Tan0012283 (gene) Snake gourd v1

Overview


Name	Tan0012283
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	60S ribosomal protein L29
Location	LG10: 59206300 .. 59207202 (+)
RNA-Seq Expression	Tan0012283
Synteny	Tan0012283

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCAATTTCCACAGCCCGTGAGTACCTTGGTCGTCTAAAATAGGCTCAACTTCCTTCCCTACGATTTACAGAGGCGGCAGAAACCCTAGCTTGCAGCATCCGCAGTATCTCTCAAGGTTTGCTTGATATCCTCTAGCTATTTTCCTCGCTCAAAACTTTTGATTCATCGATTTCTTTTCCATCCAAGATCGGTACAGCATTCGGTGTTTGCTGATTTCTATTTTTCTTTGGATTTTTTTGTTGGCGTTCTGTGGGTTAGAACAATGGCGAAGTCGAAGAATCACACGGCGCACAATCAATCCCGCAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACTAAAGGGGTACGAAATACATGAAAGGAATCAATTTTGCTCCTTCTGGATCGATTATTTTGTATTGAATGCTGTTTTTCAGTATAATTTTGATTATTTTCTGATATTGCTTCGTCGATATGTGTGTAGATGGACCCGAAATTCCTTAGGAACCAGAGGTACGCGAAGAAACACAACAACAAGAGTGGCGAAACAGCTACTGACGAAGAGTAAAGTAGAGCGCCATGAAACGGCAAGTTTAGGGTTTTTATGATATAAGTTTAATTTTCTATTGAACCTTTTGTGTTCTTTTTTGTTCAGTAGTAGTCAGCTTGTAATTTTGACTTTGTTGTAACGAGTTCCATTTCAATGTGGAAACCGTTGCTTCTTAGGCCTGGCTACGAAAAAACATTACCTGATTTGCATGTTTAAGGTTTCAACTATTGGTTACATCTCCATACATTATCATTTGTGCCATTGATATCTTCAATTCACTCTTATTAGCTAAGGCATTATCATCTCTCTTTGTTCTCCTCTCTTACTACAACTGCATAAGACAGAATGTTTTT

mRNA sequence

CCAATTTCCACAGCCCGTGAGTACCTTGGTCGTCTAAAATAGGCTCAACTTCCTTCCCTACGATTTACAGAGGCGGCAGAAACCCTAGCTTGCAGCATCCGCAGTATCTCTCAAGAACAATGGCGAAGTCGAAGAATCACACGGCGCACAATCAATCCCGCAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACTAAAGGGATGGACCCGAAATTCCTTAGGAACCAGAGGTACGCGAAGAAACACAACAACAAGAGTGGCGAAACAGCTACTGACGAAGAGTAAAGTAGAGCGCCATGAAACGGCAAGTTTAGGGTTTTTATGATATAAGTTTAATTTTCTATTGAACCTTTTGTGTTCTTTTTTGTTCAGTAGTAGTCAGCTTGTAATTTTGACTTTGTTGTAACGAGTTCCATTTCAATGTGGAAACCGTTGCTTCTTAGGCCTGGCTACGAAAAAACATTACCTGATTTGCATGTTTAAGGTTTCAACTATTGGTTACATCTCCATACATTATCATTTGTGCCATTGATATCTTCAATTCACTCTTATTAGCTAAGGCATTATCATCTCTCTTTGTTCTCCTCTCTTACTACAACTGCATAAGACAGAATGTTTTT

Coding sequence (CDS)

ATGGCGAAGTCGAAGAATCACACGGCGCACAATCAATCCCGCAAAGCCCATAAGAACGGCATCAAGAAACCAAGGAAGCACCGCCACACTTCCACTAAAGGGATGGACCCGAAATTCCTTAGGAACCAGAGGTACGCGAAGAAACACAACAACAAGAGTGGCGAAACAGCTACTGACGAAGAGTAA

Protein sequence

MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDEE

Homology

[Close]

BLAST of Tan0012283 vs. ExPASy Swiss-Prot
Match: Q9M7X7 (60S ribosomal protein L29-1 OS=Arabidopsis thaliana OX=3702 GN=RPL29A PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 4.0e-21
Identity = 51/61 (83.61%), Postives = 56/61 (91.80%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE A+ E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Tan0012283 vs. ExPASy Swiss-Prot
Match: Q84WM0 (60S ribosomal protein L29-2 OS=Arabidopsis thaliana OX=3702 GN=RPL29B PE=3 SV=2)

HSP 1 Score: 100.9 bits (250), Expect = 5.2e-21
Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE A  E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKSGENAGVE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Tan0012283 vs. ExPASy Swiss-Prot
Match: Q58DW3 (60S ribosomal protein L29 OS=Bos taurus OX=9913 GN=RPL29 PE=2 SV=3)

