Tan0012778 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAAAAAACGGGGGAAAAAAGTTGTGATACGACACCGTTTTCTTGTTCTAAACTTCTCACGAAGTATTAGAAGCAGATTAGCGAGGACCGGCTTCGACATAGACCGTCGACGCGTCGTCAAAGAAGGAGGAATCGAAAGCCTCTGCGATAGAGCTGCTGCCAGAGAGGTATTTGCTTACCGCTTCTTCGATCCATTTAGTTATGGGGGGAATCATGATCTGGATCTAAAATTTACCATTCATCGGATCCATTGGGCGGAATTTGAACTGAATTGCATCTTTCAACTGGTTTTTGCTTCAGATTATCTATCTTTGCCCGACTTAGATTACTGCTGATCAGTCGATTCTTATAACTAGGTTATCTAGAACTAATCTTATTGTTTGTTGTGACGCCGAGATGTTTGTTCCCCCTGTTGTTTCGGATCCGCATTTTCTTTTTTCCTTTTGTTATTGTTTTACATTTGAAGCTCCGGATTATGCATTCTCAGTTGGTTGTATATTGTTGCTCATTTTAATCGCTGATCTTGTTTTGATCTAGTTTTTTGGCTCGTTGAGGATTCACATTGGAAAAATGGAGAGTCCTCACAATTTATAAGCTACTCCTCTCATTGCCAATTGGTTTTGAGATGGAACTACTCTAACATGGCTAGTTTGTGATTTCTGTTGCTTTCATTACTTGTGGTTTGATAGTTGACTATTGGTTATGACGTTTTTGTGCTTGTGACTATTGAAGGCCATGGCGGGGTCTGGGAGTTCCATGCTTTACTCATTTCTTCTGTTCACTGTCATTCTTTCACTTCAAGAGATGTATAGAGGAAAGTTGGCTTCTTCGGAGTTGTTTACCATACTTGGAGGATTCATAAGTTCTCTTCTGTTTCTAGTGCTTCTAACAGTAAGTTCAAGCTATTCTTTATCCTTTTACCAGCTTGACGAACGTTTGGATGCATTTTATCTTCTAGGGTATTTCTGGATCCCGTCGCCTTCTCACATTTTTTTAGTATTTAATCCCATTCTTTAAGCAGTTGCATCCACCTTCGTAACATGTTTTATCAATTACATGGACACTGATAAGTGATATACTGATATCATTTAAATAAAATTCAAGTGTAGAATTTCGTTGACTTCTATTGTGCAATAATTACTATTTAAACCTTACAAAGATTTCTGCAACATCCATTTGTTTTTCAATTCTGGCCTCCTTTCTTATAGCGTTAAAGTTCCCATTTTTATGCTTACTTTTAGTTCTTTCTCGTTTTGTAAGTATTAGTCTTTCGTGTTAGAAATGATTATGACATTTTGGACTTGGTTTTTCTGTCAAACATAATGGAGTCAGTTATTTCATGGATTTAAGACAAGTTATGCATACTTGCTGATTGTTGCATTCATCAGCATACATACTGAATTTCGGACTCAAGACCAGATGTATTCCTTGCATTACAGCATGAAGATGCAGTTTATGAGCTCAATAAGTTTAATTCAGAATGATAATTTGCATTTTCTTGATTTATATATTGCAGTTCATAGGAAACTTCCAGGAAACATGTGGCATGCGAACTGGATGGGGAGCTGGTAAGTTTTGTCACTTGTGTTCTTGTCTGTACATTTGTTTTCTGCTTAACAAGTCTGTCTAATACTAATGCAGCAGAGTGGAAATATTTGTTGATTTCTTTCAGCCCATCTATTGTCTATAAATATCCATGATTGATTGTATATTTAACTATTCCTGAAATTCTAGGGGAGGTTAAAACTCATGGCAGCTATAATCTATTTTCATGAGTGAGTCGAAAGAAATTTCTGTATGGACTTGTATCTGTATTTTTTGCTGCTATTACTGCCCTTATCTTCATATTGCTTTGATTATGCTTGTCAATCATGTTTATAGTATCGTATCTAGACTTTCAATTGCAAATTTGGAGCTGGAAGTTGATTAAAAATGAGCTTGAAAGGTTGGAAACTGTGCTCTTTTCTTTTCTTTTCTTTTTTCATTTGATAGGAAATAGAAAGGAATATATTCTAAAAAAGGGCGAATACAACCTAAGGGCTGGGGGTGGAGAAAACCCCTCCCACAAATACACCATAAGAGCCTGCCAATCATTTATAATCACAAACAAACTGAAGTTCAACTTTTTGTGTAAAGTAATCTACCAAGATTTTGTACATGGTTACAGAAAAAAATCAAAACGTAAAGACTTATCTTCAAAGGCTCTGGCATTTCTTTCTTTCCACAAGTGCCATAACAGTGCTCTGAATGCACAACTACAAACCACCTTTGCTTTCCTTTTCAAATTTCAGGCATTAAGGCCTTCCATCAGCCAATCACCCACCTTTTGAAGGAGGCAAAAGGATAAACCCAGCAGCCACGCTAAATAATTCCAAGCCTGGCTAAATAATTCCAAGCCTGAATAAGCGAAGTCGCAATGAAGGAAGAGATGATCAATAGACTCACCTTCCTTTAAACACAATATGCAACCCGATGTCAAAAGAGACCAACCTGTAAACTTCCTTTGCAACCTTTCATTAGTATTAAGACTTCTAAAAGGTAAGGACTAGAAAAAGATTTTAGTTTCCTTTGGACTTTTGTGTCTCCAAATCAAGCTAGACAGAACCATACTGATCTTACTGAGCTTTTGAGAGATATGACTTGCTAGAGTAATTTCCAGATTCCTCCTAAATCTAAAGAATTTGATCAACATCATTCCCCAAGCTCACCAAGCTAAGCTTTTCAGTTAGGGCCACCCAACTGGCAGCTGTTTAACTCTCTGTCGAGGAGGCCTCTTCTAAATCCCAGGTTCCAAGTTTGGTATCACTGTTCCAACAATAAAAAATCAAAGCTTATTTTCTAGTTGACACGACGTAAAGATCGGGGATAGTTTGATGTTTCTGCTGTTGCTGGCTTTGAAGGTGGTAAGTCACTCACGATAGTTTTTGGCAATATCCATCCAAGATCTATTTCCTTTCTTCTTTTTCTTCACCACAATAGTCTTCCATCCAAAGGGAGACATCCCATAGATGCTAACAATGACTTTCCTCCCCAGGGAATAGTTCTCTTGGGTGAACCTCCAAAGCCACTTGGTGAGAAGGGACACACTACGATGTAACAAGGATCCCACCCCTAGGCCCCCTGTTGGTAAAGCTTTCCACTCCCATTTAACCAGATTGCAACCAGGCTTATAAGTCCCACCACTCCAAATAAAATCTCTAATGATCTTTTCCATGGCTTTTCAGAGCTTTTAGGAGGGAAAAGTAATATATGGGCGAGTTGTTCAAAAACGACTGGGCCAGGGTAACTCTGTCTCCCTTTGAAAGAAGGAAGCATCTCCAAACGTCCAGCTAGTTTATCTATCAATGACTCCCAAAATGATCTTATATGGTGGTTGACCAAGGGGAAATCCAAGATAATTTACCAGTAGCGAATCAGCTTGACAATTAAAGTCTTTTGCCCAAGCAACCACTTCCTCAAAGTTCTTGTGAATCCCAAGCAAAGGTGTCTTAGCAAAATTGAAAGAGAGTCCTGAACCAACAATGATCATATTCAGAATCTCCCACCAGCTCAAGGCTACAACCTCATCAGGACAAAAAATCAACTTATCATCCGCATACTAGAGAATAGAGACTTCCACTGAATCCTTGCCTAACCAACACCTTAAAAATTCTTTTTTCCAAACAAAAGTGCACCGTGTGACTAAGAGCATCACCAATGATTGTAAAAAGGAAGGGCGACGAGGGATCTCCTTGCCTTAAACCTCTAATAGCTAGAAAGAAAAGTGCACCATGCTGTTTTCACTTATATTAATTCTTAACAGATGAATTTTCATTGATGTTTGTTGAAAACCTTAATGCAAGGTAATTCAGTAGACCATATATAATTATAAACAACAGCATATTGGTCACATCTGCCAATTTCCTTGGAGCTGAACCAGAATTAACTAACCATTTACTTTTCTTTTGTAGTCATCTTAGCAGAAGCAGTTGCATTGATTGCTGCAAGCACTGTTCATAGAGTTTGCATCACAACATGGTATTCTGACGCAGTCACATTTTTTACTGTTTTTATAGTTACTTCCGTGGGGAAATGGAATGTGGAAGGAATCACTTTAAATAGTAAAGACCTCATAGAGATTCAAAAGTTATGATTATAAGACAGAACTGATCCTGTCAAACGTGCATCATACGAATTGAAATAGTAATAATTTCATTTTCAAATGCTTTAGGAGGAAAGGGAAGGGAACAAATCCTAGACGTTTGCTTACATTTCAATTTTTGAGATTAATAAAAACCATTGTAATAAAAAGTAGAACAACAAATTCTATGAAAACAATTTGATTGATTGCACCAAAATTTTGAGTATCTTGGAAGTCTAACTTTAAAGCATGATAACTTTCTTCTGCCGCAGTTTCTTGTTCTCCGCTGGACTGCTGTATGAGTTGAACAAGCTTTCAGGTGTGGCACTTTCTAAATCTGAATCTAGAGCCAAAAGGCACTGAGATGGAAACTAAGCTCTTAAGACAGGAACGACGTTGTTTTTGAGATTTTCTTTTTACCCCCTAGCTCCTGCAGCTACACCCTATGGTGCTGAGTAGTTGTGTTTTTGTTTTAGTTTTAGAAGGGGGCCGTGAGAACAGTTTATTACAATTATAATTATCATAATATTAACAATGGCGTTAACTTTACTCTCTTCAAACACTCTTTTTCTTTGGTTACGTAGAAAATGTATGGCATGTTTCCTGATTAGAGGTCCTGTCGGTTAGGGATTAGGGATTGTTAAATAAAGGTCGACTGTTATTTAATCCACAACTCTTTACATTCATCTTTTAAACGTTAC TTAAAAAACGGGGGAAAAAAGTTGTGATACGACACCGTTTTCTTGTTCTAAACTTCTCACGAAGTATTAGAAGCAGATTAGCGAGGACCGGCTTCGACATAGACCGTCGACGCGTCGTCAAAGAAGGAGGAATCGAAAGCCTCTGCGATAGAGCTGCTGCCAGAGAGGCCATGGCGGGGTCTGGGAGTTCCATGCTTTACTCATTTCTTCTGTTCACTGTCATTCTTTCACTTCAAGAGATGTATAGAGGAAAGTTGGCTTCTTCGGAGTTGTTTACCATACTTGGAGGATTCATAAGTTCTCTTCTGTTTCTAGTGCTTCTAACATTCATAGGAAACTTCCAGGAAACATGTGGCATGCGAACTGGATGGGGAGCTGTCATCTTAGCAGAAGCAGTTGCATTGATTGCTGCAAGCACTGTTCATAGAGTTTGCATCACAACATGTTTCTTGTTCTCCGCTGGACTGCTGTATGAGTTGAACAAGCTTTCAGGTGTGGCACTTTCTAAATCTGAATCTAGAGCCAAAAGGCACTGAGATGGAAACTAAGCTCTTAAGACAGGAACGACGTTGTTTTTGAGATTTTCTTTTTACCCCCTAGCTCCTGCAGCTACACCCTATGGTGCTGAGTAGTTGTGTTTTTGTTTTAGTTTTAGAAGGGGGCCGTGAGAACAGTTTATTACAATTATAATTATCATAATATTAACAATGGCGTTAACTTTACTCTCTTCAAACACTCTTTTTCTTTGGTTACGTAGAAAATGTATGGCATGTTTCCTGATTAGAGGTCCTGTCGGTTAGGGATTAGGGATTGTTAAATAAAGGTCGACTGTTATTTAATCCACAACTCTTTACATTCATCTTTTAAACGTTAC ATGGCGGGGTCTGGGAGTTCCATGCTTTACTCATTTCTTCTGTTCACTGTCATTCTTTCACTTCAAGAGATGTATAGAGGAAAGTTGGCTTCTTCGGAGTTGTTTACCATACTTGGAGGATTCATAAGTTCTCTTCTGTTTCTAGTGCTTCTAACATTCATAGGAAACTTCCAGGAAACATGTGGCATGCGAACTGGATGGGGAGCTGTCATCTTAGCAGAAGCAGTTGCATTGATTGCTGCAAGCACTGTTCATAGAGTTTGCATCACAACATGTTTCTTGTTCTCCGCTGGACTGCTGTATGAGTTGAACAAGCTTTCAGGTGTGGCACTTTCTAAATCTGAATCTAGAGCCAAAAGGCACTGA MAGSGSSMLYSFLLFTVILSLQEMYRGKLASSELFTILGGFISSLLFLVLLTFIGNFQETCGMRTGWGAVILAEAVALIAASTVHRVCITTCFLFSAGLLYELNKLSGVALSKSESRAKRH Homology
BLAST of Tan0012778 vs. ExPASy Swiss-Prot
Match: Q5Q995 (Protein KRTCAP2 homolog OS=Ixodes scapularis OX=6945 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.5e-11 Identity = 40/108 (37.04%), Postives = 68/108 (62.96%), Query Frame = 0
BLAST of Tan0012778 vs. ExPASy Swiss-Prot
Match: A6QQ59 (Keratinocyte-associated protein 2 OS=Bos taurus OX=9913 GN=KRTCAP2 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.3e-10 Identity = 44/112 (39.29%), Postives = 66/112 (58.93%), Query Frame = 0
BLAST of Tan0012778 vs. ExPASy Swiss-Prot
Match: P86229 (Keratinocyte-associated protein 2 OS=Canis lupus familiaris OX=9615 GN=KRTCAP2 PE=1 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.3e-10 Identity = 44/110 (40.00%), Postives = 65/110 (59.09%), Query Frame = 0
BLAST of Tan0012778 vs. ExPASy Swiss-Prot
Match: Q8N6L1 (Keratinocyte-associated protein 2 OS=Homo sapiens OX=9606 GN=KRTCAP2 PE=1 SV=2) HSP 1 Score: 67.4 bits (163), Expect = 1.3e-10 Identity = 44/112 (39.29%), Postives = 66/112 (58.93%), Query Frame = 0
BLAST of Tan0012778 vs. ExPASy Swiss-Prot
Match: Q5RL79 (Keratinocyte-associated protein 2 OS=Mus musculus OX=10090 GN=Krtcap2 PE=1 SV=2) HSP 1 Score: 65.9 bits (159), Expect = 3.7e-10 Identity = 43/112 (38.39%), Postives = 66/112 (58.93%), Query Frame = 0
BLAST of Tan0012778 vs. NCBI nr
Match: XP_038884115.1 (protein KRTCAP2 homolog [Benincasa hispida]) HSP 1 Score: 223.4 bits (568), Expect = 1.1e-54 Identity = 118/121 (97.52%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of Tan0012778 vs. NCBI nr
Match: XP_022990979.1 (protein KRTCAP2 homolog [Cucurbita maxima] >XP_022990980.1 protein KRTCAP2 homolog [Cucurbita maxima] >XP_023552950.1 protein KRTCAP2 homolog isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552956.1 protein KRTCAP2 homolog isoform X1 [Cucurbita pepo subsp. pepo] >XP_023552963.1 protein KRTCAP2 homolog isoform X2 [Cucurbita pepo subsp. pepo] >XP_023552970.1 protein KRTCAP2 homolog isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 221.9 bits (564), Expect = 3.1e-54 Identity = 118/121 (97.52%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of Tan0012778 vs. NCBI nr
Match: XP_022953105.1 (protein KRTCAP2 homolog [Cucurbita moschata] >XP_022953114.1 protein KRTCAP2 homolog [Cucurbita moschata]) HSP 1 Score: 219.9 bits (559), Expect = 1.2e-53 Identity = 117/121 (96.69%), Postives = 119/121 (98.35%), Query Frame = 0
BLAST of Tan0012778 vs. NCBI nr
Match: KAG6602123.1 (hypothetical protein SDJN03_07356, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032821.1 hypothetical protein SDJN02_06871 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 219.5 bits (558), Expect = 1.5e-53 Identity = 117/121 (96.69%), Postives = 119/121 (98.35%), Query Frame = 0
BLAST of Tan0012778 vs. NCBI nr
Match: XP_017981260.1 (PREDICTED: keratinocyte-associated protein 2 [Theobroma cacao] >XP_021285029.1 keratinocyte-associated protein 2 [Herrania umbratica]) HSP 1 Score: 218.4 bits (555), Expect = 3.4e-53 Identity = 115/121 (95.04%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of Tan0012778 vs. ExPASy TrEMBL
Match: A0A6J1JTI0 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit KCP2 OS=Cucurbita maxima OX=3661 GN=LOC111487711 PE=3 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 1.5e-54 Identity = 118/121 (97.52%), Postives = 120/121 (99.17%), Query Frame = 0
BLAST of Tan0012778 vs. ExPASy TrEMBL
Match: A0A6J1GNR1 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit KCP2 OS=Cucurbita moschata OX=3662 GN=LOC111455605 PE=3 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 5.7e-54 Identity = 117/121 (96.69%), Postives = 119/121 (98.35%), Query Frame = 0
BLAST of Tan0012778 vs. ExPASy TrEMBL
Match: A0A6J1AEF8 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit KCP2 OS=Herrania umbratica OX=108875 GN=LOC110417126 PE=3 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 1.6e-53 Identity = 115/121 (95.04%), Postives = 118/121 (97.52%), Query Frame = 0
BLAST of Tan0012778 vs. ExPASy TrEMBL
Match: A0A0A0KIU0 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit KCP2 OS=Cucumis sativus OX=3659 GN=Csa_6G381810 PE=3 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 1.6e-53 Identity = 115/121 (95.04%), Postives = 119/121 (98.35%), Query Frame = 0
BLAST of Tan0012778 vs. ExPASy TrEMBL
Match: A0A061FHK5 (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit KCP2 OS=Theobroma cacao OX=3641 GN=TCM_035199 PE=3 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 4.8e-53 Identity = 114/121 (94.21%), Postives = 117/121 (96.69%), Query Frame = 0
BLAST of Tan0012778 vs. TAIR 10
Match: AT1G77350.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function KRTCAP2 (InterPro:IPR018614); Has 141 Blast hits to 141 proteins in 57 species: Archae - 0; Bacteria - 0; Metazoa - 96; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). ) HSP 1 Score: 181.0 bits (458), Expect = 5.6e-46 Identity = 96/122 (78.69%), Postives = 111/122 (90.98%), Query Frame = 0
BLAST of Tan0012778 vs. TAIR 10
Match: AT1G77350.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function KRTCAP2 (InterPro:IPR018614); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 181.0 bits (458), Expect = 5.6e-46 Identity = 96/122 (78.69%), Postives = 111/122 (90.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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