Tan0013033 (gene) Snake gourd v1

Overview
NameTan0013033
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
DescriptionGATA transcription factor 29-like
LocationLG07: 10871690 .. 10873005 (+)
RNA-Seq ExpressionTan0013033
SyntenyTan0013033
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAACAATCATGGGATGGCGTCGTGCGGAGGCAGAAATGGTGAGATGATGATGAGTGAAGGAAATTACAACCCTCACCAAATTGTATGGTCAAAAGAGCTGAAAACCTATGTTCTTAATTCAAATAATTACGAGCAGCTGATGCCCATTGGCAGCACTGCAAATAACAACATGATAGCAGCCAATCTTCATATTCCTCTTCAAAAGAACAATAATAATAATAATGACCTCTACACACTCCTCAACCCTGCTTCTAGAATCACCGATGATCAACAAGAAGCCGATGCTTCCTCCAGTGCCCGCCGGAAAGGTACACGGCGGCGCCGAGTTTCCTCCTGCAACGAGGCCGAGAAGAGGTGCACCAATTACAATTGCAACACCACTTTTACACCCATGTGGCGTAAAGGCCCTCTTGGTCCCAAGGTACACAATTTATTAATTGCAACAAACAAAACAAAATAGGTAGCTAGGTTTATATAAGTTAAGAATTTTGTTTGAACTTCCACTTTTATCATATTTGAAATCACTCCGAATCATGCTTTTAATTATTTAAAATCAATTTTTATATTTGAAAATCGCTTTTGAAAGTGTAAAATTAAACATTAAGATACGGTTTGATAACTATTTGCTTTCTAAAAATTATGTTTGTGTTTTCATAATTTCTCTTTATTTTCTCCATAATGATTTCAATCTTTCTTAAGAAACTATTAGAGTCAAATTTTAAAAATAAAAATGGAAAACTATTTTTTTTTTTAGTTTTCAAAACTTAGTTTAGTTTTTGAAAACACGGGTAAAAAGTAGATATGAAAACATAAAAACCATAAGTAGAAGTAGTATTTTTAAGCTTAATTAATTTTTAAAAATTAATTAAAACGAAACCTAAACTATTTTAAATGATTAAAAACATGTATCACATGACAATAGTGATTTTGACCCTTTCAAAATTACTCTAAAAATATTCTAAATTATTATGGAATATCAACGGTTGTAAGTAAGTATTAATCTCAAAAGACTAAAATTTTAAAAATTTTAAGTAGCATATATAAAATTATAAACTAATTAATTAGAGCTAATTGATAGATTAAAAATAATTAATTAATGGATCAGTAGCTTAAAAAAATTTGATGGGTGAATCTCTCACTCTGGGTAGAATTAAAAAAAAAAGGAAGCTAATTAATTAAAATGCATGTAATGGTGGATTAATAATAATATTGCAGAGCCTTTGCAATGCATGCGGCATAAGGTACAGAAAGGAAACGTTGAATCGGGAAGCAATGGCGGCAGAAAACAGCCACAGCCACAGCCACAGCTAG

mRNA sequence

ATGGTGAACAATCATGGGATGGCGTCGTGCGGAGGCAGAAATGGTGAGATGATGATGAGTGAAGGAAATTACAACCCTCACCAAATTGTATGGTCAAAAGAGCTGAAAACCTATGTTCTTAATTCAAATAATTACGAGCAGCTGATGCCCATTGGCAGCACTGCAAATAACAACATGATAGCAGCCAATCTTCATATTCCTCTTCAAAAGAACAATAATAATAATAATGACCTCTACACACTCCTCAACCCTGCTTCTAGAATCACCGATGATCAACAAGAAGCCGATGCTTCCTCCAGTGCCCGCCGGAAAGGTACACGGCGGCGCCGAGTTTCCTCCTGCAACGAGGCCGAGAAGAGGTGCACCAATTACAATTGCAACACCACTTTTACACCCATGTGGCGTAAAGGCCCTCTTGGTCCCAAGAGCCTTTGCAATGCATGCGGCATAAGGTACAGAAAGGAAACGTTGAATCGGGAAGCAATGGCGGCAGAAAACAGCCACAGCCACAGCCACAGCTAG

