Tan0013115 (gene) Snake gourd v1

Overview


Name	Tan0013115
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Retrotransposable element Tf2
Location	LG03: 41981170 .. 41984948 (+)
RNA-Seq Expression	Tan0013115
Synteny	Tan0013115

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTGTCCCCAGGAAGCTCAATTGGAGTGATCTTACTGCTGATCCTATCTGGAGTATCGAGCATGTCACTCTCCCAAAAAATAGGCAGAGCACCACTGCCCATATAACTGAATATGATGATGGACATGTCGAGGTTCAATTTCAAGAAGATGAACCAAGACGTCCCCGAATTCAAGAAATAATGAGTAGTCGCCCTAGTGTGTGTTCAGACACTAGGACAACCACTAAAGGAAGACCAATCAGTAGGTCTAAATCCATGCGAACGTCCGTAGACTTTGACCAACAAGTCCCAGACATTCAGTATGAGAAATCCGAAGGTTCCATTTCTCCGACTCAAACTGACATGGAGCGGAAATCTGGATATATATATATAATCAAATCAACGTTCTCTCTACAGATATAAATGAAATATCTATAGACGACGAATTGGGTGAAAAAATGTATGATGACTACATCAATACTTATATTCACCAAGAAGATTGGGCGAACCAACCCAAATTCCTGATGAAAGAAGAATTTCTTGCCCTAATGAGGCCAAGAAAGCATCAAGAAGAACTAAATGTTTTAAAGAAGCCCATTACATGGGTCACTTCCAGTGGAAAAGAAGTATCTTCCGACTATCCTCCTGAAGAAGAAGCCAGCTTCTCTCATCCATTGGTAGCTACCTCTACAATAATCTCTTCACCATACAAAACTATCGATGAAGAGAAGACAAAGACTGTTGGGGTCAGAGAAATAAAAATATCCAACAGCAACTCAACTATTCAAATAAGGTCCTTACCACCTTATCAAAAACAGTTGAAGAAATTAAGTCTGATAAAACTGTCAAGAGTATCATTCGACCAGATCATGCTGGACTACCAAAGATCGACCCCAACAGGCCGATAGTCCAACCCAATGTCTATGACCTAAAAATAGGAAACGTAGACAGAGAAGATCTTCTCTCTGAAATAAATAAGAAGATCTCCAAGATGAATATTTCTGCAGATCAAAAGGATGTACCAGAAACATCAAAGAAAAGTATCAGTTTTGGAGTTCCCAAAAACCAACTGGTAGCATCAATATGATTAGAGGAATGGACGATTCTTCTACTTCGAAAATCCTTCCTATCAGAACATACAACACTGATATGAAGAATCATTACTCCAAACCTCTCTCCTCGATTTAGGATTGGATGATTATAAACCAGAATCCCGAGATTTCGACGGAAATTCTGTCATCACTTGGAATATCGATGGTTGTTCTGAAGGACAAATGATGACCATATTCCAAGAAATGTTCGTCGCTGCAACAACTTATAGCAGCAAAAAGTTTGACCAGCGAGACATTGTAAAAGCTCTCACTTCTGGTTTCACTGGAAATCTAAGGAGTTGGTATCATAATCAGCTGACCGAAAATAGTCGAGAAGCTATCAACAATTCAACTATCCAAAGGGTTGAAACCAAAATTAATCCAAACGGACAAGAAGAACAGTATTTGATTAGCGAATCAAACGTTGTTGATAGTCTTGTCTACACAGCAATCAAACATTTTCTGGGAAAAACAACCCTATGGAGCGATCAACCAACTGAAGCTCTATTAGGACTAAAGTGCCACAAAATGAGTGATTTCAAATGGTATAAAGACACCTTTATGGCCCGACTTTATACATTAACCACATGTGGAGATGTCGTTTGGAAACAGAAAATATGTTTCGTGACTTCCTCGATACATAAGTCAAAGTTCTCTATACCACCGTGGTCACGTGATCGGTGGAATGGATATCGATTGGGAATCTCTTACTCATGGAGATATCAACAGTACTGTTCAATCAATTTGCCTAGAATTATGCCAAGATCAAAAGCATAATTCAAAGATGGCCAGAGATTCTGATTACAGAAGGGAATTGGGATCTTTCTGTAAACAGTATGGGATGGACAATACCCCTCCATCAAAGAAGAAGAATTATTCGAAGAAATCTTTTGGGAAAAGCAAGAAAAAAGAATTTTCAAAAGATTACTCTTACAAAAGAAGAAATTACGGCAGAAGAAAGAGAACTTCTTCTTTAAAGCGAAGCACAATCTTCTTTAAATGCAAAAAGGAGGGACATTATGCTAATAAATGCCCCTTAGTCAAGAAAATTCATAAATTAGAAATTGAAGAAGAGATAAAACAATCTCTTCTCAATATTCTTGGAGATAGCGAGATGTCTTCCGACGAAGAAAACTCTTCTGAAGACATGGTCAACGAACTAAAAAAAGAATCTTGTTTCAAAACAAATCTTTGCAAGATGGCAAGCAATCTTATCTTGTTTTGATTTTCGAATAGAGCCTATAAAAGGAACAGATAGTAGCCTAGCTGATTATCTCTCGAGAGAACATCTCTCAAGAACAATCTCTAAGCTCTCTTTTATCAATGTTTCCAAGCCGACCACGGCCGCCCCCAATGGGACGGCCACCTACGCTTCCTCTCTCAATCAACCCTGATCAAAGGGTTCCACAACAAACAACTAGTTCTCCCGGAACTAGTTCTCAAAGGGGAAAACGCCCCATTGCTCAAACATCTGCACTTCCACCCATGAATGCAGACAATTATGCGATGGACCTTGAATTTGAAACAGTGTCCAGACGCAGACAAGGTTCCTCCTCAAGGAGTTTATCAAGGACAGGGGAAAGTCGTAGCCAAGTTTCCTCTTCCCATATCTCAAACAGGCCTTCATCGCCTTCTACAACATCCGATTCGATTCCAAAGAGGACTCAATCGTATGCTAGAACTGTCAAACCTGCTATTTTTCAGGCAAGGCCTCAAATAACAAGTTATCATACCAAAACTTCTTTGGAAGAAGCCGTTATTGAACCAGAATTTGACGGCCCCACTCCACAAGAAGCATGTGGACAATTATATCCTCGAGGCTTCCAATTTGTGCCCGAAGATATTTTAAAAACCAGAAAGTTCTACGAGTTCATTCTGGTTGATACAAAATCAGGAGAGACATGTACCGGACAGAAATGATCCGGCAAGAATAATCTTTTCAAAACTAAAAATTTTCAGGGTCTTGACTCCATCCCACTGGCCTCAGGGGATGTCAGTTCCAAGAAAAGTTTCAAGGAATTTTAAACCCCAAACATATAGCTACCATGACTACATGAAAGCGTGGTACAATGTGTTTTGGTACGAATCATACAACCATTCTTGGTTAGTTCGTTTTGTAAGAAATCCTACAAACATAACTTCCCTAATTGGTTCCAAAAATGGTGGAATTATTTTGGAATTTCACAAGAAATTTTTCCTGTTGAAATTCAAAGATCTTTTCACCTATTTTCAAATAGTGTCCATTCGTTACCGCTTGCGATGACGTTCAAATTCTCTTTATTTTTTCAATTACCTTGGATTTTCTGTTGGACTCACCAGCTGGCTCCAAGAGGACAATTTAAAACTTTAAATAAAGTTTTAAAAATCAAATGGTGGGAAAAATTTGATGTATCCCATCTTTCCGAAGAAAGGATTAGTAAATTCCTTAAAGCTAATCCACATCATTCACGAGCGGAAGAAGAACAACTTCTTCTCCAAAGGAGCTCACTTATTTCCTCTTTAGCCGGAGTGTCCTCTACCTCTGAGCTACAGACAGTCATTCAGGGAGCATTACAAAGAGAAGACGACAACGCTCCAGTTCAAGAAGGAATTCCCGAAAATGATGATATTATTTCGGAGTCTTCCGTCAATGATATCGAATTTGAATATGATCCATATTTAAATTTCGATATCCTAGACCCATACTATGATTCCCAGCCGGGATAA

