Tan0013142 (gene) Snake gourd v1

Overview
NameTan0013142
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionUnknown protein
LocationLG07: 3179430 .. 3179972 (+)
RNA-Seq ExpressionTan0013142
SyntenyTan0013142
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCATCCCCACCATTTTTTAGCACATTGAAGCTCATAAAGCATCAAAATTCTTTGGAGAAGAAGAAGTTGAAATGGAGGCAAACAACAGAAAGCGCAAAGGCTTCATGAAAGGGAAGTTGATGCCTTTCTACAAGCAATACAATGGAAGCAAAACAAAGCAAACTGGTTTGGTTGGCTATGTCTTCCACAGGGACTATAGTATTTCTCCACACAACGTTGCTTTGCTGGTCCAGGCGAATCCCGACCGGGATACCGCAGCGACTCGTGACTCGTTGAGCCAGACGTTCGATAACCCGTATGGAATCGTCGCCGATGAAGGCGTCGATGTAAAGGCTGCAAACTATATTTCCTCCACACTAGCACGGTTCAAAAGCTTGAACGAGTTAACTCCGATAGAAATATCGTCGCCCCCGTTGGCTCGTCGAGAGATTTAATGACTTATTGAGCACCTTAATTTATCTTCCTGTGCTTGTATTATTATTCTAAGTAATGATTTAATTTGGCCGACCCGACTTGAGTGTAGCTCACAAAGTCAAGTATAG

mRNA sequence

TCCATCCCCACCATTTTTTAGCACATTGAAGCTCATAAAGCATCAAAATTCTTTGGAGAAGAAGAAGTTGAAATGGAGGCAAACAACAGAAAGCGCAAAGGCTTCATGAAAGGGAAGTTGATGCCTTTCTACAAGCAATACAATGGAAGCAAAACAAAGCAAACTGGTTTGGTTGGCTATGTCTTCCACAGGGACTATAGTATTTCTCCACACAACGTTGCTTTGCTGGTCCAGGCGAATCCCGACCGGGATACCGCAGCGACTCGTGACTCGTTGAGCCAGACGTTCGATAACCCGTATGGAATCGTCGCCGATGAAGGCGTCGATGTAAAGGCTGCAAACTATATTTCCTCCACACTAGCACGGTTCAAAAGCTTGAACGAGTTAACTCCGATAGAAATATCGTCGCCCCCGTTGGCTCGTCGAGAGATTTAATGACTTATTGAGCACCTTAATTTATCTTCCTGTGCTTGTATTATTATTCTAAGTAATGATTTAATTTGGCCGACCCGACTTGAGTGTAGCTCACAAAGTCAAGTATAG

Coding sequence (CDS)

ATGGAGGCAAACAACAGAAAGCGCAAAGGCTTCATGAAAGGGAAGTTGATGCCTTTCTACAAGCAATACAATGGAAGCAAAACAAAGCAAACTGGTTTGGTTGGCTATGTCTTCCACAGGGACTATAGTATTTCTCCACACAACGTTGCTTTGCTGGTCCAGGCGAATCCCGACCGGGATACCGCAGCGACTCGTGACTCGTTGAGCCAGACGTTCGATAACCCGTATGGAATCGTCGCCGATGAAGGCGTCGATGTAAAGGCTGCAAACTATATTTCCTCCACACTAGCACGGTTCAAAAGCTTGAACGAGTTAACTCCGATAGAAATATCGTCGCCCCCGTTGGCTCGTCGAGAGATTTAA

Protein sequence

MEANNRKRKGFMKGKLMPFYKQYNGSKTKQTGLVGYVFHRDYSISPHNVALLVQANPDRDTAATRDSLSQTFDNPYGIVADEGVDVKAANYISSTLARFKSLNELTPIEISSPPLARREI
Homology
BLAST of Tan0013142 vs. NCBI nr
Match: KAG6588895.1 (hypothetical protein SDJN03_17460, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 177.6 bits (449), Expect = 6.6e-41
Identity = 90/104 (86.54%), Postives = 94/104 (90.38%), Query Frame = 0

Query: 17  MPFYKQYNGSKTKQTGLVGYVFHRDYSISPHNVALLVQANPDRDTAATRDSLSQTFDNPY 76
           MPFYKQY G+KTK TGLVGYVFHRDY+ISPHNVALLV  NP  DTA TRDSL+Q FDN Y
Sbjct: 1   MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENPGPDTAVTRDSLTQ-FDNLY 60

Query: 77  GIVADEGVDVKAANYISSTLARFKSLNELTPIEISSPPLARREI 121
           GIVADEG+DVKAANYISSTLARFKSLNELTPIEI SPPLARREI
Sbjct: 61  GIVADEGIDVKAANYISSTLARFKSLNELTPIEILSPPLARREI 103

BLAST of Tan0013142 vs. NCBI nr
Match: KAA0042928.1 (hypothetical protein E6C27_scaffold44G004520 [Cucumis melo var. makuwa] >TYK05327.1 hypothetical protein E5676_scaffold108G001540 [Cucumis melo var. makuwa])

HSP 1 Score: 175.6 bits (444), Expect = 2.5e-40
Identity = 98/124 (79.03%), Postives = 106/124 (85.48%), Query Frame = 0

Query: 1   MEANNRKRKGFMKGKLMPFYKQYNGSKTKQTGLVGYVFHRD-YS--ISPHNVALLVQANP 60
           MEAN RK +GFMKGKLMPFYKQYNGSKTKQTGLVGYVFHR+ YS   S HN+ALLVQ NP
Sbjct: 1   MEANKRKLRGFMKGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSSQHNIALLVQDNP 60

Query: 61  DRDTAATRDSLSQTFDNPYGIVADEGVDVKAANYISSTLARFKSLNELT-PIEISSPPLA 120
            RDT ATR SLSQ+ D+ YGIVADEGVDVKAANYISSTLARFKSLNEL  PIE+SS PL 
Sbjct: 61  SRDTTATRGSLSQS-DHSYGIVADEGVDVKAANYISSTLARFKSLNELPHPIEMSSIPLP 120

BLAST of Tan0013142 vs. NCBI nr
Match: KAE8650773.1 (hypothetical protein Csa_017653 [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 1.7e-28
Identity = 79/116 (68.10%), Postives = 84/116 (72.41%), Query Frame = 0

Query: 1   MEANNRKRKGFMKGKLMPFYKQYNGSKTKQTGLVGYVFHRDYSISPHNVALLVQANPDRD 60
           MEAN RK +GFM+GKLMPFYKQYNGSKTKQTGL                      +P RD
Sbjct: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGL---------------------DDPGRD 60

Query: 61  TAATRDSLSQTFDNPYGIVADEGVDVKAANYISSTLARFKSLNELT-PIEISSPPL 116
           T ATRDSLSQ FD  YGI+ADEGVDVKAANYISSTLARFKSLNEL  PIE+SS PL
Sbjct: 61  TTATRDSLSQ-FDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPL 94

BLAST of Tan0013142 vs. NCBI nr
Match: KAG7022660.1 (hypothetical protein SDJN02_16394, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 113.6 bits (283), Expect = 1.2e-21
Identity = 55/69 (79.71%), Postives = 60/69 (86.96%), Query Frame = 0

Query: 17 MPFYKQYNGSKTKQTGLVGYVFHRDYSISPHNVALLVQANPDRDTAATRDSLSQTFDNPY 76
          MPFYKQY G+KTK TGLVGYVFHRDY+ISPHNVALLV  NP  DTA TRDSL+Q FD+ Y
Sbjct: 1  MPFYKQYKGTKTKPTGLVGYVFHRDYAISPHNVALLVHENPGPDTAVTRDSLTQ-FDSLY 60

Query: 77 GIVADEGVD 86
          GIVADEG+D
Sbjct: 61 GIVADEGID 68

BLAST of Tan0013142 vs. NCBI nr
Match: XP_021648774.1 (uncharacterized protein LOC110641383 [Hevea brasiliensis])

HSP 1 Score: 83.6 bits (205), Expect = 1.3e-12
Identity = 52/116 (44.83%), Postives = 68/116 (58.62%), Query Frame = 0

Query: 4   NNRKRKGFMKGKLMPFYK---------QYNGSK-------TKQTGLVGYVFHRDYSISP- 63
           +NRKR+GFMKGKLMPFY+         QY  SK       +  T  VG+  H+DY I+P 
Sbjct: 3   SNRKRRGFMKGKLMPFYRSPKPSSSNLQYTSSKVIKPSQSSPSTPSVGFFVHQDYIIAPP 62

Query: 64  --HNVALLVQANPDRDTAATRDSLSQTFDNPYGIVADEGVDVKAANYISSTLARFK 101
             + V+ ++   PD    + RD L+Q FD  YG+  DE VD+KAA+YISS   RFK
Sbjct: 63  KQNKVSFIIPPAPD----SNRDKLTQ-FDKVYGVPGDESVDIKAASYISSVQERFK 113

BLAST of Tan0013142 vs. ExPASy TrEMBL
Match: A0A0A0LVE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097750 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 9.3e-41
Identity = 94/118 (79.66%), Postives = 102/118 (86.44%), Query Frame = 0

Query: 1   MEANNRKRKGFMKGKLMPFYKQYNGSKTKQTGLVGYVFHRD--YSISPHNVALLVQANPD 60
           MEAN RK +GFM+GKLMPFYKQYNGSKTKQTGLVGYVFHR+   S+S HN+ LLVQ +P 
Sbjct: 1   MEANKRKLRGFMRGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSQHNIGLLVQDDPG 60

Query: 61  RDTAATRDSLSQTFDNPYGIVADEGVDVKAANYISSTLARFKSLNELT-PIEISSPPL 116
           RDT ATRDSLSQ FD  YGI+ADEGVDVKAANYISSTLARFKSLNEL  PIE+SS PL
Sbjct: 61  RDTTATRDSLSQ-FDRSYGIIADEGVDVKAANYISSTLARFKSLNELPHPIELSSIPL 117

BLAST of Tan0013142 vs. ExPASy TrEMBL
Match: A0A5D3C0J6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001540 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 1.2e-40
Identity = 98/124 (79.03%), Postives = 106/124 (85.48%), Query Frame = 0

Query: 1   MEANNRKRKGFMKGKLMPFYKQYNGSKTKQTGLVGYVFHRD-YS--ISPHNVALLVQANP 60
           MEAN RK +GFMKGKLMPFYKQYNGSKTKQTGLVGYVFHR+ YS   S HN+ALLVQ NP
Sbjct: 1   MEANKRKLRGFMKGKLMPFYKQYNGSKTKQTGLVGYVFHRECYSSVSSQHNIALLVQDNP 60

Query: 61  DRDTAATRDSLSQTFDNPYGIVADEGVDVKAANYISSTLARFKSLNELT-PIEISSPPLA 120
            RDT ATR SLSQ+ D+ YGIVADEGVDVKAANYISSTLARFKSLNEL  PIE+SS PL 
Sbjct: 61  SRDTTATRGSLSQS-DHSYGIVADEGVDVKAANYISSTLARFKSLNELPHPIEMSSIPLP 120

BLAST of Tan0013142 vs. ExPASy TrEMBL
Match: A0A6A6LUB7 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_001496 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 6.3e-13
Identity = 52/116 (44.83%), Postives = 68/116 (58.62%), Query Frame = 0

Query: 4   NNRKRKGFMKGKLMPFYK---------QYNGSK-------TKQTGLVGYVFHRDYSISP- 63
           +NRKR+GFMKGKLMPFY+         QY  SK       +  T  VG+  H+DY I+P 
Sbjct: 37  SNRKRRGFMKGKLMPFYRSPKPSSSNLQYTSSKVIKPSQSSPSTPSVGFFVHQDYIIAPP 96