Coding sequence (CDS)

ATGGTGAACAATCATGGGATGGCGTCGTGCGGAGGCAGAAATGGTGAGATGATGATGAGTGAAGGAAATTACAACCCTCACCAAATTGTATGGTCAAAAGAGCTGAAAACCTATGTTCTTAATTCAAATAATTACGAGCAGCTGATGCCCATTGGCAGCACTGCAAATAACAACATGATAGCAGCCAATCTTCATATTCCTCTTCAAAAGAACAATAATAATAATAATGACCTCTACACACTCCTCAACCCTGCTTCTAGAATCACCGATGATCAACAAGAAGCCGATGCTTCCTCCAGTGCCCGCCGGAAAGGTACACGGCGGCGCCGAGTTTCCTCCTGCAACGAGGCCGAGAAGAGGTGCACCAATTACAATTGCAACACCACTTTTACACCCATGTGGCGTAAAGGCCCTCTTGGTCCCAAGAGCCTTTGCAATGCATGCGGCATAAGGTACAGAAAGGAAACGTTGAATCGGGAAGCAATGGCGGCAGAAAACAGCCACAGCCACAGCCACAGCTAG

Protein sequence

MVNNHGMASCGGRNGEMMMSEGNYNPHQIVWSKELKTYVLNSNNYEQLMPIGSTANNNMIAANLHIPLQKNNNNNNDLYTLLNPASRITDDQQEADASSSARRKGTRRRRVSSCNEAEKRCTNYNCNTTFTPMWRKGPLGPKSLCNACGIRYRKETLNREAMAAENSHSHSHS
Homology
[Close]
BLAST of Tan0013033 vs. ExPASy Swiss-Prot
Match: Q9LT45 (GATA transcription factor 29 OS=Arabidopsis thaliana OX=3702 GN=GATA29 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.3e-11
Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 0 

Query: 76  NDLYTLLN-PASRITDDQQEADASSSARRKGTRRRRVSSCN-------EAEKRCTNYNCN 135
           +D Y L++ PA R    +  +   +++ ++    +R+  C        E  K+CTN NCN
Sbjct: 108 SDEYVLIDVPARRAR--RNNSTVMTNSWKENATPKRIRGCGGFCGGRIEGMKKCTNMNCN 167

Query: 136 TTFTPMWRKGPLGPKSLCNACGIRYRKE 156
              TPMWR+GPLGPKSLCNACGI++RKE
Sbjct: 168 ALNTPMWRRGPLGPKSLCNACGIKFRKE 193

[Close]
BLAST of Tan0013033 vs. ExPASy Swiss-Prot
Match: Q6QPM2 (GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2)

HSP 1 Score: 65.9 bits (159), Expect = 5.3e-10
Identity = 33/55 (60.00%), Postives = 38/55 (69.09%), Query Frame = 0 

Query: 115 NEAEKRCTNYNCNTTFTPMWRKGPLGPKSLCNACGIRYRKETLNREAMAAENSHS 170
           N   +RC   NC+TT TP+WR GP GPKSLCNACGIR++KE   R A  A NS S
Sbjct: 71  NLLARRCA--NCDTTSTPLWRNGPRGPKSLCNACGIRFKKE--ERRASTARNSTS 121

[Close]
BLAST of Tan0013033 vs. ExPASy Swiss-Prot
Match: B8AX51 (GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.5e-09
Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 0 

Query: 118 EKRCTNYNCNTTFTPMWRKGPLGPKSLCNACGIRYRKE 156
           ++RC   NC T  TP+WR GP GPKSLCNACGIRY+KE
Sbjct: 151 DRRCA--NCGTASTPLWRNGPRGPKSLCNACGIRYKKE 186

