Tan0012162 (gene) Snake gourd v1

Overview


Name	Tan0012162
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	dehydration-responsive element-binding protein 1B-like
Location	LG08: 69584764 .. 69585375 (+)
RNA-Seq Expression	Tan0012162
Synteny	Tan0012162

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATTCTTCATCTTCCAGCTCCACCAACGACCACCTTACGCCGCCGGTGGCGGCGAAGCGGAAGGCCGGCCGGAAGAAGTTTCAGGAGACCCGCCACCCGATTTACAAAGGCGTCCGCCAGAGAAATTGTAGGTGGGTCTGCGAGCTCCGGCAGCCCAATAAAAAATCAAGCTTTTGGGTCGGAACTTTTTGCAGCCCGAAAATGGCGGCGGTGGCGTACGACGTCGTTGCGTTGGCCATTAAAGGTGAGTCTGCAGCACTCAATTTTCCTGAGTTGGCTCATTTATTTCCACGAGTTACGTCGTCGTTGTCGTCCATAAACGACATACGAACGATGGCAATTGAGACGGCGGAGGCGTTTACATTAAGTGACATGTTGTCGTTTTCGTCATCGTCTTCGTCTTCGTCGTCCTTGATGTTGGAGGAGAAAGTGATACCGGAAGTTTTTATGGATAGGTTAGTTGTGGATGAGGAGGAGGTGTTTAACATGCCGGCGATAATCGCCGATATGGCGGAGGGGTTGATTTTGACACCGCCGGGGATGAAGAGGGGATTTAGTTGGGAGGAATATGAAAATACGGTAGAGTTGTCGCTGTGGAATGACGAGTGA

mRNA sequence

ATGCATTCTTCATCTTCCAGCTCCACCAACGACCACCTTACGCCGCCGGTGGCGGCGAAGCGGAAGGCCGGCCGGAAGAAGTTTCAGGAGACCCGCCACCCGATTTACAAAGGCGTCCGCCAGAGAAATTGTAGGTGGGTCTGCGAGCTCCGGCAGCCCAATAAAAAATCAAGCTTTTGGGTCGGAACTTTTTGCAGCCCGAAAATGGCGGCGGTGGCGTACGACGTCGTTGCGTTGGCCATTAAAGGTGAGTCTGCAGCACTCAATTTTCCTGAGTTGGCTCATTTATTTCCACGAGTTACGTCGTCGTTGTCGTCCATAAACGACATACGAACGATGGCAATTGAGACGGCGGAGGCGTTTACATTAAGTGACATGTTGTCGTTTTCGTCATCGTCTTCGTCTTCGTCGTCCTTGATGTTGGAGGAGAAAGTGATACCGGAAGTTTTTATGGATAGGTTAGTTGTGGATGAGGAGGAGGTGTTTAACATGCCGGCGATAATCGCCGATATGGCGGAGGGGTTGATTTTGACACCGCCGGGGATGAAGAGGGGATTTAGTTGGGAGGAATATGAAAATACGGTAGAGTTGTCGCTGTGGAATGACGAGTGA

Coding sequence (CDS)

ATGCATTCTTCATCTTCCAGCTCCACCAACGACCACCTTACGCCGCCGGTGGCGGCGAAGCGGAAGGCCGGCCGGAAGAAGTTTCAGGAGACCCGCCACCCGATTTACAAAGGCGTCCGCCAGAGAAATTGTAGGTGGGTCTGCGAGCTCCGGCAGCCCAATAAAAAATCAAGCTTTTGGGTCGGAACTTTTTGCAGCCCGAAAATGGCGGCGGTGGCGTACGACGTCGTTGCGTTGGCCATTAAAGGTGAGTCTGCAGCACTCAATTTTCCTGAGTTGGCTCATTTATTTCCACGAGTTACGTCGTCGTTGTCGTCCATAAACGACATACGAACGATGGCAATTGAGACGGCGGAGGCGTTTACATTAAGTGACATGTTGTCGTTTTCGTCATCGTCTTCGTCTTCGTCGTCCTTGATGTTGGAGGAGAAAGTGATACCGGAAGTTTTTATGGATAGGTTAGTTGTGGATGAGGAGGAGGTGTTTAACATGCCGGCGATAATCGCCGATATGGCGGAGGGGTTGATTTTGACACCGCCGGGGATGAAGAGGGGATTTAGTTGGGAGGAATATGAAAATACGGTAGAGTTGTCGCTGTGGAATGACGAGTGA

