Tan0012198 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGACCTGGAGAAACTTCCTGAAGAAGAGGACCTTTACTGGCGTCAAAGGTCGCACGAAGACTAGGTAAAATGGGGAGACCGAAATACCAAATGGTTCCACATTAGGGCATCCGCGAGGAAAAAACAGAACCACATTAAAGGTCTTTTCAACTCCTCGGGAGATTGGGTTACAAATGAGAGTGAGATAGGACAGTTGGCTACCGCTTACTTTGAAAATTTGTTTACTTCAAACCCGCAAGCACTTGAAGCAACTGAAAAAGTTATTGACATGATATCACCAACAAATGACAAGGAGACAAATTCTTCACTTTTAATGGATTTTACTAGGGATGAAATTGAGGGTGTCCTAAAGAGTATGAACCCTACTAAAGCTCCGGGGTCGGATGGAGTCCATGCGGGTTTCTACAAGGAATATTGGAGTATAGTCGGAGACAATATTACAGATCTGTCTAAGCTGTTTGAATGAGAATAGTGACCTACGAAAGTTGAACCACACTTGTTTAGTCCTAATCCCCAAAACTCAACATCCGAGTAAGATGGAGGATTTTCGACCAATTAGTCTGTGCAATGTGGTTTATAAGATAATCTCCAAATGTCTGGCTAATAGGTTAAAAAATGTCTTAAACCAAGTTATCTCCTTAGAGCAATCAACTTTCATCTCCGATAGGTTAATTTCTGATAATGCTCTTATTGGTTTTGAATGTTTGCACGCAATCAGAAGTAAACGCAAAGGAAAGATGGGATCAATAGCTATGAAACTCGACATGTGTAAGGCTTATGACAGGGTGGAATGGAACTATCTGCACAGGATAATGCTTCGTATGGGTTTTGATATGAACTGTGTTGAAACTGTCAGTTTCTCAATCTTGTTGAACGGTAGACCACAAGAGCCCTCTTACCCAAAAAGAGGTATGCGGCAGGGAGACCCTCTTTCTCCTTATCTATTTATACTGTGTGTTGAAGGTTTTTGTGCATTGCTTTATAGAGAACAAAGCCTTAAGAATTTCTGTGGATTAAAGATTAATTGTTTTTGTCCTATAATTTCACACATCTTCTATGCAGATGATAACATTATCTTCTTTAGGGCACACAATCAAGACATCCAAACAATCAAAGGCGTGTTGGACTGTTATGAACAGGCTTCGGGGCAGACAGTTAACTTTGAAAAATCAACCTTTGTGGTTAGTAAAAATACGAAGGCAAACATGGTAGAATTGATAAAGAGCACCTTCAAGGTTGATTGTAGAGATTCTTTGGGTTGTTATTTAGGACTCCCGTCTCAGACCTCCAAGCATAAGTCTCAAGTCTTTAGAACAATCAAAGATCGCATGTGGAAGGTGCTCCAGAGTTGGAAAGGTAAGTTTTTCTCTTATGGAGGGAGAGAGGCCCTTATTAAAGCAGTGGCTCAAGCCATTCCGGTGTATACGACGAGTTGTTTCAAGCTTCCTAAGAGTCTCTGTGCTGAACTGAATTCGATTTGCGCCAAATTTTGGTGGGGCGCTAACGAAAGAAGGCGAAAAATTCATTGGCAAAGCTAGACGAGACTGTGTATTCCCAAGGAGGCAAGGGGCATGGGTTTCAGAGACATACATTTGTTCAACCAGGCAATGTTGGCAAAGCAGGGCTGGCGTCTTCTTCGAAAGCCCGATAGTATTCTTTATCGACTGCTTAGGGGAAGATATTTTAAAACAGGAAATTTTCTAAAAGCAACTCTCGGTTCTAATCCATCTTTTACATGGCGTAGCATCCTTTGGGGTCAGGATTTGTTTAGAGAAGAGTACAGATGGAAGATTGGAAATGGATGTCAGATCAGTATATTTAATGATCCATGGCTCACGGTGGAAGGTCGGCAGCACCCGATGATGGTGAGTCCCGAACTGGCTCAAAGCACGATTCGTAGTCTGTTAAAAGAAGACGGGGAGTGGGACGTTGATAAGATCCGAAGGTGTTTCCAGGAAGATGATGTTGGTAATATTCTCCAAATCCCACGTTACGGGATACATAATAATGACGAAATTGTTTTGGAAGTATAA ATGGCGGACCTGGAGAAACTTCCTGAAGAAGAGGACCTTTACTGGCGTCAAAGCATCCTTTGGGGTCAGGATTTGTTTAGAGAAGAGTACAGATGGAAGATTGGAAATGGATGTCAGATCAGTATATTTAATGATCCATGGCTCACGGTGGAAGGTCGGCAGCACCCGATGATGGTGAGTCCCGAACTGGCTCAAAGCACGATTCGTAGTCTGTTAAAAGAAGACGGGGAGTGGGACGTTGATAAGATCCGAAGGTGTTTCCAGGAAGATGATGTTGGTAATATTCTCCAAATCCCACGTTACGGGATACATAATAATGACGAAATTGTTTTGGAAGTATAA ATGGCGGACCTGGAGAAACTTCCTGAAGAAGAGGACCTTTACTGGCGTCAAAGCATCCTTTGGGGTCAGGATTTGTTTAGAGAAGAGTACAGATGGAAGATTGGAAATGGATGTCAGATCAGTATATTTAATGATCCATGGCTCACGGTGGAAGGTCGGCAGCACCCGATGATGGTGAGTCCCGAACTGGCTCAAAGCACGATTCGTAGTCTGTTAAAAGAAGACGGGGAGTGGGACGTTGATAAGATCCGAAGGTGTTTCCAGGAAGATGATGTTGGTAATATTCTCCAAATCCCACGTTACGGGATACATAATAATGACGAAATTGTTTTGGAAGTATAA MADLEKLPEEEDLYWRQSILWGQDLFREEYRWKIGNGCQISIFNDPWLTVEGRQHPMMVSPELAQSTIRSLLKEDGEWDVDKIRRCFQEDDVGNILQIPRYGIHNNDEIVLEV Homology