mRNA sequence

ATGACTGTCCCCAGGAAGCTCAATTGGAGTGATCTTACTGCTGATCCTATCTGGAGTATCGAGCATGTCACTCTCCCAAAAAATAGGCAGAGCACCACTGCCCATATAACTGAATATGATGATGGACATGTCGAGGTTCAATTTCAAGAAGATGAACCAAGACGTCCCCGAATTCAAGAAATAATGAGTAGTCGCCCTAGTGTGTGTTCAGACACTAGGACAACCACTAAAGGAAGACCAATCAGTAGGTCTAAATCCATGCGAACGTCCGTAGACTTTGACCAACAAGTCCCAGACATTCAGTATGAGAAATCCGAAGGTTCCATTTCTCCGACTCAAACTGACATGGAGCGGAAATCTGGATATATATATATAATCAAATCAACTTCTCAAAGGGGAAAACGCCCCATTGCTCAAACATCTGCACTTCCACCCATGAATGCAGACAATTATGCGATGGACCTTGAATTTGAAACAGTGTCCAGACGCAGACAAGGTTCCTCCTCAAGGAGTTTATCAAGGACAGGGGAAAGTCGTAGCCAAGTTTCCTCTTCCCATATCTCAAACAGGCCTTCATCGCCTTCTACAACATCCGATTCGATTCCAAAGAGGACTCAATCGTATGCTAGAACTGTCAAACCTGCTATTTTTCAGGCAAGGCCTCAAATAACAAGTTATCATACCAAAACTTCTTTGGAAGAAGCCGTTATTGAACCAGAATTTGACGGCCCCACTCCACAAGAAGCATGTGGACAATTATATCCTCGAGGCTTCCAATTTGTGCCCGAAGATATTTTAAAAACCAGAAAAGGACAATTTAAAACTTTAAATAAAGTTTTAAAAATCAAATGGTGGGAAAAATTTGATGTATCCCATCTTTCCGAAGAAAGGATTAGTAAATTCCTTAAAGCTAATCCACATCATTCACGAGCGGAAGAAGAACAACTTCTTCTCCAAAGGAGCTCACTTATTTCCTCTTTAGCCGGAGTGTCCTCTACCTCTGAGCTACAGACAGTCATTCAGGGAGCATTACAAAGAGAAGACGACAACGCTCCAGTTCAAGAAGGAATTCCCGAAAATGATGATATTATTTCGGAGTCTTCCGTCAATGATATCGAATTTGAATATGATCCATATTTAAATTTCGATATCCTAGACCCATACTATGATTCCCAGCCGGGATAA

Coding sequence (CDS)

ATGACTGTCCCCAGGAAGCTCAATTGGAGTGATCTTACTGCTGATCCTATCTGGAGTATCGAGCATGTCACTCTCCCAAAAAATAGGCAGAGCACCACTGCCCATATAACTGAATATGATGATGGACATGTCGAGGTTCAATTTCAAGAAGATGAACCAAGACGTCCCCGAATTCAAGAAATAATGAGTAGTCGCCCTAGTGTGTGTTCAGACACTAGGACAACCACTAAAGGAAGACCAATCAGTAGGTCTAAATCCATGCGAACGTCCGTAGACTTTGACCAACAAGTCCCAGACATTCAGTATGAGAAATCCGAAGGTTCCATTTCTCCGACTCAAACTGACATGGAGCGGAAATCTGGATATATATATATAATCAAATCAACTTCTCAAAGGGGAAAACGCCCCATTGCTCAAACATCTGCACTTCCACCCATGAATGCAGACAATTATGCGATGGACCTTGAATTTGAAACAGTGTCCAGACGCAGACAAGGTTCCTCCTCAAGGAGTTTATCAAGGACAGGGGAAAGTCGTAGCCAAGTTTCCTCTTCCCATATCTCAAACAGGCCTTCATCGCCTTCTACAACATCCGATTCGATTCCAAAGAGGACTCAATCGTATGCTAGAACTGTCAAACCTGCTATTTTTCAGGCAAGGCCTCAAATAACAAGTTATCATACCAAAACTTCTTTGGAAGAAGCCGTTATTGAACCAGAATTTGACGGCCCCACTCCACAAGAAGCATGTGGACAATTATATCCTCGAGGCTTCCAATTTGTGCCCGAAGATATTTTAAAAACCAGAAAAGGACAATTTAAAACTTTAAATAAAGTTTTAAAAATCAAATGGTGGGAAAAATTTGATGTATCCCATCTTTCCGAAGAAAGGATTAGTAAATTCCTTAAAGCTAATCCACATCATTCACGAGCGGAAGAAGAACAACTTCTTCTCCAAAGGAGCTCACTTATTTCCTCTTTAGCCGGAGTGTCCTCTACCTCTGAGCTACAGACAGTCATTCAGGGAGCATTACAAAGAGAAGACGACAACGCTCCAGTTCAAGAAGGAATTCCCGAAAATGATGATATTATTTCGGAGTCTTCCGTCAATGATATCGAATTTGAATATGATCCATATTTAAATTTCGATATCCTAGACCCATACTATGATTCCCAGCCGGGATAA