Protein sequence

MHSSSSSSTNDHLTPPVAAKRKAGRKKFQETRHPIYKGVRQRNCRWVCELRQPNKKSSFWVGTFCSPKMAAVAYDVVALAIKGESAALNFPELAHLFPRVTSSLSSINDIRTMAIETAEAFTLSDMLSFSSSSSSSSSLMLEEKVIPEVFMDRLVVDEEEVFNMPAIIADMAEGLILTPPGMKRGFSWEEYENTVELSLWNDE

Homology

[Close]

BLAST of Tan0012162 vs. ExPASy Swiss-Prot
Match: P93835 (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=DREB1B PE=1 SV=2)

HSP 1 Score: 129.0 bits (323), Expect = 6.0e-29
Identity = 79/188 (42.02%), Postives = 119/188 (63.30%), Query Frame = 0


Query: 20  KRKAGRKKFQETRHPIYKGVRQRNC-RWVCELRQPNKKSSFWVGTFCSPKMAAVAYDVVA 79
           K+ AGRKKF+ETRHPIY+GVRQRN  +WV E+R+PNKK+  W+GTF + +MAA A+DV A
Sbjct: 32  KKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAA 91

Query: 80  LAIKGESAALNFPELAHLFPRVTSSLSSINDIRTMAIETAEAFTLSDMLSFSSSSSSSSS 139
           LA++G SA LNF + A    R+  S +   DI+  A E A AF          +++++  
Sbjct: 92  LALRGRSACLNFADSAWRL-RIPES-TCAKDIQKAAAEAALAF----QDETCDTTTTNHG 151

Query: 140 LMLEEKVI-----PEVFMDRLVVDEEEVFNMPAIIADMAEGLILTPPGMKRGFSWEEYEN 199
           L +EE ++     PE       +DEE +F MP ++ +MAEG++L PP ++   +++  E 
Sbjct: 152 LDMEETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNYDG-EG 211

Query: 200 TVELSLWN 202
             ++SLW+
Sbjct: 212 DGDVSLWS 212

[Close]

BLAST of Tan0012162 vs. ExPASy Swiss-Prot
Match: Q9M0L0 (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=DREB1A PE=1 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 3.0e-28
Identity = 81/204 (39.71%), Postives = 125/204 (61.27%), Query Frame = 0


Query: 2   HSSSSSSTNDHLTPPVAA---KRKAGRKKFQETRHPIYKGVRQRNC-RWVCELRQPNKKS 61
           + SS SS  D++ P +A+   K+ AGRKKF+ETRHPIY+GVR+RN  +WVCE+R+PNKK+
Sbjct: 15  YESSVSSGGDYI-PTLASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKWVCEVREPNKKT 74

Query: 62  SFWVGTFCSPKMAAVAYDVVALAIKGESAALNFPELAHLFPRVTSSLSSINDIRTMAIET 121
             W+GTF + +MAA A+DV ALA++G SA LNF + A    R+  S +   DI+  A E 
Sbjct: 75  RIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRL-RIPES-TCAKDIQKAAAEA 134

Query: 122 AEAFTLSDMLSFSSSSSSSSSLMLEEKVIPEVFMDRLVVDEEEVFNMPAIIADMAEGLIL 181
           A AF      + +         ++E     E   +   + +E +F MP+++A+MAEG++L
Sbjct: 135 ALAFQDEMCDATTDHGFDMEETLVEAIYTAEQSENAFYMHDEAMFEMPSLLANMAEGMLL 194

Query: 182 TPPGMKRGFSWEEYENTVELSLWN 202
             P ++   + E   +  ++SLW+
Sbjct: 195 PLPSVQWNHNHEVDGDDDDVSLWS 215

[Close]

BLAST of Tan0012162 vs. ExPASy Swiss-Prot
Match: Q9SYS6 (Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=DREB1C PE=1 SV=2)

HSP 1 Score: 124.0 bits (310), Expect = 1.9e-27
Identity = 81/206 (39.32%), Postives = 126/206 (61.17%), Query Frame = 0


Query: 2   HSSSSSSTNDHLTPPVAA---KRKAGRKKFQETRHPIYKGVRQRNC-RWVCELRQPNKKS 61
           + S  SS  D+ +P +A    K+ AGRKKF+ETRHPIY+GVRQRN  +WVCELR+PNKK+
Sbjct: 15  YESPVSSGGDY-SPKLATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCELREPNKKT 74

Query: 62  SFWVGTFCSPKMAAVAYDVVALAIKGESAALNFPELAHLFPRVTSSLSSINDIRTMAIET 121
             W+GTF + +MAA A+DV A+A++G SA LNF + A    R+  S +   +I+  A E 
Sbjct: 75  RIWLGTFQTAEMAARAHDVAAIALRGRSACLNFADSAWRL-RIPES-TCAKEIQKAAAEA 134

Query: 122 AEAFTLSDMLSFSSSSS--SSSSLMLEEKVIPEVFMDRLVVDEEEVFNMPAIIADMAEGL 181
           A  F   +M   ++ +        ++E    PE   D   +DEE +  M +++ +MAEG+
Sbjct: 135 ALNFQ-DEMCHMTTDAHGLDMEETLVEAIYTPEQSQDAFYMDEEAMLGMSSLLDNMAEGM 194

Query: 182 ILTPPGMKRGFSWEEYENTVELSLWN 202
           +L  P ++  +++ + E   ++SLW+
Sbjct: 195 LLPSPSVQWNYNF-DVEGDDDVSLWS 215

[Close]

BLAST of Tan0012162 vs. ExPASy Swiss-Prot
Match: Q9FJ93 (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=3702 GN=DREB1D PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.9e-27
Identity = 80/208 (38.46%), Postives = 121/208 (58.17%), Query Frame = 0


Query: 5   SSSSTNDHLTPPVAA---KRKAGRKKFQETRHPIYKGVRQRNC-RWVCELRQPNKKSSFW 64
           S  S +   +P +A+   K++AGRKKF+ETRHPIY+GVRQRN  +WVCE+R+PNKKS  W
Sbjct: 20  SPVSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGVRQRNSGKWVCEVREPNKKSRIW 79

Query: 65  VGTFCSPKMAAVAYDVVALAIKGESAALNFPELAH--LFPRVTSSLSSINDIRTMAIETA 124
           +GTF + +MAA A+DV ALA++G SA LNF + A     P  T       +I+  A E A
Sbjct: 80  LGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPETTCP----KEIQKAASEAA 139

Query: 125 EAF-----TLSDMLSFSSSSSSSSSLMLEEKVIPEVFMDRLVVDEEEVFNMPAIIADMAE 184
            AF     T     +  +  ++   +   E+   E       +D+E +  MP    +MAE
Sbjct: 140 MAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFYMDDEALLGMPNFFENMAE 199

Query: 185 GLILTPPGMKRGFSWEEYENTVELSLWN 202
           G++L PP +  G++  +++   ++SLW+
Sbjct: 200 GMLLPPPEV--GWNHNDFDGVGDVSLWS 221

[Close]

BLAST of Tan0012162 vs. ExPASy Swiss-Prot
Match: A2WZI4 (Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. indica OX=39946 GN=DREB1F PE=2 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.3e-27
Identity = 81/211 (38.39%), Postives = 116/211 (54.98%), Query Frame = 0


