Tan0012256 (gene) Snake gourd v1

Overview


Name	Tan0012256
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	exonuclease V, chloroplastic
Location	LG05: 2088043 .. 2092953 (+)
RNA-Seq Expression	Tan0012256
Synteny	Tan0012256

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATCACAGAAAAGATTTAAATTATTAAATTTCCATTCAAAACGATGCGTTTCTTAATCCTAAGGTAACAAAGAAGGACCAACTTCATTGTTTCCGCCTTTTCTCCTTTGCCTTTTTGAAGAAGCTTTTAAATCCTCAAAACTAAACTACATGGCGATTGCAACGGTAACTGCTCCACGATCCCCAACTCACCTCATTGGGTCGTCCAAAAATGGCGGATTCACGTTCTGGGTTGCCGCCATTTAACGACGATGAAAATACCCACGAAGGCGTTCCAGAGATCCCGGTTGAGATTGTGAGCGACGAGGAAATGGCCCTAATCGAAGCTGCCTTGGCCGCTGCCGTCGGCACTGCTCGATCTTCAAGCTCCGCTATTCATTCCCCTTCTTGTTCTTCTCAGAATCTCTTCAACACCAGGTCTATTCACTCTATTACCCTCCTATCCAAGAGGGGCCTCTCTTCTTCCCAGCCAGATATTGAGGATTTGTGCAAAAGTTCGAGTACCCAGAAGAAGATCAAAGTCAACGAATCGCTTCTGCAACGTTTTAGGAGGAACAAGGGCTTGGCTGTCACTGATATTACTCGCACGGTATGGAGTTCTTTTTTGGTTTTCATTGGTTTAGTTTGATTTATGTGGATGGTTTGGAGTTTTCTTCTGCTTATTACGATCATCAAATTATTTCTGTCTATTGGCCATTTACATATTCGTGTCAATACTCAAACTTAGGCTTTTGTACTCTTAATTTAATTGGATAATTGGATTAAATCTTGAACTTGAATGACTGTTGCAATTCATGTGACTTCTCAAAAGTAAATTAGAAAATTGTTCACGAACCAATAATTGATTAAACAAAATTCAAAACAGAATACTAAACAGAATACCCAAAATCATGTCACAACGATACCTAAACCTAATTGTGATTTGTGAAAATACTCAATCTAGCAAAAAATGAAGTAGATAAAATACGCTCAAACTTAGCAACAACATACTCAAATTCAAACTCGAACTCAAACTTGACAATATTCTTTTCAATGCTTTGTCTTGGTGTAAATTGGACCTGCACTTCTACTCTTATAATCTTTCCTCTCTTTTGTGTAATTGAAGATGTTTAATACAATTCTTTTGTTTCCTCCTTTTTATAAATTTCCTACATTAATGACATTGTTTCTTATAAAAAATAAAAATATCCAACGATGGAAAAAAGAAGAAGAAGAAAGTCTTGTTCGACCACAAGGCTTATCACTATTTCTTTTTTCAATGGAGACTTATTTACTCGAGGGTATAAATTACACTACTAATTCAAGTGCAGTGCTTAAATTTCCGAACTTAAAGTGTAGGGTTTAAAGGGATGAAATTGAAAGTTCAAATTTTCTTTAATCACCCAAATACAAGGGTAAAGATTGAACTTTTTCTAATTTATGATTACGTCTCTAATGACAGTGAAACAGGAATCACTTGTGTGTGGATGAGTTTTGCGAAGTATATAGCAAAAGTATTTTATAACTTTAGGAAAGAAACACTTGATGACAAATCAATTTGTTTCTGTACTCTTGAAAGTACATTTTTTTTTTAAAAACTCTTTTATGCTATACTTGTTGAGGATCTCACATTGAAAATTTGGAGAGAAACCTTATAACTTATAAGATACATGAACTGCTCCTCTTATTGCCAATTGGTTTTGAGATGGAACTCTAAATAATTTAATATGGTATTAAAGCCATAAAATCTAAACGGGTATTTCGGTCCAAAAAATTAAAATTGAGATTCGATCCAAGAATGGTAAACCCAAACAGGCACCATCTCGAGGTGACATGTTGAGGATCCCACATTGGAAAGGTAATTGGTTTTGAAATTGAACTTCATAAAATCTAATAATATTCATGACAATTTTGAGTAGAAAGTGCTTACACATTTCCAAGCATAGCCTAAAGCTGCAGCCGATTATTGATTTGAACTGGGAGAATTATCTGCCGGTTATGCTTATTTTGTTTTGGTCATACAAGGGACTCTTGAAGTATCAAAAGATAATATTTTCTTGCATTAATCTGATTTTCTCGTCTTTTTAAGGGGTGGAAAGTTTACGTACTTATCTCCTGACATGGCATCTGCAGGAATGGTGTGAAAAACAGATGGAGTTTTATCTCTTTTTTGGAGCACGGAGAAAAACCAAAGCTATGGAAGCAGGTATTGCACGCCATGCAATGCTTGAAGCGGAGGTAATCTTAGTTTTCATATTGCACTCATTCCTTTTCTACATGTTCTTTAGTATAGTCGTTTCTTACTTCTAGTATAAAAATTGTCTTACCCAACAAAAACTTTTAGCATCTAAATGGCTTTTGTACCACATGTTGTGATGCTTGAATCATATATCACATATATGTCCTTGTTAGGACTGAGTTTTTGGTGCTAGTTCCCTAGCTCACGTCTTTCGACTAAATCCATTGGATAGTTGCCTAATCCTATAATATCTGGTGTCAAGTATCTGGCTATCAGAACTTGCTAATATTATTTTGAGTAATCTTGGATAATTTAGAAGTTAGGCTGTATTAACATGAACGGAGTTAATTGTTATATTCTCCTCTTTACCACCTTTAATTGGTACTCTATTTGAATCCTCGTAGGTTGTTAAAAAAGTTAAAGTTCAGGTGAAATCAGCTGAAGATAGATGGGCTCTGAAGCTTATTAATTTCACATTTGGTGTAAACCAACTACTGTTTGAAGGGTTGACTCGTGAGCTGCCTGTGTAAGTCCCAATTTTTGTGTCCGAGTGTCCCAAATCATTATTGTTTGTCCATCAGCCGACTTTCTAGTTACACTCATAAAACATTATGCCTTGTGATTGAACAATTCTGTGACACATGAGGGACATCAAAGTTGGATTCCCCGGAATGAATAGGGGAATGATTTGTATGATGAAACAAATTCTATTCTGCTCTTCTTTTGCAAGTTTCTTGACATATTATGATATCAATTACTCTCAAGTGTCATTATTCGTACTATGCCCTATACATTAATCTTATGAACGAAGTGAAAAATGCTTCAATTTTAGCATTATCTTGGGATGTCAGAAAATGAGTTTAATTCAGTAATGTGAAAATGGATGGTGCTTACACTGTTACTGCCTGTCATATGGCATTTGTTTCCCTGTTTCGAGATGAGCATTTTACGTTTTTCATCATTTTGAAAATTTTATTCTATTTTGCTTCCCTTTTATTTTCAGCTATCTGCTACTGTTATCTGTTCTTGTACACACGACTTAAAGCTATTATTAGAATTATTTCTCTTTCTTGGATTTCCATTTCTCTCAATCTCACTGCAGCTATGTTTGCATCAGAATGGGTTTGGTAGATGGTATTTGGATGGTTGGTGTGATTGATGAGCTTCAGATGTTGGAGATCGACTCCGGTAAAATACCGATGTTGGTAGACACAAAAACCCGTATGCGGGATACAATTCCAGCTGAACCACAACGAAGAAATGGGAAGTATGTAATCATGGTTGTTTGTTTAAGCTAGTTCAATGTTCATCTGTTGATTGCAAACAATGCTGACTTAACTACATTCATTATGTTTGCAGGCTTCAATTAATGTGTTATAAGTACTTATTGGACAGTCTAACTTCTGATGGCTTCTCTTCCAGACAATTTTTTGATTTCTTTTCTTTGAATCCTTATTCCATCTTGTCTGAGGAAATCTCGGACAGCACTACTCCATTTGGTTTCACTGCAAAGGTAGAGGTTTTAACTTCTGCTTGTTTTTCCAAAAGAAAAAAAGAGTATAGTAAAAAGGAAAATGATACCTACTTCACACTTTGAAAATAGAAAATAGAAAACAGAAAACAGAAAACAAAATGATTATCTTACGAGGGCTTTGAAATATTTGACATAAATCAGAGTTTGTTTTCAAGTTCTCGCCATGATAGATTTTCTTTGTGAAGTGTCAACATAATATTAGGGAGTTCTGGAAGAAACTCACCCTCTGCAAATTCTTGTGGTTTCTTTTTTTTTTTTTTTCCTGATCTTGTCTATACAGACTCTCGATGATGTAGTGAGATACTATGTAAATTGTTGTAGCATGCTGCCTCTGACTCACAATCAACTCTTACTAAGGTACATAACATTTAAACTTTTATGTATAAATGTCTCATCAAAAAACATTTATAGAAAGTTTATGATTTCCTCCAATAGTTGTGCTTGATTAGCAATACTGTTCCTTCTTGCTCTAACCAATGCTCGTGCGTTGCAATTTGAAAACTGAAGCTTCATTATGCAACATTTTCATTGTGATTTGTGCAATATTTGTTTCTGAGCAATATTTCAGTTCCGATATTGATATGGTTGATTGTTATAGTACATACATGAATCACAAAAGAATCAGTCTATTTTCTATTTAATAATGATGTTTGTGGTACTTGTTTCTGAGCTGTATATGAGTTCTGATAAGATATGGTTGATTGTTATGGTGCCAGATATGAATCACAAAAGGATCAGTCTATTATTGTTGAAGATGAATTTGCATATGATCATGATTGGCTCAAGAGTCAACTCGAGACCTCATTCCAGGTCTGGCGTGGACAGCGAGAACCCGAATGTACTCCTCAGGAAGAACGATGGAAATGTCGACATTGCGAATTTGCTCCGGATTGCCCTGCAAATGCTAACCTCGATGAAACTAGAAAGGCCGAGTAATTCAACTCGAAAATACTCGGGTTTGGTCTCTCCTGCCAACTAACAAGATTATCTTCTTTAAGTGTATGGTTCATATTCTCACCCTTCCCCTCAGAAGCTGTAGTTTTATATAAGCTTCTTGTGATTATCTTACAACAGATATATATCAATTTGTATTGAGCATGTATTTACTTATGGTGCAAAATTGCACCTGTTAGAAACAGGATGTGTATGTGTTGGAGTG