[Close]
BLAST of Tan0013033 vs. ExPASy Swiss-Prot
Match: Q6L5E5 (GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 4.5e-09
Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 0 

Query: 118 EKRCTNYNCNTTFTPMWRKGPLGPKSLCNACGIRYRKE 156
           ++RC   NC T  TP+WR GP GPKSLCNACGIRY+KE
Sbjct: 151 DRRCA--NCGTASTPLWRNGPRGPKSLCNACGIRYKKE 186

[Close]
BLAST of Tan0013033 vs. ExPASy Swiss-Prot
Match: Q8LC79 (GATA transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=GATA18 PE=1 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 4.5e-09
Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 119 KRCTNYNCNTTFTPMWRKGPLGPKSLCNACGIRYRKE 156
           +RC   NC+TT TP+WR GP GPKSLCNACGIR++KE
Sbjct: 152 RRCA--NCDTTSTPLWRNGPRGPKSLCNACGIRFKKE 186

[Close]
BLAST of Tan0013033 vs. NCBI nr
Match: XP_038902274.1 (putative GATA transcription factor 22 [Benincasa hispida])

HSP 1 Score: 231.5 bits (589), Expect = 5.5e-57
Identity = 128/178 (71.91%), Postives = 140/178 (78.65%), Query Frame = 0 

Query: 1   MVNNHGMASCGGRNGEMMMSEGNYNPHQIVWSKELKTYVLNSNNYEQL-----------M 60
           MV+NHG AS GGRNGE MMSE NYNPHQIVWSKELKTYVL SN++ QL            
Sbjct: 73  MVDNHGSASSGGRNGE-MMSEANYNPHQIVWSKELKTYVLKSNDFGQLHPSSYSNTHQAK 132

Query: 61  PIGSTANNNMIAANLHIPLQKNNNNNNDLYTLLNPASRITDDQQEADASSSARRKGTRRR 120
           PI +T NN   + NL +P       NNDLYTLLNPASRITDD  EA+ASS  RR+G+RRR
Sbjct: 133 PIATTPNN---SPNLPLP-----KYNNDLYTLLNPASRITDD-HEAEASSGGRRRGSRRR 192

Query: 121 RVSSCNEAEKRCTNYNCNTTFTPMWRKGPLGPKSLCNACGIRYRKETLNREAMAAENS 168
           RVS+ N+AE+RCTNYNCNT FTPMWRKGPLGPKSLCNACGIRYRKETLNREAMAAENS
Sbjct: 193 RVSANNDAERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETLNREAMAAENS 240

[Close]
BLAST of Tan0013033 vs. NCBI nr
Match: XP_022985849.1 (GATA zinc finger domain-containing protein 8-like [Cucurbita maxima])

HSP 1 Score: 228.0 bits (580), Expect = 6.1e-56
Identity = 125/177 (70.62%), Postives = 139/177 (78.53%), Query Frame = 0 

Query: 3   NNHGMASCGGRNGEMMMSEGNYNPHQIVWSKELKTYVLNSNNYEQLMP-----------I 62
           NNHG+AS GGRNGE MMSE NYNPHQIVWSKELKTYVL SNN+ QL P           +
Sbjct: 97  NNHGLASSGGRNGE-MMSEANYNPHQIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTV 156

Query: 63  GSTANNNMIAANLHIPLQKNNNNNNDLYTLLNPASRITDDQQEADASSSARRKGTRRRRV 122
           GSTAN+    ANL  PLQ   N NND YTLLNPA R  DD  EA+ASS +RR+G +RRRV
Sbjct: 157 GSTANS---TANL--PLQ---NYNNDQYTLLNPACRKADD-HEAEASSGSRRRGLQRRRV 216

Query: 123 SSCNEAEKRCTNYNCNTTFTPMWRKGPLGPKSLCNACGIRYRKETLNREAMAAENSH 169
           S+CNE E+RCTNYNCNT FTPMWRKGPLGPKSLCNACGIRYRKE +N+EA+AAEN+H
Sbjct: 217 SACNEVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEIMNKEAVAAENNH 263

[Close]
BLAST of Tan0013033 vs. NCBI nr
Match: XP_023513295.1 (putative GATA transcription factor 22 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224.2 bits (570), Expect = 8.9e-55
Identity = 122/177 (68.93%), Postives = 136/177 (76.84%), Query Frame = 0 

Query: 3   NNHGMASCGGRNGEMMMSEGNYNPHQIVWSKELKTYVLNSNNYEQLMP-----------I 62
           NNHG+AS GGR+GE MMSE NYNPHQIVWSKELKTYVL SNN+ QL P           I
Sbjct: 97  NNHGLASSGGRSGE-MMSEANYNPHQIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTI 156

Query: 63  GSTANNNMIAANLHIPLQKNNNNNNDLYTLLNPASRITDDQQEADASSSARRKGTRRRRV 122
           GSTAN+    ANL  PLQ   N NND YTLLNPA R TDD +   +S   RR+G +RRRV
Sbjct: 157 GSTANS---MANL--PLQ---NYNNDQYTLLNPACRKTDDHEAEASSGGGRRRGLQRRRV 216

Query: 123 SSCNEAEKRCTNYNCNTTFTPMWRKGPLGPKSLCNACGIRYRKETLNREAMAAENSH 169
           S+CNE E+RCTNYNCNT FTPMWRKGPLGPKSLCNACGIRYRKE +N+EA+AAEN+H
Sbjct: 217 SACNEVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEIMNKEAVAAENNH 264

[Close]
BLAST of Tan0013033 vs. NCBI nr
Match: XP_023522473.1 (GATA transcription factor 21-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224.2 bits (570), Expect = 8.9e-55
Identity = 122/177 (68.93%), Postives = 136/177 (76.84%), Query Frame = 0 

Query: 3   NNHGMASCGGRNGEMMMSEGNYNPHQIVWSKELKTYVLNSNNYEQLMP-----------I 62
           NNHG+AS GGR+GE MMSE NYNPHQIVWSKELKTYVL SNN+ QL P           I
Sbjct: 4   NNHGLASSGGRSGE-MMSEANYNPHQIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTI 63

Query: 63  GSTANNNMIAANLHIPLQKNNNNNNDLYTLLNPASRITDDQQEADASSSARRKGTRRRRV 122
           GSTAN+    ANL  PLQ   N NND YTLLNPA R TDD +   +S   RR+G +RRRV
Sbjct: 64  GSTANS---MANL--PLQ---NYNNDQYTLLNPACRKTDDHEAEASSGGGRRRGLQRRRV 123

Query: 123 SSCNEAEKRCTNYNCNTTFTPMWRKGPLGPKSLCNACGIRYRKETLNREAMAAENSH 169
           S+CNE E+RCTNYNCNT FTPMWRKGPLGPKSLCNACGIRYRKE +N+EA+AAEN+H
Sbjct: 124 SACNEVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEIMNKEAVAAENNH 171

[Close]
BLAST of Tan0013033 vs. NCBI nr
Match: KAG7010246.1 (GATA transcription factor 29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 223.8 bits (569), Expect = 1.2e-54
Identity = 120/177 (67.80%), Postives = 134/177 (75.71%), Query Frame = 0 

Query: 3   NNHGMASCGGRNGEMMMSEGNYNPHQIVWSKELKTYVLNSNNYEQLMP-----------I 62
           NNHG+AS G RNGE MMSE NYNPHQIVWSKELKTYVL SNN+ QL P           I
Sbjct: 95  NNHGLASSGSRNGE-MMSEANYNPHQIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTI 154

Query: 63  GSTANNNMIAANLHIPLQKNNNNNNDLYTLLNPASRITDDQQEADASSSARRKGTRRRRV 122
           GSTAN+       ++PLQ   N NND YTLLNPA R TDD +   +S   RR+G +RRRV
Sbjct: 155 GSTANSMP-----NLPLQ---NYNNDQYTLLNPACRKTDDHEAEASSGGGRRRGLQRRRV 214

