Tan0012176 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATAAATAGAACCACAGCCCTAGAATCTCTCTCACACTTCATCCACATGGCTGAGTCTTACGAATTTCAGCCACAAGACGAGGCCCAAGCCCTCCTCCGCTCCGGCCAGCGACGGGCGTCTCGCCGGTGGATCCATCTGCGGCGTAAGAAGCTGCCGACGGTCCGACTTGGCGGCGGAAGGGCGCCGCGAACGGTGGCGCTTTGGAGGTCGATTCGAATCAGAAAGTGGCTGATGAAGATCCGATGCGATTGTATGGTGAAGAAGCTGAATCAATTGTTGGGAAAAGACATTGCTGGTTTCGATGCTTTTTTTAAAAGGATTCTGATGGAGATCTCTTTGGCCGTTCCTGTTCTTGGTGCTTCTCTCTCTATTTAAGCTTGCCATTTTTAAGTTTAATTTGAATCCGTAACCTCTGAATCGATAATGTATATTTTACTTTATGTTTAGATTAAGTAGAATGTAAAAATTATTTAGTTTTAATTGTGAATAATTATATATAAATTTCAGTTTCATACCTATGAGTCAGATTTAATAATCATTTGCATTTTAATTTTTG TATAAATAGAACCACAGCCCTAGAATCTCTCTCACACTTCATCCACATGGCTGAGTCTTACGAATTTCAGCCACAAGACGAGGCCCAAGCCCTCCTCCGCTCCGGCCAGCGACGGGCGTCTCGCCGGTGGATCCATCTGCGGCGTAAGAAGCTGCCGACGGTCCGACTTGGCGGCGGAAGGGCGCCGCGAACGGTGGCGCTTTGGAGGTCGATTCGAATCAGAAAGTGGCTGATGAAGATCCGATGCGATTGTATGGTGAAGAAGCTGAATCAATTGTTGGGAAAAGACATTGCTGGTTTCGATGCTTTTTTTAAAAGGATTCTGATGGAGATCTCTTTGGCCGTTCCTGTTCTTGGTGCTTCTCTCTCTATTTAAGCTTGCCATTTTTAAGTTTAATTTGAATCCGTAACCTCTGAATCGATAATGTATATTTTACTTTATGTTTAGATTAAGTAGAATGTAAAAATTATTTAGTTTTAATTGTGAATAATTATATATAAATTTCAGTTTCATACCTATGAGTCAGATTTAATAATCATTTGCATTTTAATTTTTG ATGGCTGAGTCTTACGAATTTCAGCCACAAGACGAGGCCCAAGCCCTCCTCCGCTCCGGCCAGCGACGGGCGTCTCGCCGGTGGATCCATCTGCGGCGTAAGAAGCTGCCGACGGTCCGACTTGGCGGCGGAAGGGCGCCGCGAACGGTGGCGCTTTGGAGGTCGATTCGAATCAGAAAGTGGCTGATGAAGATCCGATGCGATTGTATGGTGAAGAAGCTGAATCAATTGTTGGGAAAAGACATTGCTGGTTTCGATGCTTTTTTTAAAAGGATTCTGATGGAGATCTCTTTGGCCGTTCCTGTTCTTGGTGCTTCTCTCTCTATTTAA MAESYEFQPQDEAQALLRSGQRRASRRWIHLRRKKLPTVRLGGGRAPRTVALWRSIRIRKWLMKIRCDCMVKKLNQLLGKDIAGFDAFFKRILMEISLAVPVLGASLSI Homology
BLAST of Tan0012176 vs. NCBI nr
Match: KAG6593556.1 (hypothetical protein SDJN03_13032, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 156.8 bits (395), Expect = 1.1e-34 Identity = 82/115 (71.30%), Postives = 89/115 (77.39%), Query Frame = 0
BLAST of Tan0012176 vs. NCBI nr
Match: KAG7013982.1 (hypothetical protein SDJN02_24152, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 148.7 bits (374), Expect = 3.0e-32 Identity = 77/109 (70.64%), Postives = 84/109 (77.06%), Query Frame = 0
BLAST of Tan0012176 vs. NCBI nr
Match: KAG6575440.1 (hypothetical protein SDJN03_26079, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 148.7 bits (374), Expect = 3.0e-32 Identity = 77/109 (70.64%), Postives = 84/109 (77.06%), Query Frame = 0
BLAST of Tan0012176 vs. NCBI nr
Match: KAA0059393.1 (hypothetical protein E6C27_scaffold242G001190 [Cucumis melo var. makuwa] >TYK03934.1 hypothetical protein E5676_scaffold347G001310 [Cucumis melo var. makuwa]) HSP 1 Score: 127.5 bits (319), Expect = 7.1e-26 Identity = 72/116 (62.07%), Postives = 85/116 (73.28%), Query Frame = 0
BLAST of Tan0012176 vs. NCBI nr
Match: KAE8646502.1 (hypothetical protein Csa_015773 [Cucumis sativus]) HSP 1 Score: 115.9 bits (289), Expect = 2.1e-22 Identity = 67/117 (57.26%), Postives = 82/117 (70.09%), Query Frame = 0
BLAST of Tan0012176 vs. ExPASy TrEMBL
Match: A0A5A7UTZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001310 PE=4 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 3.4e-26 Identity = 72/116 (62.07%), Postives = 85/116 (73.28%), Query Frame = 0
BLAST of Tan0012176 vs. ExPASy TrEMBL
Match: A0A0A0KCH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448920 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 5.5e-24 Identity = 70/117 (59.83%), Postives = 84/117 (71.79%), Query Frame = 0
BLAST of Tan0012176 vs. ExPASy TrEMBL
Match: A0A6J1GVZ8 (uncharacterized protein LOC111458050 OS=Cucurbita moschata OX=3662 GN=LOC111458050 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.5e-08 Identity = 48/116 (41.38%), Postives = 69/116 (59.48%), Query Frame = 0
BLAST of Tan0012176 vs. ExPASy TrEMBL
Match: A0A1S4CG75 (uncharacterized protein LOC107818456 OS=Nicotiana tabacum OX=4097 GN=LOC107818456 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 2.1e-07 Identity = 45/95 (47.37%), Postives = 59/95 (62.11%), Query Frame = 0
BLAST of Tan0012176 vs. ExPASy TrEMBL
Match: A0A5N6QI76 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_003523 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 6.1e-07 Identity = 45/94 (47.87%), Postives = 60/94 (63.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|