
Tan0013046 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCAAATAAAGAATAATTTCGAGGAAAGGAGGATCGCAAGGATGTAAAGTTTTTCAAAGAAAACACCTCTACATATATGGAATGGAAGCCAAGATTGCTTTTATATCGATTACCGCCCCCTCCTTCTCTTCCTCTTTCTCCCTTTTCTTCCCCCATTTTTCCCTCATCTGTTTCTTCGTCTCTGCAAATTTCTTGCGCTTCCTCTTCCGATCGTTCCGCTCCATCAGCAGTTCGCCGTTCCGTCTTCCGCCAGGTACGATACGATCTCCGTTACTATTTTGTTCATGCTACTGTTTTATTGCTTCAAATCATGCTTGTTTTCCCTGATTTATTGCCTGTCATCTCCGTCTGGTGTTTGTTTTTGGTATTCCCATTCGGTTTGATCGTATTTGTGGTTCTCTGTATGTCTTCGATTTCGACCTTTCTTCGTGCTTCGGGCGAGGTTTCGAGTTCTTAACTATTGAATAATAGACAGTTGGAGGTTTTAGCACGTTTGGTTCAGATTCAAGAAGCTAATTCTTTGAATAGTTCGTACTAACGGTTCAATTTCGTTTAGGGTTTATACCTTTTTTTTGTTTGTTTGTATGGTTCGGTTTAGGTAGTGAATTTTTTAACGACGTATTAACTAAATTAGGGGCTTTATTTTTAAAGAATATTTTCAGGAGCCGTGATTGGGGGAAAGTAATACTGTGTGTTCTTTTAAGCCGTAATAGTTCTGCCCTGGATGGATTGGGTTTTTATAAAATGTCGATTTAGACAGTGGTAAAGAGTTTGATTGGCATTCCGCTATTCTTAGATCACGTCTGGCTCTTTTTATAACCTTTTTTTTTTGTTTTTTGTTTTAAAAAAAAACAATGCATTATCATAGAACGTTCTTCATTTTTACTAATCCAATTCCGTAAACGTTTTTAAATTATAGCAGAATTTTAATAAACAAAAAAAGGTAAAATTTAGAATTTCTTTATGTTTCTAAAAATTGGCTAAGTTTTTTTATTTTTTTTATTTTTATTTTTATAAATTAAATAGATTTTCAATTGGGTATCCGACTAATATTCCAACTTGATGGTAATTTCGTCTTTGTAATCATTCACTAAGAACAGGTCGATGATGCGCAAAGGAAAAAAAAATTATTTATCTTTTTTCAGTTTTGAATGTATAACTCAATTATTCAATTCATCGTGGACTTCTTGGGAATTACATTAAGACATTTCAAAGGTATTTAGATCTGAATTACTTCTTCATTTCTGTGGATGATTCTATTTTTGTAGGTTTGAAAGATAAAAAAAGGCTGTTGGAATGAGCTTTCAAAGTAGAAATGATCTACAGGAATGGAGTGCAAGAGTTGTTGAGCGAAGAACAGTAATGGACTTCGACCTAAATTGTCCACCTCCAGATGAGTGCATTAATCCAACTGGCCATCATGAGGAAGCAGCACAATACTACAATCATTACCAAGGACAAGCTATGGACAATCCCGGCTTTGTCGACGAGGACATTGCTATTATCTCTCCTAGGAAATTTGCTGAAGTATGTGATATTTTGGGCAAAGAATATGAGTGTTTCTAAATTCTAACTAGGCCATATAAGGGGAGGATCTAACATGGTGTCGAATTTTTTTAGGCCAGGAAGAATTTTCGAAGAAACCACTTTGAGAGTACCTGTGGTGTAGCCGTCAGACGTAATGGCAACACAGAAGTTTATGGTGCTCTTGCAGGTTTATTGCCTTTTCTTTATATAAGTCTTAAACTTCTCTATTTGTGTTTCAATTGTTGATTATCTCTCAGAGAGTACATTGCCATTTCCCAATATTTTCTGCTTTTCTGGCGAATTTGAGATATTCATTGAGGATGTACTCGCATTCTTGGATTTTTCTTAACTTACCTTTTCACAGTCTGGCGAATCTTCTATATTCTGGATTCACAAGACTGCTTGAATAAAATTGTGGTGCATATTGTGATTATATTTGGTTGGGTAAGAAGAGTTTTAGTCTCATGAAATTAAATTTCCAAGTTCTTAGCATGCAGGATGTTGTGTTAAAGTTTTTCAAAGTTTGTAAGCTTCCTCAGGATATAACCAAACCTTGGTACTTAGCTTACAGAACAGTCTTGGGCGTTTAATTTAATTTTTACTCATAATCATATGTTCACTACTTGTTTATGGGGTTTTAGACTATTGTTCCTCCAGGATATAACCAAACCTTGGTACTTAGCTTAGCATGCAGGATGTTGTGTTAAAGTTTTTCAAAGTTTGTAAGCTTCCTCAGGATATAACCAAACCTTGGTACTTAGCTTACAGAACAGTCTTGGGCGTTTAATTTAATTTTTACTCATAATCATATGTTCACTACTTGTTTATGGGGTTTTAGACTATTGTTCCTCCAGTCTTTGCTGATCAATCTGTCCAACTTCATTTGCATCCAATTGTGGATCTTTGTACTTGGAGAATTTGATTTTTTCCACACACATTCCACTATAAACTTCAAATAATTATTTTGATTGCAGTCATTAGTGAGATTAATCAACAGATTTATTATTGTTTGTTACTCTTGCCAATCTGCATATGTTTTCTTACTAACCTGTCTTCAAATATTTTGCAGATGTAGCAAGTTGGCCCCCTTTTACAATTTGGCCGTCTCTTACAATTAGCAATAACAACGTATCCATACAGGAACAAACGATTCACAACTTGGACCTTTGCTTAAGCTGTGAAAGCAGTAGTAGGGCCACTAAGGTAATACTGATTTAATGGTTATTTTTTGGTTTCAAATTTTGGGGTTGCCTGTTCATTGTCCAAAATCTTTGGCTACCATTTTATCTGTCTATATTGAAACTGAATATATATGTGTTTTGAAGAATTCTGTCCCCTTTCGAGAAAAATTTGATAATTGATTTCTGTTTTAGTGGTTGTATACTAGAGATTTATTATTTATTTTTCTTTTTCTACACAGAAGTATTAGCCAATGGAATAAAAAATGAAAAAGAACTTTTTGGAACAACCTTTTTTAGTTTTAAATGAACTTTAGCTAACTAGTTCTTTTAATAGAAAACTTAAATAAAATCATTATAAATGAGAAAGTGCAACAGAAGGTGATCAATTCATCTCCTAGCTATCAATTAGATGGTAGAATTATGGCAACGAGCAGCTCTAGGAAAATCTCCATAAAAGCTGAAGTTCTTTGGATTAATCGCTTATAAATTTGGATTATCCTTTACATGCCGTGCCCTTCTCTAGTGCAAACATCCCAACCGATCTGTTCAAATTTTTCTAGAATAGTTTTTTCTCCTGCAGACGCTGTCATTCTGCTGTGACTTATAATATGATCTCCATCGAATTTGCTTCATCTTGTGCAAGTTTCTGTTAGGGCCATATATTTTTCTTGGCCAAAGATTGCCATTGACGTGATGGAATCAAATTTGTAATCACTAGCTTGACTCATTTGTTGAAAAAACTATTCAATGTTGCTGGGCACCCTTTGAATCGTTAGATGTAGGATGAAACCACAATATTTAGTTTCTCTCTACCATATCCAACGGAAAAAAATTGTCAGCCACATTGTACTAGTCTTCTTGAATAACTTAATAATTTGCCCCGTCGATGGGCGATTACCATTGGCACGGAGCTTTGGCCAATGGTTTGAGCGAACCCTTAACCAGCTTCAAAACCACCAAGTATTTAAGGTTCAGTGCCTTGTGAGGTTATATCTGAAGTAGATGTCTGATGTTTCTCAATCTTATGTAATTCACTTGGACTTTGCTAGTAACTACATCATTTAAATATCTGATGATTAACATCATTTTCCCATCCTTATTTCTTAGAGCTTGAAACTAAATTGTAAATTCCTTATTGCAGGCAACAATTGATGACACTGACATTCCTTCTGCACTTGCACAAAGTAGTAGTAGCATCCCACCTGCAGCAGCCCCGAGTTTGCGGTGCGCGATCTGCATAGAACCATTGGTTGAAGAAACAACAACCAAATGCGGGCACGTTTTCTGCAGGAATTGCATAGAAACGGCCATAGCTACCCAGCACAGATGTCCCATATGTCGGCGTAAGCTTAGAAAACGAGATATTATCCGGATTTACCTTCCCTTTTCAACATGAAAAAAGAATGAATACAACACAAGAATATTGCATCTGTATTCTTTTTCTGATGATGATGATGATGATTTAGGTTTGTACTACTACTTGCACACAGTTGCATTAACAAGTATAGATTTCTTTCATTTCTTTCTTTCTTTCTTTCTTTCTTCTTCATCATCTGTATTGAATGAGAACTATAAACAAAAATTAAAAGCTCTTTGGTGAGGTGTTTGTATTTGACTGAAAAAAGACAGGCGGTTGGTTGATTCATTAAAAATAGTTTATTGATTAATTAGAAGGGGAATGAATTTATGGCTCTGTTTTGTGTT