Tan0012434 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTAAAATATAATAATCTCTGATCACTGGCCGGATTCAGAACCCTGAACCCCCTGGTTCTGTTCCGCCGTCGGTTTCCCAATACCACCGCCTCAACCACCGTCCCCTATAAAAAAAACCCACTTGTCCATAATCGCCTCCTTCTCGATTTCACTTGCTGAATTTTCTTTTCCCCTAAAACAATGGCGGCTATGTCACCTCAGCCTTATCCTGTCGAGAAGAACATCGCCGGAGATCAAGAGGAGGCGGAGACGAAGGACCCAGATGTGACGAGGCATATTCTCTTGAAGTCTTCCCACTCCACCCAAGTACTGGAGAAACCGGTGGTACTGCGGCGGATCCGGCAGCGGAAGCGTGTTAACAAGTTCCGGGCGGTGGTGGGAGCTCTGTTCAGTTCGCCGTTCTCCGACAAAAGCGGCGACACTCGTCAGAGGAAATGGGTCGACGAACCCTTCACTTCGCTCTAAACCAATTCCAAATTTGTAAAATTCTTCCTTCTTTTTTTTTTTTTTTAATTTAGATTATGTTAGATGAATTTCAAAATCTCTATTAAACTATTTTTATCCAA TTAAAATATAATAATCTCTGATCACTGGCCGGATTCAGAACCCTGAACCCCCTGGTTCTGTTCCGCCGTCGGTTTCCCAATACCACCGCCTCAACCACCGTCCCCTATAAAAAAAACCCACTTGTCCATAATCGCCTCCTTCTCGATTTCACTTGCTGAATTTTCTTTTCCCCTAAAACAATGGCGGCTATGTCACCTCAGCCTTATCCTGTCGAGAAGAACATCGCCGGAGATCAAGAGGAGGCGGAGACGAAGGACCCAGATGTGACGAGGCATATTCTCTTGAAGTCTTCCCACTCCACCCAAGTACTGGAGAAACCGGTGGTACTGCGGCGGATCCGGCAGCGGAAGCGTGTTAACAAGTTCCGGGCGGTGGTGGGAGCTCTGTTCAGTTCGCCGTTCTCCGACAAAAGCGGCGACACTCGTCAGAGGAAATGGGTCGACGAACCCTTCACTTCGCTCTAAACCAATTCCAAATTTGTAAAATTCTTCCTTCTTTTTTTTTTTTTTTAATTTAGATTATGTTAGATGAATTTCAAAATCTCTATTAAACTATTTTTATCCAA ATGGCGGCTATGTCACCTCAGCCTTATCCTGTCGAGAAGAACATCGCCGGAGATCAAGAGGAGGCGGAGACGAAGGACCCAGATGTGACGAGGCATATTCTCTTGAAGTCTTCCCACTCCACCCAAGTACTGGAGAAACCGGTGGTACTGCGGCGGATCCGGCAGCGGAAGCGTGTTAACAAGTTCCGGGCGGTGGTGGGAGCTCTGTTCAGTTCGCCGTTCTCCGACAAAAGCGGCGACACTCGTCAGAGGAAATGGGTCGACGAACCCTTCACTTCGCTCTAA MAAMSPQPYPVEKNIAGDQEEAETKDPDVTRHILLKSSHSTQVLEKPVVLRRIRQRKRVNKFRAVVGALFSSPFSDKSGDTRQRKWVDEPFTSL Homology
BLAST of Tan0012434 vs. NCBI nr
Match: KAG6585633.1 (hypothetical protein SDJN03_18366, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020540.1 hypothetical protein SDJN02_17225, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 136.3 bits (342), Expect = 1.3e-28 Identity = 74/99 (74.75%), Postives = 80/99 (80.81%), Query Frame = 0
BLAST of Tan0012434 vs. NCBI nr
Match: KAG6598407.1 (hypothetical protein SDJN03_08185, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 135.6 bits (340), Expect = 2.3e-28 Identity = 75/103 (72.82%), Postives = 83/103 (80.58%), Query Frame = 0
BLAST of Tan0012434 vs. NCBI nr
Match: KAA0065270.1 (hypothetical protein E6C27_scaffold82G006120 [Cucumis melo var. makuwa]) HSP 1 Score: 132.5 bits (332), Expect = 1.9e-27 Identity = 73/103 (70.87%), Postives = 80/103 (77.67%), Query Frame = 0
BLAST of Tan0012434 vs. NCBI nr
Match: KGN62559.1 (hypothetical protein Csa_022598 [Cucumis sativus]) HSP 1 Score: 120.6 bits (301), Expect = 7.5e-24 Identity = 72/113 (63.72%), Postives = 78/113 (69.03%), Query Frame = 0
BLAST of Tan0012434 vs. NCBI nr
Match: KAG7029360.1 (Wall-associated receptor kinase-like 14, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 106.7 bits (265), Expect = 1.1e-19 Identity = 62/90 (68.89%), Postives = 70/90 (77.78%), Query Frame = 0
BLAST of Tan0012434 vs. ExPASy TrEMBL
Match: A0A5A7VDJ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006120 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 9.2e-28 Identity = 73/103 (70.87%), Postives = 80/103 (77.67%), Query Frame = 0
BLAST of Tan0012434 vs. ExPASy TrEMBL
Match: A0A0A0LNJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360760 PE=4 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 3.6e-24 Identity = 72/113 (63.72%), Postives = 78/113 (69.03%), Query Frame = 0
BLAST of Tan0012434 vs. ExPASy TrEMBL
Match: A0A2N9G0R5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20842 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.6e-11 Identity = 43/79 (54.43%), Postives = 55/79 (69.62%), Query Frame = 0
BLAST of Tan0012434 vs. ExPASy TrEMBL
Match: A0A5N6RR18 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_018466 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.7e-10 Identity = 39/80 (48.75%), Postives = 55/80 (68.75%), Query Frame = 0
BLAST of Tan0012434 vs. ExPASy TrEMBL
Match: A0A6A4LFT7 (Uncharacterized protein (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_10847 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.3e-10 Identity = 41/79 (51.90%), Postives = 53/79 (67.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|