Tan0012483 (gene) Snake gourd v1

Overview


Name	Tan0012483
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	leucine-rich repeat extensin-like protein 3
Location	LG06: 5870313 .. 5870777 (+)
RNA-Seq Expression	Tan0012483
Synteny	Tan0012483

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAATCTCATCCCCATTTTTCTCACTTTCTTCCTCTCTACACACTCAAAATTTTCCTCTGTCTCATCGGCGGCCGCCCTGGCCAAGGATCAGGTCGGCTGTTCTATGTGCTCAAGTTGTGACAATCCCTGCCAACTTCCTCCTCCGCCGGTTGTTGACTGCCCGCCGCCCCCTCCGCCGCCATCTCCGCCACCCCCACTTCCCACTTCACAATGTCCCCCTCCTCCGGCTCCCCCCTCGTGCGACGCATGCGTCTACCCTTCGCCGCCGCCGCCGTCCTCTGTCCAGCCGTACCCGCCGGCTGATGGTGGCCAATTTCCCGGCCTTGCTCCGCCGCCGCCAAACCCAATTTTACCGTATTTTCCTTACTATTATTACAGTCCCCCCTCTGCTTCTGGCAAATCCGTTTCATTTTCATGGAAAATTTTGCCTTTGGCTTTCTTGATCATTCTTTGCCTCTAA

mRNA sequence

ATGGCGAATCTCATCCCCATTTTTCTCACTTTCTTCCTCTCTACACACTCAAAATTTTCCTCTGTCTCATCGGCGGCCGCCCTGGCCAAGGATCAGGTCGGCTGTTCTATGTGCTCAAGTTGTGACAATCCCTGCCAACTTCCTCCTCCGCCGGTTGTTGACTGCCCGCCGCCCCCTCCGCCGCCATCTCCGCCACCCCCACTTCCCACTTCACAATGTCCCCCTCCTCCGGCTCCCCCCTCGTGCGACGCATGCGTCTACCCTTCGCCGCCGCCGCCGTCCTCTGTCCAGCCGTACCCGCCGGCTGATGGTGGCCAATTTCCCGGCCTTGCTCCGCCGCCGCCAAACCCAATTTTACCGTATTTTCCTTACTATTATTACAGTCCCCCCTCTGCTTCTGGCAAATCCGTTTCATTTTCATGGAAAATTTTGCCTTTGGCTTTCTTGATCATTCTTTGCCTCTAA

Coding sequence (CDS)

ATGGCGAATCTCATCCCCATTTTTCTCACTTTCTTCCTCTCTACACACTCAAAATTTTCCTCTGTCTCATCGGCGGCCGCCCTGGCCAAGGATCAGGTCGGCTGTTCTATGTGCTCAAGTTGTGACAATCCCTGCCAACTTCCTCCTCCGCCGGTTGTTGACTGCCCGCCGCCCCCTCCGCCGCCATCTCCGCCACCCCCACTTCCCACTTCACAATGTCCCCCTCCTCCGGCTCCCCCCTCGTGCGACGCATGCGTCTACCCTTCGCCGCCGCCGCCGTCCTCTGTCCAGCCGTACCCGCCGGCTGATGGTGGCCAATTTCCCGGCCTTGCTCCGCCGCCGCCAAACCCAATTTTACCGTATTTTCCTTACTATTATTACAGTCCCCCCTCTGCTTCTGGCAAATCCGTTTCATTTTCATGGAAAATTTTGCCTTTGGCTTTCTTGATCATTCTTTGCCTCTAA

Protein sequence

MANLIPIFLTFFLSTHSKFSSVSSAAALAKDQVGCSMCSSCDNPCQLPPPPVVDCPPPPPPPSPPPPLPTSQCPPPPAPPSCDACVYPSPPPPSSVQPYPPADGGQFPGLAPPPPNPILPYFPYYYYSPPSASGKSVSFSWKILPLAFLIILCL

Homology

[Close]

BLAST of Tan0012483 vs. NCBI nr
Match: KAA0046672.1 (extensin-2 [Cucumis melo var. makuwa] >TYK18207.1 extensin-2 [Cucumis melo var. makuwa])