HSP 1 Score: 79.3 bits (194), Expect = 1.6e-14
Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK 53
          MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Sbjct: 1  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52

[Close]

BLAST of Tan0012283 vs. ExPASy Swiss-Prot
Match: P47914 (60S ribosomal protein L29 OS=Homo sapiens OX=9606 GN=RPL29 PE=1 SV=2)

HSP 1 Score: 79.3 bits (194), Expect = 1.6e-14
Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK 53
          MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Sbjct: 1  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52

[Close]

BLAST of Tan0012283 vs. ExPASy Swiss-Prot
Match: Q8HXB8 (60S ribosomal protein L29 OS=Macaca fascicularis OX=9541 GN=RPL29 PE=2 SV=3)

HSP 1 Score: 79.3 bits (194), Expect = 1.6e-14
Identity = 40/52 (76.92%), Postives = 44/52 (84.62%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNK 53
          MAKSKNHT HNQSRK H+NGIKKPR  R+ S KG+DPKFLRN R+AKKHN K
Sbjct: 1  MAKSKNHTTHNQSRKWHRNGIKKPRSQRYESLKGVDPKFLRNMRFAKKHNKK 52

[Close]

BLAST of Tan0012283 vs. NCBI nr
Match: XP_038875325.1 (60S ribosomal protein L29-1-like [Benincasa hispida])

HSP 1 Score: 117.1 bits (292), Expect = 5.4e-23
Identity = 59/61 (96.72%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDE 60
          MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETA++E
Sbjct: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Tan0012283 vs. NCBI nr
Match: XP_023000055.1 (60S ribosomal protein L29-1 [Cucurbita maxima] >XP_023514069.1 60S ribosomal protein L29-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 115.9 bits (289), Expect = 1.2e-22
Identity = 58/61 (95.08%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDE 60
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETA++E
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Tan0012283 vs. NCBI nr
Match: XP_038875270.1 (60S ribosomal protein L29-1 [Benincasa hispida])

HSP 1 Score: 115.2 bits (287), Expect = 2.0e-22
Identity = 58/61 (95.08%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDE 60
          MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE A++E
Sbjct: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGENASEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Tan0012283 vs. NCBI nr
Match: XP_022930218.1 (60S ribosomal protein L29-1 [Cucurbita moschata] >KAG7026348.1 60S ribosomal protein L29-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 114.4 bits (285), Expect = 3.5e-22
Identity = 57/60 (95.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDE 60
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETA++E
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60

[Close]

BLAST of Tan0012283 vs. NCBI nr
Match: XP_023000056.1 (60S ribosomal protein L29-1-like [Cucurbita maxima] >KAG7026347.1 60S ribosomal protein L29-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 114.4 bits (285), Expect = 3.5e-22
Identity = 57/61 (93.44%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDE 60
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE+ T+E
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Tan0012283 vs. ExPASy TrEMBL
Match: A0A6J1KHA4 (60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111494362 PE=3 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 5.8e-23
Identity = 58/61 (95.08%), Postives = 61/61 (100.00%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDE 60
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETA++E
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Tan0012283 vs. ExPASy TrEMBL
Match: A0A6J1L4P4 (60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111499112 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.7e-22
Identity = 57/61 (93.44%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDE 60
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGET ++E
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Tan0012283 vs. ExPASy TrEMBL
Match: A0A6J1H4N3 (60S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111460442 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.7e-22
Identity = 57/61 (93.44%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDE 60
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGET ++E
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETGSEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Tan0012283 vs. ExPASy TrEMBL
Match: A0A6J1KET9 (60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111494363 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.7e-22
Identity = 57/61 (93.44%), Postives = 60/61 (98.36%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDE 60
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGE+ T+E
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGESGTEE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Tan0012283 vs. ExPASy TrEMBL
Match: A0A6J1EUF7 (60S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111436738 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.7e-22
Identity = 57/60 (95.00%), Postives = 60/60 (100.00%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDE 60
          MAKSKNHTAHNQSRKAH+NGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETA++E
Sbjct: 1  MAKSKNHTAHNQSRKAHRNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETASEE 60

[Close]

BLAST of Tan0012283 vs. TAIR 10
Match: AT3G06700.1 (Ribosomal L29e protein family )

HSP 1 Score: 101.3 bits (251), Expect = 2.8e-22
Identity = 51/61 (83.61%), Postives = 56/61 (91.80%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE A+ E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Tan0012283 vs. TAIR 10
Match: AT3G06700.2 (Ribosomal L29e protein family )

HSP 1 Score: 101.3 bits (251), Expect = 2.8e-22
Identity = 51/61 (83.61%), Postives = 56/61 (91.80%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE A+ E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Tan0012283 vs. TAIR 10
Match: AT3G06700.3 (Ribosomal L29e protein family )

HSP 1 Score: 101.3 bits (251), Expect = 2.8e-22
Identity = 51/61 (83.61%), Postives = 56/61 (91.80%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN K+GE A+ E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKAGENASAE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

[Close]

BLAST of Tan0012283 vs. TAIR 10
Match: AT3G06680.1 (Ribosomal L29e protein family )

HSP 1 Score: 100.9 bits (250), Expect = 3.7e-22
Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE A  E
Sbjct: 23 MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKSGENAGVE 82

Query: 61 E 62
          E
Sbjct: 83 E 83

[Close]

BLAST of Tan0012283 vs. TAIR 10
Match: AT3G06680.2 (Ribosomal L29e protein family )

HSP 1 Score: 100.9 bits (250), Expect = 3.7e-22
Identity = 52/61 (85.25%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 1  MAKSKNHTAHNQSRKAHKNGIKKPRKHRHTSTKGMDPKFLRNQRYAKKHNNKSGETATDE 60
          MAKSKNHTAHNQS KAHKNGIKKPR+HRHT T+GMDPKFLRNQRYA+KHN KSGE A  E
Sbjct: 1  MAKSKNHTAHNQSAKAHKNGIKKPRRHRHTPTRGMDPKFLRNQRYARKHNVKSGENAGVE 60

Query: 61 E 62
          E
Sbjct: 61 E 61

The following BLAST results are available for this feature:

BLAST of Tan0012283 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M7X7	4.0e-21	83.61	60S ribosomal protein L29-1 OS=Arabidopsis thaliana OX=3702 GN=RPL29A PE=1 SV=1	[more]
Q84WM0	5.2e-21	85.25	60S ribosomal protein L29-2 OS=Arabidopsis thaliana OX=3702 GN=RPL29B PE=3 SV=2	[more]
Q58DW3	1.6e-14	76.92	60S ribosomal protein L29 OS=Bos taurus OX=9913 GN=RPL29 PE=2 SV=3	[more]
P47914	1.6e-14	76.92	60S ribosomal protein L29 OS=Homo sapiens OX=9606 GN=RPL29 PE=1 SV=2	[more]
Q8HXB8	1.6e-14	76.92	60S ribosomal protein L29 OS=Macaca fascicularis OX=9541 GN=RPL29 PE=2 SV=3	[more]

BLAST of Tan0012283 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875325.1	5.4e-23	96.72	60S ribosomal protein L29-1-like [Benincasa hispida]	[more]
XP_023000055.1	1.2e-22	95.08	60S ribosomal protein L29-1 [Cucurbita maxima] >XP_023514069.1 60S ribosomal pro...	[more]
XP_038875270.1	2.0e-22	95.08	60S ribosomal protein L29-1 [Benincasa hispida]	[more]
XP_022930218.1	3.5e-22	95.00	60S ribosomal protein L29-1 [Cucurbita moschata] >KAG7026348.1 60S ribosomal pro...	[more]
XP_023000056.1	3.5e-22	93.44	60S ribosomal protein L29-1-like [Cucurbita maxima] >KAG7026347.1 60S ribosomal ...	[more]

BLAST of Tan0012283 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KHA4	5.8e-23	95.08	60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111494362 PE=3 SV=1	[more]
A0A6J1L4P4	1.7e-22	93.44	60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111499112 PE=3 SV=1	[more]
A0A6J1H4N3	1.7e-22	93.44	60S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111460442 PE=3 SV=...	[more]
A0A6J1KET9	1.7e-22	93.44	60S ribosomal protein L29 OS=Cucurbita maxima OX=3661 GN=LOC111494363 PE=3 SV=1	[more]
A0A6J1EUF7	1.7e-22	95.00	60S ribosomal protein L29 OS=Cucurbita moschata OX=3662 GN=LOC111436738 PE=3 SV=...	[more]

BLAST of Tan0012283 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G06700.1	2.8e-22	83.61	Ribosomal L29e protein family	[more]
AT3G06700.2	2.8e-22	83.61	Ribosomal L29e protein family	[more]
AT3G06700.3	2.8e-22	83.61	Ribosomal L29e protein family	[more]
AT3G06680.1	3.7e-22	85.25	Ribosomal L29e protein family	[more]
AT3G06680.2	3.7e-22	85.25	Ribosomal L29e protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002673	Ribosomal protein L29e	PFAM	PF01779	Ribosomal_L29e	coord: 3..42 e-value: 3.5E-23 score: 81.6
IPR002673	Ribosomal protein L29e	PANTHER	PTHR12884	60S RIBOSOMAL PROTEIN L29	coord: 1..61
None	No IPR available	GENE3D	6.10.140.1730		coord: 1..61 e-value: 3.1E-30 score: 106.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR12884:SF30	60S RIBOSOMAL PROTEIN L29	coord: 1..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0012283.1	Tan0012283.1	mRNA
Tan0012283.2	Tan0012283.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome