tan0013169

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTCTCTTCGCTAGAACCCTGGAAAAAAGCCCTAGTTCCCGCCCCTGCTCGTCAAACTTCTCGAAGTTGCCTCTGCAATTGCCGTAAGTATTTAGGGTTTTGTTGTATCCCATTGTATTTCTTATACGCGCTAAAATTGATCTGCTTGTCCTTTTTTCGCGTTAATCGGTAGGACACTGATCGGGTAAATGTTTTGTTTTTCGTGATTCATACGTTAGAGAGTGGGAACTTCTTGTTCTTCTATGATTCAACGTCTGTGAGTTTATGACTGTTCGATAGATAACTGAGGAAGATCTCGTTATATTTTACTATTGTTTCCGGGGTACAGTCTAGCTAACACGCATTTCTCCGCTCTCTACTGATGAAAGGGTTGCTTGTATGCTTGTCGATTGATTTTATATCCTATTTTTGGTTTATTTAATGATACGTAATAAAATTATAGGAATTATAGGGCTACTAATTGGAAATCATGTATGTGTTCTTCGGGTCTAAGAGTGGCAGCTGGTTGCTTGTTAAGGACGATCAAGTGTTTTTATAGTCATTCTTCTGAATTTTGCGGCATTTTTAACTTTAACTTTGGGTATTTAAATATTTTTGCAGTAAACATGGTGCGTGTGAGTGTTCTGAATGATGCTCTTAAAAGCATGTATAATGCTGAGAAACGTGGGAAGCGCCAGGTCATGATAAGGCCATCTTCCAAAGTTATTATCAAGTTTCTTCTTGTTATGCAGAAGCATGGTAATTGCCAATAAATTCACTCCTTTCTCTTTTCTTTGCACCTTAAACATGTACGAATTTACTTTGTTCAAAATTTCATTGTTTTAGGATACATTGGTGAGTTTGAGTACGTTGACGATCATAGGGCAGGGAAAATTGTTGTTGAATTGAATGGGAGACTCAACAAATGTGGTGTTATCAGTCCCCGTTTTGATGTTGGTGTCAAGGAGATTGAAGGTTGGACTGCAAGGTTGTTACCCTCAAGACAGGTATTTTACTTTCTTACTTGGAGACAGCGTATTTAGTTAGTGTTATGCTCAAGATTTATTAGTTTTTGCCTAATCCAAACTTTTATAACTTTTATATTTGAATGTTTACAGTTTGGATACATTGTGTTGACAACATCTGCCGGAATCATGGACCATGAAGAGGCCAGAAGAAAGAACGTTGGTGGTAAAGTGCTTGGTTTCTTCTACTAAGCAATGTTGCCAGCGTTTTTTTTTAATCTTTTTGGTATTTTATGCACTTTTGAACTTTAATGCGAAGCCGTAGAGAGTCCTGTTTTGTTTTAGTTGCCGTTTTGGTTGGGAGGATACAGGATACGACCTGCATTCTTTTTGAAGACGCTGATATTGTCTAATGAGCCTTTTTTTTAATCTATGAGTTCTATTTGTTTGCCCCATACTGAAACTGAAATTGTTGTAGTTGTCAAGCTTCAGAATTGATTGCAGTTTTCTCAGACCACAATGATCTTCTTCCCACCA

