Tan0012843 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTCCTCAAAGATTTGTTTCTGTATTCCTTGCCATAAAAATGGCCACAAAGCTGATGGAGGATCAGAGAAATCTTCCAAATCAAAGCCTTCCCGCCGCAAATCTCGCCGTGGTGCAAAAGAAGGTAAGCATTCTTCTAGTAGTGATAGTAGTGGAAATGGAAACACAGTTGATGCAAGTGCAGGCAGTGCCGCAGCCGTGGCTGCTGTTGCGGTTGCGGTCACGGCGGTGACCATGGATGACTTTGAAGATGACGGTGGCAGCACCCATGGCCACGGCGGTGAAGGAGGAGGCGGTGGAGGTGGAGGTGGCGGAGATTAG ATGGAGTCCTCAAAGATTTGTTTCTGTATTCCTTGCCATAAAAATGGCCACAAAGCTGATGGAGGATCAGAGAAATCTTCCAAATCAAAGCCTTCCCGCCGCAAATCTCGCCGTGGTGCAAAAGAAGGTAAGCATTCTTCTAGTAGTGATAGTAGTGGAAATGGAAACACAGTTGATGCAAGTGCAGGCAGTGCCGCAGCCGTGGCTGCTGTTGCGGTTGCGGTCACGGCGGTGACCATGGATGACTTTGAAGATGACGGTGGCAGCACCCATGGCCACGGCGGTGAAGGAGGAGGCGGTGGAGGTGGAGGTGGCGGAGATTAG ATGGAGTCCTCAAAGATTTGTTTCTGTATTCCTTGCCATAAAAATGGCCACAAAGCTGATGGAGGATCAGAGAAATCTTCCAAATCAAAGCCTTCCCGCCGCAAATCTCGCCGTGGTGCAAAAGAAGGTAAGCATTCTTCTAGTAGTGATAGTAGTGGAAATGGAAACACAGTTGATGCAAGTGCAGGCAGTGCCGCAGCCGTGGCTGCTGTTGCGGTTGCGGTCACGGCGGTGACCATGGATGACTTTGAAGATGACGGTGGCAGCACCCATGGCCACGGCGGTGAAGGAGGAGGCGGTGGAGGTGGAGGTGGCGGAGATTAG MESSKICFCIPCHKNGHKADGGSEKSSKSKPSRRKSRRGAKEGKHSSSSDSSGNGNTVDASAGSAAAVAAVAVAVTAVTMDDFEDDGGSTHGHGGEGGGGGGGGGGD Homology
BLAST of Tan0012843 vs. NCBI nr
Match: TYK15390.1 (tropomyosin [Cucumis melo var. makuwa]) HSP 1 Score: 137.1 bits (344), Expect = 8.8e-29 Identity = 86/102 (84.31%), Postives = 89/102 (87.25%), Query Frame = 0
BLAST of Tan0012843 vs. NCBI nr
Match: KAA0061866.1 (tropomyosin [Cucumis melo var. makuwa]) HSP 1 Score: 137.1 bits (344), Expect = 8.8e-29 Identity = 86/102 (84.31%), Postives = 89/102 (87.25%), Query Frame = 0
BLAST of Tan0012843 vs. NCBI nr
Match: KAG7010529.1 (hypothetical protein SDJN02_27323, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 134.4 bits (337), Expect = 5.7e-28 Identity = 91/105 (86.67%), Postives = 92/105 (87.62%), Query Frame = 0
BLAST of Tan0012843 vs. NCBI nr
Match: KAG6605437.1 (hypothetical protein SDJN03_02754, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 131.3 bits (329), Expect = 4.8e-27 Identity = 83/106 (78.30%), Postives = 87/106 (82.08%), Query Frame = 0
BLAST of Tan0012843 vs. NCBI nr
Match: KAG6570682.1 (hypothetical protein SDJN03_29597, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 131.3 bits (329), Expect = 4.8e-27 Identity = 90/105 (85.71%), Postives = 91/105 (86.67%), Query Frame = 0
BLAST of Tan0012843 vs. ExPASy TrEMBL
Match: A0A5D3CVK1 (Tropomyosin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00300 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 4.3e-29 Identity = 86/102 (84.31%), Postives = 89/102 (87.25%), Query Frame = 0
BLAST of Tan0012843 vs. ExPASy TrEMBL
Match: A0A5A7V5U9 (Tropomyosin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G001080 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 4.3e-29 Identity = 86/102 (84.31%), Postives = 89/102 (87.25%), Query Frame = 0
BLAST of Tan0012843 vs. ExPASy TrEMBL
Match: A0A0A0KFD0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188150 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 8.9e-27 Identity = 82/101 (81.19%), Postives = 85/101 (84.16%), Query Frame = 0
BLAST of Tan0012843 vs. ExPASy TrEMBL
Match: A0A6J1D515 (circumsporozoite protein-like OS=Momordica charantia OX=3673 GN=LOC111017006 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 1.3e-25 Identity = 82/106 (77.36%), Postives = 85/106 (80.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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