Query: 4   SSSSSTNDHLTPPVAAKRKAGRKKFQETRHPIYKGVRQR--NCRWVCELRQPNKKSSFWV 63
           SS    + H  PP   KR+AGRKKF+ETRHP+Y+GVR R    RWVCE+R+P  ++  W+
Sbjct: 18  SSPGGGHHHRLPP---KRRAGRKKFRETRHPVYRGVRARAGGSRWVCEVREPQAQARIWL 77

Query: 64  GTFCSPKMAAVAYDVVALAIKGE-SAALNFPELAHLFPRVTSSLSSINDIRTMAIETAEA 123
           GT+ +P+MAA A+DV A+A++GE  A LNFP+     PR  +  +S  DIR  A + AE 
Sbjct: 78  GTYPTPEMAARAHDVAAIALRGERGAELNFPDSPSTLPRART--ASPEDIRLAAAQAAEL 137

Query: 124 FTLSD---MLSFSSSSSSSSSLMLEEKVIPEVFMDRLVVDEEEVFNMPAIIADMAEGLIL 183
           +        L       +S          P      + VDE+ +F+MP +I DMA G++L
Sbjct: 138 YRRPPPPLALPEDPQEGTSGGGATATSGRPAA----VFVDEDAIFDMPGLIDDMARGMML 197

Query: 184 TPPGMKRGF-SWEEYENT-----VELSLWND 203
           TPP + R    W   ++      ++  LW D
Sbjct: 198 TPPAIGRSLDDWAAIDDDDDHYHMDYKLWMD 219

[Close]

BLAST of Tan0012162 vs. NCBI nr
Match: KAG7017431.1 (Dehydration-responsive element-binding protein 1B, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 310.1 bits (793), Expect = 1.4e-80
Identity = 164/206 (79.61%), Postives = 176/206 (85.44%), Query Frame = 0


Query: 1   MHSSSSSSTNDHLTP---PVAAKRKAGRKKFQETRHPIYKGVRQRNCRWVCELRQPNKKS 60
           M SSSSSSTN+HL P     + KRKAGRKKFQETRHPIYKGVRQRN +WV ELR PNK S
Sbjct: 1   MPSSSSSSTNEHLPPSQKTASTKRKAGRKKFQETRHPIYKGVRQRNGKWVSELRWPNKNS 60

Query: 61  SFWVGTFCSPKMAAVAYDVVALAIKGESAALNFPELAHLFPRVTSSLSSINDIRTMAIET 120
           +FWVGTFC+P+MAAVAYDVVAL IKGESA LNFP   HLFPRVTSS SSINDIRTMA+E 
Sbjct: 61  TFWVGTFCTPEMAAVAYDVVALTIKGESAPLNFPNWTHLFPRVTSSSSSINDIRTMAVEA 120

Query: 121 AEAFTLSDMLSFSSSSSSSSSLMLEEKVIPEVFMDRLVVDEEEVFNMPAIIADMAEGLIL 180
           AEAFT S+ LS  SSSS  SSLM EE VIPEV  DRLV+DEEEVFNMPAIIA MAEGLIL
Sbjct: 121 AEAFTSSNRLSSLSSSSLCSSLMSEEMVIPEVLTDRLVLDEEEVFNMPAIIAGMAEGLIL 180

Query: 181 TPPGMKRGFSWEEYENTVELSLWNDE 204
           TPPGMKRGF+WEEYE+TVELSLWND+
Sbjct: 181 TPPGMKRGFNWEEYEDTVELSLWNDD 206

[Close]

BLAST of Tan0012162 vs. NCBI nr
Match: XP_023528801.1 (dehydration-responsive element-binding protein 1B-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 309.3 bits (791), Expect = 2.5e-80
Identity = 163/206 (79.13%), Postives = 176/206 (85.44%), Query Frame = 0


Query: 1   MHSSSSSSTNDHLTP---PVAAKRKAGRKKFQETRHPIYKGVRQRNCRWVCELRQPNKKS 60
           M SSSSSSTN+HL P     + KRKAGRKKFQETRHPIYKGVRQRN +WV ELR PNK S
Sbjct: 1   MPSSSSSSTNEHLPPSQKTASTKRKAGRKKFQETRHPIYKGVRQRNGKWVSELRWPNKNS 60