mRNA sequence

CTTCTCTCTTCGCTAGAACCCTGGAAAAAAGCCCTAGTTCCCGCCCCTGCTCGTCAAACTTCTCGAAGTTGCCTCTGCAATTGCCTAAACATGGTGCGTGTGAGTGTTCTGAATGATGCTCTTAAAAGCATGTATAATGCTGAGAAACGTGGGAAGCGCCAGGTCATGATAAGGCCATCTTCCAAAGTTATTATCAAGTTTCTTCTTGTTATGCAGAAGCATGGATACATTGGTGAGTTTGAGTACGTTGACGATCATAGGGCAGGGAAAATTGTTGTTGAATTGAATGGGAGACTCAACAAATGTGGTGTTATCAGTCCCCGTTTTGATGTTGGTGTCAAGGAGATTGAAGGTTGGACTGCAAGGTTGTTACCCTCAAGACAGTTTGGATACATTGTGTTGACAACATCTGCCGGAATCATGGACCATGAAGAGGCCAGAAGAAAGAACGTTGGTGGTAAAGTGCTTGGTTTCTTCTACTAAGCAATGTTGCCAGCGTTTTTTTTTAATCTTTTTGGTATTTTATGCACTTTTGAACTTTAATGCGAAGCCGTAGAGAGTCCTGTTTTGTTTTAGTTGCCGTTTTGGTTGGGAGGATACAGGATACGACCTGCATTCTTTTTGAAGACGCTGATATTGTCTAATGAGCCTTTTTTTTAATCTATGAGTTCTATTTGTTTGCCCCATACTGAAACTGAAATTGTTGTAGTTGTCAAGCTTCAGAATTGATTGCAGTTTTCTCAGACCACAATGATCTTCTTCCCACCA

Coding sequence (CDS)

ATGGTGCGTGTGAGTGTTCTGAATGATGCTCTTAAAAGCATGTATAATGCTGAGAAACGTGGGAAGCGCCAGGTCATGATAAGGCCATCTTCCAAAGTTATTATCAAGTTTCTTCTTGTTATGCAGAAGCATGGATACATTGGTGAGTTTGAGTACGTTGACGATCATAGGGCAGGGAAAATTGTTGTTGAATTGAATGGGAGACTCAACAAATGTGGTGTTATCAGTCCCCGTTTTGATGTTGGTGTCAAGGAGATTGAAGGTTGGACTGCAAGGTTGTTACCCTCAAGACAGTTTGGATACATTGTGTTGACAACATCTGCCGGAATCATGGACCATGAAGAGGCCAGAAGAAAGAACGTTGGTGGTAAAGTGCTTGGTTTCTTCTACTAA

Protein sequence

MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKVLGFFY

Homology

[Close]

BLAST of Tan0013169 vs. ExPASy Swiss-Prot
Match: P42798 (40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=2)

HSP 1 Score: 249.2 bits (635), Expect = 3.6e-65
Identity = 121/127 (95.28%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 45  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGK 104
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHR+GK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 105 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 164
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 165 VGGLAQG 172
           VGG   G
Sbjct: 121 VGGKVLG 127

[Close]

BLAST of Tan0013169 vs. ExPASy Swiss-Prot
Match: Q00332 (40S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 247.7 bits (631), Expect = 1.1e-64
Identity = 120/127 (94.49%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 45  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGK 104
           MVR+SVLNDALKSM+NAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHR+GK
Sbjct: 1   MVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 105 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 164
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 165 VGGLAQG 172
           VGG   G
Sbjct: 121 VGGKVLG 127

[Close]

BLAST of Tan0013169 vs. ExPASy Swiss-Prot
Match: Q9LX88 (40S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=3)

HSP 1 Score: 246.1 bits (627), Expect = 3.1e-64
Identity = 119/127 (93.70%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 45  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGK 104
           MVR+SVLND LKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHR+GK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 105 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 164
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 165 VGGLAQG 172
           VGG   G
Sbjct: 121 VGGKVLG 127

[Close]

BLAST of Tan0013169 vs. ExPASy Swiss-Prot
Match: Q9AT34 (40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3)

HSP 1 Score: 244.6 bits (623), Expect = 9.0e-64
Identity = 119/127 (93.70%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 45  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGK 104
           MVRVSVLNDALKSM+NAEKRGKRQVMIRPSSKV+IKFL+VMQKHGYIGEFEYVDDHR+GK
Sbjct: 1   MVRVSVLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQKHGYIGEFEYVDDHRSGK 60

