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Tan0012170 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAGAGCAAACCCATATTCCTCAAGAATTATTGCTCATCAACAAGAAATGCATGGGAAAGTCCCAACTAAAAGGCAAGTTTGGGCTCTGTAAACTGCCCAAGCACGGATAATGAATGATATTTTTATGTCATTTCATCCATTTCTCTTCCTTTTTTCAGTTCAAAATGTTCTATAAATTCCTACACTCACAATTCCCAATTCCCATCAAAGAAATCATCCTTTAATACAAAAATCATGGGTTCTTTGGCTTTCAAATTCCTCTGGCTGGTGGTTCTGTCTGCACTAATTTGGGGCTCAGAGCCCAGAAGCCTTGTTAGCAATGGGGGAGAGATTGGAAACGAAAAGACAGGGTATTTCCAGTTCTTTCCTGGTTATGGCGGTGGAGGCTTTGGTGGCGGTGGTGGCGGCGGCGGCGGTGGATTAGGTGGTGGTTCGGGCTTTGGCAGTGGAGGTGGAGGGGGGTTTGGGACTGGAATTGGGGGGCTCGGCGGTGGAGGATTCGGCGGAGGTGGTGGCGGTGGCAGTGGCGTTTTAGGCAGTGGAGCGGGTGGAGGAGCTGGTGGTGGATTTGGAGGTGGACTGCCTTGA AAAAAGAGCAAACCCATATTCCTCAAGAATTATTGCTCATCAACAAGAAATGCATGGGAAAGTCCCAACTAAAAGGCAAGTTTGGGCTCTGTAAACTGCCCAAGCACGGATAATGAATGATATTTTTATGTCATTTCATCCATTTCTCTTCCTTTTTTCAGTTCAAAATGTTCTATAAATTCCTACACTCACAATTCCCAATTCCCATCAAAGAAATCATCCTTTAATACAAAAATCATGGGTTCTTTGGCTTTCAAATTCCTCTGGCTGGTGGTTCTGTCTGCACTAATTTGGGGCTCAGAGCCCAGAAGCCTTGTTAGCAATGGGGGAGAGATTGGAAACGAAAAGACAGGGTATTTCCAGTTCTTTCCTGGTTATGGCGGTGGAGGCTTTGGTGGCGGTGGTGGCGGCGGCGGCGGTGGATTAGGTGGTGGTTCGGGCTTTGGCAGTGGAGGTGGAGGGGGGTTTGGGACTGGAATTGGGGGGCTCGGCGGTGGAGGATTCGGCGGAGGTGGTGGCGGTGGCAGTGGCGTTTTAGGCAGTGGAGCGGGTGGAGGAGCTGGTGGTGGATTTGGAGGTGGACTGCCTTGA ATGGGTTCTTTGGCTTTCAAATTCCTCTGGCTGGTGGTTCTGTCTGCACTAATTTGGGGCTCAGAGCCCAGAAGCCTTGTTAGCAATGGGGGAGAGATTGGAAACGAAAAGACAGGGTATTTCCAGTTCTTTCCTGGTTATGGCGGTGGAGGCTTTGGTGGCGGTGGTGGCGGCGGCGGCGGTGGATTAGGTGGTGGTTCGGGCTTTGGCAGTGGAGGTGGAGGGGGGTTTGGGACTGGAATTGGGGGGCTCGGCGGTGGAGGATTCGGCGGAGGTGGTGGCGGTGGCAGTGGCGTTTTAGGCAGTGGAGCGGGTGGAGGAGCTGGTGGTGGATTTGGAGGTGGACTGCCTTGA MGSLAFKFLWLVVLSALIWGSEPRSLVSNGGEIGNEKTGYFQFFPGYGGGGFGGGGGGGGGGLGGGSGFGSGGGGGFGTGIGGLGGGGFGGGGGGGSGVLGSGAGGGAGGGFGGGLP Homology
BLAST of Tan0012170 vs. NCBI nr
Match: XP_038895952.1 (glycine-rich cell wall structural protein-like [Benincasa hispida]) HSP 1 Score: 116.3 bits (290), Expect = 1.8e-22 Identity = 102/123 (82.93%), Postives = 107/123 (86.99%), Query Frame = 0
BLAST of Tan0012170 vs. NCBI nr
Match: XP_022994117.1 (glycine-rich protein 5 [Cucurbita maxima]) HSP 1 Score: 109.4 bits (272), Expect = 2.1e-20 Identity = 100/123 (81.30%), Postives = 103/123 (83.74%), Query Frame = 0
BLAST of Tan0012170 vs. NCBI nr
Match: XP_011648421.1 (glycine-rich cell wall structural protein [Cucumis sativus] >KGN64508.1 hypothetical protein Csa_013856 [Cucumis sativus]) HSP 1 Score: 109.0 bits (271), Expect = 2.8e-20 Identity = 99/121 (81.82%), Postives = 104/121 (85.95%), Query Frame = 0
BLAST of Tan0012170 vs. NCBI nr
Match: XP_023542188.1 (glycine-rich protein 23 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 106.3 bits (264), Expect = 1.8e-19 Identity = 101/126 (80.16%), Postives = 104/126 (82.54%), Query Frame = 0
BLAST of Tan0012170 vs. NCBI nr
Match: XP_008446362.1 (PREDICTED: glycine-rich cell wall structural protein [Cucumis melo] >ADN34062.1 hypothetical protein [Cucumis melo subsp. melo] >KAA0056845.1 glycine-rich cell wall structural protein [Cucumis melo var. makuwa] >TYJ99348.1 glycine-rich cell wall structural protein [Cucumis melo var. makuwa]) HSP 1 Score: 104.4 bits (259), Expect = 6.9e-19 Identity = 98/121 (80.99%), Postives = 103/121 (85.12%), Query Frame = 0
BLAST of Tan0012170 vs. ExPASy TrEMBL
Match: A0A6J1JUT9 (glycine-rich protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111489946 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 1.0e-20 Identity = 100/123 (81.30%), Postives = 103/123 (83.74%), Query Frame = 0
BLAST of Tan0012170 vs. ExPASy TrEMBL
Match: A0A0A0LS00 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G062340 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 1.4e-20 Identity = 99/121 (81.82%), Postives = 104/121 (85.95%), Query Frame = 0
BLAST of Tan0012170 vs. ExPASy TrEMBL
Match: A0A5D3BMG3 (Glycine-rich cell wall structural protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005650 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 3.3e-19 Identity = 98/121 (80.99%), Postives = 103/121 (85.12%), Query Frame = 0
BLAST of Tan0012170 vs. ExPASy TrEMBL
Match: E5GC63 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 3.3e-19 Identity = 98/121 (80.99%), Postives = 103/121 (85.12%), Query Frame = 0
BLAST of Tan0012170 vs. ExPASy TrEMBL
Match: A0A1S3BEW4 (glycine-rich cell wall structural protein OS=Cucumis melo OX=3656 GN=LOC103489125 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 3.3e-19 Identity = 98/121 (80.99%), Postives = 103/121 (85.12%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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