Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTTCAGTTCCACATGCTTCTTTGAGAATCCCGAACAATTCAAATGTTTCGTCTATGGAGTGCAAGATTGCTAGCTTAGATCTCAAATTTGGATCAACTTTGGAGAAAAGACCTTCCTTATCACAAGTCCAGATTCAGAATGATTTCTTTAACCTCATTAAGAAGAAAAGTTCAATGAGTTCTTATGTTGTTCTCTCAGATTCATGCATTTCTGTGAAATCTCCTTCAATTGGCCAATCTAATGAACTAACAAGGGAAGAAATCAACATTCCTGCAAGTCCTCATGTTATTGAAAATGGTACTATGGAGACTAGAAATGGAGATAGTTCTGAAGAGGTTCAGGCATCTTGTGACAGTAGTGAAAAAACTAAAAGTCACGTTGCTACAAAATCTCTAGATGAAGAGGAGGTTTCTTTTCTTCATTCTCTTGGATGGGAAGAGAAGTATAGTGAGGACGAAGGCCTTACTGAAGAAGAGATCAATGCTTTCTATCATGAGGTAAACCAATACTACTACTTGTTACGTTTCAATACTTCAATGTTTTTTGCGATGTCTTTTCAACAAAGCACGGTCGGCTTCGGGCATCAACTTTGCGAGATAACCTGCACAAAAAATTTCAATTACCTACCTTATTCACCTTATTTTTGATCGATGATGGTGTGAGGATCAACTTATTGTTGGTTTTTTGGTATGAGATTTTGATTTTCTCATCCTCCCAACCACATTCATTCTTTTCCTTTTCTTGGATCTTGTATGAGAGATGGTTCCTCTTCGCATTGTTCTTCTCTCTGAAGTCTTGTTGGTCAAGTTTTTCGAAGATTTTCAACAGGTACTTGTCCATGTTGTTAGATTGACTCAAGCACAAGGTTTTCCAAGCAAGCGTTGTCGTCCCCACAGATGGCGCCAACTGTTGTTGCTAAATTTTGGACAGGAGAATACACCTGACCTCCACGTGACAACGAAGGGTAAATTTTTATTTTTGGGGGAAGAACGTGACCTGCAAGACAAGGAAAAACCTGGGCACTGGTGTGGCAAATGCTTAAGTCAGAAAAAGAAAAAATGTGTAACAAACTATAATTTAGAGAATGAGAGTTAAGTTGAGTTTCCCTGTCTTGGAGTTAGAATGATCTATTTATAAGATCTTTGACTTTCCTATTCTTTTTCAGATAAAGATTTAAATAGATTTCTCTTTCTATCTAGGAATAAGATTTAAAAATGTTAATCTTACCTGATTTCTCTTGTAATTCAAATTTATCTTCTTGGTTCAATTTCACCCACAACATAGCAGGTTTTGGTTAACAAGATTAGTCATCCCTCGGGTAGGGCTCTGTTAGAGAAACCATCTCAAACCTTGATCTGA
mRNA sequence
ATGCCTTCAGTTCCACATGCTTCTTTGAGAATCCCGAACAATTCAAATGTTTCGTCTATGGAGTGCAAGATTGCTAGCTTAGATCTCAAATTTGGATCAACTTTGGAGAAAAGACCTTCCTTATCACAAGTCCAGATTCAGAATGATTTCTTTAACCTCATTAAGAAGAAAAGTTCAATGAGTTCTTATGTTGTTCTCTCAGATTCATGCATTTCTGTGAAATCTCCTTCAATTGGCCAATCTAATGAACTAACAAGGGAAGAAATCAACATTCCTGCAAGTCCTCATGTTATTGAAAATGGTACTATGGAGACTAGAAATGGAGATAGTTCTGAAGAGGTTCAGGCATCTTGTGACAGTAGTGAAAAAACTAAAAGTCACGTTGCTACAAAATCTCTAGATGAAGAGGAGGTTTCTTTTCTTCATTCTCTTGGATGGGAAGAGAAGTATAGTGAGGACGAAGGCCTTACTGAAGAAGAGATCAATGCTTTCTATCATGAGGTTTTGGTTAACAAGATTAGTCATCCCTCGGGTAGGGCTCTGTTAGAGAAACCATCTCAAACCTTGATCTGA
Coding sequence (CDS)