Protein sequence

MTVPRKLNWSDLTADPIWSIEHVTLPKNRQSTTAHITEYDDGHVEVQFQEDEPRRPRIQEIMSSRPSVCSDTRTTTKGRPISRSKSMRTSVDFDQQVPDIQYEKSEGSISPTQTDMERKSGYIYIIKSTSQRGKRPIAQTSALPPMNADNYAMDLEFETVSRRRQGSSSRSLSRTGESRSQVSSSHISNRPSSPSTTSDSIPKRTQSYARTVKPAIFQARPQITSYHTKTSLEEAVIEPEFDGPTPQEACGQLYPRGFQFVPEDILKTRKGQFKTLNKVLKIKWWEKFDVSHLSEERISKFLKANPHHSRAEEEQLLLQRSSLISSLAGVSSTSELQTVIQGALQREDDNAPVQEGIPENDDIISESSVNDIEFEYDPYLNFDILDPYYDSQPG

Homology

[Close]

BLAST of Tan0013115 vs. NCBI nr
Match: KAA0038025.1 (Enzymatic polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 176.4 bits (446), Expect = 4.8e-40
Identity = 118/318 (37.11%), Postives = 171/318 (53.77%), Query Frame = 0


Query: 146 MNADNYAMDLEFETVSRRRQGSSSRSLSRTGESRS--QVSSSHISNRPSSPST------- 205
           M+A+NYAMDL+FE VSRRRQGS+ R+L+   +S S   + S+ +  RPS P+T       
Sbjct: 1   MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALL-RPSGPTTPNKRVAS 60

Query: 206 -----TSDSIPKRTQSYARTVKPAIFQARPQITSYHTKTSLEEAVIEPEFDGPTPQEACG 265
                +  +IP+   SY++ V+P IFQ RP I  Y TKT++ +  IEPEFDGP+ QE C 
Sbjct: 61  PAASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCS 120

Query: 266 QLYPRGFQFVPEDILKTRK----------------------------------------- 325
           Q++P GF F+PED+ KTR                                          
Sbjct: 121 QIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSY 180

Query: 326 ----------GQFKTLNKVLKIKWWEKFDVSHLSEERISKFLKANPH---HSRAEEEQLL 385
                     G FK L+K L+IKWWEKF+ SHL   +I  + KAN H    +R E+E  L
Sbjct: 181 WKQGMFLGPLGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFL 240

Query: 386 LQRSSLISSLAGVSSTSELQTVIQG-ALQREDDNAPVQEGIPENDDIISESSVNDI-EFE 394
           L +++++S+L G S+  E  +V+    +   DDN    + +PE+   +S +SVN++ + +
Sbjct: 241 LTKNAVMSTLVGASTQQEFNSVVNNVVVNLSDDN----DDLPED---VSPASVNNVDDLD 300

[Close]

BLAST of Tan0013115 vs. NCBI nr
Match: KAA0058437.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYJ96699.1 Retrotransposable element Tf2 [Cucumis melo var. makuwa])

HSP 1 Score: 171.8 bits (434), Expect = 1.2e-38
Identity = 108/271 (39.85%), Postives = 163/271 (60.15%), Query Frame = 0


Query: 146 MNADNYAMDLEFETVSRRRQGSSSRSLSRTGESRS--QVSSSHISNRPSSPST------- 205
           M+A+NY MDL+FE VSRRRQG + R+L+   +S S   + S+ +  RPS P+T       
Sbjct: 1   MSAENYTMDLQFEQVSRRRQGFAQRTLTIQSDSSSLPPIPSTALL-RPSGPTTPNKRAAS 60

Query: 206 -----TSDSIPKRTQSYARTVKPAIFQARPQITSYHTKTSLEEAVIEPEFDGPTPQEACG 265
                +S +IP+   SY++ V+P +FQ RP I  Y TKT++ +  IEPEFDGP+  E   
Sbjct: 61  PTASSSSSAIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTMVDLTIEPEFDGPSVYEVYN 120

Query: 266 QLYPRGFQFVPEDILKTRK-----GQFKTLNKVLKIKWWEKFDVSHLSEERISKFLKANP 325
           Q++P  F F+PED+ KTR      G+ ++  K L+IKWWEKF+ S+L  ++I  + KAN 
Sbjct: 121 QIFPHEFNFLPEDLAKTRTFYKSFGKLQSPEKSLRIKWWEKFNYSYLEVKKIKDWFKANI 180

Query: 326 H---HSRAEEEQLLLQRSSLISSLAGVSSTSELQTVIQG-ALQREDDNAPVQEGIPENDD 385
           H    +R E+E LL+ ++ ++S+L G S+  E  +V+    +   DDN      +PE+  
Sbjct: 181 HLQDMTRQEDEALLVTKNPIMSTLVGASTQQEFNSVVNNVVVNLSDDN----NDLPEDAS 240