GCAAATAAAGAATAATTTCGAGGAAAGGAGGATCGCAAGGATGTAAAGTTTTTCAAAGAAAACACCTCTACATATATGGAATGGAAGCCAAGATTGCTTTTATATCGATTACCGCCCCCTCCTTCTCTTCCTCTTTCTCCCTTTTCTTCCCCCATTTTTCCCTCATCTGTTTCTTCGTCTCTGCAAATTTCTTGCGCTTCCTCTTCCGATCGTTCCGCTCCATCAGCAGTTCGCCGTTCCGTCTTCCGCCAGGTTTGAAAGATAAAAAAAGGCTGTTGGAATGAGCTTTCAAAGTAGAAATGATCTACAGGAATGGAGTGCAAGAGTTGTTGAGCGAAGAACAGTAATGGACTTCGACCTAAATTGTCCACCTCCAGATGAGTGCATTAATCCAACTGGCCATCATGAGGAAGCAGCACAATACTACAATCATTACCAAGGACAAGCTATGGACAATCCCGGCTTTGTCGACGAGGACATTGCTATTATCTCTCCTAGGAAATTTGCTGAAGCCAGGAAGAATTTTCGAAGAAACCACTTTGAGAGTACCTGTGGTGTAGCCGTCAGACGTAATGGCAACACAGAAGTTTATGGTGCTCTTGCAGATGTAGCAAGTTGGCCCCCTTTTACAATTTGGCCGTCTCTTACAATTAGCAATAACAACGTATCCATACAGGAACAAACGATTCACAACTTGGACCTTTGCTTAAGCTGTGAAAGCAGTAGTAGGGCCACTAAGGCAACAATTGATGACACTGACATTCCTTCTGCACTTGCACAAAGTAGTAGTAGCATCCCACCTGCAGCAGCCCCGAGTTTGCGGTGCGCGATCTGCATAGAACCATTGGTTGAAGAAACAACAACCAAATGCGGGCACGTTTTCTGCAGGAATTGCATAGAAACGGCCATAGCTACCCAGCACAGATGTCCCATATGTCGGCGTAAGCTTAGAAAACGAGATATTATCCGGATTTACCTTCCCTTTTCAACATGAAAAAAGAATGAATACAACACAAGAATATTGCATCTGTATTCTTTTTCTGATGATGATGATGATGATTTAGGTTTGTACTACTACTTGCACACAGTTGCATTAACAAGTATAGATTTCTTTCATTTCTTTCTTTCTTTCTTTCTTTCTTCTTCATCATCTGTATTGAATGAGAACTATAAACAAAAATTAAAAGCTCTTTGGTGAGGTGTTTGTATTTGACTGAAAAAAGACAGGCGGTTGGTTGATTCATTAAAAATAGTTTATTGATTAATTAGAAGGGGAATGAATTTATGGCTCTGTTTTGTGTT ATGAGCTTTCAAAGTAGAAATGATCTACAGGAATGGAGTGCAAGAGTTGTTGAGCGAAGAACAGTAATGGACTTCGACCTAAATTGTCCACCTCCAGATGAGTGCATTAATCCAACTGGCCATCATGAGGAAGCAGCACAATACTACAATCATTACCAAGGACAAGCTATGGACAATCCCGGCTTTGTCGACGAGGACATTGCTATTATCTCTCCTAGGAAATTTGCTGAAGCCAGGAAGAATTTTCGAAGAAACCACTTTGAGAGTACCTGTGGTGTAGCCGTCAGACGTAATGGCAACACAGAAGTTTATGGTGCTCTTGCAGATGTAGCAAGTTGGCCCCCTTTTACAATTTGGCCGTCTCTTACAATTAGCAATAACAACGTATCCATACAGGAACAAACGATTCACAACTTGGACCTTTGCTTAAGCTGTGAAAGCAGTAGTAGGGCCACTAAGGCAACAATTGATGACACTGACATTCCTTCTGCACTTGCACAAAGTAGTAGTAGCATCCCACCTGCAGCAGCCCCGAGTTTGCGGTGCGCGATCTGCATAGAACCATTGGTTGAAGAAACAACAACCAAATGCGGGCACGTTTTCTGCAGGAATTGCATAGAAACGGCCATAGCTACCCAGCACAGATGTCCCATATGTCGGCGTAAGCTTAGAAAACGAGATATTATCCGGATTTACCTTCCCTTTTCAACATGA MSFQSRNDLQEWSARVVERRTVMDFDLNCPPPDECINPTGHHEEAAQYYNHYQGQAMDNPGFVDEDIAIISPRKFAEARKNFRRNHFESTCGVAVRRNGNTEVYGALADVASWPPFTIWPSLTISNNNVSIQEQTIHNLDLCLSCESSSRATKATIDDTDIPSALAQSSSSIPPAAAPSLRCAICIEPLVEETTTKCGHVFCRNCIETAIATQHRCPICRRKLRKRDIIRIYLPFST Homology
BLAST of Tan0013046 vs. ExPASy Swiss-Prot
Match: Q95KF1 (E3 ubiquitin-protein ligase RNF125 OS=Macaca fascicularis OX=9541 GN=RNF125 PE=2 SV=3) HSP 1 Score: 51.6 bits (122), Expect = 1.4e-05 Identity = 28/73 (38.36%), Postives = 38/73 (52.05%), Query Frame = 0
BLAST of Tan0013046 vs. ExPASy Swiss-Prot