Query: 64  --HNVALLVQANPDRDTAATRDSLSQTFDNPYGIVADEGVDVKAANYISSTLARFK 101
             + V+ ++   PD    + RD L+Q FD  YG+  DE VD+KAA+YISS   RFK
Sbjct: 97  KQNKVSFIIPPAPD----SNRDKLTQ-FDKVYGVPGDESVDIKAASYISSVQERFK 147

BLAST of Tan0013142 vs. ExPASy TrEMBL
Match: A0A067LN74 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10105 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 4.1e-12
Identity = 49/112 (43.75%), Postives = 62/112 (55.36%), Query Frame = 0

Query: 4   NNRKRKGFMKGKLMPFYKQYNGSKTKQ-------------TGLVGYVFHRDYSISP--HN 63
           +NRKR+GFMKGKL+PFY+    + T Q                VG+V H+DY I+P    
Sbjct: 3   SNRKRRGFMKGKLIPFYRSSKATSTVQYSSKVKPSQSSPSAASVGFVVHQDYIITPPKQK 62

Query: 64  VALLVQANPDRDTAATRDSLSQTFDNPYGIVADEGVDVKAANYISSTLARFK 101
           V+ +V   P  D  + RD     FD  YG+  DEGVD+KAA YISS   RFK
Sbjct: 63  VSFIV---PTAD--SNRDKYLSQFDKLYGVAGDEGVDIKAATYISSVQERFK 109

BLAST of Tan0013142 vs. ExPASy TrEMBL
Match: A0A2I4E7Q1 (uncharacterized protein LOC108987043 OS=Juglans regia OX=51240 GN=LOC108987043 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 8.5e-10
Identity = 48/116 (41.38%), Postives = 65/116 (56.03%), Query Frame = 0

Query: 1   MEANNRKRKGFMKGKLMPFYK---------QYNGSKTK------QTGLVGYVFHRDYSIS 60
           MEA NRK +GF+KGKLMPF++         QY  SK K       T  +G+V H+DY+++
Sbjct: 1   MEA-NRKLRGFVKGKLMPFHRSATKPSSTVQYISSKIKPNQSSPSTAPLGFVVHQDYAVA 60

Query: 61  -PHNVALLVQANPDRDTAATRDSLSQTFDNPYGIVADEGVDVKAANYISSTLARFK 101
            P   A+     PD +       +   ++N YG+ ADE VD+KAA YISS   RFK
Sbjct: 61  QPKQKAVSFIVPPDHNMINRDLVVLSKYENLYGLAADESVDMKAATYISSVQERFK 115

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6588895.16.6e-4186.54hypothetical protein SDJN03_17460, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0042928.12.5e-4079.03hypothetical protein E6C27_scaffold44G004520 [Cucumis melo var. makuwa] >TYK0532... [more]
KAE8650773.11.7e-2868.10hypothetical protein Csa_017653 [Cucumis sativus][more]
KAG7022660.11.2e-2179.71hypothetical protein SDJN02_16394, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_021648774.11.3e-1244.83uncharacterized protein LOC110641383 [Hevea brasiliensis][more]
Match NameE-valueIdentityDescription
A0A0A0LVE79.3e-4179.66Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G097750 PE=4 SV=1[more]
A0A5D3C0J61.2e-4079.03Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A6A6LUB76.3e-1344.83Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_001496 PE=4 SV=1[more]
A0A067LN744.1e-1243.75Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10105 PE=4 SV=1[more]
A0A2I4E7Q18.5e-1041.38uncharacterized protein LOC108987043 OS=Juglans regia OX=51240 GN=LOC108987043 P... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36030FAMILY NOT NAMEDcoord: 1..104
NoneNo IPR availablePANTHERPTHR36030:SF1SUBFAMILY NOT NAMEDcoord: 1..104

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0013142.1Tan0013142.1mRNA