Tan0012757 (gene) Snake gourd v1

Overview
NameTan0012757
Typegene
OrganismTrichosanthes anguina (Snake gourd v1)
Descriptionribonuclease P protein subunit p38
LocationLG11: 15993993 .. 15997868 (+)
RNA-Seq ExpressionTan0012757
SyntenyTan0012757
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCATAAGCCGCGGGTGGGCAGCGCTAGTTCGTCCAGTTCCAGAGCGGTGTTTGTTCAATCGGAGAAGGCCACTGCTATTTCTCTCGACACTTGGAAGCTACAGTTCGTAGCAAGTTTTCGGTCATGGGCAAGAAGGCCAAATCTTCTGGTTATGTTGCAGTCGTTCAATCCAAGCGTAGCGAAGAGTAAGCCTCCTTTTCTTTCTTACTTTCATGCTTTGCGGATCCTTCCCCCTCTTCTCCATTCGATTTCTTACCTTGATGGTTCTTGTTTTAATTTTCAATCGATTATGTATTTCGAATTTGTTTACGCAGTTCCTATGAAGGGGAACGTCTCGATGAATTGCTACAGTCGATTCAGAGGTAAACATTAGTTAATTTCTTTAATAGTGCACTTCAAGCCACCAGTAACTGATAATTGTGTTTAACAGGGAGATAAAGAGAACAAGATCTCTGAATGCGGAATCCTTGCCGGAAAAGATTTGGCTTAAGGTTTCCATTAATTTTTCTGTTTGATTGATGTCTGTTCGTGTTTTCAAAGTCTTTAGTTTCTCCTTACCATGTCATGTCAATAATGTTTCTCGTTATTAGTTAGAGAAACAAAAATTTAACTGATCACTCTGCTTATAAGCTACTTATGTTGAGTGATGGGCTTCTTCTCAGAAACAATTCGCAGTTGGAGTTAATGAGGTTACCAGAGTCCTTGAACGGATGACGCCAAGTGGAGATTCTCCTCACATAATGAACCCTAATTATAAGGCGTGTACAGTCAAGCTTCAGGTTAGTCTACTCCTGTATTTATATTGGGCAATGCTATCTAGGGTTTAAGGAATTAGCAGTAGGAGTAAAACTATACTGCCGAATGCTTATTATAAATAGTTTCCGAGCTTTACCCTTCTACGGTGGTGTTGTTGCACTTCACCTTATTATTTCTGGTGGATTGATGGACCCTTTCGTTAACTCGAAGTCATAAGTATTACTTTCTTGGTTTTGTTTCAGTTTTGTGTTAATCTTTTTTCTTTTACCTAGTTTTGTGTCAATCTCACGCGTGCGAAATTAATGTATTTGTAATATCGTAATTGTGGGCTCGTCTTGTTTTTTATGAAGTCACTGAATTGCTGATTGTTGAACTCGGCTAGTTTTCCATGATAAGATATATATATTTATACACACTGCCTTTCATGGGAAGAGGCAACCAATTAAAAGTTAAAATGCGAGCCACATTGGTACTTCCATGAGATCTAGTTGTGATAGATGACCTTGATACTTCAAATATTAGGTTAAAGAGCAGGTTGAGGTAATCCCTTTTGCACTAAAGGCCCTGTTCAGGCCTGCGCAATGATAATCGCACAACAGAAGATCTCAAATGATATGTCGTAGACCTGCGCTTCTTAGGAGGAATCGAGCCTTAAAGGTAAAAGGTTTTTGAAGTTAAAGAGAGCAATTTGGTTCAACCAATAAGCGAAGATGAAGTCCATGGATGAACCCTCCCATAAGTCTTTTTGTTTTAGGTAATGGTGTAAATAGTTCAGGCCTGCCACTTGAGATACAAGACATCTCATAGAGTTTGTAACCTGTATTGTAGGTTGTGGCCTAAGGAAATGTACTTATCCTGTCTAAAGTGTCCAATTGATCGATTTATGAGTGTACTTGAAGCAAACAATAGTTTCTTTTGAGAGAAAAACTGCCGCTGTGGAAAACTCTTGTTGATTCTCATGTTGAAGGAAACTATCCTAAAACTTCCTTAAGCCCTGATCATCTTCATATAATTTTTCTATGGTGTCAAAGGATATCAACAAAGCCCTTAGTCTAGTTTGCACAGTTTGGGAGTTTGCTACATGATTGGTATAGCCCAAGATATGTGCTTAACCACAATAGAAAACTTCTACAACAATGACTCGCTGTTCATCTATCCCACAGAGTGTTGTTTGTGAAATAATCCATCTCAATGCTTGGTACAAGTATGTATAAAGCAAATTTAATGGCCATTAAGGGGTGTTTCTTATGCAGCAAGAATTGGGATGAGGCTTAGAAGTCCTATTGATAACTAGATTATTTCCTCCCTGGTAGGCTTAGTTTCTCACTAAAATATTCCTAAGGCTAAACTTTTTGAGATAGGACTGCTCCTATCCCTTCAGCAGAAGCATCCATCTGGACTTCAAAGAGGATGCCAAATGTTGGCAAGGCCAAGATGGCTGCAAATATTTACTTTCTTTGAGTGTTTAGAGGCTATTTTTATAATCCCACCTAGATGCTTTGAAGTTTGAACATGTATGGGAAAAATATATTAATTCCATTAACTTTAAGCATCTATTGTGATGTTTGGCTTGGGCGAAGATCCTATGCATAGTTTGGATCTGTCCACTCATATAATGTTGATTCTCTCTATGGATCATCATTCTTGTAACTCACCTTTTGGTGTTTGGAGTTATCTCCATTTCATTTATCAATGAAATAGTTTCTTATATAAAAAAAAAGATTCTCTCTATGGATCCTAAGAATAACCCTTTTTATCATGAGAAACATGCACTTAGGGATATTAAAACAAAGCTTGGTAGATTTTGGAGCGGTAAAAAATTCCTGGAGATACGAAAAATGTGTGATATTGGCTGTGACTTAGTTTGTCATCTAAGTAGACAATAAGGAACTTACCAATGATTCAGTGAATGGTCATAATACATGTATCATCAGGCACATAAAAGTACTTGGAGCATTGATCGAGCCAAAAAGCACATCCCCAACTTGCCTGCCTTGTAAGGACCTCATCGAGTCTTGAAGGCTATTTCTCTCATCTCTTGGTGTGATTCGAATTTGGTGGTGGCTACCTTTTAGGTCTAGTTTAGCAAAGGTGATTGTTGTGCACCACTTAATTGATCTAGGAGATTTGATAGTGGTTTTGCTCAGGGAGTCAATATTTAGCTCTATTTTCGATATGGATTCTATGTACCATTCTAGTTCAGTAGTGAGTGTTCATCGTGAATTCCCTAGGACAGTGGCTTCCTTCAGTCATCTTTTTTATGCTTAATATATAACTCTCAAATGTTAATTAAACCAATCCATCATGCATTGCCTACTGTCTTTCTGTATACGATGTCTATTTACTTTGCATTTCATCTTTTATATATGTAGGCTATACTGTTAACAGCTGATTGCAACCCTCGATGGTTGACAAACCATGTGCCAAACTTGGCCATCTCTAGGAAGGTACCATTGATCCTCGTGAAAGATAAAGAGGGATCTTTAAGGTTAGGTGAACTCGTTAACCTTAAAACAGCAATTGCAATTGGAATAAAGGTGAGGAGGGAATGATAATCAATTGCCTTGGTCTACGTTTCTTTTCTGTTTTGTTCTGTTCAATCTTTTTAAAAAACCTGTTGTTAACAAAGTTGCACTGTTTCCAAACGAATTGCAGGCGAATGGGAGCCCTGTTAATCAACTTATTGGTGAAATTCTTCAACGAACAGCATCAAAAAATGTTTTGTAGGTACAACAAAGTTGTCTGCTGTACAGTATATATATGATATGAACTAAAAAAAAATTCTTGTCCTCTTCCCTTTAGCAGTTTGAGATTTTCTCTAGTTTTGCTAATCACATGAAATAGATTTGTGCTGATTCATTCTAGATAATGACCACCACTGTGGTTGGAAAGATAGTTTATTAGATTTCTAGTTGGAAATAGTGTATGAAAATATGGTGTATCCTTATTAAGAATATTTGCAGAAGCGTGAGAAGCTAGAATAGTTATTCTTATGTAATTCATTGATTATTTGATTGGGAAATTTCTGACCCAATTTTGTGTGCGGTAGATTAAGTCAACTGTTATCGTGGCTGATGATGTTTATAAATCCATAATAACATGTCTCGATCATGATTAAC