Query: 61  SFWVGTFCSPKMAAVAYDVVALAIKGESAALNFPELAHLFPRVTSSLSSINDIRTMAIET 120
           +FWVGTFCSP+MAAVAYDVVAL IKGESA LNFP   HLFPRVTSS SSINDIRTMA+E 
Sbjct: 61  TFWVGTFCSPEMAAVAYDVVALTIKGESAPLNFPNWTHLFPRVTSSSSSINDIRTMAVEA 120

Query: 121 AEAFTLSDMLSFSSSSSSSSSLMLEEKVIPEVFMDRLVVDEEEVFNMPAIIADMAEGLIL 180
           AEAFT S+ LS  SSSS  SSL  EEKV P+V  DRLV+DEEEVFNMPAIIADMAEGLIL
Sbjct: 121 AEAFTSSNRLSSLSSSSLCSSLTSEEKVTPKVLTDRLVLDEEEVFNMPAIIADMAEGLIL 180

Query: 181 TPPGMKRGFSWEEYENTVELSLWNDE 204
           TPPGMK+GF+WEEYE+TVELSLWND+
Sbjct: 181 TPPGMKKGFNWEEYEDTVELSLWNDD 206

[Close]

BLAST of Tan0012162 vs. NCBI nr
Match: KAG6580677.1 (Dehydration-responsive element-binding protein 1B, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 307.8 bits (787), Expect = 7.1e-80
Identity = 163/206 (79.13%), Postives = 175/206 (84.95%), Query Frame = 0


Query: 1   MHSSSSSSTNDHLTP---PVAAKRKAGRKKFQETRHPIYKGVRQRNCRWVCELRQPNKKS 60
           M SSSSSSTN+HL P     + KRKAGRKKFQETRHPIYKGVRQRN +WV ELR PNK S
Sbjct: 1   MPSSSSSSTNEHLPPSQKTASTKRKAGRKKFQETRHPIYKGVRQRNGKWVSELRWPNKNS 60

Query: 61  SFWVGTFCSPKMAAVAYDVVALAIKGESAALNFPELAHLFPRVTSSLSSINDIRTMAIET 120
           +FWVGTFC+P+MAAVAYDVVAL IKGESA LNFP   HLFPRVTSS SSINDIRTMA+E 
Sbjct: 61  TFWVGTFCTPEMAAVAYDVVALTIKGESAPLNFPNWTHLFPRVTSSSSSINDIRTMAVEA 120

Query: 121 AEAFTLSDMLSFSSSSSSSSSLMLEEKVIPEVFMDRLVVDEEEVFNMPAIIADMAEGLIL 180
           AEAFT S+ LS  SSSS  SSLM EE VIPEV  DRLV+DEEEVFNMPAIIA MAEGLIL
Sbjct: 121 AEAFTSSNRLSSLSSSSLCSSLMSEEMVIPEVLTDRLVLDEEEVFNMPAIIASMAEGLIL 180

Query: 181 TPPGMKRGFSWEEYENTVELSLWNDE 204
           TPPGMKRGF+WEEYE+TVELSLWN +
Sbjct: 181 TPPGMKRGFNWEEYEDTVELSLWNHD 206

[Close]

BLAST of Tan0012162 vs. NCBI nr
Match: XP_022934612.1 (dehydration-responsive element-binding protein 1B-like [Cucurbita moschata])

HSP 1 Score: 305.4 bits (781), Expect = 3.5e-79
Identity = 162/206 (78.64%), Postives = 174/206 (84.47%), Query Frame = 0


Query: 1   MHSSSSSSTNDHLTP---PVAAKRKAGRKKFQETRHPIYKGVRQRNCRWVCELRQPNKKS 60
           M SSSSSSTN+HL P     + KRKAGRKKFQETRHPIYKGVRQRN +WV ELR PNK S
Sbjct: 1   MPSSSSSSTNEHLPPSQKTASTKRKAGRKKFQETRHPIYKGVRQRNGKWVSELRWPNKNS 60

Query: 61  SFWVGTFCSPKMAAVAYDVVALAIKGESAALNFPELAHLFPRVTSSLSSINDIRTMAIET 120
           +FWVGTFC+P+MAAVAYDVVAL IKGESA LNFP   HLFPRV SS SSINDIRTMA+E 
Sbjct: 61  TFWVGTFCTPEMAAVAYDVVALTIKGESAPLNFPNWTHLFPRVKSSSSSINDIRTMAVEA 120

Query: 121 AEAFTLSDMLSFSSSSSSSSSLMLEEKVIPEVFMDRLVVDEEEVFNMPAIIADMAEGLIL 180
           AEAFT S+ LS  SSSS  SSL  EEKVIP V  DRLV+DEEEVFNMPAIIA MAEGLIL
Sbjct: 121 AEAFTSSNRLSSLSSSSLCSSLTSEEKVIPAVLTDRLVLDEEEVFNMPAIIAGMAEGLIL 180

Query: 181 TPPGMKRGFSWEEYENTVELSLWNDE 204
           TPPGMKRGF+WEEYE+TVELSLWND+
Sbjct: 181 TPPGMKRGFNWEEYEDTVELSLWNDD 206

[Close]

BLAST of Tan0012162 vs. NCBI nr
Match: XP_022983374.1 (dehydration-responsive element-binding protein 1B-like [Cucurbita maxima])

HSP 1 Score: 304.3 bits (778), Expect = 7.9e-79
Identity = 161/206 (78.16%), Postives = 175/206 (84.95%), Query Frame = 0


Query: 1   MHSSSSSSTNDHLTP---PVAAKRKAGRKKFQETRHPIYKGVRQRNCRWVCELRQPNKKS 60
           M SSSSSSTN+HL P     + KRKAGRKKFQETRHPIYKGVRQRN +WV ELR PNK S
Sbjct: 1   MPSSSSSSTNEHLPPSQKTASTKRKAGRKKFQETRHPIYKGVRQRNGKWVSELRWPNKNS 60

Query: 61  SFWVGTFCSPKMAAVAYDVVALAIKGESAALNFPELAHLFPRVTSSLSSINDIRTMAIET 120
           +FWVGTFCSP+MAAVAYDVVAL IKGESA LNFP   HLFPRVTSS SSINDIRTMA+E 
Sbjct: 61  TFWVGTFCSPEMAAVAYDVVALTIKGESAPLNFPNWTHLFPRVTSSSSSINDIRTMAMEA 120

Query: 121 AEAFTLSDMLSFSSSSSSSSSLMLEEKVIPEVFMDRLVVDEEEVFNMPAIIADMAEGLIL 180
           AEAFT S+ LS  SSS   SSLM EEK+IPEV  +RLV+DEEEVFNMP IIA MAEGLIL
Sbjct: 121 AEAFTSSNRLSSLSSSLLCSSLMSEEKMIPEVLTERLVLDEEEVFNMPVIIAGMAEGLIL 180

Query: 181 TPPGMKRGFSWEEYENTVELSLWNDE 204
           TPPGMKRGF+WEEYE+TVELSLW+D+
Sbjct: 181 TPPGMKRGFNWEEYEDTVELSLWSDD 206

[Close]

BLAST of Tan0012162 vs. ExPASy TrEMBL
Match: A0A6J1F3A6 (dehydration-responsive element-binding protein 1B-like OS=Cucurbita moschata OX=3662 GN=LOC111441748 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 1.7e-79
Identity = 162/206 (78.64%), Postives = 174/206 (84.47%), Query Frame = 0


Query: 1   MHSSSSSSTNDHLTP---PVAAKRKAGRKKFQETRHPIYKGVRQRNCRWVCELRQPNKKS 60
           M SSSSSSTN+HL P     + KRKAGRKKFQETRHPIYKGVRQRN +WV ELR PNK S
Sbjct: 1   MPSSSSSSTNEHLPPSQKTASTKRKAGRKKFQETRHPIYKGVRQRNGKWVSELRWPNKNS 60

Query: 61  SFWVGTFCSPKMAAVAYDVVALAIKGESAALNFPELAHLFPRVTSSLSSINDIRTMAIET 120
           +FWVGTFC+P+MAAVAYDVVAL IKGESA LNFP   HLFPRV SS SSINDIRTMA+E 
Sbjct: 61  TFWVGTFCTPEMAAVAYDVVALTIKGESAPLNFPNWTHLFPRVKSSSSSINDIRTMAVEA 120

Query: 121 AEAFTLSDMLSFSSSSSSSSSLMLEEKVIPEVFMDRLVVDEEEVFNMPAIIADMAEGLIL 180
           AEAFT S+ LS  SSSS  SSL  EEKVIP V  DRLV+DEEEVFNMPAIIA MAEGLIL
Sbjct: 121 AEAFTSSNRLSSLSSSSLCSSLTSEEKVIPAVLTDRLVLDEEEVFNMPAIIAGMAEGLIL 180

Query: 181 TPPGMKRGFSWEEYENTVELSLWNDE 204
           TPPGMKRGF+WEEYE+TVELSLWND+
Sbjct: 181 TPPGMKRGFNWEEYEDTVELSLWNDD 206

[Close]

BLAST of Tan0012162 vs. ExPASy TrEMBL
Match: A0A6J1J762 (dehydration-responsive element-binding protein 1B-like OS=Cucurbita maxima OX=3661 GN=LOC111481980 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.8e-79
Identity = 161/206 (78.16%), Postives = 175/206 (84.95%), Query Frame = 0


Query: 1   MHSSSSSSTNDHLTP---PVAAKRKAGRKKFQETRHPIYKGVRQRNCRWVCELRQPNKKS 60
           M SSSSSSTN+HL P     + KRKAGRKKFQETRHPIYKGVRQRN +WV ELR PNK S
Sbjct: 1   MPSSSSSSTNEHLPPSQKTASTKRKAGRKKFQETRHPIYKGVRQRNGKWVSELRWPNKNS 60

Query: 61  SFWVGTFCSPKMAAVAYDVVALAIKGESAALNFPELAHLFPRVTSSLSSINDIRTMAIET 120
           +FWVGTFCSP+MAAVAYDVVAL IKGESA LNFP   HLFPRVTSS SSINDIRTMA+E 
Sbjct: 61  TFWVGTFCSPEMAAVAYDVVALTIKGESAPLNFPNWTHLFPRVTSSSSSINDIRTMAMEA 120

Query: 121 AEAFTLSDMLSFSSSSSSSSSLMLEEKVIPEVFMDRLVVDEEEVFNMPAIIADMAEGLIL 180
           AEAFT S+ LS  SSS   SSLM EEK+IPEV  +RLV+DEEEVFNMP IIA MAEGLIL
Sbjct: 121 AEAFTSSNRLSSLSSSLLCSSLMSEEKMIPEVLTERLVLDEEEVFNMPVIIAGMAEGLIL 180

Query: 181 TPPGMKRGFSWEEYENTVELSLWNDE 204
           TPPGMKRGF+WEEYE+TVELSLW+D+
Sbjct: 181 TPPGMKRGFNWEEYEDTVELSLWSDD 206

[Close]

BLAST of Tan0012162 vs. ExPASy TrEMBL
Match: A0A5D3DNN2 (Dehydration-responsive element-binding protein 1F-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G003570 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.6e-75
Identity = 158/207 (76.33%), Postives = 169/207 (81.64%), Query Frame = 0


Query: 1   MHSSSSSSTNDHLTPP-VAAKRKAGRKKFQETRHPIYKGVRQRNCRWVCELRQPNKKSSF 60
           M SSSSSSTNDHL PP   AKRKAGRKKFQETRHPIYKGVRQRN +WVCELRQPNKKSSF
Sbjct: 1   MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF 60

