Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGCCTAAGGAGAAAGTCTTTGCAACCGAAGTTCGCCGAGGAGCCGAGTGACGTGCCAGCGCGACTAATTGAGTGCCAGCACGTAGCAGTGCTGTCAGTAAGAAGGGAGCCTTATCCTTTCGAACGAAGCACTTTCGAGTGTGCGCTTGAGTTTGATTGCAGCTAGCGCGCTTTACTAAAAAGACTCGGCATTCAGGCGAGCCACCCGGTGGTGTGGTACGAAGTGGGTTTAGTACGCCCTGCCAAAACGGCTCCGAAACAAACAAAAAAAAAGGTGCGTGCCGCACTCACGAGGGACTGCCAGTGATATACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATGGGCTGGGCCACACACGTGCTACAATGGCAATTACAATGGGAAGCAAGGCTGTAAGGCGGAGCGAATCCGGAAAGATTGCCTCAGTTCGGATTGTTCTCTGCAACTCGGGAACATGAAGTTGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATATGTACCCGGGCCCTGTACACACCGCCCGTCACACCCTGGGAATGGGTTTCGCCCGAAGCATCGGACCAATGATCACCCATGACTTCCGTGTACCACTAGTGCCACAAAGGCTTTTGGTGGTCTTATTGGCGCATACCACGGTGGGGTCTTCGACTGGGGTGAAGTCGTAA
mRNA sequence
ATGCGCCTAAGGAGAAAGTCTTTGCAACCGAAGTTCGCCGAGGAGCCGAGTGACGTGCCAGCGCGACTAATTGAGTGCCAGCACGTAGCAGTGCTGTCATACGCCCTGCCAAAACGGCTCCGAAACAAACAAAAAAAAAGGTGCGTGCCGCACTCACGAGGGACTGCCAGTGATATACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATGGGCTGGGCCACACACGTGCTACAATGGCAATTACAATGGGAAGCAAGGCTGTAAGGCGGAGCGAATCCGGAAAGATTGCCTCAGTTCGGATTGTTCTCTGCAACTCGGGAACATGAAGTTGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATATGTACCCGGGCCCTGTACACACCGCCCGTCACACCCTGGGAATGGGTTTCGCCCGAAGCATCGGACCAATGATCACCCATGACTTCCGTGTACCACTAGTGCCACAAAGGCTTTTGGTGGTCTTATTGGCGCATACCACGGTGGGGTCTTCGACTGGGGTGAAGTCGTAA
Coding sequence (CDS)
ATGCGCCTAAGGAGAAAGTCTTTGCAACCGAAGTTCGCCGAGGAGCCGAGTGACGTGCCAGCGCGACTAATTGAGTGCCAGCACGTAGCAGTGCTGTCATACGCCCTGCCAAAACGGCTCCGAAACAAACAAAAAAAAAGGTGCGTGCCGCACTCACGAGGGACTGCCAGTGATATACTGGAGGAAGGTGGGGATGACGTCAAGTCCGCATGGCCCTTATGGGCTGGGCCACACACGTGCTACAATGGCAATTACAATGGGAAGCAAGGCTGTAAGGCGGAGCGAATCCGGAAAGATTGCCTCAGTTCGGATTGTTCTCTGCAACTCGGGAACATGAAGTTGGAATCGCTAGTAATCGCGGATCAGCATGCCGCGGTGAATATGTACCCGGGCCCTGTACACACCGCCCGTCACACCCTGGGAATGGGTTTCGCCCGAAGCATCGGACCAATGATCACCCATGACTTCCGTGTACCACTAGTGCCACAAAGGCTTTTGGTGGTCTTATTGGCGCATACCACGGTGGGGTCTTCGACTGGGGTGAAGTCGTAA
Protein sequence
MRLRRKSLQPKFAEEPSDVPARLIECQHVAVLSYALPKRLRNKQKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSSTGVKS
Homology
BLAST of Tan0012521 vs. NCBI nr
Match:
KAA0060781.1 (hypothetical protein E6C27_scaffold44334G00030 [Cucumis melo var. makuwa])
HSP 1 Score: 334.3 bits (856), Expect = 6.4e-88
Identity = 167/194 (86.08%), Postives = 171/194 (88.14%), Query Frame = 0
Query: 1 MRLRRKSLQPKFAEEPSDVPARLIECQHVAVLS-----------YALPKRLRNKQKKRCV 60
MRLR KSLQPKFAEEPS+VPARLIECQHVAVLS P + +RCV
Sbjct: 1 MRLRIKSLQPKFAEEPSEVPARLIECQHVAVLSASHPVVWYEVGLVRPAKTGPHYSERCV 60
Query: 61 PHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQL 120
PHSRGTAS+ILEEGGDDVKSAWPLWAGPHTCYNGN NGKQGCKAERIRKDCLSSDCSLQL
Sbjct: 61 PHSRGTASEILEEGGDDVKSAWPLWAGPHTCYNGNDNGKQGCKAERIRKDCLSSDCSLQL 120
Query: 121 GNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVL 180
GNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVL
Sbjct: 121 GNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVL 180
Query: 181 LAHTTVGSSTGVKS 184
LAHTTVGSSTGVKS
Sbjct: 181 LAHTTVGSSTGVKS 194
BLAST of Tan0012521 vs. NCBI nr
Match:
EPS74490.1 (hypothetical protein M569_00256 [Genlisea aurea])
HSP 1 Score: 315.8 bits (808), Expect = 2.4e-82
Identity = 158/184 (85.87%), Postives = 165/184 (89.67%), Query Frame = 0
Query: 1 MRLRRKSLQPKFAEEPSDVPARLIECQHVAVLS-YALPKRLRNKQKKRCVPHSRGTASDI 60
MRLRRKS QPK AEEPSDVPA LIECQH AV + YA PK +++KR VPHSR TASDI
Sbjct: 1 MRLRRKSFQPKRAEEPSDVPALLIECQHYAVSNKYAPPKLRAPEERKRRVPHSRRTASDI 60
Query: 61 LEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVI 120
LEEGGD+VKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKL+SLVI
Sbjct: 61 LEEGGDNVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLKSLVI 120
Query: 121 ADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSST 180
A QHAAVNMYPGPVHTARHTLG+GFARSIGP I HDF LVPQRLLVVLLAHTTVGSST
Sbjct: 121 AHQHAAVNMYPGPVHTARHTLGIGFARSIGPTIAHDFCGTLVPQRLLVVLLAHTTVGSST 180
Query: 181 GVKS 184
GVKS
Sbjct: 181 GVKS 184
BLAST of Tan0012521 vs. NCBI nr
Match:
KAD4385742.1 (hypothetical protein E3N88_25911 [Mikania micrantha])
HSP 1 Score: 298.1 bits (762), Expect = 5.1e-77
Identity = 156/205 (76.10%), Postives = 161/205 (78.54%), Query Frame = 0
Query: 1 MRLRRKSLQPKFAEEPSDVPARLIECQHVAVLSYA-LPKRLR------------------ 60
MRLRRK LQPK AEEPSDVPA LIECQHVAVLS A L K++
Sbjct: 1 MRLRRKYLQPKSAEEPSDVPALLIECQHVAVLSLARLTKKIERAFLAWLVKSSFWPYLAG 60
Query: 61 ------NKQKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAER 120
+K + TASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAER
Sbjct: 61 DDDVELTAEKDWAFRRAARTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAER 120
Query: 121 IRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHD 180
IRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLG+GFARSIGPMITHD
Sbjct: 121 IRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGIGFARSIGPMITHD 180
BLAST of Tan0012521 vs. NCBI nr
Match:
PPR89028.1 (hypothetical protein GOBAR_AA31648 [Gossypium barbadense])
HSP 1 Score: 290.4 bits (742), Expect = 1.1e-74
Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0
Query: 43 KQKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLS 102
KQ KRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLS
Sbjct: 190 KQTKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLS 249
Query: 103 SDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVP 162
SDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLG+GFARSIGPMITHDF VPLVP
Sbjct: 250 SDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGIGFARSIGPMITHDFCVPLVP 309
Query: 163 QRLLVVLLAHTTVGSSTGVKS 184
QRLLVVLLAHTTVGSSTGVKS
Sbjct: 310 QRLLVVLLAHTTVGSSTGVKS 330
BLAST of Tan0012521 vs. NCBI nr
Match:
PLY81935.1 (hypothetical protein LSAT_5X16200 [Lactuca sativa])
HSP 1 Score: 289.7 bits (740), Expect = 1.8e-74
Identity = 139/153 (90.85%), Postives = 142/153 (92.81%), Query Frame = 0
Query: 31 VLSYALPKRLRNKQKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQG 90
V+ P + KQ KRCVPHSR TASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQG
Sbjct: 57 VVGLVRPAKTAPKQTKRCVPHSRRTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQG 116
Query: 91 CKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGP 150
CKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLG+GFARSIGP
Sbjct: 117 CKAERIRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGIGFARSIGP 176
Query: 151 MITHDFRVPLVPQRLLVVLLAHTTVGSSTGVKS 184
MITHDF VPLVPQRLLVVLLAHTTVGSSTGVKS
Sbjct: 177 MITHDFCVPLVPQRLLVVLLAHTTVGSSTGVKS 209
BLAST of Tan0012521 vs. ExPASy TrEMBL
Match:
A0A5A7V4U9 (Uncharacterized protein ycf68 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44334G00030 PE=3 SV=1)
HSP 1 Score: 334.3 bits (856), Expect = 3.1e-88
Identity = 167/194 (86.08%), Postives = 171/194 (88.14%), Query Frame = 0
Query: 1 MRLRRKSLQPKFAEEPSDVPARLIECQHVAVLS-----------YALPKRLRNKQKKRCV 60
MRLR KSLQPKFAEEPS+VPARLIECQHVAVLS P + +RCV
Sbjct: 1 MRLRIKSLQPKFAEEPSEVPARLIECQHVAVLSASHPVVWYEVGLVRPAKTGPHYSERCV 60
Query: 61 PHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQL 120
PHSRGTAS+ILEEGGDDVKSAWPLWAGPHTCYNGN NGKQGCKAERIRKDCLSSDCSLQL
Sbjct: 61 PHSRGTASEILEEGGDDVKSAWPLWAGPHTCYNGNDNGKQGCKAERIRKDCLSSDCSLQL 120
Query: 121 GNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVL 180
GNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVL
Sbjct: 121 GNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVL 180
Query: 181 LAHTTVGSSTGVKS 184
LAHTTVGSSTGVKS
Sbjct: 181 LAHTTVGSSTGVKS 194
BLAST of Tan0012521 vs. ExPASy TrEMBL
Match:
S8D505 (Uncharacterized protein ycf68 OS=Genlisea aurea OX=192259 GN=M569_00256 PE=3 SV=1)
HSP 1 Score: 315.8 bits (808), Expect = 1.1e-82
Identity = 158/184 (85.87%), Postives = 165/184 (89.67%), Query Frame = 0
Query: 1 MRLRRKSLQPKFAEEPSDVPARLIECQHVAVLS-YALPKRLRNKQKKRCVPHSRGTASDI 60
MRLRRKS QPK AEEPSDVPA LIECQH AV + YA PK +++KR VPHSR TASDI
Sbjct: 1 MRLRRKSFQPKRAEEPSDVPALLIECQHYAVSNKYAPPKLRAPEERKRRVPHSRRTASDI 60
Query: 61 LEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVI 120
LEEGGD+VKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKL+SLVI
Sbjct: 61 LEEGGDNVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLKSLVI 120
Query: 121 ADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSST 180
A QHAAVNMYPGPVHTARHTLG+GFARSIGP I HDF LVPQRLLVVLLAHTTVGSST
Sbjct: 121 AHQHAAVNMYPGPVHTARHTLGIGFARSIGPTIAHDFCGTLVPQRLLVVLLAHTTVGSST 180
Query: 181 GVKS 184
GVKS
Sbjct: 181 GVKS 184
BLAST of Tan0012521 vs. ExPASy TrEMBL
Match:
A0A5N6N714 (Uncharacterized protein ycf68 OS=Mikania micrantha OX=192012 GN=E3N88_25911 PE=3 SV=1)
HSP 1 Score: 298.1 bits (762), Expect = 2.5e-77
Identity = 156/205 (76.10%), Postives = 161/205 (78.54%), Query Frame = 0
Query: 1 MRLRRKSLQPKFAEEPSDVPARLIECQHVAVLSYA-LPKRLR------------------ 60
MRLRRK LQPK AEEPSDVPA LIECQHVAVLS A L K++
Sbjct: 1 MRLRRKYLQPKSAEEPSDVPALLIECQHVAVLSLARLTKKIERAFLAWLVKSSFWPYLAG 60
Query: 61 ------NKQKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAER 120
+K + TASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAER
Sbjct: 61 DDDVELTAEKDWAFRRAARTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAER 120
Query: 121 IRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHD 180
IRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLG+GFARSIGPMITHD