mRNA sequence

TTATCACAGAAAAGATTTAAATTATTAAATTTCCATTCAAAACGATGCGTTTCTTAATCCTAAGGTAACAAAGAAGGACCAACTTCATTGTTTCCGCCTTTTCTCCTTTGCCTTTTTGAAGAAGCTTTTAAATCCTCAAAACTAAACTACATGGCGATTGCAACGGTAACTGCTCCACGATCCCCAACTCACCTCATTGGGTCGTCCAAAAATGGCGGATTCACGTTCTGGGTTGCCGCCATTTAACGACGATGAAAATACCCACGAAGGCGTTCCAGAGATCCCGGTTGAGATTGTGAGCGACGAGGAAATGGCCCTAATCGAAGCTGCCTTGGCCGCTGCCGTCGGCACTGCTCGATCTTCAAGCTCCGCTATTCATTCCCCTTCTTGTTCTTCTCAGAATCTCTTCAACACCAGGTCTATTCACTCTATTACCCTCCTATCCAAGAGGGGCCTCTCTTCTTCCCAGCCAGATATTGAGGATTTGTGCAAAAGTTCGAGTACCCAGAAGAAGATCAAAGTCAACGAATCGCTTCTGCAACGTTTTAGGAGGAACAAGGGCTTGGCTGTCACTGATATTACTCGCACGGAATGGTGTGAAAAACAGATGGAGTTTTATCTCTTTTTTGGAGCACGGAGAAAAACCAAAGCTATGGAAGCAGGTATTGCACGCCATGCAATGCTTGAAGCGGAGGTTGTTAAAAAAGTTAAAGTTCAGGTGAAATCAGCTGAAGATAGATGGGCTCTGAAGCTTATTAATTTCACATTTGGTGTAAACCAACTACTGTTTGAAGGGTTGACTCGTGAGCTGCCTGTAATGGGTTTGGTAGATGGTATTTGGATGGTTGGTGTGATTGATGAGCTTCAGATGTTGGAGATCGACTCCGGTAAAATACCGATGTTGGTAGACACAAAAACCCGTATGCGGGATACAATTCCAGCTGAACCACAACGAAGAAATGGGAAGCTTCAATTAATGTGTTATAAGTACTTATTGGACAGTCTAACTTCTGATGGCTTCTCTTCCAGACAATTTTTTGATTTCTTTTCTTTGAATCCTTATTCCATCTTGTCTGAGGAAATCTCGGACAGCACTACTCCATTTGGTTTCACTGCAAAGACTCTCGATGATGTAGTGAGATACTATGTAAATTGTTGTAGCATGCTGCCTCTGACTCACAATCAACTCTTACTAAGATATGAATCACAAAAGGATCAGTCTATTATTGTTGAAGATGAATTTGCATATGATCATGATTGGCTCAAGAGTCAACTCGAGACCTCATTCCAGGTCTGGCGTGGACAGCGAGAACCCGAATGTACTCCTCAGGAAGAACGATGGAAATGTCGACATTGCGAATTTGCTCCGGATTGCCCTGCAAATGCTAACCTCGATGAAACTAGAAAGGCCGAGTAATTCAACTCGAAAATACTCGGGTTTGGTCTCTCCTGCCAACTAACAAGATTATCTTCTTTAAGTGTATGGTTCATATTCTCACCCTTCCCCTCAGAAGCTGTAGTTTTATATAAGCTTCTTGTGATTATCTTACAACAGATATATATCAATTTGTATTGAGCATGTATTTACTTATGGTGCAAAATTGCACCTGTTAGAAACAGGATGTGTATGTGTTGGAGTG

Coding sequence (CDS)

ATGGCGGATTCACGTTCTGGGTTGCCGCCATTTAACGACGATGAAAATACCCACGAAGGCGTTCCAGAGATCCCGGTTGAGATTGTGAGCGACGAGGAAATGGCCCTAATCGAAGCTGCCTTGGCCGCTGCCGTCGGCACTGCTCGATCTTCAAGCTCCGCTATTCATTCCCCTTCTTGTTCTTCTCAGAATCTCTTCAACACCAGGTCTATTCACTCTATTACCCTCCTATCCAAGAGGGGCCTCTCTTCTTCCCAGCCAGATATTGAGGATTTGTGCAAAAGTTCGAGTACCCAGAAGAAGATCAAAGTCAACGAATCGCTTCTGCAACGTTTTAGGAGGAACAAGGGCTTGGCTGTCACTGATATTACTCGCACGGAATGGTGTGAAAAACAGATGGAGTTTTATCTCTTTTTTGGAGCACGGAGAAAAACCAAAGCTATGGAAGCAGGTATTGCACGCCATGCAATGCTTGAAGCGGAGGTTGTTAAAAAAGTTAAAGTTCAGGTGAAATCAGCTGAAGATAGATGGGCTCTGAAGCTTATTAATTTCACATTTGGTGTAAACCAACTACTGTTTGAAGGGTTGACTCGTGAGCTGCCTGTAATGGGTTTGGTAGATGGTATTTGGATGGTTGGTGTGATTGATGAGCTTCAGATGTTGGAGATCGACTCCGGTAAAATACCGATGTTGGTAGACACAAAAACCCGTATGCGGGATACAATTCCAGCTGAACCACAACGAAGAAATGGGAAGCTTCAATTAATGTGTTATAAGTACTTATTGGACAGTCTAACTTCTGATGGCTTCTCTTCCAGACAATTTTTTGATTTCTTTTCTTTGAATCCTTATTCCATCTTGTCTGAGGAAATCTCGGACAGCACTACTCCATTTGGTTTCACTGCAAAGACTCTCGATGATGTAGTGAGATACTATGTAAATTGTTGTAGCATGCTGCCTCTGACTCACAATCAACTCTTACTAAGATATGAATCACAAAAGGATCAGTCTATTATTGTTGAAGATGAATTTGCATATGATCATGATTGGCTCAAGAGTCAACTCGAGACCTCATTCCAGGTCTGGCGTGGACAGCGAGAACCCGAATGTACTCCTCAGGAAGAACGATGGAAATGTCGACATTGCGAATTTGCTCCGGATTGCCCTGCAAATGCTAACCTCGATGAAACTAGAAAGGCCGAGTAA

