Tan0012360 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAAAGCTTTCTCGCTCCCTCGTTTTCCTTGTCCTTGTTTTTTCAGGTTTGTTTTCCACACATCATTCTTTATGTTTGGTCGTCTCCGGCACTAGTTATTAAATTTTAACACTTCAAATTTCGCCAAACATTTCAAATAAAATAGCCACTAATGGTTAAAGATGATTTTTTTTTTCTCTCTCTCTTTCTCTATAAGGAAAGGCAATTCTTTTAAATTTTTAACTTTTCTCTTAGTATATGAATGTCAAATATGTTATGTAAAACATGTGAAATTTTGTACACAAAGATGCATCATTAAATTATAGTTTTATTAGCATATTTGAATGTTATTTGAGATATAAAATCCAACATGTCTATCAATAGGATTTGACCTCACCCATCAACAAAACTCAGTAACCATGATATGTGTAAATACGTGAATAAACAAATTAAAATGACACATTAGTTTTATATTTAAAACTAGCAACTTTTTAAAGGGAATGACTCAATTTATAATTTTAATACATCGAAAAGTAAAATTGAAACTTTTAAAAGGTTAAGAATTAAATAGAAAATTATCTCTAATATTAAAGACTTTATTATATCTCTTGAGACCATTTGGATTAACTTTTTTAAGTGCTTATTTTCTTAAGAAAATTATTTAATAGATTTTTAATATTTGACAACCACTCAAATTCAATTTGAGAAACAAGTTATTTTAGGTGCAACACTTAAACAAAATTTTAGACAAAGTCCTTTTAATTAAGTGTTTAAGTTAGAATTTCTCTCACGTTTTCACAGTATATTGAAATGACCAAAATACTCTCACATTACTGTCGCCACTATCGTGATCACGACATACTGTTCACAACAACTGCACACTCATTGTCGCCCACCATCTCTAGCGACTATAGTTGGTGACAACATTGGCCACCAATGCTAGTGACCATCGCAAACCCACCCTAGGTGACCACTAGTGATATTTCTAGCCAACTATTGCGTGTGATTACTCTGACGACCAACGACCAACAATCCCCTCCTACGGTAGTTGGTAATGTTTTGAATATAAATTTTAGTTTATTAGTTCGTAGTGTTTAATAGTCGTATTTTATAGTAACACTACTACAAAAACAAATTGTAAAATTATAATTTAACATCAGTTGAAGTATTTTGAGTGTAGAGCAAACAAAACAAATTGGTTTATAAAAATACTTTTAAGAAAACATAACCAAACAAAAGAATGTTATAATCTTAAACGATTTTTATAAAAGAAAAAAAAGAAGGTTTAAAATGCAATTTTCAAAAATAATTAAATTGAAAAATAATCCAATCCAGCCCTTAGTCTTCAATTTTAATTTTTCTTTTCAAATCACAACTCTGTATTTTTAAAAGGTGTTTTGAATTATGTTGTAACTTATGCTTTGAATAAATATATTATTAGTGCTTTATTTAATAACTATTTTGATTTTGGTTTTTTGTTTTTGAAAATTGGGTTTGTGTTCTCACCATTAATTTCTCTACAATATTTTCCATCTTTATTCACAAAACATTTAATTTTTAACCAAATTCAAAAAAAAAAAAAATATTGAAAACTTAGTTTGCTTTTTTAAAACATAAGTAAAAAATAGATAACAAAACAAAAAAACTTATAAGCGAAAGTAGTGTTTATAATTTTTATTTTCAAAAATCAAAAACTAAAAACCAAATGTTATCAAACAAAGTCTTAATCACTAAATTACATACCTCATTACTTTATGTTTGTTTTGAATATATTTTGGAGCTCGTTTTAATAATTAAATTTACCCTTAAGTATTATTTTAAATTGATTCAATCAAATTTCTACACGTAGTAGATTGAATAGAAAAATGATGACCTAACTTAAAATAATTTTGGAGAGTTGATATGATATTAAAAAATTTTGCAGTTGCATTGATGGTGCCTCAAACAAGCTACGCAAAGCAATGTGTTGAGAAGTTATATGAAATTATATGTGTAGCTGATGAATGTCATCAGAAGTGTCAAGAGAAGCACCCCAATTCATCATCTCAATGTCTTCCAGTTCTTCCAATTCCTCTAAACTATGTTTGCTATTGTACCTTCGATTGTCCGGCTTGA ATGGCAAAGCTTTCTCGCTCCCTCGTTTTCCTTGTCCTTGTTTTTTCAGTTGCATTGATGGTGCCTCAAACAAGCTACGCAAAGCAATGTGTTGAGAAGTTATATGAAATTATATGTGTAGCTGATGAATGTCATCAGAAGTGTCAAGAGAAGCACCCCAATTCATCATCTCAATGTCTTCCAGTTCTTCCAATTCCTCTAAACTATGTTTGCTATTGTACCTTCGATTGTCCGGCTTGA ATGGCAAAGCTTTCTCGCTCCCTCGTTTTCCTTGTCCTTGTTTTTTCAGTTGCATTGATGGTGCCTCAAACAAGCTACGCAAAGCAATGTGTTGAGAAGTTATATGAAATTATATGTGTAGCTGATGAATGTCATCAGAAGTGTCAAGAGAAGCACCCCAATTCATCATCTCAATGTCTTCCAGTTCTTCCAATTCCTCTAAACTATGTTTGCTATTGTACCTTCGATTGTCCGGCTTGA MAKLSRSLVFLVLVFSVALMVPQTSYAKQCVEKLYEIICVADECHQKCQEKHPNSSSQCLPVLPIPLNYVCYCTFDCPA Homology
BLAST of Tan0012360 vs. NCBI nr
Match: KGN52438.1 (hypothetical protein Csa_008032 [Cucumis sativus]) HSP 1 Score: 75.1 bits (183), Expect = 3.0e-10 Identity = 40/80 (50.00%), Postives = 57/80 (71.25%), Query Frame = 0
BLAST of Tan0012360 vs. NCBI nr
Match: XP_022923678.1 (putative defensin-like protein 129 [Cucurbita moschata]) HSP 1 Score: 73.2 bits (178), Expect = 1.2e-09 Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 0
BLAST of Tan0012360 vs. NCBI nr
Match: KGN52439.1 (hypothetical protein Csa_009048 [Cucumis sativus]) HSP 1 Score: 72.4 bits (176), Expect = 2.0e-09 Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 0
BLAST of Tan0012360 vs. NCBI nr
Match: XP_022990690.1 (putative defensin-like protein 129 [Cucurbita maxima]) HSP 1 Score: 71.6 bits (174), Expect = 3.4e-09 Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = 0
BLAST of Tan0012360 vs. NCBI nr
Match: KGN64987.1 (hypothetical protein Csa_022748 [Cucumis sativus]) HSP 1 Score: 59.7 bits (143), Expect = 1.3e-05 Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 0
BLAST of Tan0012360 vs. ExPASy TrEMBL
Match: A0A0A0KS76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G634340 PE=3 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 1.5e-10 Identity = 40/80 (50.00%), Postives = 57/80 (71.25%), Query Frame = 0
BLAST of Tan0012360 vs. ExPASy TrEMBL
Match: A0A6J1EAA9 (putative defensin-like protein 129 OS=Cucurbita moschata OX=3662 GN=LOC111431316 PE=3 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 5.6e-10 Identity = 36/78 (46.15%), Postives = 50/78 (64.10%), Query Frame = 0
BLAST of Tan0012360 vs. ExPASy TrEMBL
Match: A0A0A0KU45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G634350 PE=3 SV=1) HSP 1 Score: 72.4 bits (176), Expect = 9.5e-10 Identity = 38/80 (47.50%), Postives = 52/80 (65.00%), Query Frame = 0
BLAST of Tan0012360 vs. ExPASy TrEMBL
Match: A0A6J1JQS7 (putative defensin-like protein 129 OS=Cucurbita maxima OX=3661 GN=LOC111487504 PE=3 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.6e-09 Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = 0
BLAST of Tan0012360 vs. ExPASy TrEMBL
Match: A0A0A0LVZ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G172580 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 6.4e-06 Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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