Query: 123 SSCNEAEKRCTNYNCNTTFTPMWRKGPLGPKSLCNACGIRYRKETLNREAMAAENSH 169
           S+CNE E+RCTNYNCNT FTPMWRKGPLGPKSLCNACGIRYRKE +N+EAMAAEN+H
Sbjct: 215 SACNEVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEIMNKEAMAAENNH 262

[Close]
BLAST of Tan0013033 vs. ExPASy TrEMBL
Match: A0A6J1JEF0 (GATA zinc finger domain-containing protein 8-like OS=Cucurbita maxima OX=3661 GN=LOC111483776 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 3.0e-56
Identity = 125/177 (70.62%), Postives = 139/177 (78.53%), Query Frame = 0 

Query: 3   NNHGMASCGGRNGEMMMSEGNYNPHQIVWSKELKTYVLNSNNYEQLMP-----------I 62
           NNHG+AS GGRNGE MMSE NYNPHQIVWSKELKTYVL SNN+ QL P           +
Sbjct: 97  NNHGLASSGGRNGE-MMSEANYNPHQIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTV 156

Query: 63  GSTANNNMIAANLHIPLQKNNNNNNDLYTLLNPASRITDDQQEADASSSARRKGTRRRRV 122
           GSTAN+    ANL  PLQ   N NND YTLLNPA R  DD  EA+ASS +RR+G +RRRV
Sbjct: 157 GSTANS---TANL--PLQ---NYNNDQYTLLNPACRKADD-HEAEASSGSRRRGLQRRRV 216

Query: 123 SSCNEAEKRCTNYNCNTTFTPMWRKGPLGPKSLCNACGIRYRKETLNREAMAAENSH 169
           S+CNE E+RCTNYNCNT FTPMWRKGPLGPKSLCNACGIRYRKE +N+EA+AAEN+H
Sbjct: 217 SACNEVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEIMNKEAVAAENNH 263

[Close]
BLAST of Tan0013033 vs. ExPASy TrEMBL
Match: A0A6J1FTP0 (GATA zinc finger domain-containing protein 8-like OS=Cucurbita moschata OX=3662 GN=LOC111448354 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 5.6e-55
Identity = 120/177 (67.80%), Postives = 134/177 (75.71%), Query Frame = 0 

Query: 3   NNHGMASCGGRNGEMMMSEGNYNPHQIVWSKELKTYVLNSNNYEQLMP-----------I 62
           NNHG+AS GGR+GE MMSE NYNPHQIVWSKELKTYVL SNN+ QL P           I
Sbjct: 97  NNHGLASSGGRSGE-MMSEANYNPHQIVWSKELKTYVLKSNNFGQLHPSLYCNTYPAKTI 156

Query: 63  GSTANNNMIAANLHIPLQKNNNNNNDLYTLLNPASRITDDQQEADASSSARRKGTRRRRV 122
           GSTAN        ++PLQ   N NND YTLLNPA R TDD +   +S   RR+G +RRRV
Sbjct: 157 GSTANGMP-----NLPLQ---NYNNDQYTLLNPACRKTDDHEAEASSGGGRRRGLQRRRV 216

Query: 123 SSCNEAEKRCTNYNCNTTFTPMWRKGPLGPKSLCNACGIRYRKETLNREAMAAENSH 169
           S+CNE E+RCTNYNCNT FTPMWRKGPLGPKSLCNACGIRYRKE +N+EAMAAEN+H
Sbjct: 217 SACNEVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKEIMNKEAMAAENNH 264

[Close]
BLAST of Tan0013033 vs. ExPASy TrEMBL
Match: A0A5A7TDI3 (GATA transcription factor 29-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold859G00190 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 6.4e-51
Identity = 117/177 (66.10%), Postives = 132/177 (74.58%), Query Frame = 0 

Query: 3   NNHGMASCGGRNGEMMMSEGNYNPHQIVWSKELKTYVLNSNNYEQLMPIG---------- 62
           NN G+A    RN E MMSE NYNPHQIVWSK+LKTYVL SNNY QL P            
Sbjct: 71  NNQGLA----RNNE-MMSEPNYNPHQIVWSKDLKTYVLKSNNYGQLHPSSYSTTTHQAKP 130

Query: 63  -STANNNMIAANLHIPLQKNNNNNNDLYTLLNPASRITDDQQEADASSSARRKGTRRRRV 122
            +T+  N    NL +P      +NNDLYTLLNPASRI+DD  EA+ASS  RRKG+RRRR 
Sbjct: 131 IATSTPNNSTPNLPLP---KKGHNNDLYTLLNPASRISDD-HEAEASSGGRRKGSRRRRA 190

Query: 123 SSCNEAEKRCTNYNCNTTFTPMWRKGPLGPKSLCNACGIRYRKETLNREAMAAENSH 169
           S+ N+ E+RCTNYNCNT FTPMWRKGPLGPKSLCNACGIRYRKET+N+EAMAAENS+
Sbjct: 191 SATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAENSN 238

[Close]
BLAST of Tan0013033 vs. ExPASy TrEMBL
Match: A0A0A0L0J0 (GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G286370 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 5.1e-48
Identity = 116/182 (63.74%), Postives = 132/182 (72.53%), Query Frame = 0 

Query: 1   MVNNHGMASCGGRNGEMMMSEGNY-NPHQIVWSKELKTYVLNSN-------------NYE 60
           M NN G+     RN E MMSE NY NPHQIVWSK+LKTYVL SN             N  
Sbjct: 5   MANNQGLT----RNNE-MMSEPNYNNPHQIVWSKDLKTYVLKSNNNFGQQLHPSSYPNTH 64

Query: 61  QLMPIGSTANNNMIAANLHIPLQKNNNNNNDLYTLLNPASRITDDQQEADASSSARRKGT 120
           Q  PI ++  NN    NL +P      +NNDLYTLLNPASR+ DD  EA+ASS+ RRKG+
Sbjct: 65  QAKPIPTSTPNN--TPNLPLP---KRGHNNDLYTLLNPASRVADD-HEAEASSAGRRKGS 124

Query: 121 RRRRVSSCNEAEKRCTNYNCNTTFTPMWRKGPLGPKSLCNACGIRYRKETLNREAMAAEN 169
           RRRRVS+ N+ E+RCTNYNCNT FTPMWRKGPLGPKSLCNACGIRYRKET+N+EAMAAEN
Sbjct: 125 RRRRVSATNDVERRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKETMNKEAMAAEN 175

[Close]
BLAST of Tan0013033 vs. ExPASy TrEMBL
Match: A0A6J1DIM0 (GATA transcription factor 29 OS=Momordica charantia OX=3673 GN=LOC111021259 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.6e-46
Identity = 111/176 (63.07%), Postives = 129/176 (73.30%), Query Frame = 0 

Query: 3   NNHGMASCGGRNGEMMMSEGNYNPHQIVWSKELKTYVLNSNNYEQL---------MPIGS 62
           NN G+ SCGG      MSE NYNP+QI+WSKELKTYVL SNN   L         + IG+
Sbjct: 61  NNVGLESCGG------MSEANYNPNQILWSKELKTYVLKSNNQTSLGSHDQVKGNIGIGN 120

Query: 63  TANNNMIAANLHIPLQKNNNNNNDLYTLLNPASRITDDQQEADASSSARRKGTRRRRVSS 122
            +  N +A   ++PLQ    N+NDLYTLLNPASR TDD ++ + SS +RRK +R RRVS 
Sbjct: 121 GSTTNNLA---NVPLQ---TNSNDLYTLLNPASRSTDDHED-ETSSGSRRKASRLRRVSH 180

Query: 123 CNEAEKRCTNYNCNTTFTPMWRKGPLGPKSLCNACGIRYRKETLNREAMAAENSHS 170
            +E EKRCTNYNCNT FTPMWRKGPLGPKSLCNACGIRYRKE +NREAM AENSH+
Sbjct: 181 -DEPEKRCTNYNCNTNFTPMWRKGPLGPKSLCNACGIRYRKELMNREAMTAENSHN 222

[Close]
BLAST of Tan0013033 vs. TAIR 10
Match: AT3G20750.1 (GATA transcription factor 29 )

HSP 1 Score: 71.2 bits (173), Expect = 8.9e-13
Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 0 

Query: 76  NDLYTLLN-PASRITDDQQEADASSSARRKGTRRRRVSSCN-------EAEKRCTNYNCN 135
           +D Y L++ PA R    +  +   +++ ++    +R+  C        E  K+CTN NCN
Sbjct: 108 SDEYVLIDVPARRAR--RNNSTVMTNSWKENATPKRIRGCGGFCGGRIEGMKKCTNMNCN 167

Query: 136 TTFTPMWRKGPLGPKSLCNACGIRYRKE 156
              TPMWR+GPLGPKSLCNACGI++RKE
Sbjct: 168 ALNTPMWRRGPLGPKSLCNACGIKFRKE 193

[Close]
BLAST of Tan0013033 vs. TAIR 10
Match: AT4G36620.1 (GATA transcription factor 19 )

HSP 1 Score: 65.9 bits (159), Expect = 3.8e-11
Identity = 33/55 (60.00%), Postives = 38/55 (69.09%), Query Frame = 0 

Query: 115 NEAEKRCTNYNCNTTFTPMWRKGPLGPKSLCNACGIRYRKETLNREAMAAENSHS 170
           N   +RC   NC+TT TP+WR GP GPKSLCNACGIR++KE   R A  A NS S
Sbjct: 71  NLLARRCA--NCDTTSTPLWRNGPRGPKSLCNACGIRFKKE--ERRASTARNSTS 121

[Close]
BLAST of Tan0013033 vs. TAIR 10
Match: AT3G50870.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 62.8 bits (151), Expect = 3.2e-10
Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = 0 

Query: 119 KRCTNYNCNTTFTPMWRKGPLGPKSLCNACGIRYRKE 156
           +RC   NC+TT TP+WR GP GPKSLCNACGIR++KE
Sbjct: 152 RRCA--NCDTTSTPLWRNGPRGPKSLCNACGIRFKKE 186

[Close]
BLAST of Tan0013033 vs. TAIR 10
Match: AT5G56860.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 62.0 bits (149), Expect = 5.4e-10
Identity = 51/121 (42.15%), Postives = 66/121 (54.55%), Query Frame = 0 

Query: 44  NYEQLMPIGSTANNNMIAANLHIPLQKNNNNNNDLYTLLNPASRITDDQQEADASSSARR 103
           N +QL  I  T NNN   ++ H PL    N + D +  LN  + +T   ++  A+++  R
Sbjct: 160 NNKQL--IDQTNNNNHKESD-HYPLNHKTNFDEDHHEDLNFKNVLT---RKTTAATTENR 219

Query: 104 KGTRRRRVSSCNEAEKRCTNYNCNTTFTPMWRKGPLGPKSLCNACGIRYRKETLNREAMA 163
             T      S N    R  + +CNTT TP+WR GP GPKSLCNACGIR RK    R AMA
Sbjct: 220 YNTINENGYSNNNGVIRVCS-DCNTTKTPLWRSGPRGPKSLCNACGIRQRK--ARRAAMA 271

Query: 164 A 165
           A
Sbjct: 280 A 271

[Close]
BLAST of Tan0013033 vs. TAIR 10
Match: AT5G49300.1 (GATA transcription factor 16 )

HSP 1 Score: 59.3 bits (142), Expect = 3.5e-09
Identity = 26/44 (59.09%), Postives = 34/44 (77.27%), Query Frame = 0 

Query: 112 SSCNEAEKRCTNYNCNTTFTPMWRKGPLGPKSLCNACGIRYRKE 156
           +S N+ +K C   +C T+ TP+WR GP+GPKSLCNACGIR RK+
Sbjct: 29  TSVNDKKKTCA--DCGTSKTPLWRGGPVGPKSLCNACGIRNRKK 70

The following BLAST results are available for this feature:
BLAST of Tan0013033 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LT451.3e-1143.18GATA transcription factor 29 OS=Arabidopsis thaliana OX=3702 GN=GATA29 PE=2 SV=1[more]
Q6QPM25.3e-1060.00GATA transcription factor 19 OS=Arabidopsis thaliana OX=3702 GN=GATA19 PE=1 SV=2[more]
B8AX514.5e-0968.42GATA transcription factor 15 OS=Oryza sativa subsp. indica OX=39946 GN=GATA15 PE... [more]
Q6L5E54.5e-0968.42GATA transcription factor 15 OS=Oryza sativa subsp. japonica OX=39947 GN=GATA15 ... [more]
Q8LC794.5e-0970.27GATA transcription factor 18 OS=Arabidopsis thaliana OX=3702 GN=GATA18 PE=1 SV=2[more]
BLAST of Tan0013033 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038902274.15.5e-5771.91putative GATA transcription factor 22 [Benincasa hispida][more]
XP_022985849.16.1e-5670.62GATA zinc finger domain-containing protein 8-like [Cucurbita maxima][more]
XP_023513295.18.9e-5568.93putative GATA transcription factor 22 [Cucurbita pepo subsp. pepo][more]
XP_023522473.18.9e-5568.93GATA transcription factor 21-like [Cucurbita pepo subsp. pepo][more]
KAG7010246.11.2e-5467.80GATA transcription factor 29, partial [Cucurbita argyrosperma subsp. argyrosperm... [more]
BLAST of Tan0013033 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JEF03.0e-5670.62GATA zinc finger domain-containing protein 8-like OS=Cucurbita maxima OX=3661 GN... [more]
A0A6J1FTP05.6e-5567.80GATA zinc finger domain-containing protein 8-like OS=Cucurbita moschata OX=3662 ... [more]
A0A5A7TDI36.4e-5166.10GATA transcription factor 29-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A0A0L0J05.1e-4863.74GATA-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G286370 P... [more]
A0A6J1DIM01.6e-4663.07GATA transcription factor 29 OS=Momordica charantia OX=3673 GN=LOC111021259 PE=4... [more]
BLAST of Tan0013033 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G20750.18.9e-1343.18GATA transcription factor 29 [more]
AT4G36620.13.8e-1160.00GATA transcription factor 19 [more]
AT3G50870.13.2e-1070.27GATA type zinc finger transcription factor family protein [more]
AT5G56860.15.4e-1042.15GATA type zinc finger transcription factor family protein [more]
AT5G49300.13.5e-0959.09GATA transcription factor 16 [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000679Zinc finger, GATA-typeSMARTSM00401GATA_3coord: 115..167
e-value: 4.5E-12
score: 56.1
IPR000679Zinc finger, GATA-typePFAMPF00320GATAcoord: 121..156
e-value: 1.2E-16
score: 59.9
IPR000679Zinc finger, GATA-typePROSITEPS50114GATA_ZN_FINGER_2coord: 125..159
score: 12.017612
IPR000679Zinc finger, GATA-typeCDDcd00202ZnF_GATAcoord: 125..159
e-value: 7.2302E-13
score: 58.153
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 115..173
e-value: 2.2E-14
score: 55.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..113
NoneNo IPR availablePANTHERPTHR45658:SF36GATA TRANSCRIPTION FACTOR 17-RELATEDcoord: 74..167
NoneNo IPR availablePANTHERPTHR45658GATA TRANSCRIPTION FACTORcoord: 74..167
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 118..166

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0013033.1Tan0013033.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0008270 zinc ion binding