HSP 1 Score: 238.4 bits (607), Expect = 4.0e-59
Identity = 132/159 (83.02%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 1   MANLIPIFLTFFLSTHSKFSSVSSAAALAKDQVGCSMCSSCDNPCQL----PPPPVVDCP 60
           MAN I IFLTFFL +  KFS +SSA+A+AKDQVGCSMCS+CDNPCQL    PPPPVV+CP
Sbjct: 1   MANFIFIFLTFFLFSLPKFSLLSSASAVAKDQVGCSMCSACDNPCQLPPPPPPPPVVECP 60

Query: 61  P---PPPPPSPPPPLPTSQCPPPPAPPSCDACVYPSPPPPSSVQPYPPADGGQFPGLAPP 120
           P   PPPPPSPPPPLPTSQCPPPP+PPSCDACVYPSPPPPSSVQPYPP+DGGQFPG+APP
Sbjct: 61  PPPSPPPPPSPPPPLPTSQCPPPPSPPSCDACVYPSPPPPSSVQPYPPSDGGQFPGIAPP 120

Query: 121 PPNPILPYFPYYYYSPPSASGKSVSFSWKILPLAFLIIL 153
           PPNPILPYFPYYYYSPPSAS KSV FSWK+LPL FLII+
Sbjct: 121 PPNPILPYFPYYYYSPPSASPKSVPFSWKLLPLPFLIII 159

[Close]

BLAST of Tan0012483 vs. NCBI nr
Match: XP_023549397.1 (leucine-rich repeat extensin-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.5 bits (563), Expect = 5.1e-54
Identity = 123/155 (79.35%), Postives = 135/155 (87.10%), Query Frame = 0


Query: 1   MANLIPIFLTFFLSTHSKFSSVSSAAALAKDQVGCSMCSSCDNPCQLPPPP--VVDC-PP 60
           MA+L  IFLT FL + SKF S+SSA   A+DQVGCSMCSSCDNPCQLPPPP  +VDC PP
Sbjct: 1   MADLTSIFLTLFLISLSKF-SLSSATVSARDQVGCSMCSSCDNPCQLPPPPPLIVDCSPP 60

Query: 61  PPPPPSPPPPLPTSQCPPPPAPPSCDACVYPSPPPPSSVQPYPPADGGQFPGLAPPPPNP 120
           PPPPPSPPPPLPT +CPPPP+PPSCDACVYPSPPPPSS+QPY P DGGQ+PGLAPPPPNP
Sbjct: 61  PPPPPSPPPPLPTPECPPPPSPPSCDACVYPSPPPPSSIQPYTPTDGGQYPGLAPPPPNP 120

Query: 121 ILPYFPYYYYSPPSASGKSVSFSWKILPLAFLIIL 153
           ILPYFPYYYY+PPS SGKSV FSWK LPL F++ L
Sbjct: 121 ILPYFPYYYYTPPSGSGKSVPFSWKFLPLLFILRL 154

[Close]

BLAST of Tan0012483 vs. NCBI nr
Match: XP_022953998.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita moschata])

HSP 1 Score: 213.8 bits (543), Expect = 1.1e-51
Identity = 120/159 (75.47%), Postives = 133/159 (83.65%), Query Frame = 0


Query: 1   MANLIPIFLTFFLSTHSKFSSVSSAAALAKDQVGCSMCSSCDNPCQLPPPP--VVDC--- 60
           MA+L  IFLT FL + SKF S+SS    A+DQVGCSMC+SCDNPCQLPPPP  +VDC   
Sbjct: 18  MADLTSIFLTLFLISLSKF-SLSSPTVSARDQVGCSMCASCDNPCQLPPPPPLIVDCPPP 77

Query: 61  --PPPPPPPSPPPPLPTSQCPPPPAPPSCDACVYPSPPPPSSVQPYPPADGGQFPGLAPP 120
             PPPPPPPSPPPPL T +CPPPP+PPSCDACVYPSPPPPSS+QPY P DGGQ+PGLAPP
Sbjct: 78  PSPPPPPPPSPPPPLATPECPPPPSPPSCDACVYPSPPPPSSIQPYTPTDGGQYPGLAPP 137