Sbjct: 121 IRKDCLSSDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGIGFARSIGPMITHD 180
BLAST of Tan0012521 vs. ExPASy TrEMBL
Match:
A0A2P5WD68 (Uncharacterized protein ycf68 OS=Gossypium barbadense OX=3634 GN=GOBAR_AA31648 PE=3 SV=1)
HSP 1 Score: 290.4 bits (742), Expect = 5.2e-75
Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0
Query: 43 KQKKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLS 102
KQ KRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLS
Sbjct: 190 KQTKRCVPHSRGTASDILEEGGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLS 249
Query: 103 SDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVP 162
SDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLG+GFARSIGPMITHDF VPLVP
Sbjct: 250 SDCSLQLGNMKLESLVIADQHAAVNMYPGPVHTARHTLGIGFARSIGPMITHDFCVPLVP 309
Query: 163 QRLLVVLLAHTTVGSSTGVKS 184
QRLLVVLLAHTTVGSSTGVKS
Sbjct: 310 QRLLVVLLAHTTVGSSTGVKS 330
BLAST of Tan0012521 vs. ExPASy TrEMBL
Match:
A0A371IID8 (Uncharacterized protein ycf68 (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_00079 PE=3 SV=1)
HSP 1 Score: 289.7 bits (740), Expect = 8.8e-75
Identity = 142/181 (78.45%), Postives = 150/181 (82.87%), Query Frame = 0
Query: 3 LRRKSLQPKFAEEPSDVPARLIECQHVAVLSYALPKRLRNKQKKRCVPHSRGTASDILEE 62
L RK F+++ ++ A A P + KQ KRC+PHSRGT SDI EE
Sbjct: 35 LNRKGFSRLFSDDDVELAAEKDSAFRRAARWCVRPAKTAPKQTKRCMPHSRGTTSDIQEE 94
Query: 63 GGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQ 122
GGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQ
Sbjct: 95 GGDDVKSAWPLWAGPHTCYNGNYNGKQGCKAERIRKDCLSSDCSLQLGNMKLESLVIADQ 154
Query: 123 HAAVNMYPGPVHTARHTLGMGFARSIGPMITHDFRVPLVPQRLLVVLLAHTTVGSSTGVK 182
HAAVNMYPGPVHTARHTLG+GFARSIGPMITHDF VPLVPQRLLVVLLAHTTVGSSTGVK
Sbjct: 155 HAAVNMYPGPVHTARHTLGIGFARSIGPMITHDFCVPLVPQRLLVVLLAHTTVGSSTGVK 214
Query: 183 S 184
S
Sbjct: 215 S 215
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAA0060781.1 | 6.4e-88 | 86.08 | hypothetical protein E6C27_scaffold44334G00030 [Cucumis melo var. makuwa] | [more] |
EPS74490.1 | 2.4e-82 | 85.87 | hypothetical protein M569_00256 [Genlisea aurea] | [more] |
KAD4385742.1 | 5.1e-77 | 76.10 | hypothetical protein E3N88_25911 [Mikania micrantha] | [more] |
PPR89028.1 | 1.1e-74 | 97.87 | hypothetical protein GOBAR_AA31648 [Gossypium barbadense] | [more] |
PLY81935.1 | 1.8e-74 | 90.85 | hypothetical protein LSAT_5X16200 [Lactuca sativa] | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7V4U9 | 3.1e-88 | 86.08 | Uncharacterized protein ycf68 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... | [more] |
S8D505 | 1.1e-82 | 85.87 | Uncharacterized protein ycf68 OS=Genlisea aurea OX=192259 GN=M569_00256 PE=3 SV=... | [more] |
A0A5N6N714 | 2.5e-77 | 76.10 | Uncharacterized protein ycf68 OS=Mikania micrantha OX=192012 GN=E3N88_25911 PE=3... | [more] |
A0A2P5WD68 | 5.2e-75 | 97.87 | Uncharacterized protein ycf68 OS=Gossypium barbadense OX=3634 GN=GOBAR_AA31648 P... | [more] |
A0A371IID8 | 8.8e-75 | 78.45 | Uncharacterized protein ycf68 (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_0... | [more] |
Match Name | E-value | Identity | Description | |