Match: Q96EQ8 (E3 ubiquitin-protein ligase RNF125 OS=Homo sapiens OX=9606 GN=RNF125 PE=1 SV=4) HSP 1 Score: 50.4 bits (119), Expect = 3.1e-05 Identity = 23/52 (44.23%), Postives = 31/52 (59.62%), Query Frame = 0
BLAST of Tan0013046 vs. ExPASy Swiss-Prot
Match: Q9D9R0 (E3 ubiquitin-protein ligase RNF125 OS=Mus musculus OX=10090 GN=Rnf125 PE=2 SV=3) HSP 1 Score: 50.4 bits (119), Expect = 3.1e-05 Identity = 32/83 (38.55%), Postives = 44/83 (53.01%), Query Frame = 0
BLAST of Tan0013046 vs. ExPASy Swiss-Prot
Match: Q1L5Z9 (LON peptidase N-terminal domain and RING finger protein 2 OS=Homo sapiens OX=9606 GN=LONRF2 PE=1 SV=3) HSP 1 Score: 49.3 bits (116), Expect = 7.0e-05 Identity = 19/42 (45.24%), Postives = 25/42 (59.52%), Query Frame = 0
BLAST of Tan0013046 vs. ExPASy Swiss-Prot
Match: Q6LFN2 (RING finger protein PFF0165c OS=Plasmodium falciparum (isolate 3D7) OX=36329 GN=PFF0165c PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 7.0e-05 Identity = 21/55 (38.18%), Postives = 34/55 (61.82%), Query Frame = 0
BLAST of Tan0013046 vs. NCBI nr
Match: XP_022147116.1 (E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like [Momordica charantia] >XP_022147117.1 E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like [Momordica charantia]) HSP 1 Score: 414.5 bits (1064), Expect = 6.3e-112 Identity = 209/238 (87.82%), Postives = 218/238 (91.60%), Query Frame = 0
BLAST of Tan0013046 vs. NCBI nr
Match: XP_023540616.1 (uncharacterized protein LOC111800927 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 406.0 bits (1042), Expect = 2.3e-109 Identity = 202/235 (85.96%), Postives = 214/235 (91.06%), Query Frame = 0
BLAST of Tan0013046 vs. NCBI nr
Match: XP_022935007.1 (uncharacterized protein LOC111441975 [Cucurbita moschata]) HSP 1 Score: 405.6 bits (1041), Expect = 2.9e-109 Identity = 202/235 (85.96%), Postives = 213/235 (90.64%), Query Frame = 0
BLAST of Tan0013046 vs. NCBI nr
Match: KAG7028749.1 (hypothetical protein SDJN02_09930, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 405.6 bits (1041), Expect = 2.9e-109 Identity = 202/235 (85.96%), Postives = 213/235 (90.64%), Query Frame = 0
BLAST of Tan0013046 vs. NCBI nr
Match: XP_022974776.1 (E3 ubiquitin-protein ligase BRE1-like [Cucurbita maxima]) HSP 1 Score: 399.1 bits (1024), Expect = 2.8e-107 Identity = 199/235 (84.68%), Postives = 214/235 (91.06%), Query Frame = 0
BLAST of Tan0013046 vs. ExPASy TrEMBL
