Tan0012455 (gene) Snake gourd v1

Overview


Name	Tan0012455
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	UDP-galactose transporter 2-like
Location	LG10: 24740746 .. 24744719 (+)
RNA-Seq Expression	Tan0012455
Synteny	Tan0012455

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGATATTCTTCTTCGTTTAGGGTTACCAAACGAAAGGCAACGACCACCGTTTTCCAAAGGCAGCCACCATCGTTTCCCCAAATTTCTTCATCTTCGTCAAATTCGCACTCTGCCTCAGGGTCGTCCGAGCATCATCTCTACCATCGTCTCATAATATGTACCTTCCACCACAGATTATCCCATTGGTGCTTCCTTTTCTTCGAGTTGTTGTTTGGGATTAATTATATGAAGTTGTTACTCCTCCCTCCATTCGATTGTTCTTCTCCGGCAACGAACCAACAACTAACTTCGGCGAGCCTAGAAGATTTTGATTAGCTTCCTGAAAATTAGTTTCCTCTGAAGTCGATTGGGATTAATTAGCTTCCTTAACCTTCTACAAGCAAAGTATGGAAACTAGAAGATTTTGAACCCTATCCTGCTTTATCGGTAAAATTCGTTCCCATTTGGTTCAATTTTCACTTGTTCTGTTTTAGACTAGCGTTTGTTCAAGCATTTCTTCGTTTTTTGGAGGTTATGTTCATTTGTAATTATTGCCCATTTGTGATATACTTGAAAAAAGATATTGTGAAACTTTCCAATTTCTATATGAAGGTACAAAGGATTTGGTCCTTTTTTTCTTTGTTTTTCCCTTTGTTTGCTTCTTAGTTTTGTGTGTTGTTACAACAGTAACTTTGAAGTTTATACAATAAAGTTTATACCATTATCATTCGCAAGTTTGGTCTATATAAATTATGATCTTCATTCTCCTTTGTTTCCATTACTAGTCTTATCATTCCCTGTTTTAAGAAGTTTCCTTCCATATTTAGTAACTTGTGTTTGTTTTCTGGCGTTGTCCATGTGATAGCTTAAGAAATAATAACATTCTCAAGTTTCACTTTCGTCCACTGTCTAAATTTGCACACTTGTGGTTCCTTCTTAAAGAAAAATTTTAATTTATATCTTAACCTAATAATTGAGTAACATTGTTGTAATCTGCACGTAATGTACATACCTATAATCAAAAGAAAGGGGGTAGAAATGAGAAACTTATATTATGTGCTCTCTCTGCCTCTCCCTCTCCCTCTCTCTAGAAAATTATTAGATTAACTAAAAATGGAAAAATAATGGGATGACTAAATGTTGTTCTTCCAAACAAAAGCTTAGAAGATTGGAGGAAAGCTCTCCAAGTGGGTTAACTAACAAATAGATTAGTTACAGACTGTGGGATATGTGCTCAAAATTAAAAGCTGCTGCTGATTTTTGTTGCTTATCAATAACTGGATATATGTTTTTGGAGTTTTCTGAAAATATTCCTTTTACCAAAATAAAGTCATCCGACAATGCTATCATTTGTATGTGAGCTCTAGCTCGTTTAATTTTTTGAACAAAATAAGTATGTGAATGGAAATTGTGAGAGAATAATGTCCTGTGGCATGAATCAAACATCAGGGGGAACACACTTGAACATTCATCTTGTAGAGAGGTTAACTGATGCTGTGAACGGATGAGAGTTTTACTATGTATAAAACAGCTCAGTGATAGTGTTGGAAAACACATAAGTGATCTCATTATTAATCCTGTTATTCTTGTTGATATATTGAACTCTTTCCTTTTTTAAAAAAAAAGAAGTGGTGCTTTTTATTGCATTAGATATTCTAGGACTTATGTGTTGGGGTGAATGTTGTGTGTGCATGAACACTTCTTGGATTTAAGTTTAATGGCAACTTTTTTAAGAAGGTAAAACTAAAAATGTACTACATATAAGAAAGAAGCAGGTAAAAAATTCCAATCAAATTGCTCTATAGTTTTGTAATGAACTTACAAAAAGTATGTATGAAGGTATGAGTCTCGTAAGTTTGAAGTGTGAAGTTTGGTAATGAACCTACAAAAAGTATGTATGAGGTATGAGTCTCTAATGAACCTACAAAAAGTCATTCTCTTGGGTGTTGGAGTATGCACTGTAACTGATGTCAGTGTCAATACCAGAGGATTTATCGTTGCCATTATCGTCATATGGAGCACTTCTCTGCAACAATATGTGAGTTATTCACCTTCCTATAGCATTTATCTTCAAATCTTCTTTGTGTTCCAGATAATGCTAGAGGATTTCCTTGTTACAAAAAGCATAAATATCAACTACTCATGTTTACTAAGAATAGGCTGACATATGCCAATCGCATTCCTGAAAACAAAACATTTGGCAACAATATTCCAAATTTCTTGTTGTAATGATGACTTGATAAAACTTTGATATGCAGTTTGTGCATTTCCTCCAACGGAAGTATTCGCTTAGTTCGTTAAACCTATTGGGACATACGACTCCAACACAGGTTGCATCGCTTCTACTGATAGGACCCTTTCTTGACTACTGGTTGACAAGCACAAGGGTAGATCAATATGACTACAATTTAGCCTCTCTATCGTAAGTACCTATTACTTTCCTTCCATTTTCAAAAGCTTTGGTCTGATTTATATCTTTGGTAGATCAATATGACCCTTTAATCGACTGATAGGACCCTTTAATTGTTGTGTTATTTTGATGAGTATATTTATAGTTTTGATAAACTTAGTTTGGCGTAACGTAATTTCCAGGTTATTTGGCATCGAGATGCAATTTCCAACAAACTTTTTATTCCTTTAAGCGCCGAATTGTGAGGCTATGAAGTCCATTTTCTCCCTCTTTAGTCTAGTTTAGCACTTGAGAATTGTTGGAACTTTTCTGGTTTAAGTGCACTTGTAGGATTGCTTGTTCTGCTAAACTTTCTTGGCATGTTTTAAATCATAAGTCGTGTTTTGAGTATTTATGAAATTAGTCTTATTCTGCTGAGAAATATCTGATTGTTGAGCCCCCACCCTAGTGTATTTGAAGTTAGTGGGTGGCTGGGAAGAATGGTTTATTTTTGAAGTGTTTCTGATGTTAAAACAGGTCATTGAAATTTTGGAAAAGTCCTAGTAGCATCGTTATGCTGCTTAAATTTCGAAGTGAACGATGTGTCTTAAGTTACGCCTATGTTAGGTTTACCCTCAGAATTTAGGATCGTTACACTTTGCATGTTTTGTGATTCGGGCATCCTCCAACACACTTTCAACAAAGCGTTTCAACTTTTTTAGCAAGGTTAGTCCCTTTAAGCTCATTCAAACTAGATTAAATTATCCTACATTGGTACTATTGCTCGAATACCTTTTAATTGTACTTTTTAATACTTTCATCTATGGGTCATAACACGAATAGGTTCATTTTGGTTAACCATAAGCCATGGAAGTCGATTTAGCAAAACGAAGTTGACCCGAGCATCAACTAGCGAGGCTTTGAGCCATTTTGGTAAATCTAAGTGCATTTTAATCTTTTTCAAACCCCTTTAAGTGTTGTAAGTATGTTAATCGTCTTAATCCTCCTTGGTCGACGTTTATGACATTAGGCTAGATCTCATTCCCTCCCTTTGAGCATGCTTCTTAGGATTAGCGTGAGGGTTTCTTTCCTTCACTATTCAGGATGCGAGGGAATGAGTGGAGTAGGCAGATGGGTAGCCAGTATTCGAGATCGTTGTGTTTTAAGAGGGGTTGACATGATTGAGTAAATTCACTCGTTGCATGTTTTAGAGTTCTGAATTATTAGAGGTAGGTTGCTTATTTAGTATGTTTATGCTCACCCTTGTTGCTTAATGTTGTGTTTTACAGGTAATACTCAACTACTTGGCGGGTGACAAAGGTGTTGCAGAATTATGGTGACGTTTTCAAAATTTTGGTCGTAATGTAGTCAATAAGTTTCATGTTTAAACCCTTTACAATGTGTTAGGCTAGTGAATGTAAAGTTCTCTTGTTTTGTAAGCCTCCTTGAATGTTAGTTGAGTTTATGGCTTAGGATCGTTATAATAGTTCTTGTAATTTTTGAATTGTTGACATGAGGTTTGATAAATCCTTGTAATTTTAGAATTGTTCATGAGCTTAATAGTTTGATCTTGTTAAAGATGTGAATTTTGTTAAAGTGTGGAAG