Query: 105 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 164
           IVVELNGRLNKCGVISPRFDVGVKEIE WTARLLPSRQFGYIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 165 VGGLAQG 172
           VGG   G
Sbjct: 121 VGGKVLG 127

[Close]

BLAST of Tan0013169 vs. ExPASy Swiss-Prot
Match: O80646 (40S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=2)

HSP 1 Score: 231.5 bits (589), Expect = 7.9e-60
Identity = 112/127 (88.19%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 45  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGK 104
           MVR SVLND LKSM NAEK+GKRQVMIRPSSKVIIKFL VMQKHGYI EFEYVDDHR+GK
Sbjct: 1   MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGK 60

Query: 105 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 164
           IVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQFGYIVLTTSAGIMDHEEAR+KN
Sbjct: 61  IVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHEEARKKN 120

Query: 165 VGGLAQG 172
           VGG   G
Sbjct: 121 VGGKVLG 127

[Close]

BLAST of Tan0013169 vs. NCBI nr
Match: XP_019463034.1 (PREDICTED: 40S ribosomal protein S15a-1 isoform X3 [Lupinus angustifolius])

HSP 1 Score: 256.1 bits (653), Expect = 2.3e-64
Identity = 126/135 (93.33%), Postives = 130/135 (96.30%), Query Frame = 0


Query: 37  YLNIFAVNMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEY 96
           +L +FAV MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEY
Sbjct: 49  FLVLFAVIMVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEY 108

Query: 97  VDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMD 156
           VDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMD
Sbjct: 109 VDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMD 168

Query: 157 HEEARRKNVGGLAQG 172
           HEEARRKNVGG   G
Sbjct: 169 HEEARRKNVGGKVLG 183

[Close]

BLAST of Tan0013169 vs. NCBI nr
Match: KAF3972841.1 (hypothetical protein CMV_003680 [Castanea mollissima])

HSP 1 Score: 254.2 bits (648), Expect = 8.6e-64
Identity = 125/133 (93.98%), Postives = 128/133 (96.24%), Query Frame = 0


Query: 35  FGYLNIFAVNMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEF 94
           F + + +A  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEF
Sbjct: 23  FQFASTYAAAMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEF 82

Query: 95  EYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGI 154
           EYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGI
Sbjct: 83  EYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGI 142

Query: 155 MDHEEARRKNVGG 168
           MDHEEARRKNVGG
Sbjct: 143 MDHEEARRKNVGG 155

[Close]

BLAST of Tan0013169 vs. NCBI nr
Match: TKY71201.1 (40S ribosomal protein S15a-1 [Spatholobus suberectus])

HSP 1 Score: 253.4 bits (646), Expect = 1.5e-63
Identity = 128/144 (88.89%), Postives = 130/144 (90.28%), Query Frame = 0


Query: 28  CGIFNFNFGYLNIFAVNMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQK 87
           C +   N  Y+    V MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQK
Sbjct: 8   CSLLVMNI-YIFFVVVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQK 67

Query: 88  HGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIV 147
           HGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIV
Sbjct: 68  HGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIV 127

Query: 148 LTTSAGIMDHEEARRKNVGGLAQG 172
           LTTSAGIMDHEEARRKNVGG   G
Sbjct: 128 LTTSAGIMDHEEARRKNVGGKVLG 150

[Close]

BLAST of Tan0013169 vs. NCBI nr
Match: KAF2290128.1 (hypothetical protein GH714_003112 [Hevea brasiliensis])

HSP 1 Score: 253.4 bits (646), Expect = 1.5e-63
Identity = 127/137 (92.70%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 36  GYLNIFAV-NMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEF 95
           G  N+FA   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEF
Sbjct: 22  GMPNVFAFGRMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEF 81

Query: 96  EYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGI 155
           EYVDDHRAGKIVVELNGRLNKCGVISPRFD+GVKEIEGWTARLLPSRQFGYIVLTTSAGI
Sbjct: 82  EYVDDHRAGKIVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGYIVLTTSAGI 141