ATGCCTTCAGTTCCACATGCTTCTTTGAGAATCCCGAACAATTCAAATGTTTCGTCTATGGAGTGCAAGATTGCTAGCTTAGATCTCAAATTTGGATCAACTTTGGAGAAAAGACCTTCCTTATCACAAGTCCAGATTCAGAATGATTTCTTTAACCTCATTAAGAAGAAAAGTTCAATGAGTTCTTATGTTGTTCTCTCAGATTCATGCATTTCTGTGAAATCTCCTTCAATTGGCCAATCTAATGAACTAACAAGGGAAGAAATCAACATTCCTGCAAGTCCTCATGTTATTGAAAATGGTACTATGGAGACTAGAAATGGAGATAGTTCTGAAGAGGTTCAGGCATCTTGTGACAGTAGTGAAAAAACTAAAAGTCACGTTGCTACAAAATCTCTAGATGAAGAGGAGGTTTCTTTTCTTCATTCTCTTGGATGGGAAGAGAAGTATAGTGAGGACGAAGGCCTTACTGAAGAAGAGATCAATGCTTTCTATCATGAGGTTTTGGTTAACAAGATTAGTCATCCCTCGGGTAGGGCTCTGTTAGAGAAACCATCTCAAACCTTGATCTGA
Protein sequence
MPSVPHASLRIPNNSNVSSMECKIASLDLKFGSTLEKRPSLSQVQIQNDFFNLIKKKSSMSSYVVLSDSCISVKSPSIGQSNELTREEINIPASPHVIENGTMETRNGDSSEEVQASCDSSEKTKSHVATKSLDEEEVSFLHSLGWEEKYSEDEGLTEEEINAFYHEVLVNKISHPSGRALLEKPSQTLI
Homology
BLAST of Tan0012885 vs. NCBI nr
Match:
XP_023550773.1 (uncharacterized protein LOC111808812 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 255.0 bits (650), Expect = 5.1e-64
Identity = 136/185 (73.51%), Postives = 156/185 (84.32%), Query Frame = 0
Query: 2 PSVPHASLRIPNNSNVSSMECKIASLDLKFGSTLEKRPSLSQVQIQNDFFNLIKKKSSMS 61
PSVPHA LR PNNSNV+S+E K+ASLDLK G+TLEKRPSLSQVQ +NDFFNLIKKK+SMS
Sbjct: 403 PSVPHAPLRSPNNSNVASVERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMS 462
Query: 62 SYVVLSDSCISVKSPSIGQSNELTREEINIPASPHVIENGTMETRNGDSSEEVQASCDSS 121
S VLSDSC SVKSPSIGQSNELTREEI+IPASPHV+ENG +E NGDSSEEV++SCDS
Sbjct: 463 SSAVLSDSCSSVKSPSIGQSNELTREEIDIPASPHVLENGAVENTNGDSSEEVRSSCDSG 522
Query: 122 EKTKSHVATKSLDEEEVSFLHSLGWEEKYSEDEGLTEEEINAFYHEVLVNKISHPSGRAL 181
EKT++HVA +SLDEEE +FL SLGW+E EDEGLTEEEIN+FY E + K S GR++
Sbjct: 523 EKTETHVAAESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSI 582
Query: 182 LEKPS 187
K S
Sbjct: 583 QPKIS 587
BLAST of Tan0012885 vs. NCBI nr
Match:
XP_022939265.1 (uncharacterized protein LOC111445235 [Cucurbita moschata] >KAG7016524.1 hypothetical protein SDJN02_21633, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 253.1 bits (645), Expect = 2.0e-63
Identity = 135/185 (72.97%), Postives = 155/185 (83.78%), Query Frame = 0
Query: 2 PSVPHASLRIPNNSNVSSMECKIASLDLKFGSTLEKRPSLSQVQIQNDFFNLIKKKSSMS 61
PSVPHA LR PNNSNV+S+E K+ASLDLK G+TLEKRPSLSQVQ +NDFFNLIKKK+SMS
Sbjct: 403 PSVPHAPLRSPNNSNVASVERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMS 462
Query: 62 SYVVLSDSCISVKSPSIGQSNELTREEINIPASPHVIENGTMETRNGDSSEEVQASCDSS 121
S VLSDSC SVKSPSIGQSNELTREEI+ PASPHV+ENG +E NGDSSEEV++SCDS
Sbjct: 463 SSAVLSDSCSSVKSPSIGQSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSG 522
Query: 122 EKTKSHVATKSLDEEEVSFLHSLGWEEKYSEDEGLTEEEINAFYHEVLVNKISHPSGRAL 181
EKT++HVA +SLDEEE +FL SLGW+E EDEGLTEEEIN+FY E + K S GR++
Sbjct: 523 EKTETHVAAESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSI 582
Query: 182 LEKPS 187
K S
Sbjct: 583 QPKIS 587
BLAST of Tan0012885 vs. NCBI nr
Match:
XP_022141429.1 (uncharacterized protein LOC111011833 isoform X2 [Momordica charantia])
HSP 1 Score: 252.7 bits (644), Expect = 2.6e-63
Identity = 133/176 (75.57%), Postives = 148/176 (84.09%), Query Frame = 0
Query: 2 PSVPHASLRIPNNSNVSSMECKIASLDLKFGSTLEKRPSLSQVQIQNDFFNLIKKKSSMS 61
PSVPHA LR PNNSNVSS+E KIASLDLK GSTLEKRPSLSQVQ +NDFFNLIKKK+ S
Sbjct: 422 PSVPHAPLRSPNNSNVSSVERKIASLDLKSGSTLEKRPSLSQVQSRNDFFNLIKKKTPKS 481
Query: 62 SYVVLSDSCISVKSPSIGQSNELTREEINIPASPHVIENGTMETRNGDSSEEVQASCDSS 121
S +LSDSC +VKSP+IGQSNELTREEINIPASP V+ENG +ETRNGDSSEEVQASCDS
Sbjct: 482 SSAILSDSCPAVKSPTIGQSNELTREEINIPASPRVVENGAVETRNGDSSEEVQASCDSG 541
Query: 122 EKTKSHVATKSLDEEEVSFLHSLGWEEKYSEDEGLTEEEINAFYHEVLVNKISHPS 178
EK SHV +SLDEEE +FL SLGW+E Y EDEGLTEEEIN+FY E+ + P+
Sbjct: 542 EKLASHVGAESLDEEEAAFLRSLGWDESYGEDEGLTEEEINSFYEELQYMNLKPPT 597
BLAST of Tan0012885 vs. NCBI nr
Match:
XP_022141428.1 (flocculation protein FLO11 isoform X1 [Momordica charantia])
HSP 1 Score: 252.7 bits (644), Expect = 2.6e-63
Identity = 133/176 (75.57%), Postives = 148/176 (84.09%), Query Frame = 0
Query: 2 PSVPHASLRIPNNSNVSSMECKIASLDLKFGSTLEKRPSLSQVQIQNDFFNLIKKKSSMS 61
PSVPHA LR PNNSNVSS+E KIASLDLK GSTLEKRPSLSQVQ +NDFFNLIKKK+ S
Sbjct: 425 PSVPHAPLRSPNNSNVSSVERKIASLDLKSGSTLEKRPSLSQVQSRNDFFNLIKKKTPKS 484
Query: 62 SYVVLSDSCISVKSPSIGQSNELTREEINIPASPHVIENGTMETRNGDSSEEVQASCDSS 121
S +LSDSC +VKSP+IGQSNELTREEINIPASP V+ENG +ETRNGDSSEEVQASCDS
Sbjct: 485 SSAILSDSCPAVKSPTIGQSNELTREEINIPASPRVVENGAVETRNGDSSEEVQASCDSG 544
Query: 122 EKTKSHVATKSLDEEEVSFLHSLGWEEKYSEDEGLTEEEINAFYHEVLVNKISHPS 178
EK SHV +SLDEEE +FL SLGW+E Y EDEGLTEEEIN+FY E+ + P+
Sbjct: 545 EKLASHVGAESLDEEEAAFLRSLGWDESYGEDEGLTEEEINSFYEELQYMNLKPPT 600
BLAST of Tan0012885 vs. NCBI nr
Match:
XP_022141430.1 (flocculation protein FLO11 isoform X3 [Momordica charantia] >XP_022141431.1 flocculation protein FLO11 isoform X3 [Momordica charantia])
HSP 1 Score: 252.7 bits (644), Expect = 2.6e-63
Identity = 133/176 (75.57%), Postives = 148/176 (84.09%), Query Frame = 0
Query: 2 PSVPHASLRIPNNSNVSSMECKIASLDLKFGSTLEKRPSLSQVQIQNDFFNLIKKKSSMS 61
PSVPHA LR PNNSNVSS+E KIASLDLK GSTLEKRPSLSQVQ +NDFFNLIKKK+ S
Sbjct: 411 PSVPHAPLRSPNNSNVSSVERKIASLDLKSGSTLEKRPSLSQVQSRNDFFNLIKKKTPKS 470
Query: 62 SYVVLSDSCISVKSPSIGQSNELTREEINIPASPHVIENGTMETRNGDSSEEVQASCDSS 121
S +LSDSC +VKSP+IGQSNELTREEINIPASP V+ENG +ETRNGDSSEEVQASCDS
Sbjct: 471 SSAILSDSCPAVKSPTIGQSNELTREEINIPASPRVVENGAVETRNGDSSEEVQASCDSG 530
Query: 122 EKTKSHVATKSLDEEEVSFLHSLGWEEKYSEDEGLTEEEINAFYHEVLVNKISHPS 178
EK SHV +SLDEEE +FL SLGW+E Y EDEGLTEEEIN+FY E+ + P+
Sbjct: 531 EKLASHVGAESLDEEEAAFLRSLGWDESYGEDEGLTEEEINSFYEELQYMNLKPPT 586
BLAST of Tan0012885 vs. ExPASy TrEMBL
Match:
A0A6J1FM76 (uncharacterized protein LOC111445235 OS=Cucurbita moschata OX=3662 GN=LOC111445235 PE=4 SV=1)
HSP 1 Score: 253.1 bits (645), Expect = 9.5e-64
Identity = 135/185 (72.97%), Postives = 155/185 (83.78%), Query Frame = 0
Query: 2 PSVPHASLRIPNNSNVSSMECKIASLDLKFGSTLEKRPSLSQVQIQNDFFNLIKKKSSMS 61
PSVPHA LR PNNSNV+S+E K+ASLDLK G+TLEKRPSLSQVQ +NDFFNLIKKK+SMS
Sbjct: 403 PSVPHAPLRSPNNSNVASVERKMASLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMS 462
Query: 62 SYVVLSDSCISVKSPSIGQSNELTREEINIPASPHVIENGTMETRNGDSSEEVQASCDSS 121
S VLSDSC SVKSPSIGQSNELTREEI+ PASPHV+ENG +E NGDSSEEV++SCDS
Sbjct: 463 SSAVLSDSCSSVKSPSIGQSNELTREEIDTPASPHVLENGVVENTNGDSSEEVRSSCDSG 522
Query: 122 EKTKSHVATKSLDEEEVSFLHSLGWEEKYSEDEGLTEEEINAFYHEVLVNKISHPSGRAL 181
EKT++HVA +SLDEEE +FL SLGW+E EDEGLTEEEIN+FY E + K S GR++
Sbjct: 523 EKTETHVAAESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSI 582
Query: 182 LEKPS 187
K S
Sbjct: 583 QPKIS 587
BLAST of Tan0012885 vs. ExPASy TrEMBL
Match:
A0A6J1CI28 (flocculation protein FLO11 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111011833 PE=4 SV=1)
HSP 1 Score: 252.7 bits (644), Expect = 1.2e-63
Identity = 133/176 (75.57%), Postives = 148/176 (84.09%), Query Frame = 0
Query: 2 PSVPHASLRIPNNSNVSSMECKIASLDLKFGSTLEKRPSLSQVQIQNDFFNLIKKKSSMS 61
PSVPHA LR PNNSNVSS+E KIASLDLK GSTLEKRPSLSQVQ +NDFFNLIKKK+ S
Sbjct: 411 PSVPHAPLRSPNNSNVSSVERKIASLDLKSGSTLEKRPSLSQVQSRNDFFNLIKKKTPKS 470
Query: 62 SYVVLSDSCISVKSPSIGQSNELTREEINIPASPHVIENGTMETRNGDSSEEVQASCDSS 121
S +LSDSC +VKSP+IGQSNELTREEINIPASP V+ENG +ETRNGDSSEEVQASCDS
Sbjct: 471 SSAILSDSCPAVKSPTIGQSNELTREEINIPASPRVVENGAVETRNGDSSEEVQASCDSG 530
Query: 122 EKTKSHVATKSLDEEEVSFLHSLGWEEKYSEDEGLTEEEINAFYHEVLVNKISHPS 178
EK SHV +SLDEEE +FL SLGW+E Y EDEGLTEEEIN+FY E+ + P+
Sbjct: 531 EKLASHVGAESLDEEEAAFLRSLGWDESYGEDEGLTEEEINSFYEELQYMNLKPPT 586
BLAST of Tan0012885 vs. ExPASy TrEMBL
Match:
A0A6J1CIL7 (uncharacterized protein LOC111011833 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011833 PE=4 SV=1)
HSP 1 Score: 252.7 bits (644), Expect = 1.2e-63
Identity = 133/176 (75.57%), Postives = 148/176 (84.09%), Query Frame = 0
Query: 2 PSVPHASLRIPNNSNVSSMECKIASLDLKFGSTLEKRPSLSQVQIQNDFFNLIKKKSSMS 61
PSVPHA LR PNNSNVSS+E KIASLDLK GSTLEKRPSLSQVQ +NDFFNLIKKK+ S
Sbjct: 422 PSVPHAPLRSPNNSNVSSVERKIASLDLKSGSTLEKRPSLSQVQSRNDFFNLIKKKTPKS 481
Query: 62 SYVVLSDSCISVKSPSIGQSNELTREEINIPASPHVIENGTMETRNGDSSEEVQASCDSS 121
S +LSDSC +VKSP+IGQSNELTREEINIPASP V+ENG +ETRNGDSSEEVQASCDS
Sbjct: 482 SSAILSDSCPAVKSPTIGQSNELTREEINIPASPRVVENGAVETRNGDSSEEVQASCDSG 541
Query: 122 EKTKSHVATKSLDEEEVSFLHSLGWEEKYSEDEGLTEEEINAFYHEVLVNKISHPS 178
EK SHV +SLDEEE +FL SLGW+E Y EDEGLTEEEIN+FY E+ + P+
Sbjct: 542 EKLASHVGAESLDEEEAAFLRSLGWDESYGEDEGLTEEEINSFYEELQYMNLKPPT 597
BLAST of Tan0012885 vs. ExPASy TrEMBL
Match:
A0A6J1CKG8 (flocculation protein FLO11 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011833 PE=4 SV=1)
HSP 1 Score: 252.7 bits (644), Expect = 1.2e-63
Identity = 133/176 (75.57%), Postives = 148/176 (84.09%), Query Frame = 0
Query: 2 PSVPHASLRIPNNSNVSSMECKIASLDLKFGSTLEKRPSLSQVQIQNDFFNLIKKKSSMS 61
PSVPHA LR PNNSNVSS+E KIASLDLK GSTLEKRPSLSQVQ +NDFFNLIKKK+ S
Sbjct: 425 PSVPHAPLRSPNNSNVSSVERKIASLDLKSGSTLEKRPSLSQVQSRNDFFNLIKKKTPKS 484
Query: 62 SYVVLSDSCISVKSPSIGQSNELTREEINIPASPHVIENGTMETRNGDSSEEVQASCDSS 121
S +LSDSC +VKSP+IGQSNELTREEINIPASP V+ENG +ETRNGDSSEEVQASCDS
Sbjct: 485 SSAILSDSCPAVKSPTIGQSNELTREEINIPASPRVVENGAVETRNGDSSEEVQASCDSG 544
Query: 122 EKTKSHVATKSLDEEEVSFLHSLGWEEKYSEDEGLTEEEINAFYHEVLVNKISHPS 178
EK SHV +SLDEEE +FL SLGW+E Y EDEGLTEEEIN+FY E+ + P+
Sbjct: 545 EKLASHVGAESLDEEEAAFLRSLGWDESYGEDEGLTEEEINSFYEELQYMNLKPPT 600
BLAST of Tan0012885 vs. ExPASy TrEMBL
Match:
A0A6J1JV88 (uncharacterized protein LOC111489184 OS=Cucurbita maxima OX=3661 GN=LOC111489184 PE=4 SV=1)
HSP 1 Score: 248.8 bits (634), Expect = 1.8e-62
Identity = 134/185 (72.43%), Postives = 154/185 (83.24%), Query Frame = 0
Query: 2 PSVPHASLRIPNNSNVSSMECKIASLDLKFGSTLEKRPSLSQVQIQNDFFNLIKKKSSMS 61
PSVPHA LR PNNSNV+S+E K+A LDLK G+TLEKRPSLSQVQ +NDFFNLIKKK+SMS
Sbjct: 403 PSVPHAPLRSPNNSNVASVERKMAGLDLKSGTTLEKRPSLSQVQSRNDFFNLIKKKTSMS 462
Query: 62 SYVVLSDSCISVKSPSIGQSNELTREEINIPASPHVIENGTMETRNGDSSEEVQASCDSS 121
S VLSDS SVKSPSIGQSNELTREEI+IPASPHV+ENG +E NGDSSEEV++SCDS
Sbjct: 463 SSAVLSDSRSSVKSPSIGQSNELTREEIDIPASPHVLENGAVENTNGDSSEEVRSSCDSG 522
Query: 122 EKTKSHVATKSLDEEEVSFLHSLGWEEKYSEDEGLTEEEINAFYHEVLVNKISHPSGRAL 181
EKT++HVA +SLDEEE +FL SLGW+E EDEGLTEEEIN+FY E + K S GR++
Sbjct: 523 EKTETHVAAESLDEEEAAFLRSLGWDENCGEDEGLTEEEINSFYREYMSLKPSLKMGRSI 582
Query: 182 LEKPS 187
K S
Sbjct: 583 QPKIS 587
BLAST of Tan0012885 vs. TAIR 10
Match:
AT1G36990.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G08510.1); Has 5029 Blast hits to 1779 proteins in 339 species: Archae - 2; Bacteria - 1372; Metazoa - 990; Fungi - 933; Plants - 111; Viruses - 28; Other Eukaryotes - 1593 (source: NCBI BLink). )
HSP 1 Score: 56.6 bits (135), Expect = 2.5e-08
Identity = 53/157 (33.76%), Postives = 76/157 (48.41%), Query Frame = 0
Query: 12 PNNSNVSSMECKIAS-LDLKFGSTLEKRPSLSQVQIQNDFFNLIKKKSSMSSYVVLSDSC 71
P S S E K AS + G T+EK+PS +Q Q ++ F++ +K+K + S+ + +D
Sbjct: 412 PVRSTNSPKELKGASAFSMISGQTIEKKPSAAQAQSRSAFYSALKQKQTASTSIT-TDPV 471
Query: 72 ISVKSPSIGQSNELTREEINIPASPHVIENGTMETRNGDSSEEVQASCDSSEKTKSHVAT 131
S S S +L + I + P + S EV S + T AT
Sbjct: 472 SSSTSASSSVEVKLNSSKDLIASDP--------SSSQATSGVEVTDSVQVASHTSGFEAT 531
Query: 132 KSLDEEEVSFLHSLGWEEKYSEDEGLTEEEINAFYHE 168
+ DEEE FL SLGW E E E LTEEEI++F +
Sbjct: 532 DTPDEEEAQFLRSLGWVENNGE-EYLTEEEIDSFLEQ 558
BLAST of Tan0012885 vs. TAIR 10
Match:
AT4G08510.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36990.1); Has 888 Blast hits to 321 proteins in 121 species: Archae - 0; Bacteria - 120; Metazoa - 86; Fungi - 24; Plants - 79; Viruses - 0; Other Eukaryotes - 579 (source: NCBI BLink). )
HSP 1 Score: 41.6 bits (96), Expect = 8.3e-04
Identity = 40/140 (28.57%), Postives = 70/140 (50.00%), Query Frame = 0
Query: 25 ASLDLKFGSTLEKRPSLSQVQIQNDFFNLIKKK--SSMSSYVVLSDSCI-SVKSPSIGQS 84
AS+++ G EK+ SL+Q Q ++ F++ +K+K +++S+ + SCI S S
Sbjct: 404 ASVNMLAGKAAEKKLSLAQTQSRHAFYSALKQKTCTNISTDPSKTSSCILSSVEEQANSS 463
Query: 85 NELTREEINIPASPHVIENGTMETRNGDSSEEVQASCDSSEKTKSHVATKSLDEEEVSFL 144
EL + P+SP E + E V+ + +E+ + D +E +FL
Sbjct: 464 KELVASD---PSSPQAAE-------RDEIMESVEKVSNVAERISRFESAVRPDPKEAAFL 523
Query: 145 HSLGWEEKYSEDEGLTEEEI 162
SLGW+E S++ T EE+
Sbjct: 524 KSLGWDENDSDEYTHTMEEM 533
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
XP_023550773.1 | 5.1e-64 | 73.51 | uncharacterized protein LOC111808812 [Cucurbita pepo subsp. pepo] | [more] |
XP_022939265.1 | 2.0e-63 | 72.97 | uncharacterized protein LOC111445235 [Cucurbita moschata] >KAG7016524.1 hypothet... | [more] |
XP_022141429.1 | 2.6e-63 | 75.57 | uncharacterized protein LOC111011833 isoform X2 [Momordica charantia] | [more] |
XP_022141428.1 | 2.6e-63 | 75.57 | flocculation protein FLO11 isoform X1 [Momordica charantia] | [more] |
XP_022141430.1 | 2.6e-63 | 75.57 | flocculation protein FLO11 isoform X3 [Momordica charantia] >XP_022141431.1 floc... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FM76 | 9.5e-64 | 72.97 | uncharacterized protein LOC111445235 OS=Cucurbita moschata OX=3662 GN=LOC1114452... | [more] |
A0A6J1CI28 | 1.2e-63 | 75.57 | flocculation protein FLO11 isoform X3 OS=Momordica charantia OX=3673 GN=LOC11101... | [more] |
A0A6J1CIL7 | 1.2e-63 | 75.57 | uncharacterized protein LOC111011833 isoform X2 OS=Momordica charantia OX=3673 G... | [more] |
A0A6J1CKG8 | 1.2e-63 | 75.57 | flocculation protein FLO11 isoform X1 OS=Momordica charantia OX=3673 GN=LOC11101... | [more] |
A0A6J1JV88 | 1.8e-62 | 72.43 | uncharacterized protein LOC111489184 OS=Cucurbita maxima OX=3661 GN=LOC111489184... | [more] |
Match Name | E-value | Identity | Description | |
AT1G36990.1 | 2.5e-08 | 33.76 | unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXP... | [more] |
AT4G08510.1 | 8.3e-04 | 28.57 | unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein matc... | [more] |