Query: 386 IISESSVNDIEFEYDPYLNFDILDPYYDSQP 394
             S + V+D+  +YDPY   DI DP+ D+QP
Sbjct: 241 PASGNDVDDL--DYDPYEGLDINDPFLDTQP 264

[Close]

BLAST of Tan0013115 vs. NCBI nr
Match: KAA0058438.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 169.9 bits (429), Expect = 4.5e-38
Identity = 110/289 (38.06%), Postives = 163/289 (56.40%), Query Frame = 0


Query: 146 MNADNYAMDLEFETVSRRRQGSSSRSLSRTGESRS--QVSSSHISNRPSSPST------- 205
           M+A+NYAMDL+FE VSRRRQG + R+L+   +S S   + S+ + + PS P+T       
Sbjct: 1   MSAENYAMDLQFEQVSRRRQGFAQRTLTIQSDSSSLPPIPSTALLH-PSGPTTPNKHVAS 60

Query: 206 -----TSDSIPKRTQSYARTVKPAIFQARPQITSYHTKTSLEEAVIEPEFDGPTPQEACG 265
                +  SIP+   SY++ V+P +FQ RP I  Y TKT++ +  IEPEFDGP+  E C 
Sbjct: 61  PTASSSRSSIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTMVDLTIEPEFDGPSVHEVCN 120

Query: 266 QLYPRGFQFVPEDILKTR--------------------KGQFKTLNKVLKIKWWEKFDVS 325
           Q++P    F+P+D+  TR                     G FK L+K L+IKWWE  + S
Sbjct: 121 QIFPHELNFLPKDLANTRTFYEYILVDSNSAEITHLGPSGNFKALSKSLRIKWWENLNYS 180

Query: 326 HLSEERISKFLKANPH---HSRAEEEQLLLQRSSLISSLAGVSSTSELQTVIQGALQRED 385
           HL   +I  + KAN H    +R E+E LL+++++++S+LAG S+  E   V+        
Sbjct: 181 HLEVNKIKDWFKANIHLQDMTRQEDESLLVRKNAVMSTLAGASTQEEFNYVV-------- 240

Query: 386 DNAPVQEGIPENDDIISESS---VNDI-EFEYDPYLNFDILDPYYDSQP 394
            N  V   + +NDD+  ++S   VND+ + +YDPY   DI DP  D+QP
Sbjct: 241 -NNVVVNLLDDNDDLPEDASPTFVNDVDDLDYDPYKGLDINDPLLDTQP 279

[Close]

BLAST of Tan0013115 vs. NCBI nr
Match: KAA0050447.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 168.3 bits (425), Expect = 1.3e-37
Identity = 124/351 (35.33%), Postives = 178/351 (50.71%), Query Frame = 0


Query: 127 KSTSQRGKRPIAQTSALPPMNADNYAMDLEFETVSRRRQGSSSRSLSRTGESRS--QVSS 186
           ++T  RGK P AQ+SA  PM+A+NYAMDL+FE VSRRRQGS+ R+L+   +S S   + S
Sbjct: 36  ETTPSRGK-PSAQSSAHSPMSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPS 95

Query: 187 SHI---------SNRPSSPSTTS--DSIPKRTQSYARTVKPAIFQARPQITSYHTKTSLE 246
           + +         + R +SP+ +S   +I +   SY++ V+  +FQ RP I  Y TKT++ 
Sbjct: 96  TALLCPSGPTTPNKRVASPAASSSRSAISRNPSSYSQIVRLKVFQPRPPINGYFTKTTMV 155

Query: 247 EAVIEPEFDGPTPQEACGQLYPRGFQFVPEDILKTR------------------------ 306
           +  IEPEFDGP   E C Q++P  F F+PED+ KTR                        
Sbjct: 156 DLTIEPEFDGPFVHEVCNQIFPHEFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDP 215

Query: 307 ------------------------------------------KGQFKTLNKVLKIKWWEK 366
                                                      G FK L+K L IKWWEK
Sbjct: 216 SKIIYSKFRIFRVLTPSYWKQGMFVGRKFSHPFKPPSYNYRPSGNFKALSKSLIIKWWEK 275

Query: 367 FDVSHLSEERISKFLKANPH---HSRAEEEQLLLQRSSLISSLAGVSSTSELQTVIQG-A 394
           F+ SHL   +I  + KAN H    +R E+E  LL +++++S+LAG S+  E   V+    
Sbjct: 276 FNYSHLEVNKIKDWFKANIHLQNMTRQEDETFLLTKNAVMSTLAGASTQQEFNFVVNNVV 335

[Close]

BLAST of Tan0013115 vs. NCBI nr
Match: KAA0038028.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 164.5 bits (415), Expect = 1.9e-36
Identity = 117/345 (33.91%), Postives = 168/345 (48.70%), Query Frame = 0


Query: 146 MNADNYAMDLEFETVSRRRQGSSSRSLSRTGESRS--QVSSSHISNRPSSPST------- 205
           M+A+NYAMDL+FE VSRRRQGS+ R+L+   +S S   + S+ +  RPS P+T       
Sbjct: 1   MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALL-RPSGPTTPNKRAAS 60

Query: 206 -----TSDSIPKRTQSYARTVKPAIFQARPQITSYHTKTSLEEAVIEPEFDGPTPQEACG 265
                +   IP+   SY++ V+P IFQ RP I  Y TKT++ +  IEPEFDGP+ QE C 
Sbjct: 61  PAASSSRSVIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCS 120

Query: 266 QLYPRGFQFVPEDILKTRK----------------------------------------- 325
           Q++P GF F+PED+ KTR                                          
Sbjct: 121 QIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSY 180

Query: 326 -----------------------------------GQFKTLNKVLKIKWWEKFDVSHLSE 385
                                              G FK L+K L+IKWWEKF+ SHL  
Sbjct: 181 WKQGMFVGRKFSHPFKPPSYNYRDYTKAWYILGPLGNFKALSKSLRIKWWEKFNYSHLEV 240

Query: 386 ERISKFLKANPH---HSRAEEEQLLLQRSSLISSLAGVSSTSELQTVIQGALQREDDNAP 394
            +I  + KAN H    +R E+E  LL +++++S+L G S+  E  +V+   +    D   
Sbjct: 241 NKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLVGASTQQEFNSVVNNVVVNLSD--- 300

[Close]

BLAST of Tan0013115 vs. ExPASy TrEMBL
Match: A0A5A7T975 (Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G002220 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 2.3e-40
Identity = 118/318 (37.11%), Postives = 171/318 (53.77%), Query Frame = 0


Query: 146 MNADNYAMDLEFETVSRRRQGSSSRSLSRTGESRS--QVSSSHISNRPSSPST------- 205
           M+A+NYAMDL+FE VSRRRQGS+ R+L+   +S S   + S+ +  RPS P+T       
Sbjct: 1   MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALL-RPSGPTTPNKRVAS 60

Query: 206 -----TSDSIPKRTQSYARTVKPAIFQARPQITSYHTKTSLEEAVIEPEFDGPTPQEACG 265
                +  +IP+   SY++ V+P IFQ RP I  Y TKT++ +  IEPEFDGP+ QE C 
Sbjct: 61  PAASSSRSAIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCS 120

Query: 266 QLYPRGFQFVPEDILKTRK----------------------------------------- 325
           Q++P GF F+PED+ KTR                                          
Sbjct: 121 QIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSY 180

Query: 326 ----------GQFKTLNKVLKIKWWEKFDVSHLSEERISKFLKANPH---HSRAEEEQLL 385
                     G FK L+K L+IKWWEKF+ SHL   +I  + KAN H    +R E+E  L
Sbjct: 181 WKQGMFLGPLGNFKALSKSLRIKWWEKFNYSHLEVNKIKDWFKANIHLQDMTRQEDEAFL 240

Query: 386 LQRSSLISSLAGVSSTSELQTVIQG-ALQREDDNAPVQEGIPENDDIISESSVNDI-EFE 394
           L +++++S+L G S+  E  +V+    +   DDN    + +PE+   +S +SVN++ + +
Sbjct: 241 LTKNAVMSTLVGASTQQEFNSVVNNVVVNLSDDN----DDLPED---VSPASVNNVDDLD 300

[Close]

BLAST of Tan0013115 vs. ExPASy TrEMBL
Match: A0A5D3BCD5 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold535G00150 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 5.8e-39
Identity = 108/271 (39.85%), Postives = 163/271 (60.15%), Query Frame = 0


Query: 146 MNADNYAMDLEFETVSRRRQGSSSRSLSRTGESRS--QVSSSHISNRPSSPST------- 205
           M+A+NY MDL+FE VSRRRQG + R+L+   +S S   + S+ +  RPS P+T       
Sbjct: 1   MSAENYTMDLQFEQVSRRRQGFAQRTLTIQSDSSSLPPIPSTALL-RPSGPTTPNKRAAS 60

Query: 206 -----TSDSIPKRTQSYARTVKPAIFQARPQITSYHTKTSLEEAVIEPEFDGPTPQEACG 265
                +S +IP+   SY++ V+P +FQ RP I  Y TKT++ +  IEPEFDGP+  E   
Sbjct: 61  PTASSSSSAIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTMVDLTIEPEFDGPSVYEVYN 120

Query: 266 QLYPRGFQFVPEDILKTRK-----GQFKTLNKVLKIKWWEKFDVSHLSEERISKFLKANP 325
           Q++P  F F+PED+ KTR      G+ ++  K L+IKWWEKF+ S+L  ++I  + KAN 
Sbjct: 121 QIFPHEFNFLPEDLAKTRTFYKSFGKLQSPEKSLRIKWWEKFNYSYLEVKKIKDWFKANI 180

Query: 326 H---HSRAEEEQLLLQRSSLISSLAGVSSTSELQTVIQG-ALQREDDNAPVQEGIPENDD 385
           H    +R E+E LL+ ++ ++S+L G S+  E  +V+    +   DDN      +PE+  
Sbjct: 181 HLQDMTRQEDEALLVTKNPIMSTLVGASTQQEFNSVVNNVVVNLSDDN----NDLPEDAS 240

Query: 386 IISESSVNDIEFEYDPYLNFDILDPYYDSQP 394
             S + V+D+  +YDPY   DI DP+ D+QP
Sbjct: 241 PASGNDVDDL--DYDPYEGLDINDPFLDTQP 264

[Close]

BLAST of Tan0013115 vs. ExPASy TrEMBL
Match: A0A5A7UTF1 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold132G00210 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.2e-38
Identity = 110/289 (38.06%), Postives = 163/289 (56.40%), Query Frame = 0


Query: 146 MNADNYAMDLEFETVSRRRQGSSSRSLSRTGESRS--QVSSSHISNRPSSPST------- 205
           M+A+NYAMDL+FE VSRRRQG + R+L+   +S S   + S+ + + PS P+T       
Sbjct: 1   MSAENYAMDLQFEQVSRRRQGFAQRTLTIQSDSSSLPPIPSTALLH-PSGPTTPNKHVAS 60

Query: 206 -----TSDSIPKRTQSYARTVKPAIFQARPQITSYHTKTSLEEAVIEPEFDGPTPQEACG 265
                +  SIP+   SY++ V+P +FQ RP I  Y TKT++ +  IEPEFDGP+  E C 
Sbjct: 61  PTASSSRSSIPRNPSSYSQIVRPKVFQPRPPINGYFTKTTMVDLTIEPEFDGPSVHEVCN 120

Query: 266 QLYPRGFQFVPEDILKTR--------------------KGQFKTLNKVLKIKWWEKFDVS 325
           Q++P    F+P+D+  TR                     G FK L+K L+IKWWE  + S
Sbjct: 121 QIFPHELNFLPKDLANTRTFYEYILVDSNSAEITHLGPSGNFKALSKSLRIKWWENLNYS 180

Query: 326 HLSEERISKFLKANPH---HSRAEEEQLLLQRSSLISSLAGVSSTSELQTVIQGALQRED 385
           HL   +I  + KAN H    +R E+E LL+++++++S+LAG S+  E   V+        
Sbjct: 181 HLEVNKIKDWFKANIHLQDMTRQEDESLLVRKNAVMSTLAGASTQEEFNYVV-------- 240

Query: 386 DNAPVQEGIPENDDIISESS---VNDI-EFEYDPYLNFDILDPYYDSQP 394
            N  V   + +NDD+  ++S   VND+ + +YDPY   DI DP  D+QP
Sbjct: 241 -NNVVVNLLDDNDDLPEDASPTFVNDVDDLDYDPYKGLDINDPLLDTQP 279

[Close]

BLAST of Tan0013115 vs. ExPASy TrEMBL
Match: A0A5A7U7T9 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00530 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.4e-38
Identity = 124/351 (35.33%), Postives = 178/351 (50.71%), Query Frame = 0


Query: 127 KSTSQRGKRPIAQTSALPPMNADNYAMDLEFETVSRRRQGSSSRSLSRTGESRS--QVSS 186
           ++T  RGK P AQ+SA  PM+A+NYAMDL+FE VSRRRQGS+ R+L+   +S S   + S
Sbjct: 36  ETTPSRGK-PSAQSSAHSPMSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPS 95

Query: 187 SHI---------SNRPSSPSTTS--DSIPKRTQSYARTVKPAIFQARPQITSYHTKTSLE 246
           + +         + R +SP+ +S   +I +   SY++ V+  +FQ RP I  Y TKT++ 
Sbjct: 96  TALLCPSGPTTPNKRVASPAASSSRSAISRNPSSYSQIVRLKVFQPRPPINGYFTKTTMV 155

Query: 247 EAVIEPEFDGPTPQEACGQLYPRGFQFVPEDILKTR------------------------ 306
           +  IEPEFDGP   E C Q++P  F F+PED+ KTR                        
Sbjct: 156 DLTIEPEFDGPFVHEVCNQIFPHEFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDP 215

Query: 307 ------------------------------------------KGQFKTLNKVLKIKWWEK 366
                                                      G FK L+K L IKWWEK
Sbjct: 216 SKIIYSKFRIFRVLTPSYWKQGMFVGRKFSHPFKPPSYNYRPSGNFKALSKSLIIKWWEK 275

Query: 367 FDVSHLSEERISKFLKANPH---HSRAEEEQLLLQRSSLISSLAGVSSTSELQTVIQG-A 394
           F+ SHL   +I  + KAN H    +R E+E  LL +++++S+LAG S+  E   V+    
Sbjct: 276 FNYSHLEVNKIKDWFKANIHLQNMTRQEDETFLLTKNAVMSTLAGASTQQEFNFVVNNVV 335

[Close]

BLAST of Tan0013115 vs. ExPASy TrEMBL
Match: A0A5A7T5B0 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G002250 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 9.2e-37
Identity = 117/345 (33.91%), Postives = 168/345 (48.70%), Query Frame = 0


Query: 146 MNADNYAMDLEFETVSRRRQGSSSRSLSRTGESRS--QVSSSHISNRPSSPST------- 205
           M+A+NYAMDL+FE VSRRRQGS+ R+L+   +S S   + S+ +  RPS P+T       
Sbjct: 1   MSAENYAMDLQFEQVSRRRQGSAQRTLTIQSDSSSLPPIPSTALL-RPSGPTTPNKRAAS 60

Query: 206 -----TSDSIPKRTQSYARTVKPAIFQARPQITSYHTKTSLEEAVIEPEFDGPTPQEACG 265
                +   IP+   SY++ V+P IFQ RP I  Y TKT++ +  IEPEFDGP+ QE C 
Sbjct: 61  PAASSSRSVIPRNPSSYSQIVRPKIFQPRPPINGYFTKTTMVDLTIEPEFDGPSVQEVCS 120

Query: 266 QLYPRGFQFVPEDILKTRK----------------------------------------- 325
           Q++P GF F+PED+ KTR                                          
Sbjct: 121 QIFPHGFNFLPEDLSKTRTFYEYILVDSKSAEITHVPDKNDPSKIIYSKLRIFRVLTPSY 180

Query: 326 -----------------------------------GQFKTLNKVLKIKWWEKFDVSHLSE 385
                                              G FK L+K L+IKWWEKF+ SHL  
Sbjct: 181 WKQGMFVGRKFSHPFKPPSYNYRDYTKAWYILGPLGNFKALSKSLRIKWWEKFNYSHLEV 240

Query: 386 ERISKFLKANPH---HSRAEEEQLLLQRSSLISSLAGVSSTSELQTVIQGALQREDDNAP 394
            +I  + KAN H    +R E+E  LL +++++S+L G S+  E  +V+   +    D   
Sbjct: 241 NKIKDWFKANIHLQDMTRQEDEAFLLTKNAVMSTLVGASTQQEFNSVVNNVVVNLSD--- 300

The following BLAST results are available for this feature:

BLAST of Tan0013115 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0013115 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0038025.1	4.8e-40	37.11	Enzymatic polyprotein [Cucumis melo var. makuwa]	[more]
KAA0058437.1	1.2e-38	39.85	Retrotransposable element Tf2 [Cucumis melo var. makuwa] >TYJ96699.1 Retrotransp...	[more]
KAA0058438.1	4.5e-38	38.06	polyprotein [Cucumis melo var. makuwa]	[more]
KAA0050447.1	1.3e-37	35.33	polyprotein [Cucumis melo var. makuwa]	[more]
KAA0038028.1	1.9e-36	33.91	polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Tan0013115 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T975	2.3e-40	37.11	Enzymatic polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36...	[more]
A0A5D3BCD5	5.8e-39	39.85	Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7UTF1	2.2e-38	38.06	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold132G00210 PE...	[more]
A0A5A7U7T9	6.4e-38	35.33	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00530 PE...	[more]
A0A5A7T5B0	9.2e-37	33.91	Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G002250 PE...	[more]

BLAST of Tan0013115 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..205
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..205
None	No IPR available	PANTHER	PTHR46249:SF33	VIRAL MOVEMENT PROTEIN-RELATED	coord: 3..123
None	No IPR available	PANTHER	PTHR46249	FAMILY NOT NAMED	coord: 3..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0013115.1	Tan0013115.1	mRNA