mRNA sequence

GCCATAAGCCGCGGGTGGGCAGCGCTAGTTCGTCCAGTTCCAGAGCGGTGTTTGTTCAATCGGAGAAGGCCACTGCTATTTCTCTCGACACTTGGAAGCTACAGTTCGTAGCAAGTTTTCGGTCATGGGCAAGAAGGCCAAATCTTCTGGTTATGTTGCAGTCGTTCAATCCAAGCGTAGCGAAGATTCCTATGAAGGGGAACGTCTCGATGAATTGCTACAGTCGATTCAGAGGGAGATAAAGAGAACAAGATCTCTGAATGCGGAATCCTTGCCGGAAAAGATTTGGCTTAAGAAACAATTCGCAGTTGGAGTTAATGAGGTTACCAGAGTCCTTGAACGGATGACGCCAAGTGGAGATTCTCCTCACATAATGAACCCTAATTATAAGGCGTGTACAGTCAAGCTTCAGGCTATACTGTTAACAGCTGATTGCAACCCTCGATGGTTGACAAACCATGTGCCAAACTTGGCCATCTCTAGGAAGGTACCATTGATCCTCGTGAAAGATAAAGAGGGATCTTTAAGGTTAGGTGAACTCGTTAACCTTAAAACAGCAATTGCAATTGGAATAAAGGCGAATGGGAGCCCTGTTAATCAACTTATTGGTGAAATTCTTCAACGAACAGCATCAAAAAATGTTTTGTAGGTACAACAAAGTTGTCTGCTGTACAGTATATATATGATATGAACTAAAAAAAAATTCTTGTCCTCTTCCCTTTAGCAGTTTGAGATTTTCTCTAGTTTTGCTAATCACATGAAATAGATTTGTGCTGATTCATTCTAGATAATGACCACCACTGTGGTTGGAAAGATAGTTTATTAGATTTCTAGTTGGAAATAGTGTATGAAAATATGGTGTATCCTTATTAAGAATATTTGCAGAAGCGTGAGAAGCTAGAATAGTTATTCTTATGTAATTCATTGATTATTTGATTGGGAAATTTCTGACCCAATTTTGTGTGCGGTAGATTAAGTCAACTGTTATCGTGGCTGATGATGTTTATAAATCCATAATAACATGTCTCGATCATGATTAAC

Coding sequence (CDS)