Query: 121 PPNPILPYFPYYYYSPPSASGKSVSFSWKILPLAFLIIL 153
           PPNPILPYFPYYYY+PPS SGKSV FSWK LPL F++ L
Sbjct: 138 PPNPILPYFPYYYYTPPSGSGKSVPFSWKFLPLLFILRL 175

[Close]

BLAST of Tan0012483 vs. NCBI nr
Match: XP_022991777.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita maxima])

HSP 1 Score: 208.0 bits (528), Expect = 5.8e-50
Identity = 118/159 (74.21%), Postives = 130/159 (81.76%), Query Frame = 0


Query: 1   MANLIPIFLTFFLSTHSKFSSVSSAAALAKDQVGCSMCSSCDNPCQLPPPP-------VV 60
           MA+L  IFLT FL + SKF S+S A   A+DQVGCSMCSSCDNPCQLPPPP       VV
Sbjct: 1   MADLTSIFLTLFLFSLSKF-SLSLATVSARDQVGCSMCSSCDNPCQLPPPPPPPPPPLVV 60

Query: 61  DCPPPPPPPSPPPPLPTSQCPPPPAPPSCDACVYPSPPPPSSVQPYPPADGGQFPGLAPP 120
           DCPPPP P  PPPPLP  +CPPPP+PPSCDACVYPSPPPPSS+QPY P DGGQ+PG+APP
Sbjct: 61  DCPPPPSP--PPPPLPKPECPPPPSPPSCDACVYPSPPPPSSIQPYTPTDGGQYPGVAPP 120

Query: 121 PPNPILPYFPYYYYSPPSASGKSVSFSWKILPLAFLIIL 153
           PPNPILPYFPYYYY+PPS SGKSV FSWK LPL F++ L
Sbjct: 121 PPNPILPYFPYYYYTPPSGSGKSVPFSWKFLPLLFVLRL 156

[Close]

BLAST of Tan0012483 vs. NCBI nr
Match: XP_023514546.1 (leucine-rich repeat extensin-like protein 6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206.8 bits (525), Expect = 1.3e-49
Identity = 113/154 (73.38%), Postives = 123/154 (79.87%), Query Frame = 0


Query: 1   MANLIPIFLTFFLSTHSKFSSVSSAAALAKDQVGCSMCSSCDNPCQLPPPPVVDCPPPPP 60
           M NL+ I+ TF L T SKFS +SSA A+AKDQVGCSMCSSCDNPCQLPP           
Sbjct: 1   MVNLVSIYFTFLLFTLSKFSFLSSATAVAKDQVGCSMCSSCDNPCQLPP----------- 60

Query: 61  PPSPPPPLPTSQCPPPPAPPSCDACVYPSPPPPSSVQPYPPADGGQFPGLAPPPPNPILP 120
              PPPP PTSQCPPPP PPSC  C++PSP PPSSVQPY PADGGQFPGLAPPPPNPILP
Sbjct: 61  ---PPPPPPTSQCPPPPPPPSCSTCIHPSPLPPSSVQPYLPADGGQFPGLAPPPPNPILP 120

Query: 121 YFPYYYYSPPSASGKSVSFSWKILPLAFLIILCL 155
           Y+PYYYYSPP+ASG+SVS SWKILPL  LII+CL
Sbjct: 121 YYPYYYYSPPTASGESVSISWKILPLGLLIIICL 140

[Close]

BLAST of Tan0012483 vs. ExPASy TrEMBL
Match: A0A5D3D2P5 (Extensin-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001460 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 2.0e-59
Identity = 132/159 (83.02%), Postives = 143/159 (89.94%), Query Frame = 0


Query: 1   MANLIPIFLTFFLSTHSKFSSVSSAAALAKDQVGCSMCSSCDNPCQL----PPPPVVDCP 60
           MAN I IFLTFFL +  KFS +SSA+A+AKDQVGCSMCS+CDNPCQL    PPPPVV+CP
Sbjct: 1   MANFIFIFLTFFLFSLPKFSLLSSASAVAKDQVGCSMCSACDNPCQLPPPPPPPPVVECP 60

Query: 61  P---PPPPPSPPPPLPTSQCPPPPAPPSCDACVYPSPPPPSSVQPYPPADGGQFPGLAPP 120
           P   PPPPPSPPPPLPTSQCPPPP+PPSCDACVYPSPPPPSSVQPYPP+DGGQFPG+APP
Sbjct: 61  PPPSPPPPPSPPPPLPTSQCPPPPSPPSCDACVYPSPPPPSSVQPYPPSDGGQFPGIAPP 120

Query: 121 PPNPILPYFPYYYYSPPSASGKSVSFSWKILPLAFLIIL 153
           PPNPILPYFPYYYYSPPSAS KSV FSWK+LPL FLII+
Sbjct: 121 PPNPILPYFPYYYYSPPSASPKSVPFSWKLLPLPFLIII 159

[Close]

BLAST of Tan0012483 vs. ExPASy TrEMBL
Match: A0A0A0K5N4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405965 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 1.3e-58
Identity = 132/159 (83.02%), Postives = 141/159 (88.68%), Query Frame = 0


Query: 1   MANLIPIFLTFFLSTHSKFSSVSSAAALAKDQVGCSMCSSCDNPCQL----PPPPVVDCP 60
           MANLI IFLTFFL + +KFS +SSA A+AKDQVGCSMCS+CDNPCQL    PPPPVV+CP
Sbjct: 1   MANLISIFLTFFLLSLTKFSLLSSATAVAKDQVGCSMCSTCDNPCQLPPPPPPPPVVECP 60

Query: 61  PP---PPPPSPPPPLPTSQCPPPPAPPSCDACVYPSPPPPSSVQPYPPADGGQFPGLAPP 120
           PP   PPPPSPPPPLPTSQCPPPP+PPSCDACVYPSPPPPSSVQPYPP+ GGQFPG+APP
Sbjct: 61  PPPPSPPPPSPPPPLPTSQCPPPPSPPSCDACVYPSPPPPSSVQPYPPSGGGQFPGIAPP 120

Query: 121 PPNPILPYFPYYYYSPPSASGKSVSFSWKILPLAFLIIL 153
           PPNPILPYFPYYYYSPPSAS KSV FSWK L L FLIIL
Sbjct: 121 PPNPILPYFPYYYYSPPSASPKSVPFSWKFLALPFLIIL 159

[Close]

BLAST of Tan0012483 vs. ExPASy TrEMBL
Match: A0A6J1GPW6 (leucine-rich repeat extensin-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111456389 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 5.2e-52
Identity = 120/159 (75.47%), Postives = 133/159 (83.65%), Query Frame = 0


Query: 1   MANLIPIFLTFFLSTHSKFSSVSSAAALAKDQVGCSMCSSCDNPCQLPPPP--VVDC--- 60
           MA+L  IFLT FL + SKF S+SS    A+DQVGCSMC+SCDNPCQLPPPP  +VDC   
Sbjct: 18  MADLTSIFLTLFLISLSKF-SLSSPTVSARDQVGCSMCASCDNPCQLPPPPPLIVDCPPP 77

Query: 61  --PPPPPPPSPPPPLPTSQCPPPPAPPSCDACVYPSPPPPSSVQPYPPADGGQFPGLAPP 120
             PPPPPPPSPPPPL T +CPPPP+PPSCDACVYPSPPPPSS+QPY P DGGQ+PGLAPP
Sbjct: 78  PSPPPPPPPSPPPPLATPECPPPPSPPSCDACVYPSPPPPSSIQPYTPTDGGQYPGLAPP 137

Query: 121 PPNPILPYFPYYYYSPPSASGKSVSFSWKILPLAFLIIL 153
           PPNPILPYFPYYYY+PPS SGKSV FSWK LPL F++ L
Sbjct: 138 PPNPILPYFPYYYYTPPSGSGKSVPFSWKFLPLLFILRL 175

[Close]

BLAST of Tan0012483 vs. ExPASy TrEMBL
Match: A0A6J1JMT5 (leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111488311 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.8e-50
Identity = 118/159 (74.21%), Postives = 130/159 (81.76%), Query Frame = 0


Query: 1   MANLIPIFLTFFLSTHSKFSSVSSAAALAKDQVGCSMCSSCDNPCQLPPPP-------VV 60
           MA+L  IFLT FL + SKF S+S A   A+DQVGCSMCSSCDNPCQLPPPP       VV
Sbjct: 1   MADLTSIFLTLFLFSLSKF-SLSLATVSARDQVGCSMCSSCDNPCQLPPPPPPPPPPLVV 60

Query: 61  DCPPPPPPPSPPPPLPTSQCPPPPAPPSCDACVYPSPPPPSSVQPYPPADGGQFPGLAPP 120
           DCPPPP P  PPPPLP  +CPPPP+PPSCDACVYPSPPPPSS+QPY P DGGQ+PG+APP
Sbjct: 61  DCPPPPSP--PPPPLPKPECPPPPSPPSCDACVYPSPPPPSSIQPYTPTDGGQYPGVAPP 120

Query: 121 PPNPILPYFPYYYYSPPSASGKSVSFSWKILPLAFLIIL 153
           PPNPILPYFPYYYY+PPS SGKSV FSWK LPL F++ L
Sbjct: 121 PPNPILPYFPYYYYTPPSGSGKSVPFSWKFLPLLFVLRL 156

[Close]

BLAST of Tan0012483 vs. ExPASy TrEMBL
Match: A0A6J1H7D0 (glyceraldehyde-3-phosphate dehydrogenase, testis-specific-like OS=Cucurbita moschata OX=3662 GN=LOC111461151 PE=4 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 5.3e-49
Identity = 114/155 (73.55%), Postives = 123/155 (79.35%), Query Frame = 0


Query: 1   MANLIPIFLTFFLSTHSKFSSVSSAAALAKDQVGCSMCSSCDNPCQLPPPPVVDCPPPPP 60
           MANL+ I  TF L TH KFS +SSA A+AKDQVGCSMCSSCDNPCQLPPPP         
Sbjct: 1   MANLVSIHFTFLLFTHYKFSFLSSATAVAKDQVGCSMCSSCDNPCQLPPPP--------- 60

Query: 61  PPSPPPPLPTSQCPPPPAPPSCDACVYPSPPPPSSVQPYPPADGGQFPGLA-PPPPNPIL 120
              PPPP PTSQCPPPP PPSC  C++PSP PPSSVQPY PADG QFPGLA PPPPNPIL
Sbjct: 61  ---PPPPPPTSQCPPPPPPPSCSTCIHPSPLPPSSVQPYQPADGDQFPGLAPPPPPNPIL 120

Query: 121 PYFPYYYYSPPSASGKSVSFSWKILPLAFLIILCL 155
           PY+PYYYYSPP+ASG+ VS SWKILPL  LII+CL
Sbjct: 121 PYYPYYYYSPPTASGEIVSISWKILPLGLLIIICL 143

[Close]

BLAST of Tan0012483 vs. TAIR 10
Match: AT5G49280.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 77.8 bits (190), Expect = 8.5e-15
Identity = 67/151 (44.37%), Postives = 81/151 (53.64%), Query Frame = 0


Query: 21  SVSSAAALAKDQVGCSMCSSCDNPCQLPPPPVVDCPPPPPPPSPPPPLPTSQCPPPPAPP 80
           SV+       + V C+MCSSCDNPC     PV   PPPP P  PPP  PT+ CPPPP+PP
Sbjct: 19  SVTPTVTSKDEVVSCTMCSSCDNPCS----PVQSSPPPPSP--PPPSTPTTACPPPPSPP 78

Query: 81  SC---DACVYPSP---------PPP----SSVQPYPPADGGQFPGLAPPPPNPILPYFPY 140
           S     +  YP P         PPP         YPP   G +P   PPPPNPI+PYFP+
Sbjct: 79  SSGGGSSYYYPPPSQSGGGSKYPPPYGGGGQGYYYPPPYSGNYP--TPPPPNPIVPYFPF 138

Query: 141 YYYSPPSASGKS-VSFSWKILPLAFLIILCL 155
           YY++PP  SG      S+ I+   F + LCL
Sbjct: 139 YYHTPPPGSGSDRFMSSYSIIFALFAVFLCL 161

[Close]

BLAST of Tan0012483 vs. TAIR 10
Match: AT4G16140.1 (proline-rich family protein )

HSP 1 Score: 68.6 bits (166), Expect = 5.2e-12
Identity = 71/166 (42.77%), Postives = 95/166 (57.23%), Query Frame = 0