Query: 156 MDHEEARRKNVGGLAQG 172
           MDHEEARRKNVGG   G
Sbjct: 142 MDHEEARRKNVGGKVLG 158

[Close]

BLAST of Tan0013169 vs. NCBI nr
Match: KHN33076.1 (40S ribosomal protein S15a-1 [Glycine soja])

HSP 1 Score: 253.4 bits (646), Expect = 1.5e-63
Identity = 125/131 (95.42%), Postives = 126/131 (96.18%), Query Frame = 0


Query: 41  FAVNMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDH 100
           + V MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDH
Sbjct: 47  YLVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDH 106

Query: 101 RAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEA 160
           RAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEA
Sbjct: 107 RAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEA 166

Query: 161 RRKNVGGLAQG 172
           RRKNVGG   G
Sbjct: 167 RRKNVGGKVLG 177

[Close]

BLAST of Tan0013169 vs. ExPASy TrEMBL
Match: A0A6A6KQC3 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_003112 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 7.1e-64
Identity = 127/137 (92.70%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 36  GYLNIFAV-NMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEF 95
           G  N+FA   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEF
Sbjct: 22  GMPNVFAFGRMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEF 81

Query: 96  EYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGI 155
           EYVDDHRAGKIVVELNGRLNKCGVISPRFD+GVKEIEGWTARLLPSRQFGYIVLTTSAGI
Sbjct: 82  EYVDDHRAGKIVVELNGRLNKCGVISPRFDIGVKEIEGWTARLLPSRQFGYIVLTTSAGI 141

Query: 156 MDHEEARRKNVGGLAQG 172
           MDHEEARRKNVGG   G
Sbjct: 142 MDHEEARRKNVGGKVLG 158

[Close]

BLAST of Tan0013169 vs. ExPASy TrEMBL
Match: A0A445GRJ7 (40S ribosomal protein S15a-1 isoform A OS=Glycine soja OX=3848 GN=D0Y65_040501 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 9.3e-64
Identity = 125/130 (96.15%), Postives = 125/130 (96.15%), Query Frame = 0


Query: 38  LNIFAVNMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYV 97
           L    V MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYV
Sbjct: 49  LKFVTVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYV 108

Query: 98  DDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDH 157
           DDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDH
Sbjct: 109 DDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDH 168

Query: 158 EEARRKNVGG 168
           EEARRKNVGG
Sbjct: 169 EEARRKNVGG 178

[Close]

BLAST of Tan0013169 vs. ExPASy TrEMBL
Match: A0A5N5FUX2 (40S ribosomal protein S15a-1 OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_006570 PE=3 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 9.3e-64
Identity = 126/137 (91.97%), Postives = 128/137 (93.43%), Query Frame = 0


Query: 45  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGK 104
           MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGK
Sbjct: 1   MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGK 60

Query: 105 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 164
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 165 VGGLAQGAIVDNVSLQL 182
           VGG   G +    S +L
Sbjct: 121 VGGKVLGVLEKWCSTEL 137

[Close]

BLAST of Tan0013169 vs. ExPASy TrEMBL
Match: A0A445GRR2 (40S ribosomal protein S15a-1 isoform B (Fragment) OS=Glycine soja OX=3848 GN=D0Y65_040501 PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.2e-63
Identity = 124/127 (97.64%), Postives = 125/127 (98.43%), Query Frame = 0


Query: 41  FAVNMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDH 100
           + V MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDH
Sbjct: 17  YLVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDH 76

Query: 101 RAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEA 160
           RAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEA
Sbjct: 77  RAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEA 136

Query: 161 RRKNVGG 168
           RRKNVGG
Sbjct: 137 RRKNVGG 143

[Close]

BLAST of Tan0013169 vs. ExPASy TrEMBL
Match: V7C7S0 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G095800g PE=3 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.2e-63
Identity = 124/136 (91.18%), Postives = 128/136 (94.12%), Query Frame = 0