Protein sequence

MADSRSGLPPFNDDENTHEGVPEIPVEIVSDEEMALIEAALAAAVGTARSSSSAIHSPSCSSQNLFNTRSIHSITLLSKRGLSSSQPDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAVTDITRTEWCEKQMEFYLFFGARRKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDRWALKLINFTFGVNQLLFEGLTRELPVMGLVDGIWMVGVIDELQMLEIDSGKIPMLVDTKTRMRDTIPAEPQRRNGKLQLMCYKYLLDSLTSDGFSSRQFFDFFSLNPYSILSEEISDSTTPFGFTAKTLDDVVRYYVNCCSMLPLTHNQLLLRYESQKDQSIIVEDEFAYDHDWLKSQLETSFQVWRGQREPECTPQEERWKCRHCEFAPDCPANANLDETRKAE

Homology

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BLAST of Tan0012256 vs. ExPASy Swiss-Prot
Match: Q9FKK6 (Exonuclease V, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g60370 PE=2 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 6.8e-101
Identity = 203/394 (51.52%), Postives = 267/394 (67.77%), Query Frame = 0


Query: 4   SRSGLPPFNDDENTHEGVPEIPVEIVSDEEMALIEAALAAAVGTARSSSSAIHSPSCSSQ 63
           ++SG    +  ++ H   PEIP+EIVS+EEMA+++AALAA+     S   ++ SPS  + 
Sbjct: 22  AQSGTVSISSPQSHHVVFPEIPIEIVSEEEMAILDAALAASRSILPSVIRSV-SPSRITA 81

Query: 64  NLFNTRSIHSITLLSKRGLSSSQPDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAVTDI 123
              + ++I SITL SKR LS+   DIE               ES L RFRRN+ L VTD+
Sbjct: 82  G-GSPKTIRSITLFSKRKLSACS-DIE---------------ESYLHRFRRNQALGVTDL 141

Query: 124 TRTEWCEKQMEFYLFFGARRKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDRWALKLIN 183
           T TEWCEKQME  L FG R+  KAM+ G ARH  LE EVVKKV+V+V+S ED+WALKL+N
Sbjct: 142 TGTEWCEKQMENVLCFGRRKVNKAMKVGQARHLQLEEEVVKKVRVKVESNEDKWALKLLN 201

Query: 184 FTFGVNQLLFEGLTRELPVMGLVDGIWMVGVIDELQ--MLEIDSGKIPMLVDTKTRMRDT 243
              GVNQ LFEG TREL ++G V G W+VG+IDEL+    E  S   P+L+DTKTR+RDT
Sbjct: 202 SIAGVNQFLFEGRTRELLLLGFVGGQWIVGIIDELRKAYAEESSDSGPILIDTKTRLRDT 261

Query: 244 IPAEPQRRNGKLQLMCYKYLLDSLTSDGFSSRQFFDFFSLNPYSILSEEISDSTTPFGFT 303
           +PAEPQRRNG+LQLM YK L D++  +GF +  FFD+FSLN   +LS+++ D     G  
Sbjct: 262 LPAEPQRRNGRLQLMLYKLLWDTIVKEGFPTGPFFDYFSLNRNYVLSQDVRDHIANAGIK 321

Query: 304 AKTLDDVVRYYVNCCSMLPLTHNQLLLRYESQKDQSIIVEDEFAYDHDWLKSQLETSFQV 363
           A+TL+++VRYY N   MLP+ +NQLLL+YE QKDQSII E  F +DH+W+ S+     + 
Sbjct: 322 AQTLEEIVRYYENTFQMLPIANNQLLLKYEFQKDQSIIAEIRFNHDHEWVMSKYREVIEF 381

Query: 364 WRGQREPECTPQEERWKCRHCEFAPDCPANANLD 396
           WR +RE   TP+EERWKCR+C+FA  CP N + +
Sbjct: 382 WRNEREAGYTPEEERWKCRYCQFAKSCPGNPSFE 397

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BLAST of Tan0012256 vs. ExPASy Swiss-Prot
Match: A2VDX7 (Exonuclease V OS=Bos taurus OX=9913 GN=EXO5 PE=2 SV=2)

HSP 1 Score: 137.5 bits (345), Expect = 3.3e-31
Identity = 96/317 (30.28%), Postives = 158/317 (49.84%), Query Frame = 0


Query: 78  SKRGLSSSQPDIED-LCKSSSTQKKIKVNESLLQRFRRNKGLAVTDITRTEWCEKQMEF- 137
           SK G S   P  +D L +S   ++++ V+ S ++RF   K L VTD++   WCE+QM + 
Sbjct: 39  SKPGPSYELPGKDDKLIRSPKWKRRLDVS-SPMERFHL-KYLYVTDLSTQNWCEQQMVYG 98

Query: 138 --YLFFGARRKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDRWALKLINFTFGVNQLLF 197
             +  F    K+  ++ G + H   E EV   V + + S ED WA+K +N    +  L  
Sbjct: 99  KEFSGFLTPEKSAILDTGASIHLARELEVHDLVSIPITSKEDAWAVKFLNILSMIPTLQS 158

Query: 198 EGLTRELPVMGLVDGIWMVGVIDELQMLEIDSGKIPMLVDTKTRMRDTIPAEPQRRNGKL 257
           EG  RE PV   V+G+ +VGVIDEL      SG++  L + KTR    +P++ Q++    
Sbjct: 159 EGRIREFPVFAEVEGVLLVGVIDELHYTA--SGELE-LTELKTRGNPVLPSDAQKKKDYF 218

Query: 258 QLMCYKYLLDSLTSDGFSSRQFFDFFSLNPYSILSEEISDSTTPFGFTAKTLDDVVR--Y 317
           Q+  YKY+ D++     ++        L+P   L   +       G++ K+L D++   +
Sbjct: 219 QVSLYKYIFDAMVQGKVTAASLIHHTKLDPEKPLGPSVLRHAQQGGYSVKSLGDLIELVF 278

Query: 318 YVNCCSMLPLTHNQLLLRYESQKDQSIIVEDEFAYDHDWLKSQLETSFQVWRGQREPECT 377
                S LPL  + L + Y  Q   +++  +  A+    ++S+++     W G REP+  
Sbjct: 279 LSLTLSDLPLI-DSLKIEYVHQGTATVLGTEMVAFAEKEVRSKVQHYMTYWMGHREPQGV 338

Query: 378 PQEERWKCRHCEFAPDC 389
             EE WKCR C +A  C
Sbjct: 339 DVEEAWKCRMCNYADIC 349

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BLAST of Tan0012256 vs. ExPASy Swiss-Prot
Match: Q9CXP9 (Exonuclease V OS=Mus musculus OX=10090 GN=Exo5 PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 8.4e-27
Identity = 94/320 (29.38%), Postives = 145/320 (45.31%), Query Frame = 0


Query: 73  SITLLSKRGLSSSQPDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAVTDITRTEWCEKQ 132
           S   LSK G S+  P  +D   S    K      S ++RF   K L VTD+    WCE Q
Sbjct: 37  SAVSLSKPGPSAELPGKDDKPVSLQNWKGGLDVLSPMERFHL-KYLYVTDLCTQNWCELQ 96

Query: 133 MEFYLFFGAR---RKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDRWALKLINFTFGVN 192
           M +           K   ++ G + H   E E+   V V + + ED WA+K +N    + 
Sbjct: 97  MVYGKELPGSLTPEKAAVLDTGASIHLAKELELHDLVTVPIATKEDAWAVKFLNILAMIP 156

Query: 193 QLLFEGLTRELPVMGLVDGIWMVGVIDELQMLEIDSGKIPMLVDTKTRMRDTIPAEPQRR 252
            L  EG  RE PV G V+GI++VGVIDEL       G++  L + KTR R  +P   Q++
Sbjct: 157 ALQSEGRVREFPVFGEVEGIFLVGVIDELHY--TSKGELE-LAELKTRRRPVLPLPAQKK 216

Query: 253 NGKLQLMCYKYLLDSLTSDGFSSRQFFDFFSLNPYSILSEEISDSTTPFGFTAKTLDDVV 312
               Q+  YKY+ D++     +         L     L   +       G + K+L D++
Sbjct: 217 KDYFQVSLYKYIFDAMVQGKVTPASLIHHTKLCLDKPLGPSVLRHARQGGVSVKSLGDLM 276

Query: 313 RYYVNCCSMLPL-THNQLLLRYESQKDQSIIVEDEFAYDHDWLKSQLETSFQVWRGQREP 372
                  ++  L   + L L Y  Q+  +I+  +  A++   +KS+++     W G R+P
Sbjct: 277 ELVFLSLTLSDLPAIDTLKLEYIHQETATILGTEIVAFEEKEVKSKVQHYVAYWMGHRDP 336

Query: 373 ECTPQEERWKCRHCEFAPDC 389
           +    EE WKCR C++   C
Sbjct: 337 QGVDVEEAWKCRTCDYVDIC 352

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BLAST of Tan0012256 vs. ExPASy Swiss-Prot
Match: Q9Y7L4 (Probable exonuclease V, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=exo5 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.5e-26
Identity = 106/364 (29.12%), Postives = 161/364 (44.23%), Query Frame = 0


Query: 76  LLSKRGLSSSQPDIEDLCKSSSTQKKIKVNESLLQRFRRNKG-LAVTDITRTEWCEKQME 135
           LL  R +S  + ++ ++ K S          SL Q FR++KG L VTD+    WCE Q E
Sbjct: 42  LLVSREISKLEDEVCEMLKES----------SLFQLFRKHKGYLNVTDLVLPLWCEVQHE 101

Query: 136 FYLFFGARRKTKAMEAGIARHAMLEAEVVKKVKVQV---KSAEDRWALKLINFTFGVNQL 195
           +YL    ++KT  ME GI  H +LE E     + +V    S E+ WAL+L+    G+  L
Sbjct: 102 YYLLRRIKKKTPKMERGIKLHQILEYETSPPSERRVLDRTSKEEPWALRLLRQLEGIMLL 161

Query: 196 LFEGLTRELPVMGLVDGIWMVGVIDELQMLEIDSGKIP--------------MLVDTKTR 255
              G+TRE P+ G      + G+IDE+ +                         VD KTR
Sbjct: 162 QKNGITREFPIWGYYKESSIFGIIDEISLNNPSKSNFNSDIRNYFNFKMYDLSFVDNKTR 221

Query: 256 MRDTIPAEPQRRNGKLQLMCYKYL-LDSLTSDGFSSRQFFDFFS------LNPYS----- 315
                P   Q  + K+QLM Y +L L+   S G   +  F   S      L+  S     
Sbjct: 222 FSSRKPGASQILSSKVQLMYYVHLFLNYFPSLGEKQQSIFRDISPTYSNRLHSQSHWWNM 281

Query: 316 ILSEEISDSTTPFG--FTAKTL-------DDVVRYYVNCCSM------------LPLTHN 375
            LS+   D T   G  F  +++       +DV   + +   +            L LT +
Sbjct: 282 FLSQLSLDGTKDLGPKFLEQSILSIPDIPEDVFAGHNSLNGLYALVFASAKKLHLRLTDD 341

Query: 376 QLLLRYESQKDQSIIVEDEFAYDHDWLKSQLETSFQVWRGQREPECTPQEERWKCRHCEF 389
            L + Y + K   ++ +D+F++ +  L++    ++Q W   REPE  P EE +KCR CEF
Sbjct: 342 NLTIAYRNDKTGEVVYKDKFSFSNKLLEASYTKAYQFWHNLREPEGVPAEEVYKCRSCEF 395

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BLAST of Tan0012256 vs. ExPASy Swiss-Prot
Match: Q9H790 (Exonuclease V OS=Homo sapiens OX=9606 GN=EXO5 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.2e-26
Identity = 84/286 (29.37%), Postives = 133/286 (46.50%), Query Frame = 0


Query: 107 SLLQRFRRNKGLAVTDITRTEWCEKQMEF---YLFFGARRKTKAMEAGIARHAMLEAEVV 166
           S ++RF   K L VTD+    WCE Q  +      F A  K   ++ G + H   E E+ 
Sbjct: 71  SPMERFHL-KYLYVTDLATQNWCELQTAYGKELPGFLAPEKAAVLDTGASIHLARELELH 130

Query: 167 KKVKVQVKSAEDRWALKLINFTFGVNQLLFEGLTRELPVMGLVDGIWMVGVIDELQMLEI 226
             V V V + ED WA+K +N    +  L  EG  RE PV G  +G+ +VGVIDEL     
Sbjct: 131 DLVTVPVTTKEDAWAIKFLNILLLIPTLQSEGHIREFPVFGEGEGVLLVGVIDELHYTA- 190

Query: 227 DSGKIPMLVDTKTRMRDTIPAEPQRRNGKLQLMCYKYLLDSLTSDGFSSRQFFDFFSLNP 286
             G++  L + KTR R  +P E Q++    Q+  YKY+ D++     +         L  
Sbjct: 191 -KGELE-LAELKTRRRPMLPLEAQKKKDCFQVSLYKYIFDAMVQGKVTPASLIHHTKLCL 250

Query: 287 YSILSEEISDSTTPFGFTAKTLDDVVRYYVNCCSMLPLTHNQLL-LRYESQKDQSIIVED 346
              L   +       GF+ K+L D++       ++  L    +L + Y  Q+  +++  +
Sbjct: 251 EKPLGPSVLRHAQQGGFSVKSLGDLMELVFLSLTLSDLPVIDILKIEYIHQETATVLGTE 310

Query: 347 EFAYDHDWLKSQLETSFQVWRGQREPECTPQEERWKCRHCEFAPDC 389
             A+    ++++++     W G REP+    EE WKCR C +A  C
Sbjct: 311 IVAFKEKEVRAKVQHYMAYWMGHREPQGVDVEEAWKCRTCTYADIC 352

[Close]

BLAST of Tan0012256 vs. NCBI nr
Match: XP_022985622.1 (exonuclease V, chloroplastic [Cucurbita maxima] >XP_022985623.1 exonuclease V, chloroplastic [Cucurbita maxima] >XP_022985624.1 exonuclease V, chloroplastic [Cucurbita maxima])

HSP 1 Score: 696.8 bits (1797), Expect = 1.1e-196
Identity = 350/401 (87.28%), Postives = 372/401 (92.77%), Query Frame = 0


Query: 1   MADSRSGLPPFNDDENTHEGVPEIPVEIVSDEEMALIEAALAAAVGTARSSSSAIHSPSC 60
           MADS SGLPP+NDD+NTH+GVP IPVEIVSDEEMALIEAALAAAV TARSSSSAIH PSC
Sbjct: 22  MADSSSGLPPYNDDDNTHKGVPNIPVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 81

Query: 61  SSQNLFNTRSIHSITLLSKRGLSSSQPDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120
           SSQNLFNTRSIHSITLLSKRGL SSQ D+EDLCKSSSTQKKIKVNESLLQRFRRNKGLAV
Sbjct: 82  SSQNLFNTRSIHSITLLSKRGLPSSQLDVEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 141

Query: 121 TDITRTEWCEKQMEFYLFFGARRKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDRWALK 180
           TDITRTEWCEKQME  L  G R+KTKAMEAGIARHAMLEAEVVKKVKVQVKSAED WALK
Sbjct: 142 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 201

Query: 181 LINFTFGVNQLLFEGLTRELPVMGLVDGIWMVGVIDELQMLEIDSGKIPMLVDTKTRMRD 240
           L+NFTFGVNQLLFEGLTRELPVMGLV+G+WMVGVIDE+QMLEI + K+PML+DTKTRMR 
Sbjct: 202 LLNFTFGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 261

Query: 241 TIPAEPQRRNGKLQLMCYKYLLDSLTSDGFSSRQFFDFFSLNPYSILSEEISDSTTPFGF 300
           TIPAEPQ+RNGKLQLMCYK+LLD L  DGFS+RQFFDFFSLNP+SILSEEI+DS+  FGF
Sbjct: 262 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSSASFGF 321

Query: 301 TAKTLDDVVRYYVNCCSMLPLTHNQLLLRYESQKDQSIIVEDEFAYDHDWLKSQLETSFQ 360
           TAKTLDDVVRYY+NCCSMLP THNQLLLRYESQKDQSII EDEFAYDH WLKSQLETS Q
Sbjct: 322 TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIREDEFAYDHGWLKSQLETSLQ 381

Query: 361 VWRGQREPECTPQEERWKCRHCEFAPDCPANANLDETRKAE 402
           VW GQREPECTP EERWKCRHC++A DCPANA+LD TRK E
Sbjct: 382 VWHGQREPECTPPEERWKCRHCQYASDCPANASLDPTRKPE 422

[Close]

BLAST of Tan0012256 vs. NCBI nr
Match: XP_023511975.1 (LOW QUALITY PROTEIN: exonuclease V, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 696.4 bits (1796), Expect = 1.4e-196
Identity = 352/401 (87.78%), Postives = 371/401 (92.52%), Query Frame = 0


Query: 1   MADSRSGLPPFNDDENTHEGVPEIPVEIVSDEEMALIEAALAAAVGTARSSSSAIHSPSC 60
           MADS SGLPPFNDD+NTH+GVP IPVEIVSDEEMALIEAALAAAV TARSSSSAIH PSC
Sbjct: 22  MADSSSGLPPFNDDDNTHKGVPNIPVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 81

Query: 61  SSQNLFNTRSIHSITLLSKRGLSSSQPDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120
           SSQNLFNTRSIHSITLLSKRGL SSQ DIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV
Sbjct: 82  SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 141

Query: 121 TDITRTEWCEKQMEFYLFFGARRKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDRWALK 180
           TDITRTEWCEKQME  L  G R+KTKAMEAGIARHAMLEAEVVKKVKVQVKSAED WALK
Sbjct: 142 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 201

Query: 181 LINFTFGVNQLLFEGLTRELPVMGLVDGIWMVGVIDELQMLEIDSGKIPMLVDTKTRMRD 240
           L+NFTFGVNQLLFEGLTRELPVMGLV+G+WMVGVIDE+QMLEI + K+PML+DTKTRMR 
Sbjct: 202 LLNFTFGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 261

Query: 241 TIPAEPQRRNGKLQLMCYKYLLDSLTSDGFSSRQFFDFFSLNPYSILSEEISDSTTPFGF 300
           TIPAEPQ+RNGKLQLMCYK+LLD L  DGFS+RQFFDFFSLNP+SILSEEI+DST   GF
Sbjct: 262 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTASSGF 321

Query: 301 TAKTLDDVVRYYVNCCSMLPLTHNQLLLRYESQKDQSIIVEDEFAYDHDWLKSQLETSFQ 360
           TAKTLDDVVRYY+NCCSMLP THNQLLLRYESQKDQSII EDEFAYDH WLKSQLETS Q
Sbjct: 322 TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ 381

Query: 361 VWRGQREPECTPQEERWKCRHCEFAPDCPANANLDETRKAE 402
           VW GQREPECTP EERWKCRHC++A DCPANA+LD TRK E
Sbjct: 382 VWHGQREPECTPLEERWKCRHCQYASDCPANASLDPTRKPE 422

[Close]

BLAST of Tan0012256 vs. NCBI nr
Match: XP_022943527.1 (LOW QUALITY PROTEIN: exonuclease V, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 691.8 bits (1784), Expect = 3.5e-195
Identity = 349/401 (87.03%), Postives = 370/401 (92.27%), Query Frame = 0


Query: 1   MADSRSGLPPFNDDENTHEGVPEIPVEIVSDEEMALIEAALAAAVGTARSSSSAIHSPSC 60
           MADS SGLPPFNDD+NTH+ VP IPVEIVSDEEMALIEAALAAAV TARSSSSAIH PSC
Sbjct: 22  MADSSSGLPPFNDDDNTHKDVPNIPVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 81

Query: 61  SSQNLFNTRSIHSITLLSKRGLSSSQPDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120
           SSQNLFNTRSIHSITLLSKRGL SSQ DIEDLCKSSSTQKKIKVNESLLQRFRR KGLAV
Sbjct: 82  SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRTKGLAV 141

Query: 121 TDITRTEWCEKQMEFYLFFGARRKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDRWALK 180
           TDITRTEWCEKQME  L  G R+KTKAMEAGIARHAMLE+EVVKKVKVQVKSAED WALK
Sbjct: 142 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLESEVVKKVKVQVKSAEDNWALK 201

Query: 181 LINFTFGVNQLLFEGLTRELPVMGLVDGIWMVGVIDELQMLEIDSGKIPMLVDTKTRMRD 240
           L+NFTFGVNQLLFEGLTRELPVMGLV+G+WMVGVIDE+QMLEI + K+PML+DTKTRMR 
Sbjct: 202 LLNFTFGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 261

Query: 241 TIPAEPQRRNGKLQLMCYKYLLDSLTSDGFSSRQFFDFFSLNPYSILSEEISDSTTPFGF 300
           TIPAEPQ+RNGKLQLMCYK+LLD L  DGFS+RQFFDFFSLNP+SILSEEI+DST  FGF
Sbjct: 262 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGF 321

Query: 301 TAKTLDDVVRYYVNCCSMLPLTHNQLLLRYESQKDQSIIVEDEFAYDHDWLKSQLETSFQ 360
           TAKTLDDVVRYY+NCCSMLP THNQLLLRYESQKDQSII EDEFAYDH WLKSQLETS Q
Sbjct: 322 TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ 381

Query: 361 VWRGQREPECTPQEERWKCRHCEFAPDCPANANLDETRKAE 402
           VW GQREPECTP EERWKCRHC++A +CPANA+LD TRK E
Sbjct: 382 VWHGQREPECTPPEERWKCRHCQYASNCPANASLDPTRKPE 422

[Close]

BLAST of Tan0012256 vs. NCBI nr
Match: KAG6570766.1 (Exonuclease V, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 691.0 bits (1782), Expect = 5.9e-195
Identity = 348/401 (86.78%), Postives = 369/401 (92.02%), Query Frame = 0


Query: 1   MADSRSGLPPFNDDENTHEGVPEIPVEIVSDEEMALIEAALAAAVGTARSSSSAIHSPSC 60
           MADS SGLPPFNDD+NTH+ +P IPVEIVSDEEMALIEAALAAAV TARSSSSAIH PSC
Sbjct: 1   MADSSSGLPPFNDDDNTHKDIPNIPVEIVSDEEMALIEAALAAAVNTARSSSSAIHPPSC 60

Query: 61  SSQNLFNTRSIHSITLLSKRGLSSSQPDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120
           SSQNLF+TRSIHSITLLSKRGL SSQ DIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV
Sbjct: 61  SSQNLFHTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120

Query: 121 TDITRTEWCEKQMEFYLFFGARRKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDRWALK 180
           TDITRTEWCEKQME  L  G R+KTKAMEAGIARHAMLEAEVVKKVKVQVKSAED WALK
Sbjct: 121 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 180

Query: 181 LINFTFGVNQLLFEGLTRELPVMGLVDGIWMVGVIDELQMLEIDSGKIPMLVDTKTRMRD 240
           L+NFTFGVNQLLFEGLTRELPVMGLV+G+WMVGVIDE+QMLEI + K+PML+DTKTRMR 
Sbjct: 181 LLNFTFGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 240

Query: 241 TIPAEPQRRNGKLQLMCYKYLLDSLTSDGFSSRQFFDFFSLNPYSILSEEISDSTTPFGF 300
           TIPAEPQ+RNGKLQLMCYK+LLD L  DGFS+RQFFDFFSLNP+SILSEEI+DST  FGF
Sbjct: 241 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGF 300

Query: 301 TAKTLDDVVRYYVNCCSMLPLTHNQLLLRYESQKDQSIIVEDEFAYDHDWLKSQLETSFQ 360
           TAKTLDDVVRYY+NCCSMLP  HNQLLLRYESQKDQSII EDEFAYDH WLKSQLETS Q
Sbjct: 301 TAKTLDDVVRYYINCCSMLPPVHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ 360

Query: 361 VWRGQREPECTPQEERWKCRHCEFAPDCPANANLDETRKAE 402
           VW GQREPECTP EERWKCRHC++A DCPANA+L  TRK E
Sbjct: 361 VWHGQREPECTPPEERWKCRHCQYASDCPANASLKPTRKPE 401

[Close]

BLAST of Tan0012256 vs. NCBI nr
Match: KAG7010613.1 (Exonuclease V, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 688.0 bits (1774), Expect = 5.0e-194
Identity = 348/401 (86.78%), Postives = 368/401 (91.77%), Query Frame = 0


Query: 1   MADSRSGLPPFNDDENTHEGVPEIPVEIVSDEEMALIEAALAAAVGTARSSSSAIHSPSC 60
           MADS SGLPPFNDD+NTH+ +P I VEIVSDEEMALIEAALAAAV TARSSSSAIH PSC
Sbjct: 1   MADSSSGLPPFNDDDNTHKDIPNIAVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 60

Query: 61  SSQNLFNTRSIHSITLLSKRGLSSSQPDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120
           SSQNLFNTRSIHSITLLSKRGL SSQ DIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV
Sbjct: 61  SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120

Query: 121 TDITRTEWCEKQMEFYLFFGARRKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDRWALK 180
           TDITRTEWCEKQME  L  G R+KTKAMEAGIARHAMLEAEVVKKVKVQVKSAED WALK
Sbjct: 121 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 180

Query: 181 LINFTFGVNQLLFEGLTRELPVMGLVDGIWMVGVIDELQMLEIDSGKIPMLVDTKTRMRD 240
           L+NFT GVNQLLFEGLTRELPVMGLV+G+WMVGVIDE+QMLEI + K+PML+DTKTRMR 
Sbjct: 181 LLNFTSGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 240

Query: 241 TIPAEPQRRNGKLQLMCYKYLLDSLTSDGFSSRQFFDFFSLNPYSILSEEISDSTTPFGF 300
           TIPAEPQ+RNGKLQLMCYK+LLD L  DGFS+RQFFDFFSLNP+SILSEEI+DST  FGF
Sbjct: 241 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGF 300

Query: 301 TAKTLDDVVRYYVNCCSMLPLTHNQLLLRYESQKDQSIIVEDEFAYDHDWLKSQLETSFQ 360
           TAKTLDDVVRYY+NCCSMLP THNQLLLRYESQKDQSII EDEFAYDH WLKSQLETS Q
Sbjct: 301 TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ 360

Query: 361 VWRGQREPECTPQEERWKCRHCEFAPDCPANANLDETRKAE 402
           VW GQREPECTP EERWKCRHC++A DCPANA+L  TRK E
Sbjct: 361 VWHGQREPECTPPEERWKCRHCQYASDCPANASLKPTRKPE 401

[Close]

BLAST of Tan0012256 vs. ExPASy TrEMBL
Match: A0A6J1J5D7 (exonuclease V, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111483632 PE=3 SV=1)

HSP 1 Score: 696.8 bits (1797), Expect = 5.2e-197
Identity = 350/401 (87.28%), Postives = 372/401 (92.77%), Query Frame = 0


Query: 1   MADSRSGLPPFNDDENTHEGVPEIPVEIVSDEEMALIEAALAAAVGTARSSSSAIHSPSC 60
           MADS SGLPP+NDD+NTH+GVP IPVEIVSDEEMALIEAALAAAV TARSSSSAIH PSC
Sbjct: 22  MADSSSGLPPYNDDDNTHKGVPNIPVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 81

Query: 61  SSQNLFNTRSIHSITLLSKRGLSSSQPDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120
           SSQNLFNTRSIHSITLLSKRGL SSQ D+EDLCKSSSTQKKIKVNESLLQRFRRNKGLAV
Sbjct: 82  SSQNLFNTRSIHSITLLSKRGLPSSQLDVEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 141

Query: 121 TDITRTEWCEKQMEFYLFFGARRKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDRWALK 180
           TDITRTEWCEKQME  L  G R+KTKAMEAGIARHAMLEAEVVKKVKVQVKSAED WALK
Sbjct: 142 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDNWALK 201

Query: 181 LINFTFGVNQLLFEGLTRELPVMGLVDGIWMVGVIDELQMLEIDSGKIPMLVDTKTRMRD 240
           L+NFTFGVNQLLFEGLTRELPVMGLV+G+WMVGVIDE+QMLEI + K+PML+DTKTRMR 
Sbjct: 202 LLNFTFGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 261

Query: 241 TIPAEPQRRNGKLQLMCYKYLLDSLTSDGFSSRQFFDFFSLNPYSILSEEISDSTTPFGF 300
           TIPAEPQ+RNGKLQLMCYK+LLD L  DGFS+RQFFDFFSLNP+SILSEEI+DS+  FGF
Sbjct: 262 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSSASFGF 321

Query: 301 TAKTLDDVVRYYVNCCSMLPLTHNQLLLRYESQKDQSIIVEDEFAYDHDWLKSQLETSFQ 360
           TAKTLDDVVRYY+NCCSMLP THNQLLLRYESQKDQSII EDEFAYDH WLKSQLETS Q
Sbjct: 322 TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIREDEFAYDHGWLKSQLETSLQ 381

Query: 361 VWRGQREPECTPQEERWKCRHCEFAPDCPANANLDETRKAE 402
           VW GQREPECTP EERWKCRHC++A DCPANA+LD TRK E
Sbjct: 382 VWHGQREPECTPPEERWKCRHCQYASDCPANASLDPTRKPE 422

[Close]

BLAST of Tan0012256 vs. ExPASy TrEMBL
Match: A0A6J1FT99 (LOW QUALITY PROTEIN: exonuclease V, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111448276 PE=3 SV=1)

HSP 1 Score: 691.8 bits (1784), Expect = 1.7e-195
Identity = 349/401 (87.03%), Postives = 370/401 (92.27%), Query Frame = 0


Query: 1   MADSRSGLPPFNDDENTHEGVPEIPVEIVSDEEMALIEAALAAAVGTARSSSSAIHSPSC 60
           MADS SGLPPFNDD+NTH+ VP IPVEIVSDEEMALIEAALAAAV TARSSSSAIH PSC
Sbjct: 22  MADSSSGLPPFNDDDNTHKDVPNIPVEIVSDEEMALIEAALAAAVTTARSSSSAIHPPSC 81

Query: 61  SSQNLFNTRSIHSITLLSKRGLSSSQPDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120
           SSQNLFNTRSIHSITLLSKRGL SSQ DIEDLCKSSSTQKKIKVNESLLQRFRR KGLAV
Sbjct: 82  SSQNLFNTRSIHSITLLSKRGLPSSQLDIEDLCKSSSTQKKIKVNESLLQRFRRTKGLAV 141

Query: 121 TDITRTEWCEKQMEFYLFFGARRKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDRWALK 180
           TDITRTEWCEKQME  L  G R+KTKAMEAGIARHAMLE+EVVKKVKVQVKSAED WALK
Sbjct: 142 TDITRTEWCEKQMELCLLSGVRKKTKAMEAGIARHAMLESEVVKKVKVQVKSAEDNWALK 201

Query: 181 LINFTFGVNQLLFEGLTRELPVMGLVDGIWMVGVIDELQMLEIDSGKIPMLVDTKTRMRD 240
           L+NFTFGVNQLLFEGLTRELPVMGLV+G+WMVGVIDE+QMLEI + K+PML+DTKTRMR 
Sbjct: 202 LLNFTFGVNQLLFEGLTRELPVMGLVEGVWMVGVIDEIQMLEIGTCKVPMLIDTKTRMRH 261

Query: 241 TIPAEPQRRNGKLQLMCYKYLLDSLTSDGFSSRQFFDFFSLNPYSILSEEISDSTTPFGF 300
           TIPAEPQ+RNGKLQLMCYK+LLD L  DGFS+RQFFDFFSLNP+SILSEEI+DST  FGF
Sbjct: 262 TIPAEPQQRNGKLQLMCYKFLLDCLICDGFSTRQFFDFFSLNPHSILSEEIADSTVSFGF 321

Query: 301 TAKTLDDVVRYYVNCCSMLPLTHNQLLLRYESQKDQSIIVEDEFAYDHDWLKSQLETSFQ 360
           TAKTLDDVVRYY+NCCSMLP THNQLLLRYESQKDQSII EDEFAYDH WLKSQLETS Q
Sbjct: 322 TAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIGEDEFAYDHGWLKSQLETSLQ 381

Query: 361 VWRGQREPECTPQEERWKCRHCEFAPDCPANANLDETRKAE 402
           VW GQREPECTP EERWKCRHC++A +CPANA+LD TRK E
Sbjct: 382 VWHGQREPECTPPEERWKCRHCQYASNCPANASLDPTRKPE 422

[Close]

BLAST of Tan0012256 vs. ExPASy TrEMBL
Match: A0A5A7SXN1 (Exonuclease V OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00520 PE=3 SV=1)

HSP 1 Score: 641.7 bits (1654), Expect = 2.0e-180
Identity = 327/393 (83.21%), Postives = 353/393 (89.82%), Query Frame = 0


Query: 1   MADSRSGLPPFNDDENTHEGVPEIPVEIVSDEEMALIEAALAAAVGTARSSSSAIHSPSC 60
           MADS SGLPPF DD+NTHEG P IPVEIVSDEEMALIEAALAAAV T+RSSSS IHS SC
Sbjct: 1   MADSHSGLPPFKDDDNTHEGFPNIPVEIVSDEEMALIEAALAAAVTTSRSSSSVIHSTSC 60

Query: 61  SSQNLFNTRSIHSITLLSKRGLSSSQPDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120
           SS NLFNTRSIHSITLLSKRG+ SSQPDIEDL K   TQKKIKVNESLLQRF+RNK LAV
Sbjct: 61  SSHNLFNTRSIHSITLLSKRGIDSSQPDIEDLGKIPITQKKIKVNESLLQRFKRNKPLAV 120

Query: 121 TDITRTEWCEKQMEFYLFFGARRKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDRWALK 180
           TDITR EWCEKQMEF L  G R+KTKAMEAGIARHAMLEAEVVKKVKVQV+S ED WALK
Sbjct: 121 TDITRMEWCEKQMEFSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVQSFEDIWALK 180

Query: 181 LINFTFGVNQLLFEGLTRELPVMGLVDGIWMVGVIDELQMLEIDSGKIPMLVDTKTRMRD 240
           L+NF  GV+QL+ EGLTRELPVMGLV+G+W+VG+IDE+QMLEI++ KIPML+DTKTR+RD
Sbjct: 181 LLNFIVGVHQLVLEGLTRELPVMGLVEGVWIVGIIDEIQMLEINTTKIPMLIDTKTRVRD 240

Query: 241 TIPAEPQRRNGKLQLMCYKYLLDSL-TSDGFSSRQFFDFFSLNPYSILSEEISDSTTPFG 300
           TIPA PQRRNGKLQLM YK LLD+L +SDGF  RQFFDFFSLNP+S LSEEI+DS+T FG
Sbjct: 241 TIPAVPQRRNGKLQLMFYKLLLDNLISSDGFPIRQFFDFFSLNPHSTLSEEIADSSTSFG 300

Query: 301 FTAKTLDDVVRYYVNCCSMLPLTHNQLLLRYESQKDQSIIVEDEFAYDHDWLKSQLETSF 360
           FTAKTLDDVVRYY+NCCSMLP THNQLLLRYESQKDQSIIVED+FAYDH WLKSQLE   
Sbjct: 301 FTAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIVEDKFAYDHGWLKSQLEIQL 360

Query: 361 QVWRGQREPECTPQEERWKCRHCEFAPDCPANA 393
           QVW GQREPECTPQEERWKCRHC+FA DCPANA
Sbjct: 361 QVWHGQREPECTPQEERWKCRHCQFASDCPANA 393

[Close]

BLAST of Tan0012256 vs. ExPASy TrEMBL
Match: A0A1S3CLU8 (LOW QUALITY PROTEIN: exonuclease V, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501929 PE=3 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 9.9e-180
Identity = 326/393 (82.95%), Postives = 352/393 (89.57%), Query Frame = 0


Query: 1   MADSRSGLPPFNDDENTHEGVPEIPVEIVSDEEMALIEAALAAAVGTARSSSSAIHSPSC 60
           MADS SGLPPF DD+NTHEG P IPVEIVSDEEMALIEAALAAAV T+RSSSS IHS SC
Sbjct: 1   MADSHSGLPPFKDDDNTHEGFPNIPVEIVSDEEMALIEAALAAAVTTSRSSSSVIHSTSC 60

Query: 61  SSQNLFNTRSIHSITLLSKRGLSSSQPDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120
           SS NLFNTRSIHSITLLSKRG+ SSQPDIEDL K   TQKKIKVNESLLQRF+RNK LAV
Sbjct: 61  SSHNLFNTRSIHSITLLSKRGIDSSQPDIEDLGKIPITQKKIKVNESLLQRFKRNKPLAV 120

Query: 121 TDITRTEWCEKQMEFYLFFGARRKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDRWALK 180
           TDITR EWCEKQMEF L  G R+KTKAMEAGIARHAMLEAEVVKKVKVQV+S ED WALK
Sbjct: 121 TDITRMEWCEKQMEFSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVQSFEDIWALK 180

Query: 181 LINFTFGVNQLLFEGLTRELPVMGLVDGIWMVGVIDELQMLEIDSGKIPMLVDTKTRMRD 240
           L+NF  GV+QL+ EGLTRELPVMGLV+G+W+VG+IDE+QMLEI++ KIPML+DTKTR+RD
Sbjct: 181 LLNFIVGVHQLVLEGLTRELPVMGLVEGVWIVGIIDEIQMLEINTTKIPMLIDTKTRVRD 240

Query: 241 TIPAEPQRRNGKLQLMCYKYLLDSL-TSDGFSSRQFFDFFSLNPYSILSEEISDSTTPFG 300
           TIPA PQRRNGKLQLM YK LLD+L +SDGF S  FFDFFSLNP+S LSEEI+DS+T FG
Sbjct: 241 TIPAVPQRRNGKLQLMFYKLLLDNLISSDGFPSDNFFDFFSLNPHSTLSEEIADSSTSFG 300

Query: 301 FTAKTLDDVVRYYVNCCSMLPLTHNQLLLRYESQKDQSIIVEDEFAYDHDWLKSQLETSF 360
           FTAKTLDDVVRYY+NCCSMLP THNQLLLRYESQKDQSIIVED+FAYDH WLKSQLE   
Sbjct: 301 FTAKTLDDVVRYYINCCSMLPPTHNQLLLRYESQKDQSIIVEDKFAYDHGWLKSQLEIQL 360

Query: 361 QVWRGQREPECTPQEERWKCRHCEFAPDCPANA 393
           QVW GQREPECTPQEERWKCRHC+FA DCPANA
Sbjct: 361 QVWHGQREPECTPQEERWKCRHCQFASDCPANA 393

[Close]

BLAST of Tan0012256 vs. ExPASy TrEMBL
Match: A0A0A0KC56 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G290860 PE=3 SV=1)

HSP 1 Score: 638.6 bits (1646), Expect = 1.7e-179
Identity = 323/392 (82.40%), Postives = 351/392 (89.54%), Query Frame = 0


Query: 1   MADSRSGLPPFNDDENTHEGVPEIPVEIVSDEEMALIEAALAAAVGTARSSSSAIHSPSC 60
           MADS SGLPPF DD+NTHEG P IPVEIVSDEEMALIEAALAAAV T+RSSSS IHS S 
Sbjct: 1   MADSHSGLPPFKDDDNTHEGFPNIPVEIVSDEEMALIEAALAAAVTTSRSSSSVIHSTSS 60

Query: 61  SSQNLFNTRSIHSITLLSKRGLSSSQPDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAV 120
           SS +LFNTRSIHSITLLSKRG+ S+QPDIEDL K   TQKKIKVNESLLQRF+RNK LAV
Sbjct: 61  SSHSLFNTRSIHSITLLSKRGIHSTQPDIEDLGKIPITQKKIKVNESLLQRFKRNKPLAV 120

Query: 121 TDITRTEWCEKQMEFYLFFGARRKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDRWALK 180
           TDITR EWCEKQMEF L  G R+KTKAMEAGIARHAMLEAEVVKKVKVQV+S ED WALK
Sbjct: 121 TDITRMEWCEKQMEFSLLSGVRKKTKAMEAGIARHAMLEAEVVKKVKVQVQSIEDIWALK 180

Query: 181 LINFTFGVNQLLFEGLTRELPVMGLVDGIWMVGVIDELQMLEIDSGKIPMLVDTKTRMRD 240
           L+NF  GV+QL+ EGLTRELPVMGLV+G+W+VG+IDE+QMLEID+ KIPML+DTKTR+RD
Sbjct: 181 LLNFIVGVHQLVLEGLTRELPVMGLVEGVWIVGIIDEIQMLEIDTTKIPMLIDTKTRVRD 240

Query: 241 TIPAEPQRRNGKLQLMCYKYLLDSLTSDGFSSRQFFDFFSLNPYSILSEEISDSTTPFGF 300
           TIPA PQRRNGKLQLM YK+LLD+L SDG S RQFFDFFSLNP+S LSEEISD+TT  GF
Sbjct: 241 TIPAVPQRRNGKLQLMFYKFLLDNLISDGLSIRQFFDFFSLNPHSTLSEEISDTTTSIGF 300

Query: 301 TAKTLDDVVRYYVNCCSMLPLTHNQLLLRYESQKDQSIIVEDEFAYDHDWLKSQLETSFQ 360
           TAKTLDDVVRYY+NCCSMLP THNQLL+RYESQKDQSIIVED+FAYDH WLK+QLET  Q
Sbjct: 301 TAKTLDDVVRYYINCCSMLPPTHNQLLIRYESQKDQSIIVEDKFAYDHGWLKTQLETQLQ 360

Query: 361 VWRGQREPECTPQEERWKCRHCEFAPDCPANA 393
           VW GQREPECTPQEERWKCRHC+FA DCP NA
Sbjct: 361 VWHGQREPECTPQEERWKCRHCQFAFDCPTNA 392

[Close]

BLAST of Tan0012256 vs. TAIR 10
Match: AT5G60370.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Defects-in-morphology protein 1-like, mitochondrial (InterPro:IPR019190); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 369.0 bits (946), Expect = 4.8e-102
Identity = 203/394 (51.52%), Postives = 267/394 (67.77%), Query Frame = 0


Query: 4   SRSGLPPFNDDENTHEGVPEIPVEIVSDEEMALIEAALAAAVGTARSSSSAIHSPSCSSQ 63
           ++SG    +  ++ H   PEIP+EIVS+EEMA+++AALAA+     S   ++ SPS  + 
Sbjct: 22  AQSGTVSISSPQSHHVVFPEIPIEIVSEEEMAILDAALAASRSILPSVIRSV-SPSRITA 81

Query: 64  NLFNTRSIHSITLLSKRGLSSSQPDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAVTDI 123
              + ++I SITL SKR LS+   DIE               ES L RFRRN+ L VTD+
Sbjct: 82  G-GSPKTIRSITLFSKRKLSACS-DIE---------------ESYLHRFRRNQALGVTDL 141

Query: 124 TRTEWCEKQMEFYLFFGARRKTKAMEAGIARHAMLEAEVVKKVKVQVKSAEDRWALKLIN 183
           T TEWCEKQME  L FG R+  KAM+ G ARH  LE EVVKKV+V+V+S ED+WALKL+N
Sbjct: 142 TGTEWCEKQMENVLCFGRRKVNKAMKVGQARHLQLEEEVVKKVRVKVESNEDKWALKLLN 201

Query: 184 FTFGVNQLLFEGLTRELPVMGLVDGIWMVGVIDELQ--MLEIDSGKIPMLVDTKTRMRDT 243
              GVNQ LFEG TREL ++G V G W+VG+IDEL+    E  S   P+L+DTKTR+RDT
Sbjct: 202 SIAGVNQFLFEGRTRELLLLGFVGGQWIVGIIDELRKAYAEESSDSGPILIDTKTRLRDT 261

Query: 244 IPAEPQRRNGKLQLMCYKYLLDSLTSDGFSSRQFFDFFSLNPYSILSEEISDSTTPFGFT 303
           +PAEPQRRNG+LQLM YK L D++  +GF +  FFD+FSLN   +LS+++ D     G  
Sbjct: 262 LPAEPQRRNGRLQLMLYKLLWDTIVKEGFPTGPFFDYFSLNRNYVLSQDVRDHIANAGIK 321

Query: 304 AKTLDDVVRYYVNCCSMLPLTHNQLLLRYESQKDQSIIVEDEFAYDHDWLKSQLETSFQV 363
           A+TL+++VRYY N   MLP+ +NQLLL+YE QKDQSII E  F +DH+W+ S+     + 
Sbjct: 322 AQTLEEIVRYYENTFQMLPIANNQLLLKYEFQKDQSIIAEIRFNHDHEWVMSKYREVIEF 381

Query: 364 WRGQREPECTPQEERWKCRHCEFAPDCPANANLD 396
           WR +RE   TP+EERWKCR+C+FA  CP N + +
Sbjct: 382 WRNEREAGYTPEEERWKCRYCQFAKSCPGNPSFE 397

[Close]

BLAST of Tan0012256 vs. TAIR 10
Match: AT3G57110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G60370.1); Has 16 Blast hits to 16 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.1 bits (131), Expect = 1.5e-07
Identity = 45/124 (36.29%), Postives = 66/124 (53.23%), Query Frame = 0


Query: 4   SRSGLPPFNDDENTHEGVPEIPVEIVSDEEMALIEAALAAAVGTARSSSSAIHSPSCSSQ 63
           ++SG    +  ++ H   PEIP+EI+++EE+ +++AALAA+        S I S S S  
Sbjct: 22  AQSGTVSISSPQSHHVVFPEIPIEIINEEEIVILDAALAASHSIL---PSVIRSVSPSQM 81

Query: 64  NLFNTR-SIHSITLLSKRGLSSSQPDIEDLCKSSSTQKKIKVNESLLQRFRRNKGLAVTD 123
               +  +I SITL SKR LS+                 + + ES L RFRRN+ L VTD
Sbjct: 82  IAGGSPITIRSITLFSKRKLSAC----------------LYIEESYLHRFRRNQSLGVTD 126

Query: 124 ITRT 127
           +T T
Sbjct: 142 LTGT 126

The following BLAST results are available for this feature:

BLAST of Tan0012256 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKK6	6.8e-101	51.52	Exonuclease V, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g60370 PE=2 S...	[more]
A2VDX7	3.3e-31	30.28	Exonuclease V OS=Bos taurus OX=9913 GN=EXO5 PE=2 SV=2	[more]
Q9CXP9	8.4e-27	29.38	Exonuclease V OS=Mus musculus OX=10090 GN=Exo5 PE=2 SV=1	[more]
Q9Y7L4	2.5e-26	29.12	Probable exonuclease V, mitochondrial OS=Schizosaccharomyces pombe (strain 972 /...	[more]
Q9H790	3.2e-26	29.37	Exonuclease V OS=Homo sapiens OX=9606 GN=EXO5 PE=1 SV=1	[more]

BLAST of Tan0012256 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022985622.1	1.1e-196	87.28	exonuclease V, chloroplastic [Cucurbita maxima] >XP_022985623.1 exonuclease V, c...	[more]
XP_023511975.1	1.4e-196	87.78	LOW QUALITY PROTEIN: exonuclease V, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022943527.1	3.5e-195	87.03	LOW QUALITY PROTEIN: exonuclease V, chloroplastic-like [Cucurbita moschata]	[more]
KAG6570766.1	5.9e-195	86.78	Exonuclease V, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7010613.1	5.0e-194	86.78	Exonuclease V, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Tan0012256 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1J5D7	5.2e-197	87.28	exonuclease V, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111483632 PE=3 SV...	[more]
A0A6J1FT99	1.7e-195	87.03	LOW QUALITY PROTEIN: exonuclease V, chloroplastic-like OS=Cucurbita moschata OX=...	[more]
A0A5A7SXN1	2.0e-180	83.21	Exonuclease V OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00520 P...	[more]
A0A1S3CLU8	9.9e-180	82.95	LOW QUALITY PROTEIN: exonuclease V, chloroplastic OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0KC56	1.7e-179	82.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G290860 PE=3 SV=1	[more]

BLAST of Tan0012256 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60370.1	4.8e-102	51.52	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT3G57110.1	1.5e-07	36.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019190	Exonuclease V	PFAM	PF09810	Exo5	coord: 320..388 e-value: 1.8E-14 score: 54.0 coord: 230..292 e-value: 9.5E-9 score: 35.2 coord: 107..221 e-value: 3.0E-34 score: 119.1
IPR019190	Exonuclease V	PANTHER	PTHR14464	EXONUCLEASE V	coord: 14..397
IPR011604	Exonuclease, phage-type/RecB, C-terminal	GENE3D	3.90.320.10		coord: 96..391 e-value: 2.9E-9 score: 39.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0012256.1	Tan0012256.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0036297	interstrand cross-link repair
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
cellular_component	GO:0005634	nucleus
molecular_function	GO:0045145	single-stranded DNA 5'-3' exodeoxyribonuclease activity