Query: 7   IFLTFFLSTHSKFSSVSSAAALAKDQVGCSMCSSCDNPCQLPPPPVVDCPPPPPPPSPPP 66
           +FL FF  T +  ++++S + +A     C+MC+SCDNPCQ  P P    PPPP  PSPPP
Sbjct: 9   LFLFFFFFTFT--TTLTSPSQIA----DCTMCTSCDNPCQPNPSP----PPPPSNPSPPP 68

Query: 67  PLP-TSQCPPPPA----------PPSCDACVYPSPPPPSSVQPY--PPADGGQFPGLAPP 126
           P P T+ CPPPP+          PP+  +  Y  PP  SS   Y  PP  GG +P    P
Sbjct: 69  PSPTTTACPPPPSSSGGGPYYYYPPASQSGSYRPPPSSSSGGYYYPPPKSGGNYP--YTP 128

Query: 127 PPNPILPYFPYYYYSPP-----SASGKSVSFSWKILPLAFLIILCL 155
           PPNPI+PYFP+YYY+PP     S S   + FS+ +   +F++I  L
Sbjct: 129 PPNPIVPYFPFYYYNPPPQSVMSGSDAKIRFSYGV---SFILIFSL 159

[Close]

BLAST of Tan0012483 vs. TAIR 10
Match: AT3G06750.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 49.7 bits (117), Expect = 2.5e-06
Identity = 54/127 (42.52%), Postives = 66/127 (51.97%), Query Frame = 0


Query: 29  AKDQ-VGCSMCSSCDNPCQLPPPPVVDCPPPPPPPSPPPPLPTSQCPPPPAPPSCDACVY 88
           +KD+ V C+MCSSCDNPC   P P    PPPPPP S          PPPP+  S     Y
Sbjct: 25  SKDETVSCTMCSSCDNPCN--PVPSSYSPPPPPPSSSGGGGSYYYSPPPPS--SSGGVKY 84

Query: 89  PSPPPPSSVQP-YPPADGGQFPGLAPPPPNPILPYFPYYYYSPPSASGKSVSFSWKILPL 148
           P P         YPP   G +    PPPPNPI+PYFP+YY++PP     S      +L  
Sbjct: 85  PPPYGGDGYGGYYPPPYYGNYG--TPPPPNPIVPYFPFYYHTPPQGYSGSARLQNSLLFA 144

Query: 149 AFLIILC 154
            F ++LC
Sbjct: 145 LFAVLLC 145

The following BLAST results are available for this feature:

BLAST of Tan0012483 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0012483 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046672.1	4.0e-59	83.02	extensin-2 [Cucumis melo var. makuwa] >TYK18207.1 extensin-2 [Cucumis melo var. ...	[more]
XP_023549397.1	5.1e-54	79.35	leucine-rich repeat extensin-like protein 6 [Cucurbita pepo subsp. pepo]	[more]
XP_022953998.1	1.1e-51	75.47	leucine-rich repeat extensin-like protein 3 [Cucurbita moschata]	[more]
XP_022991777.1	5.8e-50	74.21	leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]	[more]
XP_023514546.1	1.3e-49	73.38	leucine-rich repeat extensin-like protein 6 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Tan0012483 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D2P5	2.0e-59	83.02	Extensin-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001460 PE...	[more]
A0A0A0K5N4	1.3e-58	83.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G405965 PE=4 SV=1	[more]
A0A6J1GPW6	5.2e-52	75.47	leucine-rich repeat extensin-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1JMT5	2.8e-50	74.21	leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1H7D0	5.3e-49	73.55	glyceraldehyde-3-phosphate dehydrogenase, testis-specific-like OS=Cucurbita mosc...	[more]

BLAST of Tan0012483 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49280.1	8.5e-15	44.37	hydroxyproline-rich glycoprotein family protein	[more]
AT4G16140.1	5.2e-12	42.77	proline-rich family protein	[more]
AT3G06750.1	2.5e-06	42.52	hydroxyproline-rich glycoprotein family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 52..111
None	No IPR available	PANTHER	PTHR37702	PROLINE-RICH FAMILY PROTEIN	coord: 7..143
None	No IPR available	PANTHER	PTHR37702:SF9	PROLINE-RICH FAMILY PROTEIN	coord: 7..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0012483.1	Tan0012483.1	mRNA