Match: A0A6J1D1D9 (E3 ubiquitin-protein ligase complex slx8-rfp subunit slx8-like OS=Momordica charantia OX=3673 GN=LOC111016128 PE=4 SV=1) HSP 1 Score: 414.5 bits (1064), Expect = 3.1e-112 Identity = 209/238 (87.82%), Postives = 218/238 (91.60%), Query Frame = 0
BLAST of Tan0013046 vs. ExPASy TrEMBL
Match: A0A6J1F4D6 (uncharacterized protein LOC111441975 OS=Cucurbita moschata OX=3662 GN=LOC111441975 PE=4 SV=1) HSP 1 Score: 405.6 bits (1041), Expect = 1.4e-109 Identity = 202/235 (85.96%), Postives = 213/235 (90.64%), Query Frame = 0
BLAST of Tan0013046 vs. ExPASy TrEMBL
Match: A0A6J1ICB2 (E3 ubiquitin-protein ligase BRE1-like OS=Cucurbita maxima OX=3661 GN=LOC111473500 PE=4 SV=1) HSP 1 Score: 399.1 bits (1024), Expect = 1.3e-107 Identity = 199/235 (84.68%), Postives = 214/235 (91.06%), Query Frame = 0
BLAST of Tan0013046 vs. ExPASy TrEMBL
Match: A0A0A0L424 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G130260 PE=4 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 8.4e-102 Identity = 194/238 (81.51%), Postives = 209/238 (87.82%), Query Frame = 0
BLAST of Tan0013046 vs. ExPASy TrEMBL
Match: A0A5A7U158 (E3 ubiquitin-protein ligase RNF4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002840 PE=4 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 1.4e-101 Identity = 195/238 (81.93%), Postives = 208/238 (87.39%), Query Frame = 0
BLAST of Tan0013046 vs. TAIR 10
Match: AT5G48655.2 (RING/U-box superfamily protein ) HSP 1 Score: 88.6 bits (218), Expect = 7.4e-18 Identity = 61/216 (28.24%), Postives = 98/216 (45.37%), Query Frame = 0
BLAST of Tan0013046 vs. TAIR 10
Match: AT5G48655.1 (RING/U-box superfamily protein ) HSP 1 Score: 88.6 bits (218), Expect = 7.4e-18 Identity = 61/216 (28.24%), Postives = 98/216 (45.37%), Query Frame = 0
BLAST of Tan0013046 vs. TAIR 10
Match: AT5G48655.3 (RING/U-box superfamily protein ) HSP 1 Score: 88.6 bits (218), Expect = 7.4e-18 Identity = 61/216 (28.24%), Postives = 98/216 (45.37%), Query Frame = 0
BLAST of Tan0013046 vs. TAIR 10
Match: AT3G07200.1 (RING/U-box superfamily protein ) HSP 1 Score: 80.5 bits (197), Expect = 2.0e-15 Identity = 35/91 (38.46%), Postives = 57/91 (62.64%), Query Frame = 0
BLAST of Tan0013046 vs. TAIR 10
Match: AT3G07200.2 (RING/U-box superfamily protein ) HSP 1 Score: 80.5 bits (197), Expect = 2.0e-15 Identity = 35/91 (38.46%), Postives = 57/91 (62.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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