Tan0012733 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCATCTTTTAAATTTCATCGTGACGAGACAGACACGAAGCTTGCAGCGGGGAATAGGGACTTATGTCGGGAAGGGCTAGGGCTGTGTGGAAGCGACTGCGACAAGAGGTGCAAAGCAAGGCACAACCCAGCAGACAACCCGCAGGGCAGCTGCGACCGCGTCGGGAATGCGATGCTGTGTGAATGCCTTTACGATTGCGGCGGATCTCGGCCGAGGCCGCCGCGTGCAAAGGTGTGCCATGATGGGCTAGGGCTGTGCAGCGCCCGGTGCAACGGCGATTGCTGTAATGCTAAATGTGCAAGCCTGCACAATGGAGGCCAGGGCTACTGCGACACCAACGTTGGAGTTTCTTTGTGCCAATGCAGCTATCCTTGCTAA ATGTCATCTTTTAAATTTCATCGTGACGAGACAGACACGAAGCTTGCAGCGGGGAATAGGGACTTATGTCGGGAAGGGCTAGGGCTGTGTGGAAGCGACTGCGACAAGAGGTGCAAAGCAAGGCACAACCCAGCAGACAACCCGCAGGGCAGCTGCGACCGCGTCGGGAATGCGATGCTGTGTGAATGCCTTTACGATTGCGGCGGATCTCGGCCGAGGCCGCCGCGTGCAAAGGTGTGCCATGATGGGCTAGGGCTGTGCAGCGCCCGGTGCAACGGCGATTGCTGTAATGCTAAATGTGCAAGCCTGCACAATGGAGGCCAGGGCTACTGCGACACCAACGTTGGAGTTTCTTTGTGCCAATGCAGCTATCCTTGCTAA ATGTCATCTTTTAAATTTCATCGTGACGAGACAGACACGAAGCTTGCAGCGGGGAATAGGGACTTATGTCGGGAAGGGCTAGGGCTGTGTGGAAGCGACTGCGACAAGAGGTGCAAAGCAAGGCACAACCCAGCAGACAACCCGCAGGGCAGCTGCGACCGCGTCGGGAATGCGATGCTGTGTGAATGCCTTTACGATTGCGGCGGATCTCGGCCGAGGCCGCCGCGTGCAAAGGTGTGCCATGATGGGCTAGGGCTGTGCAGCGCCCGGTGCAACGGCGATTGCTGTAATGCTAAATGTGCAAGCCTGCACAATGGAGGCCAGGGCTACTGCGACACCAACGTTGGAGTTTCTTTGTGCCAATGCAGCTATCCTTGCTAA MSSFKFHRDETDTKLAAGNRDLCREGLGLCGSDCDKRCKARHNPADNPQGSCDRVGNAMLCECLYDCGGSRPRPPRAKVCHDGLGLCSARCNGDCCNAKCASLHNGGQGYCDTNVGVSLCQCSYPC Homology
BLAST of Tan0012733 vs. ExPASy Swiss-Prot
Match: P82773 (Defensin-like protein 182 OS=Arabidopsis thaliana OX=3702 GN=PDF3.2 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 8.0e-24 Identity = 49/106 (46.23%), Postives = 63/106 (59.43%), Query Frame = 0
BLAST of Tan0012733 vs. ExPASy Swiss-Prot
Match: P82733 (Defensin-like protein 183 OS=Arabidopsis thaliana OX=3702 GN=LCR19 PE=2 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 3.0e-23 Identity = 52/108 (48.15%), Postives = 63/108 (58.33%), Query Frame = 0
BLAST of Tan0012733 vs. ExPASy Swiss-Prot
Match: P82772 (Putative defensin-like protein 180 OS=Arabidopsis thaliana OX=3702 GN=LCR58 PE=3 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.3e-21 Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 0
BLAST of Tan0012733 vs. ExPASy Swiss-Prot
Match: P82789 (Defensin-like protein 181 OS=Arabidopsis thaliana OX=3702 GN=PDF3.1 PE=2 SV=2) HSP 1 Score: 102.1 bits (253), Expect = 4.8e-21 Identity = 47/105 (44.76%), Postives = 61/105 (58.10%), Query Frame = 0
BLAST of Tan0012733 vs. NCBI nr
Match: KAG7020813.1 (Defensin-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 186.4 bits (472), Expect = 1.5e-43 Identity = 82/115 (71.30%), Postives = 90/115 (78.26%), Query Frame = 0
BLAST of Tan0012733 vs. NCBI nr
Match: KAG6586037.1 (putative defensin-like protein 180, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 184.9 bits (468), Expect = 4.3e-43 Identity = 80/106 (75.47%), Postives = 87/106 (82.08%), Query Frame = 0
BLAST of Tan0012733 vs. NCBI nr
Match: XP_004148336.2 (defensin-like protein 182 [Cucumis sativus] >XP_031736571.1 defensin-like protein 182 [Cucumis sativus]) HSP 1 Score: 164.1 bits (414), Expect = 7.9e-37 Identity = 68/110 (61.82%), Postives = 86/110 (78.18%), Query Frame = 0
BLAST of Tan0012733 vs. NCBI nr
Match: KAE8651676.1 (hypothetical protein Csa_021158 [Cucumis sativus]) HSP 1 Score: 164.1 bits (414), Expect = 7.9e-37 Identity = 68/110 (61.82%), Postives = 86/110 (78.18%), Query Frame = 0
BLAST of Tan0012733 vs. NCBI nr
Match: KAA0031758.1 (defensin-like protein 182 [Cucumis melo var. makuwa]) HSP 1 Score: 161.4 bits (407), Expect = 5.1e-36 Identity = 67/110 (60.91%), Postives = 84/110 (76.36%), Query Frame = 0
BLAST of Tan0012733 vs. ExPASy TrEMBL
Match: A0A0A0LMG4 (Defensin-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G060470 PE=3 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 3.8e-37 Identity = 68/110 (61.82%), Postives = 86/110 (78.18%), Query Frame = 0
BLAST of Tan0012733 vs. ExPASy TrEMBL
Match: A0A5A7SMA4 (Defensin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold506G00230 PE=3 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 2.5e-36 Identity = 67/110 (60.91%), Postives = 84/110 (76.36%), Query Frame = 0
BLAST of Tan0012733 vs. ExPASy TrEMBL
Match: A0A5D3CNI5 (Defensin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18312G00010 PE=3 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 8.0e-35 Identity = 65/110 (59.09%), Postives = 83/110 (75.45%), Query Frame = 0
BLAST of Tan0012733 vs. ExPASy TrEMBL
Match: D7MC90 (Defensin-like protein OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_491747 PE=3 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 6.4e-24 Identity = 54/106 (50.94%), Postives = 67/106 (63.21%), Query Frame = 0
BLAST of Tan0012733 vs. ExPASy TrEMBL
Match: A0A059CR65 (Defensin-like protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_C02231 PE=3 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.6e-22 Identity = 53/106 (50.00%), Postives = 67/106 (63.21%), Query Frame = 0
BLAST of Tan0012733 vs. TAIR 10
Match: AT4G30070.1 (low-molecular-weight cysteine-rich 59 ) HSP 1 Score: 111.3 bits (277), Expect = 5.7e-25 Identity = 49/106 (46.23%), Postives = 63/106 (59.43%), Query Frame = 0
BLAST of Tan0012733 vs. TAIR 10
Match: AT4G30074.1 (low-molecular-weight cysteine-rich 19 ) HSP 1 Score: 109.4 bits (272), Expect = 2.2e-24 Identity = 52/108 (48.15%), Postives = 63/108 (58.33%), Query Frame = 0
BLAST of Tan0012733 vs. TAIR 10
Match: AT5G38317.1 (low-molecular-weight cysteine-rich 58 ) HSP 1 Score: 104.0 bits (258), Expect = 9.1e-23 Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 0
BLAST of Tan0012733 vs. TAIR 10
Match: AT5G38330.1 (low-molecular-weight cysteine-rich 80 ) HSP 1 Score: 102.1 bits (253), Expect = 3.4e-22 Identity = 47/105 (44.76%), Postives = 61/105 (58.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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