mRNA sequence

TTGATATTCTTCTTCGTTTAGGGTTACCAAACGAAAGGCAACGACCACCGTTTTCCAAAGGCAGCCACCATCGTTTCCCCAAATTTCTTCATCTTCGTCAAATTCGCACTCTGCCTCAGGGTCGTCCGAGCATCATCTCTACCATCGTCTCATAATATGTACCTTCCACCACAGATTATCCCATTGGTGCTTCCTTTTCTTCGAGTTGTTGTTTGGGATTAATTATATGAAGTTGTTACTCCTCCCTCCATTCGATTGTTCTTCTCCGGCAACGAACCAACAACTAACTTCGGCGAGCCTAGAAGATTTTGATTAGCTTCCTGAAAATTAGTTTCCTCTGAAGTCGATTGGGATTAATTAGCTTCCTTAACCTTCTACAAGCAAAGTATGGAAACTAGAAGATTTTGAACCCTATCCTGCTTTATCGGTATGAGTCTCGTAAGTTTGAAGTGTGAAGTTTGGTAATGAACCTACAAAAAGTATGTATGAGGTATGAGTCTCTAATGAACCTACAAAAAGTCATTCTCTTGGGTGTTGGAGTATGCACTGTAACTGATGTCAGTGTCAATACCAGAGGATTTATCGTTGCCATTATCGTCATATGGAGCACTTCTCTGCAACAATATTTTGTGCATTTCCTCCAACGGAAGTATTCGCTTAGTTCGTTAAACCTATTGGGACATACGACTCCAACACAGGTTGCATCGCTTCTACTGATAGGACCCTTTCTTGACTACTGGTTGACAAGCACAAGGGTAGATCAATATGACTACAATTTAGCCTCTCTATCGTCATTGAAATTTTGGAAAAGTCCTAGTAGCATCGTTATGCTGCTTAAATTTCGAAGTGAACGATGTGTCTTAAGTTACGCCTATGTTAGGTTTACCCTCAGAATTTAGGATCGTTACACTTTGCATGTTTTGTGATTCGGGCATCCTCCAACACACTTTCAACAAAGCGTTTCAACTTTTTTAGCAAGGTTCATTTTGGTTAACCATAAGCCATGGAAGTCGATTTAGCAAAACGAAGTTGACCCGAGCATCAACTAGCGAGGCTTTGAGCCATTTTGGTAATACTCAACTACTTGGCGGGTGACAAAGGTGTTGCAGAATTATGGTGACGTTTTCAAAATTTTGGTCGTAATGTAGTCAATAAGTTTCATGTTTAAACCCTTTACAATGTGTTAGGCTAGTGAATGTAAAGTTCTCTTGTTTTGTAAGCCTCCTTGAATGTTAGTTGAGTTTATGGCTTAGGATCGTTATAATAGTTCTTGTAATTTTTGAATTGTTGACATGAGGTTTGATAAATCCTTGTAATTTTAGAATTGTTCATGAGCTTAATAGTTTGATCTTGTTAAAGATGTGAATTTTGTTAAAGTGTGGAAG

Coding sequence (CDS)

ATGAACCTACAAAAAGTATGTATGAGGTATGAGTCTCTAATGAACCTACAAAAAGTCATTCTCTTGGGTGTTGGAGTATGCACTGTAACTGATGTCAGTGTCAATACCAGAGGATTTATCGTTGCCATTATCGTCATATGGAGCACTTCTCTGCAACAATATTTTGTGCATTTCCTCCAACGGAAGTATTCGCTTAGTTCGTTAAACCTATTGGGACATACGACTCCAACACAGGTTGCATCGCTTCTACTGATAGGACCCTTTCTTGACTACTGGTTGACAAGCACAAGGGTAGATCAATATGACTACAATTTAGCCTCTCTATCGTCATTGAAATTTTGGAAAAGTCCTAGTAGCATCGTTATGCTGCTTAAATTTCGAAGTGAACGATGTGTCTTAAGTTACGCCTATGTTAGGTTTACCCTCAGAATTTAG

Protein sequence

MNLQKVCMRYESLMNLQKVILLGVGVCTVTDVSVNTRGFIVAIIVIWSTSLQQYFVHFLQRKYSLSSLNLLGHTTPTQVASLLLIGPFLDYWLTSTRVDQYDYNLASLSSLKFWKSPSSIVMLLKFRSERCVLSYAYVRFTLRI

Homology

[Close]

BLAST of Tan0012455 vs. ExPASy Swiss-Prot
Match: Q9FDZ5 (UDP-rhamnose/UDP-galactose transporter 6 OS=Arabidopsis thaliana OX=3702 GN=URGT6 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-33
Identity = 64/90 (71.11%), Postives = 79/90 (87.78%), Query Frame = 0


Query: 19  VILLGVGVCTVTDVSVNTRGFIVAIIVIWSTSLQQYFVHFLQRKYSLSSLNLLGHTTPTQ 78
           ++L+GVGVCTVTDVSVNT+GF+ A + +WST+LQQY+VH+LQRKYSL+S NLLGHT P Q
Sbjct: 137 LVLVGVGVCTVTDVSVNTKGFVAAFVAVWSTALQQYYVHYLQRKYSLNSFNLLGHTAPAQ 196

Query: 79  VASLLLIGPFLDYWLTSTRVDQYDYNLASL 109
            A+LL++GPFLDYWLT  RVD YDYNL S+
Sbjct: 197 AATLLVVGPFLDYWLTEKRVDMYDYNLVSV 226

[Close]

BLAST of Tan0012455 vs. ExPASy Swiss-Prot
Match: Q9SZ96 (UDP-rhamnose/UDP-galactose transporter 5 OS=Arabidopsis thaliana OX=3702 GN=URGT5 PE=1 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 2.2e-33
Identity = 64/90 (71.11%), Postives = 78/90 (86.67%), Query Frame = 0


Query: 19  VILLGVGVCTVTDVSVNTRGFIVAIIVIWSTSLQQYFVHFLQRKYSLSSLNLLGHTTPTQ 78
           ++L+GVGVCTVTDVSVNT+GF+ A + +WST+LQQY+VH+LQRKYSLSS NLLGHT P Q
Sbjct: 137 LVLVGVGVCTVTDVSVNTKGFVAAFVAVWSTALQQYYVHYLQRKYSLSSFNLLGHTAPAQ 196

Query: 79  VASLLLIGPFLDYWLTSTRVDQYDYNLASL 109
            A+LL++GPFLDYWLT  RVD YDYN  S+
Sbjct: 197 AATLLIVGPFLDYWLTDKRVDMYDYNSVSV 226

[Close]

BLAST of Tan0012455 vs. ExPASy Swiss-Prot
Match: Q8RWW7 (UDP-rhamnose/UDP-galactose transporter 4 OS=Arabidopsis thaliana OX=3702 GN=URGT4 PE=1 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 8.5e-30
Identity = 61/90 (67.78%), Postives = 73/90 (81.11%), Query Frame = 0


Query: 19  VILLGVGVCTVTDVSVNTRGFIVAIIVIWSTSLQQYFVHFLQRKYSLSSLNLLGHTTPTQ 78
           ++L GV VCTVTDVSVN  GF+ A I +WST+LQQY+VH+LQRKYSL S NLL HT P Q
Sbjct: 142 LVLAGVAVCTVTDVSVNLNGFLAAAIAVWSTALQQYYVHYLQRKYSLGSFNLLAHTAPVQ 201

Query: 79  VASLLLIGPFLDYWLTSTRVDQYDYNLASL 109
            ASLLL+GPFLDYWLT+ RVD Y+++  SL
Sbjct: 202 AASLLLVGPFLDYWLTNQRVDAYNFSFVSL 231

[Close]

BLAST of Tan0012455 vs. ExPASy Swiss-Prot
Match: Q9LPU2 (UDP-rhamnose/UDP-galactose transporter 2 OS=Arabidopsis thaliana OX=3702 GN=URGT2 PE=1 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 4.9e-17
Identity = 43/90 (47.78%), Postives = 61/90 (67.78%), Query Frame = 0


Query: 19  VILLGVGVCTVTDVSVNTRGFIVAIIVIWSTSLQQYFVHFLQRKYSLSSLNLLGHTTPTQ 78
           V+++GVG+CTVTDV VN +GFI A   ++STSLQQ  +  LQ+KYS+ S  LL  T P Q
Sbjct: 140 VVVVGVGICTVTDVKVNAKGFICACTAVFSTSLQQISIGSLQKKYSIGSFELLSKTAPIQ 199

Query: 79  VASLLLIGPFLDYWLTSTRVDQYDYNLASL 109
             SLL+ GPF+DY+L+   +  Y    +++
Sbjct: 200 AISLLIFGPFVDYFLSGRFISTYKMTYSAM 229

[Close]

BLAST of Tan0012455 vs. ExPASy Swiss-Prot
Match: Q9SRE4 (UDP-rhamnose/UDP-galactose transporter 1 OS=Arabidopsis thaliana OX=3702 GN=URGT1 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-16
Identity = 43/90 (47.78%), Postives = 59/90 (65.56%), Query Frame = 0


Query: 19  VILLGVGVCTVTDVSVNTRGFIVAIIVIWSTSLQQYFVHFLQRKYSLSSLNLLGHTTPTQ 78
           V+++GVG+CTVTDV VN +GFI A   ++STSLQQ  +  LQ+KYS+ S  LL  T P Q
Sbjct: 139 VVVIGVGICTVTDVKVNAKGFICACTAVFSTSLQQISIGSLQKKYSVGSFELLSKTAPIQ 198

Query: 79  VASLLLIGPFLDYWLTSTRVDQYDYNLASL 109
             SLL+ GPF+DY L+   +  Y     ++
Sbjct: 199 AISLLICGPFVDYLLSGKFISTYQMTYGAI 228

[Close]

BLAST of Tan0012455 vs. NCBI nr
Match: XP_023535468.1 (UDP-rhamnose/UDP-galactose transporter 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 158.3 bits (399), Expect = 5.0e-35
Identity = 77/89 (86.52%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 19  VILLGVGVCTVTDVSVNTRGFIVAIIVIWSTSLQQYFVHFLQRKYSLSSLNLLGHTTPTQ 78
           V+LLGVGVCTVTDVSVNT+GFI AII +WSTSLQQY+VHFLQRKYSLSS NLLGHT P Q
Sbjct: 137 VVLLGVGVCTVTDVSVNTKGFIAAIIAVWSTSLQQYYVHFLQRKYSLSSFNLLGHTAPAQ 196

Query: 79  VASLLLIGPFLDYWLTSTRVDQYDYNLAS 108
            ASLLLIGPFLDYWLT TRVDQYDYNL S
Sbjct: 197 AASLLLIGPFLDYWLTRTRVDQYDYNLPS 225

[Close]

BLAST of Tan0012455 vs. NCBI nr
Match: XP_022922419.1 (UDP-rhamnose/UDP-galactose transporter 6-like [Cucurbita moschata])

HSP 1 Score: 158.3 bits (399), Expect = 5.0e-35
Identity = 77/89 (86.52%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 19  VILLGVGVCTVTDVSVNTRGFIVAIIVIWSTSLQQYFVHFLQRKYSLSSLNLLGHTTPTQ 78
           V+LLGVGVCTVTDVSVNT+GFI AII +WSTSLQQY+VHFLQRKYSLSS NLLGHT P Q
Sbjct: 137 VVLLGVGVCTVTDVSVNTKGFIAAIIAVWSTSLQQYYVHFLQRKYSLSSFNLLGHTAPAQ 196

Query: 79  VASLLLIGPFLDYWLTSTRVDQYDYNLAS 108
            ASLLLIGPFLDYWLT TRVDQYDYNL S
Sbjct: 197 AASLLLIGPFLDYWLTRTRVDQYDYNLPS 225

[Close]

BLAST of Tan0012455 vs. NCBI nr
Match: XP_022990401.1 (UDP-rhamnose/UDP-galactose transporter 6 [Cucurbita maxima] >KAG6602196.1 UDP-rhamnose/UDP-galactose transporter 5, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032878.1 UDP-rhamnose/UDP-galactose transporter 5 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 158.3 bits (399), Expect = 5.0e-35
Identity = 77/89 (86.52%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 19  VILLGVGVCTVTDVSVNTRGFIVAIIVIWSTSLQQYFVHFLQRKYSLSSLNLLGHTTPTQ 78
           V+LLGVGVCTVTDVSVNT+GFI AII +WSTSLQQY+VHFLQRKYSLSS NLLGHT P Q
Sbjct: 137 VVLLGVGVCTVTDVSVNTKGFIAAIIAVWSTSLQQYYVHFLQRKYSLSSFNLLGHTAPAQ 196

Query: 79  VASLLLIGPFLDYWLTSTRVDQYDYNLAS 108
            ASLLLIGPFLDYWLT TRVDQYDYNL S
Sbjct: 197 AASLLLIGPFLDYWLTRTRVDQYDYNLPS 225

[Close]

BLAST of Tan0012455 vs. NCBI nr
Match: XP_022134335.1 (UDP-rhamnose/UDP-galactose transporter 6 [Momordica charantia])

HSP 1 Score: 156.4 bits (394), Expect = 1.9e-34
Identity = 75/90 (83.33%), Postives = 81/90 (90.00%), Query Frame = 0


Query: 19  VILLGVGVCTVTDVSVNTRGFIVAIIVIWSTSLQQYFVHFLQRKYSLSSLNLLGHTTPTQ 78
           V+LLGVGVCTVTDVSVNTRGF+ A+I +WSTSLQQY+VHFLQRKYSLSS NLLGHT P Q
Sbjct: 137 VVLLGVGVCTVTDVSVNTRGFVAAVIAVWSTSLQQYYVHFLQRKYSLSSFNLLGHTAPAQ 196

Query: 79  VASLLLIGPFLDYWLTSTRVDQYDYNLASL 109
            ASLLLIGPFLDYWLT  RVDQYDYNL S+
Sbjct: 197 AASLLLIGPFLDYWLTVKRVDQYDYNLPSI 226

[Close]

BLAST of Tan0012455 vs. NCBI nr
Match: XP_004140956.1 (UDP-rhamnose/UDP-galactose transporter 6 [Cucumis sativus] >KGN46117.1 hypothetical protein Csa_005551 [Cucumis sativus])

HSP 1 Score: 156.4 bits (394), Expect = 1.9e-34
Identity = 74/89 (83.15%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 19  VILLGVGVCTVTDVSVNTRGFIVAIIVIWSTSLQQYFVHFLQRKYSLSSLNLLGHTTPTQ 78
           V+LLGVGVCTVTDVSVNTRGF+ AII +WSTSLQQY+VHFLQRKYSLSS NLLGHT P Q
Sbjct: 137 VVLLGVGVCTVTDVSVNTRGFVAAIIAVWSTSLQQYYVHFLQRKYSLSSFNLLGHTAPAQ 196

Query: 79  VASLLLIGPFLDYWLTSTRVDQYDYNLAS 108
             SLL++GPFLDYWLT+ RVDQYDYNLAS
Sbjct: 197 AGSLLVVGPFLDYWLTTKRVDQYDYNLAS 225

[Close]

BLAST of Tan0012455 vs. ExPASy TrEMBL
Match: A0A6J1JMU8 (UDP-rhamnose/UDP-galactose transporter 6 OS=Cucurbita maxima OX=3661 GN=LOC111487270 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.4e-35
Identity = 77/89 (86.52%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 19  VILLGVGVCTVTDVSVNTRGFIVAIIVIWSTSLQQYFVHFLQRKYSLSSLNLLGHTTPTQ 78
           V+LLGVGVCTVTDVSVNT+GFI AII +WSTSLQQY+VHFLQRKYSLSS NLLGHT P Q
Sbjct: 137 VVLLGVGVCTVTDVSVNTKGFIAAIIAVWSTSLQQYYVHFLQRKYSLSSFNLLGHTAPAQ 196

Query: 79  VASLLLIGPFLDYWLTSTRVDQYDYNLAS 108
            ASLLLIGPFLDYWLT TRVDQYDYNL S
Sbjct: 197 AASLLLIGPFLDYWLTRTRVDQYDYNLPS 225

[Close]

BLAST of Tan0012455 vs. ExPASy TrEMBL
Match: A0A6J1E3B5 (UDP-rhamnose/UDP-galactose transporter 6-like OS=Cucurbita moschata OX=3662 GN=LOC111430421 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.4e-35
Identity = 77/89 (86.52%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 19  VILLGVGVCTVTDVSVNTRGFIVAIIVIWSTSLQQYFVHFLQRKYSLSSLNLLGHTTPTQ 78
           V+LLGVGVCTVTDVSVNT+GFI AII +WSTSLQQY+VHFLQRKYSLSS NLLGHT P Q
Sbjct: 137 VVLLGVGVCTVTDVSVNTKGFIAAIIAVWSTSLQQYYVHFLQRKYSLSSFNLLGHTAPAQ 196

Query: 79  VASLLLIGPFLDYWLTSTRVDQYDYNLAS 108
            ASLLLIGPFLDYWLT TRVDQYDYNL S
Sbjct: 197 AASLLLIGPFLDYWLTRTRVDQYDYNLPS 225

[Close]

BLAST of Tan0012455 vs. ExPASy TrEMBL
Match: A0A0A0KCK3 (TPT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G055380 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 9.1e-35
Identity = 74/89 (83.15%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 19  VILLGVGVCTVTDVSVNTRGFIVAIIVIWSTSLQQYFVHFLQRKYSLSSLNLLGHTTPTQ 78
           V+LLGVGVCTVTDVSVNTRGF+ AII +WSTSLQQY+VHFLQRKYSLSS NLLGHT P Q
Sbjct: 137 VVLLGVGVCTVTDVSVNTRGFVAAIIAVWSTSLQQYYVHFLQRKYSLSSFNLLGHTAPAQ 196

Query: 79  VASLLLIGPFLDYWLTSTRVDQYDYNLAS 108
             SLL++GPFLDYWLT+ RVDQYDYNLAS
Sbjct: 197 AGSLLVVGPFLDYWLTTKRVDQYDYNLAS 225

[Close]

BLAST of Tan0012455 vs. ExPASy TrEMBL
Match: A0A6J1BY16 (UDP-rhamnose/UDP-galactose transporter 6 OS=Momordica charantia OX=3673 GN=LOC111006620 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 9.1e-35
Identity = 75/90 (83.33%), Postives = 81/90 (90.00%), Query Frame = 0


Query: 19  VILLGVGVCTVTDVSVNTRGFIVAIIVIWSTSLQQYFVHFLQRKYSLSSLNLLGHTTPTQ 78
           V+LLGVGVCTVTDVSVNTRGF+ A+I +WSTSLQQY+VHFLQRKYSLSS NLLGHT P Q
Sbjct: 137 VVLLGVGVCTVTDVSVNTRGFVAAVIAVWSTSLQQYYVHFLQRKYSLSSFNLLGHTAPAQ 196

Query: 79  VASLLLIGPFLDYWLTSTRVDQYDYNLASL 109
            ASLLLIGPFLDYWLT  RVDQYDYNL S+
Sbjct: 197 AASLLLIGPFLDYWLTVKRVDQYDYNLPSI 226

[Close]

BLAST of Tan0012455 vs. ExPASy TrEMBL
Match: A0A6J1JVX9 (UDP-rhamnose/UDP-galactose transporter 6-like OS=Cucurbita maxima OX=3661 GN=LOC111489350 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 1.2e-34
Identity = 75/89 (84.27%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 19  VILLGVGVCTVTDVSVNTRGFIVAIIVIWSTSLQQYFVHFLQRKYSLSSLNLLGHTTPTQ 78
           V+LLGVGVCTVTDVSVNTRGFI AII +WSTSLQQY+VHFLQRKYSLSS NLLGHT P Q
Sbjct: 137 VVLLGVGVCTVTDVSVNTRGFIAAIIAVWSTSLQQYYVHFLQRKYSLSSFNLLGHTAPAQ 196

Query: 79  VASLLLIGPFLDYWLTSTRVDQYDYNLAS 108
             SLLLIGPFLDYWLT+ R+DQY+YNLAS
Sbjct: 197 AGSLLLIGPFLDYWLTTKRIDQYNYNLAS 225

[Close]

BLAST of Tan0012455 vs. TAIR 10
Match: AT1G34020.1 (Nucleotide-sugar transporter family protein )

HSP 1 Score: 144.1 bits (362), Expect = 9.0e-35
Identity = 64/90 (71.11%), Postives = 79/90 (87.78%), Query Frame = 0


Query: 19  VILLGVGVCTVTDVSVNTRGFIVAIIVIWSTSLQQYFVHFLQRKYSLSSLNLLGHTTPTQ 78
           ++L+GVGVCTVTDVSVNT+GF+ A + +WST+LQQY+VH+LQRKYSL+S NLLGHT P Q
Sbjct: 137 LVLVGVGVCTVTDVSVNTKGFVAAFVAVWSTALQQYYVHYLQRKYSLNSFNLLGHTAPAQ 196

Query: 79  VASLLLIGPFLDYWLTSTRVDQYDYNLASL 109
            A+LL++GPFLDYWLT  RVD YDYNL S+
Sbjct: 197 AATLLVVGPFLDYWLTEKRVDMYDYNLVSV 226

[Close]

BLAST of Tan0012455 vs. TAIR 10
Match: AT4G09810.1 (Nucleotide-sugar transporter family protein )

HSP 1 Score: 143.3 bits (360), Expect = 1.5e-34
Identity = 64/90 (71.11%), Postives = 78/90 (86.67%), Query Frame = 0


Query: 19  VILLGVGVCTVTDVSVNTRGFIVAIIVIWSTSLQQYFVHFLQRKYSLSSLNLLGHTTPTQ 78
           ++L+GVGVCTVTDVSVNT+GF+ A + +WST+LQQY+VH+LQRKYSLSS NLLGHT P Q
Sbjct: 137 LVLVGVGVCTVTDVSVNTKGFVAAFVAVWSTALQQYYVHYLQRKYSLSSFNLLGHTAPAQ 196

Query: 79  VASLLLIGPFLDYWLTSTRVDQYDYNLASL 109
            A+LL++GPFLDYWLT  RVD YDYN  S+
Sbjct: 197 AATLLIVGPFLDYWLTDKRVDMYDYNSVSV 226

[Close]

BLAST of Tan0012455 vs. TAIR 10
Match: AT4G39390.1 (nucleotide sugar transporter-KT 1 )

HSP 1 Score: 131.3 bits (329), Expect = 6.1e-31
Identity = 61/90 (67.78%), Postives = 73/90 (81.11%), Query Frame = 0


Query: 19  VILLGVGVCTVTDVSVNTRGFIVAIIVIWSTSLQQYFVHFLQRKYSLSSLNLLGHTTPTQ 78
           ++L GV VCTVTDVSVN  GF+ A I +WST+LQQY+VH+LQRKYSL S NLL HT P Q
Sbjct: 142 LVLAGVAVCTVTDVSVNLNGFLAAAIAVWSTALQQYYVHYLQRKYSLGSFNLLAHTAPVQ 201

Query: 79  VASLLLIGPFLDYWLTSTRVDQYDYNLASL 109
            ASLLL+GPFLDYWLT+ RVD Y+++  SL
Sbjct: 202 AASLLLVGPFLDYWLTNQRVDAYNFSFVSL 231

[Close]

BLAST of Tan0012455 vs. TAIR 10
Match: AT4G39390.2 (nucleotide sugar transporter-KT 1 )

HSP 1 Score: 131.3 bits (329), Expect = 6.1e-31
Identity = 61/90 (67.78%), Postives = 73/90 (81.11%), Query Frame = 0


Query: 19  VILLGVGVCTVTDVSVNTRGFIVAIIVIWSTSLQQYFVHFLQRKYSLSSLNLLGHTTPTQ 78
           ++L GV VCTVTDVSVN  GF+ A I +WST+LQQY+VH+LQRKYSL S NLL HT P Q
Sbjct: 142 LVLAGVAVCTVTDVSVNLNGFLAAAIAVWSTALQQYYVHYLQRKYSLGSFNLLAHTAPVQ 201

Query: 79  VASLLLIGPFLDYWLTSTRVDQYDYNLASL 109
            ASLLL+GPFLDYWLT+ RVD Y+++  SL
Sbjct: 202 AASLLLVGPFLDYWLTNQRVDAYNFSFVSL 231

[Close]

BLAST of Tan0012455 vs. TAIR 10
Match: AT4G39390.3 (nucleotide sugar transporter-KT 1 )

HSP 1 Score: 131.3 bits (329), Expect = 6.1e-31
Identity = 61/90 (67.78%), Postives = 73/90 (81.11%), Query Frame = 0


Query: 19  VILLGVGVCTVTDVSVNTRGFIVAIIVIWSTSLQQYFVHFLQRKYSLSSLNLLGHTTPTQ 78
           ++L GV VCTVTDVSVN  GF+ A I +WST+LQQY+VH+LQRKYSL S NLL HT P Q
Sbjct: 138 LVLAGVAVCTVTDVSVNLNGFLAAAIAVWSTALQQYYVHYLQRKYSLGSFNLLAHTAPVQ 197

Query: 79  VASLLLIGPFLDYWLTSTRVDQYDYNLASL 109
            ASLLL+GPFLDYWLT+ RVD Y+++  SL
Sbjct: 198 AASLLLVGPFLDYWLTNQRVDAYNFSFVSL 227

The following BLAST results are available for this feature:

BLAST of Tan0012455 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FDZ5	1.3e-33	71.11	UDP-rhamnose/UDP-galactose transporter 6 OS=Arabidopsis thaliana OX=3702 GN=URGT...	[more]
Q9SZ96	2.2e-33	71.11	UDP-rhamnose/UDP-galactose transporter 5 OS=Arabidopsis thaliana OX=3702 GN=URGT...	[more]
Q8RWW7	8.5e-30	67.78	UDP-rhamnose/UDP-galactose transporter 4 OS=Arabidopsis thaliana OX=3702 GN=URGT...	[more]
Q9LPU2	4.9e-17	47.78	UDP-rhamnose/UDP-galactose transporter 2 OS=Arabidopsis thaliana OX=3702 GN=URGT...	[more]
Q9SRE4	1.4e-16	47.78	UDP-rhamnose/UDP-galactose transporter 1 OS=Arabidopsis thaliana OX=3702 GN=URGT...	[more]

BLAST of Tan0012455 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023535468.1	5.0e-35	86.52	UDP-rhamnose/UDP-galactose transporter 6-like [Cucurbita pepo subsp. pepo]	[more]
XP_022922419.1	5.0e-35	86.52	UDP-rhamnose/UDP-galactose transporter 6-like [Cucurbita moschata]	[more]
XP_022990401.1	5.0e-35	86.52	UDP-rhamnose/UDP-galactose transporter 6 [Cucurbita maxima] >KAG6602196.1 UDP-rh...	[more]
XP_022134335.1	1.9e-34	83.33	UDP-rhamnose/UDP-galactose transporter 6 [Momordica charantia]	[more]
XP_004140956.1	1.9e-34	83.15	UDP-rhamnose/UDP-galactose transporter 6 [Cucumis sativus] >KGN46117.1 hypotheti...	[more]

BLAST of Tan0012455 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JMU8	2.4e-35	86.52	UDP-rhamnose/UDP-galactose transporter 6 OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1E3B5	2.4e-35	86.52	UDP-rhamnose/UDP-galactose transporter 6-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A0A0KCK3	9.1e-35	83.15	TPT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G055380 PE=4 SV...	[more]
A0A6J1BY16	9.1e-35	83.33	UDP-rhamnose/UDP-galactose transporter 6 OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1JVX9	1.2e-34	84.27	UDP-rhamnose/UDP-galactose transporter 6-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of Tan0012455 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G34020.1	9.0e-35	71.11	Nucleotide-sugar transporter family protein	[more]
AT4G09810.1	1.5e-34	71.11	Nucleotide-sugar transporter family protein	[more]
AT4G39390.1	6.1e-31	67.78	nucleotide sugar transporter-KT 1	[more]
AT4G39390.2	6.1e-31	67.78	nucleotide sugar transporter-KT 1	[more]
AT4G39390.3	6.1e-31	67.78	nucleotide sugar transporter-KT 1	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11132:SF244	UDP-RHAMNOSE/UDP-GALACTOSE TRANSPORTER 5	coord: 18..109
None	No IPR available	PANTHER	PTHR11132	SOLUTE CARRIER FAMILY 35	coord: 18..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0012455.1	Tan0012455.1	mRNA
Tan0012455.2	Tan0012455.2	mRNA
Tan0012455.3	Tan0012455.3	mRNA
Tan0012455.4	Tan0012455.4	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0072334	UDP-galactose transmembrane transport
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015297	antiporter activity
molecular_function	GO:0005459	UDP-galactose transmembrane transporter activity