BLAST of Tan0012198 vs. NCBI nr
Match: XP_022155286.1 (uncharacterized protein LOC111022423 [Momordica charantia]) HSP 1 Score: 83.2 bits (204), Expect = 1.6e-12 Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 0
BLAST of Tan0012198 vs. NCBI nr
Match: XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis]) HSP 1 Score: 73.6 bits (179), Expect = 1.3e-09 Identity = 35/96 (36.46%), Postives = 54/96 (56.25%), Query Frame = 0
BLAST of Tan0012198 vs. NCBI nr
Match: XP_030502376.1 (uncharacterized protein LOC115717528 [Cannabis sativa]) HSP 1 Score: 72.0 bits (175), Expect = 3.7e-09 Identity = 34/109 (31.19%), Postives = 56/109 (51.38%), Query Frame = 0
BLAST of Tan0012198 vs. NCBI nr
Match: XP_030494695.1 (uncharacterized protein LOC115710475 [Cannabis sativa]) HSP 1 Score: 71.6 bits (174), Expect = 4.8e-09 Identity = 35/98 (35.71%), Postives = 53/98 (54.08%), Query Frame = 0
BLAST of Tan0012198 vs. NCBI nr
Match: PKA49974.1 (Putative ribonuclease H protein [Apostasia shenzhenica]) HSP 1 Score: 71.2 bits (173), Expect = 6.3e-09 Identity = 38/97 (39.18%), Postives = 52/97 (53.61%), Query Frame = 0
BLAST of Tan0012198 vs. ExPASy TrEMBL
Match: A0A6J1DRA0 (uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022423 PE=4 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 7.7e-13 Identity = 40/105 (38.10%), Postives = 58/105 (55.24%), Query Frame = 0
BLAST of Tan0012198 vs. ExPASy TrEMBL
Match: A0A803QDR8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 2.5e-11 Identity = 39/111 (35.14%), Postives = 56/111 (50.45%), Query Frame = 0
BLAST of Tan0012198 vs. ExPASy TrEMBL
Match: A0A803PV88 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 3.6e-10 Identity = 35/98 (35.71%), Postives = 53/98 (54.08%), Query Frame = 0
BLAST of Tan0012198 vs. ExPASy TrEMBL
Match: A0A803NFC8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.8e-09 Identity = 34/109 (31.19%), Postives = 56/109 (51.38%), Query Frame = 0
BLAST of Tan0012198 vs. ExPASy TrEMBL
Match: A0A2I0A354 (Ribonuclease H protein OS=Apostasia shenzhenica OX=1088818 GN=AXF42_Ash017513 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 3.0e-09 Identity = 38/97 (39.18%), Postives = 52/97 (53.61%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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