ATGGGCAAGAAGGCCAAATCTTCTGGTTATGTTGCAGTCGTTCAATCCAAGCGTAGCGAAGATTCCTATGAAGGGGAACGTCTCGATGAATTGCTACAGTCGATTCAGAGGGAGATAAAGAGAACAAGATCTCTGAATGCGGAATCCTTGCCGGAAAAGATTTGGCTTAAGAAACAATTCGCAGTTGGAGTTAATGAGGTTACCAGAGTCCTTGAACGGATGACGCCAAGTGGAGATTCTCCTCACATAATGAACCCTAATTATAAGGCGTGTACAGTCAAGCTTCAGGCTATACTGTTAACAGCTGATTGCAACCCTCGATGGTTGACAAACCATGTGCCAAACTTGGCCATCTCTAGGAAGGTACCATTGATCCTCGTGAAAGATAAAGAGGGATCTTTAAGGTTAGGTGAACTCGTTAACCTTAAAACAGCAATTGCAATTGGAATAAAGGCGAATGGGAGCCCTGTTAATCAACTTATTGGTGAAATTCTTCAACGAACAGCATCAAAAAATGTTTTGTAG

Protein sequence

MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRTASKNVL
Homology
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BLAST of Tan0012757 vs. ExPASy Swiss-Prot
Match: Q32LC1 (Ribonuclease P protein subunit p38 OS=Bos taurus OX=9913 GN=RPP38 PE=2 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 1.0e-05
Identity = 37/118 (31.36%), Postives = 54/118 (45.76%), Query Frame = 0 

Query: 56  LKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPN 115
           ++KQ A+G+NEVTR LER                    +L   L      P  +T+H+  
Sbjct: 109 VRKQLAIGINEVTRALERN-------------------ELLLALACKSAKPAIVTSHLVQ 168

Query: 116 LAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRTASKNV 174
           L++SR VP   V     S RL  ++ LK  +A+G K N +   + +  IL R    NV
Sbjct: 169 LSVSRGVPACQV--PRLSERLAPVLGLKCVLALGFKRNTTAFGEELRAILPRVPRLNV 205

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BLAST of Tan0012757 vs. ExPASy Swiss-Prot
Match: P78345 (Ribonuclease P protein subunit p38 OS=Homo sapiens OX=9606 GN=RPP38 PE=1 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 1.8e-05
Identity = 35/118 (29.66%), Postives = 55/118 (46.61%), Query Frame = 0 

Query: 56  LKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPN 115
           ++KQ A+GVNEVTR LER                    +L  +L+     P  +T+H+  
Sbjct: 109 VRKQLAIGVNEVTRALERR-------------------ELLLVLVCKSVKPAMITSHLIQ 168

Query: 116 LAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRTASKNV 174
           L++SR VP   V     S R+  ++ LK  +A+  K N +     +  I+ R  S +V
Sbjct: 169 LSLSRSVPACQV--PRLSERIAPVIGLKCVLALAFKKNTTDFVDEVRAIIPRVPSLSV 205

[Close]
BLAST of Tan0012757 vs. ExPASy Swiss-Prot
Match: Q80UU2 (Ribonuclease P protein subunit p38 OS=Mus musculus OX=10090 GN=Rpp38 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.8e-05
Identity = 35/120 (29.17%), Postives = 56/120 (46.67%), Query Frame = 0 

Query: 54  IWLKKQFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHV 113
           + ++KQ  +GVNEVTR LER                    +L  +L+     P  +T+H+
Sbjct: 102 VHVRKQLVIGVNEVTRALERN-------------------ELLLVLVCKSVKPAIITSHL 161

Query: 114 PNLAISRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRTASKNV 173
             L++SR VP   V   + S R+  ++ LK  +A+G + N       +  I+ R  S NV
Sbjct: 162 IQLSLSRTVPACQV--PQLSERIAPVIGLKCVLALGSRKNTRDFADEVEAIIPRVPSLNV 200

[Close]
BLAST of Tan0012757 vs. NCBI nr
Match: XP_022938626.1 (ribonuclease P protein subunit p38 [Cucurbita moschata])

HSP 1 Score: 308.9 bits (790), Expect = 2.7e-80
Identity = 158/168 (94.05%), Postives = 163/168 (97.02%), Query Frame = 0 

Query: 1   MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQF 60
           MGKKAKSSG VAVVQSKR+EDSYEGERLDELLQSIQREIKR R LNAESLPEKIWLKKQF
Sbjct: 1   MGKKAKSSGPVAVVQSKRNEDSYEGERLDELLQSIQREIKRARCLNAESLPEKIWLKKQF 60

Query: 61  AVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPNLAISR 120
           A+GVNEVTRVLERMTPSGDS  I+NPNYKACTV+LQAILLTADCNPRWLTNHVP+LAISR
Sbjct: 61  AIGVNEVTRVLERMTPSGDSARIVNPNYKACTVRLQAILLTADCNPRWLTNHVPSLAISR 120

Query: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT 169
           KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT
Sbjct: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT 168

[Close]
BLAST of Tan0012757 vs. NCBI nr
Match: KAG6579150.1 (hypothetical protein SDJN03_23598, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016668.1 hypothetical protein SDJN02_21778 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 305.8 bits (782), Expect = 2.3e-79
Identity = 157/168 (93.45%), Postives = 162/168 (96.43%), Query Frame = 0 

Query: 1   MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQF 60
           MGKKAKSSG VAVVQSKR+EDSYEGERLDELLQSIQREIKR R LNAESLPEKIWLKKQF
Sbjct: 1   MGKKAKSSGPVAVVQSKRNEDSYEGERLDELLQSIQREIKRARCLNAESLPEKIWLKKQF 60

Query: 61  AVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPNLAISR 120
           A+GVNEVTRVLERMTPS DS  I+NPNYKACTV+LQAILLTADCNPRWLTNHVP+LAISR
Sbjct: 61  AIGVNEVTRVLERMTPSEDSARIVNPNYKACTVRLQAILLTADCNPRWLTNHVPSLAISR 120

Query: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT 169
           KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT
Sbjct: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT 168

[Close]
BLAST of Tan0012757 vs. NCBI nr
Match: XP_023549838.1 (ribonuclease P protein subunit p38 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 304.3 bits (778), Expect = 6.8e-79
Identity = 155/168 (92.26%), Postives = 162/168 (96.43%), Query Frame = 0 

Query: 1   MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQF 60
           MGKKAKSSG VAVVQSKR+EDSYEGERLDELLQSIQREIKR R LNAE+LPEKIWLKKQF
Sbjct: 1   MGKKAKSSGPVAVVQSKRNEDSYEGERLDELLQSIQREIKRARCLNAETLPEKIWLKKQF 60

Query: 61  AVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPNLAISR 120
           A+GVNEVTRVLERMTPS DS  I+NPNYKACTV+LQAILLTADCNPRWLTNHVP+LAISR
Sbjct: 61  AIGVNEVTRVLERMTPSEDSARIVNPNYKACTVRLQAILLTADCNPRWLTNHVPSLAISR 120

Query: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT 169
           KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSP+NQLIGEILQRT
Sbjct: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPINQLIGEILQRT 168

[Close]
BLAST of Tan0012757 vs. NCBI nr
Match: XP_022993803.1 (ribonuclease P protein subunit p38 [Cucurbita maxima])

HSP 1 Score: 295.4 bits (755), Expect = 3.1e-76
Identity = 154/168 (91.67%), Postives = 159/168 (94.64%), Query Frame = 0 

Query: 1   MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQF 60
           MGKKAKSSG VAVVQSKR+EDSYEGERLDELLQSIQREIKR R LNA+SLPEKIWLKKQF
Sbjct: 1   MGKKAKSSGPVAVVQSKRNEDSYEGERLDELLQSIQREIKRARFLNADSLPEKIWLKKQF 60

Query: 61  AVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPNLAISR 120
           A+GVNEVTRVLERMTPS DS   MNPNYKACTV+LQAILLTADCNPRWLTNHVP+LAISR
Sbjct: 61  AIGVNEVTRVLERMTPSEDSAR-MNPNYKACTVRLQAILLTADCNPRWLTNHVPSLAISR 120

Query: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT 169
           KVPLILVKDKEGSLRLGELVNLKTAIAIGIK NGSPVNQLIGEIL RT
Sbjct: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKDNGSPVNQLIGEILSRT 167

[Close]
BLAST of Tan0012757 vs. NCBI nr
Match: XP_038875290.1 (ribonuclease P protein subunit p38 [Benincasa hispida])

HSP 1 Score: 290.4 bits (742), Expect = 1.0e-74
Identity = 149/167 (89.22%), Postives = 156/167 (93.41%), Query Frame = 0 

Query: 1   MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQF 60
           MGKKAKSS   AV+QSK +EDSYEGERLDE LQSIQREIK  R LNAESLPEKIWLKKQF
Sbjct: 1   MGKKAKSSAPDAVLQSKPNEDSYEGERLDEFLQSIQREIKTARFLNAESLPEKIWLKKQF 60

Query: 61  AVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPNLAISR 120
           A+GVNEVTRVLERMTPSGDS  IMNPNYKACTVKLQA+LLTA+CNPRWLTNHVP+LA+SR
Sbjct: 61  AIGVNEVTRVLERMTPSGDSARIMNPNYKACTVKLQAVLLTANCNPRWLTNHVPSLAMSR 120

Query: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQR 168
           KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLI EILQR
Sbjct: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIDEILQR 167

[Close]
BLAST of Tan0012757 vs. ExPASy TrEMBL
Match: A0A6J1FDN9 (ribonuclease P protein subunit p38 OS=Cucurbita moschata OX=3662 GN=LOC111444805 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 158/168 (94.05%), Postives = 163/168 (97.02%), Query Frame = 0 

Query: 1   MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQF 60
           MGKKAKSSG VAVVQSKR+EDSYEGERLDELLQSIQREIKR R LNAESLPEKIWLKKQF
Sbjct: 1   MGKKAKSSGPVAVVQSKRNEDSYEGERLDELLQSIQREIKRARCLNAESLPEKIWLKKQF 60

Query: 61  AVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPNLAISR 120
           A+GVNEVTRVLERMTPSGDS  I+NPNYKACTV+LQAILLTADCNPRWLTNHVP+LAISR
Sbjct: 61  AIGVNEVTRVLERMTPSGDSARIVNPNYKACTVRLQAILLTADCNPRWLTNHVPSLAISR 120

Query: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT 169
           KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT
Sbjct: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT 168

[Close]
BLAST of Tan0012757 vs. ExPASy TrEMBL
Match: A0A6J1K3C5 (ribonuclease P protein subunit p38 OS=Cucurbita maxima OX=3661 GN=LOC111489702 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.5e-76
Identity = 154/168 (91.67%), Postives = 159/168 (94.64%), Query Frame = 0 

Query: 1   MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQF 60
           MGKKAKSSG VAVVQSKR+EDSYEGERLDELLQSIQREIKR R LNA+SLPEKIWLKKQF
Sbjct: 1   MGKKAKSSGPVAVVQSKRNEDSYEGERLDELLQSIQREIKRARFLNADSLPEKIWLKKQF 60

Query: 61  AVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPNLAISR 120
           A+GVNEVTRVLERMTPS DS   MNPNYKACTV+LQAILLTADCNPRWLTNHVP+LAISR
Sbjct: 61  AIGVNEVTRVLERMTPSEDSAR-MNPNYKACTVRLQAILLTADCNPRWLTNHVPSLAISR 120

Query: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT 169
           KVPLILVKDKEGSLRLGELVNLKTAIAIGIK NGSPVNQLIGEIL RT
Sbjct: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKDNGSPVNQLIGEILSRT 167

[Close]
BLAST of Tan0012757 vs. ExPASy TrEMBL
Match: A0A6J1CZ90 (ribonuclease P protein subunit p38 OS=Momordica charantia OX=3673 GN=LOC111015626 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.1e-71
Identity = 143/173 (82.66%), Postives = 152/173 (87.86%), Query Frame = 0 

Query: 1   MGKKAKSSGYVAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQF 60
           MGKKAKSS    VV+SK  +D YEG+RLDELLQSIQREIKR R LNAESLP KIWLKKQF
Sbjct: 1   MGKKAKSSANAQVVRSKLHQDCYEGQRLDELLQSIQREIKRARLLNAESLPAKIWLKKQF 60

Query: 61  AVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPNLAISR 120
           AVGVNEVTRVLERMTPSGDS  IMNPNYKACTV+LQAILL  DCNPRWLTNH+P LA+SR
Sbjct: 61  AVGVNEVTRVLERMTPSGDSARIMNPNYKACTVRLQAILLAGDCNPRWLTNHLPTLALSR 120

Query: 121 KVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRTASKNV 174
            VPL+L+KDKEGSLRLGELVNLKTAIAIGIKANGS +NQLIGEILQ T S  V
Sbjct: 121 NVPLLLMKDKEGSLRLGELVNLKTAIAIGIKANGSLINQLIGEILQGTVSLKV 173

[Close]
BLAST of Tan0012757 vs. ExPASy TrEMBL
Match: A0A1S3CR39 (ribonuclease P protein subunit p38 isoform X6 OS=Cucumis melo OX=3656 GN=LOC103503720 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.1e-70
Identity = 143/169 (84.62%), Postives = 150/169 (88.76%), Query Frame = 0 

Query: 1   MGKKAKSSGY-VAVVQSKRSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQ 60
           MGK  KSS + VA +QSK  EDSYEGERLDELL SIQREIK  R LNAESLPEK WLKKQ
Sbjct: 1   MGKNPKSSAHPVATLQSKPYEDSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKKQ 60

Query: 61  FAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPNLAIS 120
           FA+GVNEVTR LERMTP GDS  +MNPNYKAC VKLQAILLTA+CNPRWLTNHVP LA+S
Sbjct: 61  FAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAMS 120

Query: 121 RKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT 169
           RKVPLILVKDKEGSLRLGELVNLKTAIAIGIK+NGSPVNQLI EILQRT
Sbjct: 121 RKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRT 169

[Close]
BLAST of Tan0012757 vs. ExPASy TrEMBL
Match: A0A1S3CQV2 (ribonuclease P protein subunit p38 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103503720 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 5.2e-69
Identity = 143/170 (84.12%), Postives = 150/170 (88.24%), Query Frame = 0 

Query: 1   MGKKAKSSGY-VAVVQSKRSED-SYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKK 60
           MGK  KSS + VA +QSK  ED SYEGERLDELL SIQREIK  R LNAESLPEK WLKK
Sbjct: 1   MGKNPKSSAHPVATLQSKPYEDSSYEGERLDELLLSIQREIKTARGLNAESLPEKFWLKK 60

Query: 61  QFAVGVNEVTRVLERMTPSGDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPNLAI 120
           QFA+GVNEVTR LERMTP GDS  +MNPNYKAC VKLQAILLTA+CNPRWLTNHVP LA+
Sbjct: 61  QFAIGVNEVTRALERMTPCGDSARLMNPNYKACKVKLQAILLTANCNPRWLTNHVPCLAM 120

Query: 121 SRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKANGSPVNQLIGEILQRT 169
           SRKVPLILVKDKEGSLRLGELVNLKTAIAIGIK+NGSPVNQLI EILQRT
Sbjct: 121 SRKVPLILVKDKEGSLRLGELVNLKTAIAIGIKSNGSPVNQLIDEILQRT 170

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BLAST of Tan0012757 vs. TAIR 10
Match: AT4G01790.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 165.2 bits (417), Expect = 4.6e-41
Identity = 87/151 (57.62%), Postives = 106/151 (70.20%), Query Frame = 0 

Query: 18  RSEDSYEGERLDELLQSIQREIKRTRSLNAESLPEKIWLKKQFAVGVNEVTRVLERMTPS 77
           +  D YEGERL  LL  IQR I+ ++  N  SLPEKIWLKKQ A+G+NEVTRVLERM P+
Sbjct: 21  KESDYYEGERLTHLLDLIQRGIETSKLSNVNSLPEKIWLKKQIAIGINEVTRVLERMNPN 80

Query: 78  GDSPHIMNPNYKACTVKLQAILLTADCNPRWLTNHVPNLAISRKVPLILVKD-KEGSLRL 137
             S    NP       +LQ ++L ADC PR LT H+PNLA SR VP++ V+D K  SLRL
Sbjct: 81  NTSDQQQNPK------QLQVVILVADCKPRMLTKHIPNLAASRNVPVLYVRDNKRASLRL 140

Query: 138 GELVNLKTAIAIGIKANGSPVNQLIGEILQR 168
           GELV LKTA+AIGIKA G+ +N L+ +IL R
Sbjct: 141 GELVKLKTALAIGIKARGNDLNLLLKQILPR 165

The following BLAST results are available for this feature:
BLAST of Tan0012757 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q32LC11.0e-0531.36Ribonuclease P protein subunit p38 OS=Bos taurus OX=9913 GN=RPP38 PE=2 SV=2[more]
P783451.8e-0529.66Ribonuclease P protein subunit p38 OS=Homo sapiens OX=9606 GN=RPP38 PE=1 SV=2[more]
Q80UU21.8e-0529.17Ribonuclease P protein subunit p38 OS=Mus musculus OX=10090 GN=Rpp38 PE=1 SV=1[more]
BLAST of Tan0012757 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022938626.12.7e-8094.05ribonuclease P protein subunit p38 [Cucurbita moschata][more]
KAG6579150.12.3e-7993.45hypothetical protein SDJN03_23598, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023549838.16.8e-7992.26ribonuclease P protein subunit p38 [Cucurbita pepo subsp. pepo][more]
XP_022993803.13.1e-7691.67ribonuclease P protein subunit p38 [Cucurbita maxima][more]
XP_038875290.11.0e-7489.22ribonuclease P protein subunit p38 [Benincasa hispida][more]
BLAST of Tan0012757 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FDN91.3e-8094.05ribonuclease P protein subunit p38 OS=Cucurbita moschata OX=3662 GN=LOC111444805... [more]
A0A6J1K3C51.5e-7691.67ribonuclease P protein subunit p38 OS=Cucurbita maxima OX=3661 GN=LOC111489702 P... [more]
A0A6J1CZ901.1e-7182.66ribonuclease P protein subunit p38 OS=Momordica charantia OX=3673 GN=LOC11101562... [more]
A0A1S3CR392.1e-7084.62ribonuclease P protein subunit p38 isoform X6 OS=Cucumis melo OX=3656 GN=LOC1035... [more]
A0A1S3CQV25.2e-6984.12ribonuclease P protein subunit p38 isoform X5 OS=Cucumis melo OX=3656 GN=LOC1035... [more]
BLAST of Tan0012757 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G01790.14.6e-4157.62Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 28..48
NoneNo IPR availablePANTHERPTHR47903OS07G0636400 PROTEINcoord: 13..169
IPR02906450S ribosomal protein L30e-likeGENE3D3.30.1330.30coord: 3..172
e-value: 6.0E-21
score: 76.7
IPR02906450S ribosomal protein L30e-likeSUPERFAMILY55315L30e-likecoord: 29..166
IPR004038Ribosomal protein L7Ae/L30e/S12e/Gadd45PFAMPF01248Ribosomal_L7Aecoord: 94..155
e-value: 1.7E-5
score: 24.5

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Tan0012757.1Tan0012757.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0043232 intracellular non-membrane-bounded organelle