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Tan0012223 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGTGCCAAGCTGCAACCCAGACGAGATTTCGGGCATTGAAACATGAGAATGGAATTGCAGGAAAACCAACAATTATAGTTAGAGTGATCGCATGTTTTCAACCTTTGCAGAATTGTCAGGTTCGTCAACTCAGTTTCTGCCTCCTTGTTTTTCTTGTTGATTAATAATTGAATTAATTCTACATTATTTTATCCGGATCTGTCTGTATCTATCTTTCCCTGTAATTTGCTCATTGAATACCATGATGAAACTTTGGTATTTTCTGTTTCAGGCCGAGTATTTTCGACAGTTGCTTAAGCCTGTCACGTAG ATGGTGTGCCAAGCTGCAACCCAGACGAGATTTCGGGCATTGAAACATGAGAATGGAATTGCAGGAAAACCAACAATTATAGTTAGAGTGATCGCATGTTTTCAACCTTTGCAGAATTGTCAGGCCGAGTATTTTCGACAGTTGCTTAAGCCTGTCACGTAG ATGGTGTGCCAAGCTGCAACCCAGACGAGATTTCGGGCATTGAAACATGAGAATGGAATTGCAGGAAAACCAACAATTATAGTTAGAGTGATCGCATGTTTTCAACCTTTGCAGAATTGTCAGGCCGAGTATTTTCGACAGTTGCTTAAGCCTGTCACGTAG MVCQAATQTRFRALKHENGIAGKPTIIVRVIACFQPLQNCQAEYFRQLLKPVT Homology
BLAST of Tan0012223 vs. NCBI nr
Match: KAG7014898.1 (hypothetical protein SDJN02_22529 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 113.6 bits (283), Expect = 5.2e-22 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of Tan0012223 vs. NCBI nr
Match: XP_016902954.1 (PREDICTED: uncharacterized protein LOC103501164 isoform X2 [Cucumis melo]) HSP 1 Score: 111.7 bits (278), Expect = 2.0e-21 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of Tan0012223 vs. NCBI nr
Match: KAG7030896.1 (hypothetical protein SDJN02_04933, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 110.2 bits (274), Expect = 5.7e-21 Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 0
BLAST of Tan0012223 vs. NCBI nr
Match: KAG6576874.1 (Transcription factor basic helix-loop-helix 143, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 109.8 bits (273), Expect = 7.5e-21 Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
BLAST of Tan0012223 vs. NCBI nr
Match: XP_016901746.1 (PREDICTED: uncharacterized protein LOC103495379 isoform X2 [Cucumis melo]) HSP 1 Score: 109.0 bits (271), Expect = 1.3e-20 Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of Tan0012223 vs. ExPASy TrEMBL
Match: A0A0A0KVT2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G113180 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 7.3e-22 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of Tan0012223 vs. ExPASy TrEMBL
Match: A0A1S4E402 (uncharacterized protein LOC103501164 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501164 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 9.5e-22 Identity = 52/53 (98.11%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of Tan0012223 vs. ExPASy TrEMBL
Match: A0A0A0K458 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G066260 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 6.2e-21 Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of Tan0012223 vs. ExPASy TrEMBL
Match: A0A1S4E0J3 (uncharacterized protein LOC103495379 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495379 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 6.2e-21 Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of Tan0012223 vs. ExPASy TrEMBL
Match: W9R7U4 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_011398 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.1e-20 Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of Tan0012223 vs. TAIR 10
Match: AT5G50011.1 (conserved peptide upstream open reading frame 37 ) HSP 1 Score: 90.5 bits (223), Expect = 4.4e-19 Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 0
BLAST of Tan0012223 vs. TAIR 10
Match: AT5G09461.1 (conserved peptide upstream open reading frame 43 ) HSP 1 Score: 82.8 bits (203), Expect = 9.1e-17 Identity = 38/54 (70.37%), Postives = 45/54 (83.33%), Query Frame = 0
BLAST of Tan0012223 vs. TAIR 10
Match: AT5G64341.1 (conserved peptide upstream open reading frame 40 ) HSP 1 Score: 81.6 bits (200), Expect = 2.0e-16 Identity = 36/53 (67.92%), Postives = 43/53 (81.13%), Query Frame = 0
BLAST of Tan0012223 vs. TAIR 10
Match: AT1G29951.1 (conserved peptide upstream open reading frame 35 ) HSP 1 Score: 40.4 bits (93), Expect = 5.2e-04 Identity = 18/23 (78.26%), Postives = 20/23 (86.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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