Query: 36  GYLNIFAVNMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFE 95
           G+ ++  V MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFE
Sbjct: 36  GFFSLLLVTMVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLMVMQKHGYIGEFE 95

Query: 96  YVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIM 155
           YVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIE WTARLLPSRQFGYIVLTTSAGIM
Sbjct: 96  YVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEPWTARLLPSRQFGYIVLTTSAGIM 155

Query: 156 DHEEARRKNVGGLAQG 172
           DHEEARRKNVGG   G
Sbjct: 156 DHEEARRKNVGGKVLG 171

[Close]

BLAST of Tan0013169 vs. TAIR 10
Match: AT1G07770.1 (ribosomal protein S15A )

HSP 1 Score: 249.2 bits (635), Expect = 2.6e-66
Identity = 121/127 (95.28%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 45  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGK 104
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHR+GK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 105 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 164
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 165 VGGLAQG 172
           VGG   G
Sbjct: 121 VGGKVLG 127

[Close]

BLAST of Tan0013169 vs. TAIR 10
Match: AT1G07770.2 (ribosomal protein S15A )

HSP 1 Score: 249.2 bits (635), Expect = 2.6e-66
Identity = 121/127 (95.28%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 45  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGK 104
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHR+GK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 105 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 164
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 165 VGGLAQG 172
           VGG   G
Sbjct: 121 VGGKVLG 127

[Close]

BLAST of Tan0013169 vs. TAIR 10
Match: AT5G59850.1 (Ribosomal protein S8 family protein )

HSP 1 Score: 249.2 bits (635), Expect = 2.6e-66
Identity = 121/127 (95.28%), Postives = 124/127 (97.64%), Query Frame = 0


Query: 45  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGK 104
           MVR+SVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHR+GK
Sbjct: 1   MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 105 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 164
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 120

Query: 165 VGGLAQG 172
           VGG   G
Sbjct: 121 VGGKVLG 127

[Close]

BLAST of Tan0013169 vs. TAIR 10
Match: AT3G46040.1 (ribosomal protein S15A D )

HSP 1 Score: 246.1 bits (627), Expect = 2.2e-65
Identity = 119/127 (93.70%), Postives = 123/127 (96.85%), Query Frame = 0


Query: 45  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGK 104
           MVR+SVLND LKSMYNAEKRGKRQVMIRPSSKVIIKFL+VMQKHGYIGEFEYVDDHR+GK
Sbjct: 1   MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGEFEYVDDHRSGK 60

Query: 105 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 164
           IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFG+IVLTTSAGIMDHEEARRKN
Sbjct: 61  IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGFIVLTTSAGIMDHEEARRKN 120

Query: 165 VGGLAQG 172
           VGG   G
Sbjct: 121 VGGKVLG 127

[Close]

BLAST of Tan0013169 vs. TAIR 10
Match: AT2G39590.1 (Ribosomal protein S8 family protein )

HSP 1 Score: 231.5 bits (589), Expect = 5.6e-61
Identity = 112/127 (88.19%), Postives = 118/127 (92.91%), Query Frame = 0


Query: 45  MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGK 104
           MVR SVLND LKSM NAEK+GKRQVMIRPSSKVIIKFL VMQKHGYI EFEYVDDHR+GK
Sbjct: 7   MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAEFEYVDDHRSGK 66

Query: 105 IVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKN 164
           IVVELNGRLN CGVISPR+D+GVKEIEGWTA+LLPSRQFGYIVLTTSAGIMDHEEAR+KN
Sbjct: 67  IVVELNGRLNNCGVISPRYDLGVKEIEGWTAKLLPSRQFGYIVLTTSAGIMDHEEARKKN 126

Query: 165 VGGLAQG 172
           VGG   G
Sbjct: 127 VGGKVLG 133

The following BLAST results are available for this feature:

BLAST of Tan0013169 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42798	3.6e-65	95.28	40S ribosomal protein S15a-1 OS=Arabidopsis thaliana OX=3702 GN=RPS15AA PE=2 SV=...	[more]
Q00332	1.1e-64	94.49	40S ribosomal protein S15a OS=Brassica napus OX=3708 GN=RPS15A PE=2 SV=3	[more]
Q9LX88	3.1e-64	93.70	40S ribosomal protein S15a-4 OS=Arabidopsis thaliana OX=3702 GN=RPS15AD PE=2 SV=...	[more]
Q9AT34	9.0e-64	93.70	40S ribosomal protein S15a OS=Daucus carota OX=4039 GN=RPS15A PE=2 SV=3	[more]
O80646	7.9e-60	88.19	40S ribosomal protein S15a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS15AC PE=2 SV=...	[more]

BLAST of Tan0013169 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_019463034.1	2.3e-64	93.33	PREDICTED: 40S ribosomal protein S15a-1 isoform X3 [Lupinus angustifolius]	[more]
KAF3972841.1	8.6e-64	93.98	hypothetical protein CMV_003680 [Castanea mollissima]	[more]
TKY71201.1	1.5e-63	88.89	40S ribosomal protein S15a-1 [Spatholobus suberectus]	[more]
KAF2290128.1	1.5e-63	92.70	hypothetical protein GH714_003112 [Hevea brasiliensis]	[more]
KHN33076.1	1.5e-63	95.42	40S ribosomal protein S15a-1 [Glycine soja]	[more]

BLAST of Tan0013169 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6A6KQC3	7.1e-64	92.70	Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_003112 PE=3 SV=1	[more]
A0A445GRJ7	9.3e-64	96.15	40S ribosomal protein S15a-1 isoform A OS=Glycine soja OX=3848 GN=D0Y65_040501 P...	[more]
A0A5N5FUX2	9.3e-64	91.97	40S ribosomal protein S15a-1 OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN...	[more]
A0A445GRR2	1.2e-63	97.64	40S ribosomal protein S15a-1 isoform B (Fragment) OS=Glycine soja OX=3848 GN=D0Y...	[more]
V7C7S0	1.2e-63	91.18	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G095800g PE=3 ...	[more]

BLAST of Tan0013169 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07770.1	2.6e-66	95.28	ribosomal protein S15A	[more]
AT1G07770.2	2.6e-66	95.28	ribosomal protein S15A	[more]
AT5G59850.1	2.6e-66	95.28	Ribosomal protein S8 family protein	[more]
AT3G46040.1	2.2e-65	93.70	ribosomal protein S15A D	[more]
AT2G39590.1	5.6e-61	88.19	Ribosomal protein S8 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000630	Ribosomal protein S8	PFAM	PF00410	Ribosomal_S8	coord: 7..130 e-value: 8.5E-22 score: 77.4
IPR000630	Ribosomal protein S8	PANTHER	PTHR11758	40S RIBOSOMAL PROTEIN S15A	coord: 1..130
IPR000630	Ribosomal protein S8	PROSITE	PS00053	RIBOSOMAL_S8	coord: 100..117
IPR000630	Ribosomal protein S8	HAMAP	MF_01302_A	Ribosomal_S8_A	coord: 2..130 score: 32.394966
None	No IPR available	GENE3D	3.30.1490.10		coord: 70..130 e-value: 1.0E-36 score: 126.3
None	No IPR available	GENE3D	3.30.1370.30		coord: 1..69 e-value: 3.0E-36 score: 125.1
None	No IPR available	PANTHER	PTHR11758:SF36	BNAA02G06730D PROTEIN	coord: 1..130
IPR035987	Ribosomal protein S8 superfamily	SUPERFAMILY	56047	Ribosomal protein S8	coord: 4..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013169.2	Tan0013169.2	mRNA
Tan0013169.1	Tan0013169.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome