Tan0012880 (gene) Snake gourd v1

Overview


Name	Tan0012880
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	tRNA-uridine aminocarboxypropyltransferase
Location	LG03: 52368364 .. 52370534 (+)
RNA-Seq Expression	Tan0012880
Synteny	Tan0012880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGTGAACCAATACAAGCTTTATTTAATTTTTTTAGATATATTATTTTAAATTTATTATAAATATTAACTATTTTTTCTTATGATTTAAAGAAGTCGTGTTTCAAACAAATTTGAGATCTTCCAACAAAATTTGGAGTTTCTTCATCTATATGATAGTGGAGAAAAAAATTTCGATCAATTACATTATAGATACAACATTCCTATTGCCCCTCCTAATTCTGGTCCTAAACCTAGAAAACGTGCTCGATGACAGAACATTCCTCAGCAGAAGGATATTAAAGAAGAGGAGTAGTTGTCCTAAGTTGTACGAGTTGAGGTTGACCAAAGCATCGACATAGATGCTTTTGAGGTTGGTCTTTCACCTCAATAATGATGATACCCACTCTTGGTTCACTAAATATTCATACACCAGGCGCACATGAAGGTTGATCCTTCGTCATCACATAGTTGCATTTATGGGCATGGAGAGCATAATCAATATTTGTATTCTACTAAACCACAAAAGGAGGAACCTGATGAATCAAAAACACAATATCAAGCCCCAAAGGATGTAATCGAGGGCATCCACCTTGTGGCACACACTAAATTTGATATTGTTTAACTTGTATTGATTACTTTGGGTTTAGGTTTTAAATTTTAATTTAAGTTTTAATTTAGATTGTCTACTTAGTTTTAATTTAGTAATATTCTTTTCAATCATTAGCATTGAACACAAAATTATGATCACAAATTTAAACTATTAAAAAACAAGGTAAATAGTTAAATTTGCAACATTTAAATACTAATTTTTTTAAAAAAAGTTGCTTAGTTTTAGTGAAGGTTGTCGACTTCTTATGAAATGCACATAGGACCTAGATATAGGTCATCTCCTACTACCACGTAAATGTAATAATAAGAACGACAATATTTCTCTAAATAGTTTGAAAGTTCTATATTTTTATAATAAGTTTTCAAACTTGCAATATCAATAAAAAAATGTCCATCTATTTGTAGTTGAAGGTTTTAATGGAGAGTATAGATGGATTGTTTTCTCTTTTTTATTAATAACTGATAGGATAATCCACCTCCAAAATATAGATTATTATAATCCAAGATTAATATTATATAATTTTAAATAATATTATATAATTTTACATACTATAATAACCTAGCTACTATTATAACTCATGCTATTACAATCTACCCAACACTCCTAAATATTTGAAAGGATAAAAATGATAATTATTAATAGATTAAAAATCAAATTTATAATTATCGAAAAGATTAGATATGCATATGCTTTAATATTTTTAAAAATAATTTTTTTAGACCTATATTATACAAGCACCCGAACCTGATGCCATACGTTACTCAAAAAGCAGCTAAACTCGTGAAAGCAACACACCGCATGGAGCCAACAAACAACCACCACGAGTCCGCCGCCGCAGCCACCGGAAATTCGTCTTCCTCGCCGCCACCACGGCGGACAATTTGCCCTAATTGCACCCGTCCCCAACCAGTCTGCCTCTGCAAGTTCCTTCCATCCCCGCCAATCGCAACCAGAACAAAAATCATCATCCTCCAACATCCTCACGAGGCTCAACACAAGCTCTCCACCACTCCGATCCTCACCAAATGCCTCCAAAACGCAACCACCATCGTCAATCGCCGCCTCAAGCCAGGCCTCTCCGATCTCCTCGACCGATCGCCTCCCGCCGTCTTCCTCTTCCCGCCGACACCTCACGACTCCTCGCCGCCGATCAACGTATCGGAACTCGACCTGACGTCCTCGGCGGATTCCGATCTGGTCCTGATAGCGTTCGATGGAACGTGGAAGCACGCGAAGGAGATGGTGCGATCGAGCGAGGAGTTTCTGTCGAGGTTCGCGAGGAGAGTTTGCTTGGATTTCGACGAGAGCGTGGAGGGCGGAAGCATTTTCGATTCGGAGTTGATTCTGAGGAAGGAGCCGCACGGCGGTTGCGTTAGCACGATGGAGGCCGTGGCGAGGTGTTTGAGAGTAATGGAAGCGGATGATGGGGCGGAGATTGAGAGGAGATTGATTGGGGTTTTGAGGGAAATGGTTAGGTTACAGGCTGGGTTCTTGAAGCCCATGAACCCTAGGCCCAAATTGTTGAACATGAAGAAGATGAAAAAGATGAAGATGAATGAGAGGGAGGATGAAATTGAATGA

mRNA sequence

TAGTGAACCAATACAAGCTTTATTTAATTTTTTTAGATATATTATTTTAAATTTATTATAAATATTAACTATTTTTTCTTATGATTTAAAGAAGTCGTGTTTCAAACAAATTTGAGATCTTCCAACAAAATTTGGAGTTTCTTCATCTATATGATAGTGGAGAAAAAAATTTCGATCAATTACATTATAGATACAACATTCCTATTGCCCCTCCTAATTCTGGTCCTAAACCTAGAAAACGTGCTCGATGACAGAACATTCCTCAGCAGAAGGATATTAAAGAAGAGGAGTAGTTGTCCTAAGTTGTACGAGTTGAGGTTGACCAAAGCATCGACATAGATGCTTTTGAGGTTGGTCTTTCACCTCAATAATGATGATACCCACTCTTGGTTCACTAAATATTCATACACCAGGCGCACATGAAGGTTGATCCTTCGTCATCACATAGTTGCATTTATGGGCATGGAGAGCATAATCAATATTTGTATTCTACTAAACCACAAAAGGAGGAACCTGATGAATCAAAAACACAATATCAAGCCCCAAAGGATGTAATCGAGGGCATCCACCTTGTGGCACACACTAAATTTGATATTGTTTAACTTGTATTGATTACTTTGGGTTTAGGTTTTAAATTTTAATTTAAGTTTTAATTTAGATTGTCTACTTAGTTTTAATTTAGTAATATTCTTTTCAATCATTAGCATTGAACACAAAATTATGATCACAAATTTAAACTATTAAAAAACAAGGTAAATAGTTAAATTTGCAACATTTAAATACTAATTTTTTTAAAAAAAGTTGCTTAGTTTTAGTGAAGGTTGTCGACTTCTTATGAAATGCACATAGGACCTAGATATAGGTCATCTCCTACTACCACGTAAATGTAATAATAAGAACGACAATATTTCTCTAAATAGTTTGAAAGTTCTATATTTTTATAATAAGTTTTCAAACTTGCAATATCAATAAAAAAATGTCCATCTATTTGTAGTTGAAGGTTTTAATGGAGAGTATAGATGGATTGTTTTCTCTTTTTTATTAATAACTGATAGGATAATCCACCTCCAAAATATAGATTATTATAATCCAAGATTAATATTATATAATTTTAAATAATATTATATAATTTTACATACTATAATAACCTAGCTACTATTATAACTCATGCTATTACAATCTACCCAACACTCCTAAATATTTGAAAGGATAAAAATGATAATTATTAATAGATTAAAAATCAAATTTATAATTATCGAAAAGATTAGATATGCATATGCTTTAATATTTTTAAAAATAATTTTTTTAGACCTATATTATACAAGCACCCGAACCTGATGCCATACGTTACTCAAAAAGCAGCTAAACTCGTGAAAGCAACACACCGCATGGAGCCAACAAACAACCACCACGAGTCCGCCGCCGCAGCCACCGGAAATTCGTCTTCCTCGCCGCCACCACGGCGGACAATTTGCCCTAATTGCACCCGTCCCCAACCAGTCTGCCTCTGCAAGTTCCTTCCATCCCCGCCAATCGCAACCAGAACAAAAATCATCATCCTCCAACATCCTCACGAGGCTCAACACAAGCTCTCCACCACTCCGATCCTCACCAAATGCCTCCAAAACGCAACCACCATCGTCAATCGCCGCCTCAAGCCAGGCCTCTCCGATCTCCTCGACCGATCGCCTCCCGCCGTCTTCCTCTTCCCGCCGACACCTCACGACTCCTCGCCGCCGATCAACGTATCGGAACTCGACCTGACGTCCTCGGCGGATTCCGATCTGGTCCTGATAGCGTTCGATGGAACGTGGAAGCACGCGAAGGAGATGGTGCGATCGAGCGAGGAGTTTCTGTCGAGGTTCGCGAGGAGAGTTTGCTTGGATTTCGACGAGAGCGTGGAGGGCGGAAGCATTTTCGATTCGGAGTTGATTCTGAGGAAGGAGCCGCACGGCGGTTGCGTTAGCACGATGGAGGCCGTGGCGAGGTGTTTGAGAGTAATGGAAGCGGATGATGGGGCGGAGATTGAGAGGAGATTGATTGGGGTTTTGAGGGAAATGGTTAGGTTACAGGCTGGGTTCTTGAAGCCCATGAACCCTAGGCCCAAATTGTTGAACATGAAGAAGATGAAAAAGATGAAGATGAATGAGAGGGAGGATGAAATTGAATGA

Coding sequence (CDS)

ATGCCATACGTTACTCAAAAAGCAGCTAAACTCGTGAAAGCAACACACCGCATGGAGCCAACAAACAACCACCACGAGTCCGCCGCCGCAGCCACCGGAAATTCGTCTTCCTCGCCGCCACCACGGCGGACAATTTGCCCTAATTGCACCCGTCCCCAACCAGTCTGCCTCTGCAAGTTCCTTCCATCCCCGCCAATCGCAACCAGAACAAAAATCATCATCCTCCAACATCCTCACGAGGCTCAACACAAGCTCTCCACCACTCCGATCCTCACCAAATGCCTCCAAAACGCAACCACCATCGTCAATCGCCGCCTCAAGCCAGGCCTCTCCGATCTCCTCGACCGATCGCCTCCCGCCGTCTTCCTCTTCCCGCCGACACCTCACGACTCCTCGCCGCCGATCAACGTATCGGAACTCGACCTGACGTCCTCGGCGGATTCCGATCTGGTCCTGATAGCGTTCGATGGAACGTGGAAGCACGCGAAGGAGATGGTGCGATCGAGCGAGGAGTTTCTGTCGAGGTTCGCGAGGAGAGTTTGCTTGGATTTCGACGAGAGCGTGGAGGGCGGAAGCATTTTCGATTCGGAGTTGATTCTGAGGAAGGAGCCGCACGGCGGTTGCGTTAGCACGATGGAGGCCGTGGCGAGGTGTTTGAGAGTAATGGAAGCGGATGATGGGGCGGAGATTGAGAGGAGATTGATTGGGGTTTTGAGGGAAATGGTTAGGTTACAGGCTGGGTTCTTGAAGCCCATGAACCCTAGGCCCAAATTGTTGAACATGAAGAAGATGAAAAAGATGAAGATGAATGAGAGGGAGGATGAAATTGAATGA

Protein sequence

MPYVTQKAAKLVKATHRMEPTNNHHESAAAATGNSSSSPPPRRTICPNCTRPQPVCLCKFLPSPPIATRTKIIILQHPHEAQHKLSTTPILTKCLQNATTIVNRRLKPGLSDLLDRSPPAVFLFPPTPHDSSPPINVSELDLTSSADSDLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLDFDESVEGGSIFDSELILRKEPHGGCVSTMEAVARCLRVMEADDGAEIERRLIGVLREMVRLQAGFLKPMNPRPKLLNMKKMKKMKMNEREDEIE

Homology

[Close]

BLAST of Tan0012880 vs. ExPASy Swiss-Prot
Match: Q8NBA8 (tRNA-uridine aminocarboxypropyltransferase 2 OS=Homo sapiens OX=9606 GN=DTWD2 PE=1 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.0e-15
Identity = 71/249 (28.51%), Postives = 113/249 (45.38%), Query Frame = 0


Query: 39  PPPRRTICPNCTRPQPVCLCKFLPSPPIATRTKIIILQHPHEAQHKLSTTPILTKCL--Q 98
           P  RR  C  C+RPQ VCLC FLP+ P+   T + I+QHP E    L T P+L  CL   
Sbjct: 62  PAERRPECTRCSRPQKVCLCPFLPAHPLHISTHLYIIQHPAEENKVLRTVPLLAACLPQD 121

Query: 99  NATTIVNRRLK----PGLSDLLDRSPPAVFLFPPTPHDSSPPINVSELDLTSSADSDLVL 158
                + RR      P LS +  R    + L+P      +   N+ E  L S      ++
Sbjct: 122 KCKVKIGRRFSEERDPELSTVC-RKSGTLILYP-----GAEAANLEEFILDSPVYPSTII 181

Query: 159 IAFDGTWKHAKEMVRSSEEFLSRFARRVCLDFDESVEGGSIFDSELILRKEPHGGCVSTM 218
           I  DGTW  AK++          F +       + V+  +   S+ ++R +P   C+ST+
Sbjct: 182 I-IDGTWSQAKDI----------FYKNSLFRHPKQVQLKTSISSQYVIRMQPTNRCLSTL 241

Query: 219 EAVARCLRVMEADDGAEIERRLIGVLREM----------VRLQAGFL--KPMNPRPKLLN 270
           E  A  L ++E ++   I+  L+  L+ +          +RL    L    + P+P   N
Sbjct: 242 ECAAVALSILEKNN--YIQETLLRPLQALCSFQLQHGAQIRLSKEHLLKNGLYPKPMPKN 291

[Close]

BLAST of Tan0012880 vs. ExPASy Swiss-Prot
Match: Q4R7M4 (tRNA-uridine aminocarboxypropyltransferase 2 OS=Macaca fascicularis OX=9541 GN=DTWD2 PE=2 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.1e-14
Identity = 71/243 (29.22%), Postives = 110/243 (45.27%), Query Frame = 0


Query: 39  PPPRRTICPNCTRPQPVCLCKFLPSPPIATRTKIIILQHPHEAQHKLSTTPILTKCL--Q 98
           P  RR  C  C+RPQ VCLC FLP+ P+   T + I+QHP E    L T P+L  CL   
Sbjct: 62  PAKRRPECSRCSRPQKVCLCPFLPAHPLHISTHLYIIQHPAEENKVLRTVPLLAACLPQD 121

Query: 99  NATTIVNRRLK----PGLSDLLDRSPPAVFLFPPTPHDSSPPINVSELDLTSSADSDLVL 158
                + RR      P LS +  R    + L+P      +   N+ E  L S      ++
Sbjct: 122 KCKVKIGRRFSEERDPELSTVC-RKSGTLILYP-----GAEAANLEEFILDSPVYPSTII 181

Query: 159 IAFDGTWKHAKEMVRSSEEFLSRFARRVCLDFDESVEGGSIFDSELILRKEPHGGCVSTM 218
           I  DGTW  AK++          F +       + V+  +   S+ ++R +P   C+ST+
Sbjct: 182 I-IDGTWSQAKDI----------FYKNSLFRHPKQVQLKTSISSQYVIRMQPTNRCLSTL 241

Query: 219 EAVARCLRVMEADDGAEIERRLIGVLREM--VRLQAGFLKPMNPRPKLLNMKKMKKMKMN 274
           E  A  L ++E ++   I+  L+  L+ +   +LQ G    ++    L N    K M  N
Sbjct: 242 ECAAVALSILEKNN--YIQETLLRPLQALCSFQLQHGAQIRLSKEHLLKNGLYTKPMPKN 285

[Close]

BLAST of Tan0012880 vs. ExPASy Swiss-Prot
Match: Q9D0U1 (tRNA-uridine aminocarboxypropyltransferase 2 OS=Mus musculus OX=10090 GN=Dtwd2 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.7e-14
Identity = 72/267 (26.97%), Postives = 119/267 (44.57%), Query Frame = 0


Query: 29  AAATGNSSSSP---------PPRRTICPNCTRPQPVCLCKFLPSPPIATRTKIIILQHPH 88
           A A+G+S+S+            RR  C  C+RPQ VCLC +LP  P+   T + I+QHP 
Sbjct: 43  AGASGDSTSADGLWGLPVEHAERRPECGRCSRPQKVCLCPYLPVRPLQISTHLYIIQHPA 102

Query: 89  EAQHKLSTTPILTKCL--QNATTIVNRRLKPGLSDLLD---RSPPAVFLFPPTPHDSSPP 148
           E    L T P+L  CL     T  + RR        L    R    + L+P      +  
Sbjct: 103 EESRVLRTVPLLAACLPPDRCTVKIGRRFSEERDVELATVCRDSGTLILYP-----GAEA 162

Query: 149 INVSELDLTSSADSDLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLDFDESVEGGSIF 208
            N+ E  L S      +++  DGTW  AK++          F +       + V+  +  
Sbjct: 163 TNLEEFILDSPVYPSTIIL-IDGTWSQAKDI----------FYKNSLFRLPKQVQLKTSV 222

Query: 209 DSELILRKEPHGGCVSTMEAVARCLRVMEADDGAEIERRLIGVLREM----------VRL 268
            S+ ++R +P   C+ST+E  A  L ++E ++   I+  L+  L+ +          +RL
Sbjct: 223 CSQYVIRMQPTNRCLSTLECAAVALSILEKNNC--IQETLLRPLQALCSFQLQHGAQIRL 282

Query: 269 QAGFL--KPMNPRPKLLNMKKMKKMKM 270
              +L    + P+P   N +K++KM++
Sbjct: 283 SKEYLLRNGLYPKPMPKNKRKLRKMEL 291

[Close]

BLAST of Tan0012880 vs. NCBI nr
Match: XP_023544253.1 (DTW domain-containing protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 431.8 bits (1109), Expect = 4.5e-117
Identity = 228/261 (87.36%), Postives = 243/261 (93.10%), Query Frame = 0


Query: 18  MEPTNNHHESAAAATGNSSSSPPPRRTICPNCTRPQPVCLCKFLPSPPIATRTKIIILQH 77
           MEPTN+HH SAA  + +++SSPP RR+ICPNCTRPQPVCLCKFLPSPPIAT+T+IIILQH
Sbjct: 1   MEPTNHHHNSAAGYS-SAASSPPARRSICPNCTRPQPVCLCKFLPSPPIATKTQIIILQH 60

Query: 78  PHEAQHKLSTTPILTKCLQNATTIVNRRLKPGLSDLLDRSPPAVFLFPPTPHDSSPPINV 137
           PHEAQHKLSTTPILTKCL NATTIVNRRLKPGLSDLLDRSP AV+LFPPTPH SSPPIN+
Sbjct: 61  PHEAQHKLSTTPILTKCLLNATTIVNRRLKPGLSDLLDRSPTAVYLFPPTPH-SSPPINI 120

Query: 138 SELDLTSSA--DSDLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLDFDESVEGGSIFD 197
           SELDLTSS+  DS+LVLIAFDGTWKHAKEMVRSSEEFLSRFARR+CLDFDESV+GGSIFD
Sbjct: 121 SELDLTSSSSPDSNLVLIAFDGTWKHAKEMVRSSEEFLSRFARRICLDFDESVDGGSIFD 180

Query: 198 SELILRKEPHGGCVSTMEAVARCLRVMEADDGAEIERRLIGVLREMVRLQAGFLKPMNPR 257
           SELILRKEPHGGCVSTMEAVARCLRVMEA DGAEIE RLIGVLREMVRLQAGFLKPMNPR
Sbjct: 181 SELILRKEPHGGCVSTMEAVARCLRVMEA-DGAEIEVRLIGVLREMVRLQAGFLKPMNPR 240

Query: 258 PKLLNMKKMKKMKMNEREDEI 277
           PKLL  KK  K K +EREDEI
Sbjct: 241 PKLLKTKKKMKNK-SEREDEI 257

[Close]

BLAST of Tan0012880 vs. NCBI nr
Match: XP_022928716.1 (DTW domain-containing protein 2 [Cucurbita moschata])

HSP 1 Score: 429.5 bits (1103), Expect = 2.2e-116
Identity = 228/261 (87.36%), Postives = 239/261 (91.57%), Query Frame = 0


Query: 18  MEPTNNHHESAAAATGNSSSSPPPRRTICPNCTRPQPVCLCKFLPSPPIATRTKIIILQH 77
           MEPTN+HH SAA       SSPP RR+ICPNCTRPQPVCLCKFLPSPPIAT+T+IIILQH
Sbjct: 1   MEPTNHHHNSAA-------SSPPARRSICPNCTRPQPVCLCKFLPSPPIATKTQIIILQH 60

Query: 78  PHEAQHKLSTTPILTKCLQNATTIVNRRLKPGLSDLLDRSPPAVFLFPPTPHDSSPPINV 137
           PHEAQHKLSTTPILTKCL NATTIVNRRLKPGLSDLLDRSP AV+LFPPTPH SSPPIN+
Sbjct: 61  PHEAQHKLSTTPILTKCLLNATTIVNRRLKPGLSDLLDRSPTAVYLFPPTPH-SSPPINI 120

Query: 138 SELDLTSSA--DSDLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLDFDESVEGGSIFD 197
           SELDLTSS+  DS+LVLIAFDGTWKHAKEMVRSSEEFLSRFARR+CLDFDESV+GGSIFD
Sbjct: 121 SELDLTSSSSPDSNLVLIAFDGTWKHAKEMVRSSEEFLSRFARRICLDFDESVDGGSIFD 180

Query: 198 SELILRKEPHGGCVSTMEAVARCLRVMEADDGAEIERRLIGVLREMVRLQAGFLKPMNPR 257
           SELILRKEPHGGCVSTMEAVARCLRVMEA DGAEIE RLIGVLREMVRLQAGFLKPMNPR
Sbjct: 181 SELILRKEPHGGCVSTMEAVARCLRVMEA-DGAEIEVRLIGVLREMVRLQAGFLKPMNPR 240

Query: 258 PKLLNMKKMKKMKMNEREDEI 277
           PKLL  KK  K K +EREDEI
Sbjct: 241 PKLLKTKKKTKNK-SEREDEI 251

[Close]

BLAST of Tan0012880 vs. NCBI nr
Match: XP_022967888.1 (DTW domain-containing protein 2 [Cucurbita maxima])

HSP 1 Score: 427.9 bits (1099), Expect = 6.5e-116
Identity = 225/261 (86.21%), Postives = 241/261 (92.34%), Query Frame = 0


Query: 18  MEPTNNHHESAAAATGNSSSSPPPRRTICPNCTRPQPVCLCKFLPSPPIATRTKIIILQH 77
           MEPTN+HH SAA  + ++SSSPPPRR+ICPNCTRPQ VCLCKFLPSPPIAT+T+IIILQH
Sbjct: 1   MEPTNHHHNSAAGYS-SASSSPPPRRSICPNCTRPQLVCLCKFLPSPPIATKTQIIILQH 60

Query: 78  PHEAQHKLSTTPILTKCLQNATTIVNRRLKPGLSDLLDRSPPAVFLFPPTPHDSSPPINV 137
           PHEAQHKLSTTPILTKCL NATTIVNRRLKPGLSDLLDRSP AV+LFPPTPH SSPPIN+
Sbjct: 61  PHEAQHKLSTTPILTKCLLNATTIVNRRLKPGLSDLLDRSPTAVYLFPPTPH-SSPPINI 120

Query: 138 SELDLT--SSADSDLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLDFDESVEGGSIFD 197
           SELDLT  SS+DS+LVLIAFDGTWKHAKEMVRSSEEFLSRFARR+CLDFDESV+GG+IFD
Sbjct: 121 SELDLTSSSSSDSNLVLIAFDGTWKHAKEMVRSSEEFLSRFARRICLDFDESVDGGTIFD 180

Query: 198 SELILRKEPHGGCVSTMEAVARCLRVMEADDGAEIERRLIGVLREMVRLQAGFLKPMNPR 257
           SELILRKEPHGGCVSTMEAVARCLRVMEA DGAEIE RLIGVLREMVRLQAGFLKPMNPR
Sbjct: 181 SELILRKEPHGGCVSTMEAVARCLRVMEA-DGAEIELRLIGVLREMVRLQAGFLKPMNPR 240

Query: 258 PKLLNMKKMKKMKMNEREDEI 277
           PKL+ MK       +EREDEI
Sbjct: 241 PKLVKMK-----NKSEREDEI 253

[Close]

BLAST of Tan0012880 vs. NCBI nr
Match: KAG7033522.1 (DTW domain-containing protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 424.9 bits (1091), Expect = 5.5e-115
Identity = 226/261 (86.59%), Postives = 237/261 (90.80%), Query Frame = 0


Query: 18  MEPTNNHHESAAAATGNSSSSPPPRRTICPNCTRPQPVCLCKFLPSPPIATRTKIIILQH 77
           ME TN+HH SAA       S PP RR+ICPNCTRPQPVCLCKFLPSPPIAT+T+IIILQH
Sbjct: 1   MESTNHHHNSAA-------SPPPARRSICPNCTRPQPVCLCKFLPSPPIATKTQIIILQH 60

Query: 78  PHEAQHKLSTTPILTKCLQNATTIVNRRLKPGLSDLLDRSPPAVFLFPPTPHDSSPPINV 137
           PHEAQHKLSTTPILTKCL NATTIVNRRLKPGLSDLLDRSP AV+LFPPTPH SSPPIN+
Sbjct: 61  PHEAQHKLSTTPILTKCLLNATTIVNRRLKPGLSDLLDRSPTAVYLFPPTPH-SSPPINI 120

Query: 138 SELDLTSSA--DSDLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLDFDESVEGGSIFD 197
           SELDLTSS+  DS+LVLIAFDGTWKHAKEMVRSSEEFLSRFARR+CLDFDESV+GGSIFD
Sbjct: 121 SELDLTSSSSPDSNLVLIAFDGTWKHAKEMVRSSEEFLSRFARRICLDFDESVDGGSIFD 180

Query: 198 SELILRKEPHGGCVSTMEAVARCLRVMEADDGAEIERRLIGVLREMVRLQAGFLKPMNPR 257
           SELILRKEPHGGCVSTMEAVARCLRVMEA DGAEIE RLIGVLREMVRLQAGFLKPMNPR
Sbjct: 181 SELILRKEPHGGCVSTMEAVARCLRVMEA-DGAEIELRLIGVLREMVRLQAGFLKPMNPR 240

Query: 258 PKLLNMKKMKKMKMNEREDEI 277
           PKLL  KK  K K +EREDEI
Sbjct: 241 PKLLKTKKKTKNK-SEREDEI 251

[Close]

BLAST of Tan0012880 vs. NCBI nr
Match: XP_038883027.1 (tRNA-uridine aminocarboxypropyltransferase 2 [Benincasa hispida])

HSP 1 Score: 413.7 bits (1062), Expect = 1.3e-111
Identity = 218/258 (84.50%), Postives = 235/258 (91.09%), Query Frame = 0


Query: 18  MEPTNNHHESAAAATGNSSSSPPPRRTICPNCTRPQPVCLCKFLPSPPIATRTKIIILQH 77
           ME TNNH  + AA   +SSSSPPPRR+ICPNC+RPQPVCLCKFLPS PIAT+TKII+LQH
Sbjct: 1   MEATNNH--NPAAGNSSSSSSPPPRRSICPNCSRPQPVCLCKFLPSSPIATKTKIILLQH 60

Query: 78  PHEAQHKLSTTPILTKCLQNATTIVNRRLKPGLSDLLDRSPPAVFLFPPTPHDSSPPINV 137
           PHEAQHKLSTTPILTKCL NATTIVNRRLKPGLS+LLDRSPPAVFLFPPTPH S+PPIN+
Sbjct: 61  PHEAQHKLSTTPILTKCLLNATTIVNRRLKPGLSELLDRSPPAVFLFPPTPH-STPPINI 120

Query: 138 SELDLTSSADSDLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLDFDESVEGGSIFDSE 197
           SEL++T    ++LVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLDFDESVEGGSIFDSE
Sbjct: 121 SELNIT----ANLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLDFDESVEGGSIFDSE 180

Query: 198 LILRKEPHGGCVSTMEAVARCLRVMEADDGAEIERRLIGVLREMVRLQAGFLKPMNPRPK 257
           LILRKEPHGGCVSTMEAVARCLRVME  DGA IE++LI VLREMVRLQAGFLKPMNPRPK
Sbjct: 181 LILRKEPHGGCVSTMEAVARCLRVME-PDGAAIEKKLIEVLREMVRLQAGFLKPMNPRPK 240

Query: 258 LLNMKKMKKMKMNEREDE 276
           LL +K  KK KM+E EDE
Sbjct: 241 LLKIKNRKK-KMSEGEDE 249

[Close]

BLAST of Tan0012880 vs. ExPASy TrEMBL
Match: A0A6J1EL33 (tRNA-uridine aminocarboxypropyltransferase OS=Cucurbita moschata OX=3662 GN=LOC111435542 PE=4 SV=1)

HSP 1 Score: 429.5 bits (1103), Expect = 1.1e-116
Identity = 228/261 (87.36%), Postives = 239/261 (91.57%), Query Frame = 0


Query: 18  MEPTNNHHESAAAATGNSSSSPPPRRTICPNCTRPQPVCLCKFLPSPPIATRTKIIILQH 77
           MEPTN+HH SAA       SSPP RR+ICPNCTRPQPVCLCKFLPSPPIAT+T+IIILQH
Sbjct: 1   MEPTNHHHNSAA-------SSPPARRSICPNCTRPQPVCLCKFLPSPPIATKTQIIILQH 60

Query: 78  PHEAQHKLSTTPILTKCLQNATTIVNRRLKPGLSDLLDRSPPAVFLFPPTPHDSSPPINV 137
           PHEAQHKLSTTPILTKCL NATTIVNRRLKPGLSDLLDRSP AV+LFPPTPH SSPPIN+
Sbjct: 61  PHEAQHKLSTTPILTKCLLNATTIVNRRLKPGLSDLLDRSPTAVYLFPPTPH-SSPPINI 120

Query: 138 SELDLTSSA--DSDLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLDFDESVEGGSIFD 197
           SELDLTSS+  DS+LVLIAFDGTWKHAKEMVRSSEEFLSRFARR+CLDFDESV+GGSIFD
Sbjct: 121 SELDLTSSSSPDSNLVLIAFDGTWKHAKEMVRSSEEFLSRFARRICLDFDESVDGGSIFD 180

Query: 198 SELILRKEPHGGCVSTMEAVARCLRVMEADDGAEIERRLIGVLREMVRLQAGFLKPMNPR 257
           SELILRKEPHGGCVSTMEAVARCLRVMEA DGAEIE RLIGVLREMVRLQAGFLKPMNPR
Sbjct: 181 SELILRKEPHGGCVSTMEAVARCLRVMEA-DGAEIEVRLIGVLREMVRLQAGFLKPMNPR 240

Query: 258 PKLLNMKKMKKMKMNEREDEI 277
           PKLL  KK  K K +EREDEI
Sbjct: 241 PKLLKTKKKTKNK-SEREDEI 251

[Close]

BLAST of Tan0012880 vs. ExPASy TrEMBL
Match: A0A6J1HWG2 (tRNA-uridine aminocarboxypropyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111467264 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.1e-116
Identity = 225/261 (86.21%), Postives = 241/261 (92.34%), Query Frame = 0


Query: 18  MEPTNNHHESAAAATGNSSSSPPPRRTICPNCTRPQPVCLCKFLPSPPIATRTKIIILQH 77
           MEPTN+HH SAA  + ++SSSPPPRR+ICPNCTRPQ VCLCKFLPSPPIAT+T+IIILQH
Sbjct: 1   MEPTNHHHNSAAGYS-SASSSPPPRRSICPNCTRPQLVCLCKFLPSPPIATKTQIIILQH 60

Query: 78  PHEAQHKLSTTPILTKCLQNATTIVNRRLKPGLSDLLDRSPPAVFLFPPTPHDSSPPINV 137
           PHEAQHKLSTTPILTKCL NATTIVNRRLKPGLSDLLDRSP AV+LFPPTPH SSPPIN+
Sbjct: 61  PHEAQHKLSTTPILTKCLLNATTIVNRRLKPGLSDLLDRSPTAVYLFPPTPH-SSPPINI 120

Query: 138 SELDLT--SSADSDLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLDFDESVEGGSIFD 197
           SELDLT  SS+DS+LVLIAFDGTWKHAKEMVRSSEEFLSRFARR+CLDFDESV+GG+IFD
Sbjct: 121 SELDLTSSSSSDSNLVLIAFDGTWKHAKEMVRSSEEFLSRFARRICLDFDESVDGGTIFD 180

Query: 198 SELILRKEPHGGCVSTMEAVARCLRVMEADDGAEIERRLIGVLREMVRLQAGFLKPMNPR 257
           SELILRKEPHGGCVSTMEAVARCLRVMEA DGAEIE RLIGVLREMVRLQAGFLKPMNPR
Sbjct: 181 SELILRKEPHGGCVSTMEAVARCLRVMEA-DGAEIELRLIGVLREMVRLQAGFLKPMNPR 240

Query: 258 PKLLNMKKMKKMKMNEREDEI 277
           PKL+ MK       +EREDEI
Sbjct: 241 PKLVKMK-----NKSEREDEI 253

[Close]

BLAST of Tan0012880 vs. ExPASy TrEMBL
Match: A0A5A7TJW5 (tRNA-uridine aminocarboxypropyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00690 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 7.0e-108
Identity = 214/258 (82.95%), Postives = 225/258 (87.21%), Query Frame = 0


Query: 18  MEPTNNHHESAAAATGNSSSSPPPRRTICPNCTRPQPVCLCKFLPSPPIATRTKIIILQH 77
           ME TNNH+     A G SSSSPPPRR ICPNC RPQPVCLCKFLPS PIAT+TKIIILQH
Sbjct: 1   MESTNNHN----FAAGYSSSSPPPRRPICPNCNRPQPVCLCKFLPSSPIATKTKIIILQH 60

Query: 78  PHEAQHKLSTTPILTKCLQNATTIVNRRLKPGLSDLLDRSPPAVFLFPPTPHDSSPPINV 137
           PHE+QHKLSTTPILTKCL NATTIVNRRLKPGLS LLD+SPPAVFLFPPTPH SSPPIN+
Sbjct: 61  PHESQHKLSTTPILTKCLLNATTIVNRRLKPGLSKLLDQSPPAVFLFPPTPH-SSPPINI 120

Query: 138 SELDLTSSADSDLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLDFDESVEGGSIFDSE 197
           S+L++T     DLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLD DESVEGGSIFDSE
Sbjct: 121 SDLNIT----EDLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLDIDESVEGGSIFDSE 180

Query: 198 LILRKEPHGGCVSTMEAVARCLRVMEADDGAEIERRLIGVLREMVRLQAGFLKPMNPRPK 257
           LILRKEPHGGCVSTMEAVARCLRVME  DGA +E +LIGVLREMVRLQAGFLKPMNPRPK
Sbjct: 181 LILRKEPHGGCVSTMEAVARCLRVMEL-DGAAVEEKLIGVLREMVRLQAGFLKPMNPRPK 240

Query: 258 LLNMKKMKKMKMNEREDE 276
           LL   K  K K +  EDE
Sbjct: 241 LL---KNFKQKTSVMEDE 245

[Close]

BLAST of Tan0012880 vs. ExPASy TrEMBL
Match: A0A5D3D883 (tRNA-uridine aminocarboxypropyltransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold307G00010 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 7.7e-107
Identity = 213/258 (82.56%), Postives = 224/258 (86.82%), Query Frame = 0


Query: 18  MEPTNNHHESAAAATGNSSSSPPPRRTICPNCTRPQPVCLCKFLPSPPIATRTKIIILQH 77
           ME TNNH+     A G SSSS PPRR ICPNC RPQPVCLCKFLPS PIAT+TKIIILQH
Sbjct: 1   MESTNNHN----FAAGYSSSSRPPRRPICPNCNRPQPVCLCKFLPSSPIATKTKIIILQH 60

Query: 78  PHEAQHKLSTTPILTKCLQNATTIVNRRLKPGLSDLLDRSPPAVFLFPPTPHDSSPPINV 137
           PHE+QHKLSTTPILTKCL NATTIVNRRLKPGLS LLD+SPPAVFLFPPTPH SSPPIN+
Sbjct: 61  PHESQHKLSTTPILTKCLLNATTIVNRRLKPGLSKLLDQSPPAVFLFPPTPH-SSPPINI 120

Query: 138 SELDLTSSADSDLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLDFDESVEGGSIFDSE 197
           S+L++T     DLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLD DESVEGGSIFDSE
Sbjct: 121 SDLNIT----EDLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLDIDESVEGGSIFDSE 180

Query: 198 LILRKEPHGGCVSTMEAVARCLRVMEADDGAEIERRLIGVLREMVRLQAGFLKPMNPRPK 257
           LILRKEPHGGCVSTMEAVARCLRVME  DGA +E +LIGVLREMVRLQAGFLKPMNPRPK
Sbjct: 181 LILRKEPHGGCVSTMEAVARCLRVMEL-DGAAVEEKLIGVLREMVRLQAGFLKPMNPRPK 240

Query: 258 LLNMKKMKKMKMNEREDE 276
           LL   K  K K +  EDE
Sbjct: 241 LL---KNFKQKTSVMEDE 245

[Close]

BLAST of Tan0012880 vs. ExPASy TrEMBL
Match: A0A0A0KW36 (tRNA-uridine aminocarboxypropyltransferase OS=Cucumis sativus OX=3659 GN=Csa_4G165850 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 1.2e-104
Identity = 209/258 (81.01%), Postives = 222/258 (86.05%), Query Frame = 0


Query: 18  MEPTNNHHESAAAATGNSSSSPPPRRTICPNCTRPQPVCLCKFLPSPPIATRTKIIILQH 77
           ME  NNH      A G SSSS PPRR+IC NC RPQPVCLCKFLPSPPIAT+TKIIILQH
Sbjct: 1   MESRNNHD----LAAGYSSSSTPPRRSICSNCNRPQPVCLCKFLPSPPIATKTKIIILQH 60

Query: 78  PHEAQHKLSTTPILTKCLQNATTIVNRRLKPGLSDLLDRSPPAVFLFPPTPHDSSPPINV 137
           PHE+QHKLSTTPILTKCL NATTIVNRRLKPGLS LLD+SP AVFLFPPTPH SSPPIN+
Sbjct: 61  PHESQHKLSTTPILTKCLLNATTIVNRRLKPGLSKLLDQSPHAVFLFPPTPH-SSPPINI 120

Query: 138 SELDLTSSADSDLVLIAFDGTWKHAKEMVRSSEEFLSRFARRVCLDFDESVEGGSIFDSE 197
           S+L++T     DLVLIAFDGTWKHAKEMVRSSEE+LSRFARRVCLD DESVEGGSIFDSE
Sbjct: 121 SDLNIT----EDLVLIAFDGTWKHAKEMVRSSEEYLSRFARRVCLDIDESVEGGSIFDSE 180

Query: 198 LILRKEPHGGCVSTMEAVARCLRVMEADDGAEIERRLIGVLREMVRLQAGFLKPMNPRPK 257
           LILRKEPHGGCVSTMEAVARCLRVME  DGA +E +LIGVLREMVRLQAGFLKPMNPRPK
Sbjct: 181 LILRKEPHGGCVSTMEAVARCLRVMEL-DGAAVEEKLIGVLREMVRLQAGFLKPMNPRPK 240

Query: 258 LLNMKKMKKMKMNEREDE 276
           LL   K  K + +  EDE
Sbjct: 241 LL---KSLKKQTSVTEDE 245

[Close]

BLAST of Tan0012880 vs. TAIR 10
Match: AT2G41750.1 (DTW domain-containing protein )

HSP 1 Score: 221.1 bits (562), Expect = 1.1e-57
Identity = 136/250 (54.40%), Postives = 168/250 (67.20%), Query Frame = 0


Query: 42  RRTICPNCTRPQPVCLCKFLPSPPIATRTKIIILQHPHEAQHKLSTTPILTKCLQNATTI 101
           RR IC NC RP  +CLC  LP+  I T T+IIIL HPHE++HKL+TTP+LTK L N T I
Sbjct: 10  RRQICDNCDRPNAICLCHVLPADLIPTNTEIIILHHPHESRHKLNTTPLLTKSLLNVTRI 69

Query: 102 VNRRL------KPGLSDLLDRSPPAVFLFPPTPHDSSPPINVSE---LDLTS----SADS 161
             RRL        G + L   +PP ++LFP +P  SSP + +SE   L+L +    S   
Sbjct: 70  PARRLLRRHISTAGGTAL--PAPPTIYLFPSSP--SSPAVTISEFKSLNLLNHREISNPP 129

Query: 162 DLVLIAFDGTWKHAKEMVRSSEEFLSRF-ARRVCLD--FDESVEGGSIFDSELILRKEPH 221
            L LI FD TWKHAKEMV++SE  L    A RVCLD   D SV GG+I+DSEL+LRKEP 
Sbjct: 130 PLRLIVFDATWKHAKEMVKASEVVLREAGAVRVCLDTEIDASVSGGTIYDSELVLRKEPF 189

Query: 222 GGCVSTMEAVARCLRVMEADDGAEIERRLIGVLREMVRLQAGFLKPMNPRPKLLNMKKMK 276
           GGCV+T EAVARCL  +E  DG EIER+LI VL+EMVR Q+ +LKPM PRPKLL  K+ +
Sbjct: 190 GGCVTTAEAVARCLGAIE-PDGEEIERKLISVLKEMVRFQSKYLKPMKPRPKLLK-KRFQ 249

[Close]

BLAST of Tan0012880 vs. TAIR 10
Match: AT5G54880.1 (DTW domain-containing protein )

HSP 1 Score: 47.4 bits (111), Expect = 2.2e-05
Identity = 23/56 (41.07%), Postives = 33/56 (58.93%), Query Frame = 0


Query: 42 RRTICPNCTRPQPVCLCKFLPSPPIATRTKIIILQHPHEAQHKLSTTPILTKCLQN 98
          +R  CP+C +P  +CLCK + SP    +  I ILQH  E +H L++T I    L+N
Sbjct: 44 KRPTCPSCDKPSQLCLCKKMRSPCFDNQVSITILQHSLERKHALNSTRIARLGLKN 99

The following BLAST results are available for this feature:

BLAST of Tan0012880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8NBA8	1.0e-15	28.51	tRNA-uridine aminocarboxypropyltransferase 2 OS=Homo sapiens OX=9606 GN=DTWD2 PE...	[more]
Q4R7M4	1.1e-14	29.22	tRNA-uridine aminocarboxypropyltransferase 2 OS=Macaca fascicularis OX=9541 GN=D...	[more]
Q9D0U1	5.7e-14	26.97	tRNA-uridine aminocarboxypropyltransferase 2 OS=Mus musculus OX=10090 GN=Dtwd2 P...	[more]

BLAST of Tan0012880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023544253.1	4.5e-117	87.36	DTW domain-containing protein 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022928716.1	2.2e-116	87.36	DTW domain-containing protein 2 [Cucurbita moschata]	[more]
XP_022967888.1	6.5e-116	86.21	DTW domain-containing protein 2 [Cucurbita maxima]	[more]
KAG7033522.1	5.5e-115	86.59	DTW domain-containing protein 2, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]
XP_038883027.1	1.3e-111	84.50	tRNA-uridine aminocarboxypropyltransferase 2 [Benincasa hispida]	[more]

BLAST of Tan0012880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EL33	1.1e-116	87.36	tRNA-uridine aminocarboxypropyltransferase OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1HWG2	3.1e-116	86.21	tRNA-uridine aminocarboxypropyltransferase OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A5A7TJW5	7.0e-108	82.95	tRNA-uridine aminocarboxypropyltransferase OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A5D3D883	7.7e-107	82.56	tRNA-uridine aminocarboxypropyltransferase OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A0A0KW36	1.2e-104	81.01	tRNA-uridine aminocarboxypropyltransferase OS=Cucumis sativus OX=3659 GN=Csa_4G1...	[more]

BLAST of Tan0012880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41750.1	1.1e-57	54.40	DTW domain-containing protein	[more]
AT5G54880.1	2.2e-05	41.07	DTW domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005636	DTW	SMART	SM01144	DTW_2a	coord: 42..250 e-value: 9.2E-45 score: 164.7
IPR005636	DTW	PFAM	PF03942	DTW	coord: 44..245 e-value: 7.8E-41 score: 139.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..43
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..43
None	No IPR available	PANTHER	PTHR21392:SF0	DTW DOMAIN-CONTAINING PROTEIN 2	coord: 19..260
IPR039262	DTW domain-containing protein DTWD2/YfiP	PANTHER	PTHR21392	UNCHARACTERIZED	coord: 19..260

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0012880.1	Tan0012880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008033	tRNA processing
molecular_function	GO:0016432	tRNA-uridine aminocarboxypropyltransferase activity