Query: 61  WVGTFCSPKMAAVAYDVVALAIKGESAALNFPELAHLFPRVTSSLSSINDIRTMAIETAE 120
           WVGTFCSPK AA+AYDVVALAIKGES +LNFP  AH FPRV SS SSINDIR MAI+TAE
Sbjct: 61  WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE 120

Query: 121 AFTLSDM---LSFSSSSSSSSSLMLEEKVIPEVFMDRLVVDEEEVFNMPAIIADMAEGLI 180
            FT SD+   LS  SS SS  SLM EEKV+P  F      DEEEVFNMPAIIA +AEGLI
Sbjct: 121 TFTSSDIMMPLSSPSSPSSLCSLMSEEKVVPNYFW-----DEEEVFNMPAIIAGIAEGLI 180

Query: 181 LTPPGMKRGFSWEEYENTVELSLWNDE 204
           +TPPGMKR F WE+ ENT+ELSLW+ E
Sbjct: 181 ITPPGMKREFDWEDSENTMELSLWSHE 202

[Close]

BLAST of Tan0012162 vs. ExPASy TrEMBL
Match: A0A1S3B6L0 (dehydration-responsive element-binding protein 1F-like OS=Cucumis melo OX=3656 GN=LOC103486580 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.6e-75
Identity = 158/207 (76.33%), Postives = 169/207 (81.64%), Query Frame = 0


Query: 1   MHSSSSSSTNDHLTPP-VAAKRKAGRKKFQETRHPIYKGVRQRNCRWVCELRQPNKKSSF 60
           M SSSSSSTNDHL PP   AKRKAGRKKFQETRHPIYKGVRQRN +WVCELRQPNKKSSF
Sbjct: 1   MPSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRQPNKKSSF 60

Query: 61  WVGTFCSPKMAAVAYDVVALAIKGESAALNFPELAHLFPRVTSSLSSINDIRTMAIETAE 120
           WVGTFCSPK AA+AYDVVALAIKGES +LNFP  AH FPRV SS SSINDIR MAI+TAE
Sbjct: 61  WVGTFCSPKTAAIAYDVVALAIKGESVSLNFPNFAHSFPRVMSSSSSINDIRAMAIKTAE 120

Query: 121 AFTLSDM---LSFSSSSSSSSSLMLEEKVIPEVFMDRLVVDEEEVFNMPAIIADMAEGLI 180
            FT SD+   LS  SS SS  SLM EEKV+P  F      DEEEVFNMPAIIA +AEGLI
Sbjct: 121 TFTSSDIMMPLSSPSSPSSLCSLMSEEKVVPNYFW-----DEEEVFNMPAIIAGIAEGLI 180

Query: 181 LTPPGMKRGFSWEEYENTVELSLWNDE 204
           +TPPGMKR F WE+ ENT+ELSLW+ E
Sbjct: 181 ITPPGMKREFDWEDSENTMELSLWSHE 202

[Close]

BLAST of Tan0012162 vs. ExPASy TrEMBL
Match: I3WEU3 (CBF3 protein OS=Cucumis sativus OX=3659 GN=CBF3 PE=2 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 2.0e-72
Identity = 155/209 (74.16%), Postives = 168/209 (80.38%), Query Frame = 0


Query: 1   MHSSSSSSTNDHLTPP-VAAKRKAGRKKFQETRHPIYKGVRQRNCRWVCELRQPNKKSSF 60
           M SSSSSSTNDHL PP   AKRKAGRKKFQETRHPIYKGVRQRN +WVCELR+PNKKSSF
Sbjct: 1   MSSSSSSSTNDHLPPPTTVAKRKAGRKKFQETRHPIYKGVRQRNGKWVCELRRPNKKSSF 60

Query: 61  WVGTFCSPKMAAVAYDVVALAIKGESAALNFPELAHLFPRVTSSLSSINDIRTMAIETAE 120
           WVGTFCSPK AA+AYDVVALAIKGES  LNFP  AH FPRV SS SSI+DIR MAI+TAE
Sbjct: 61  WVGTFCSPKRAAIAYDVVALAIKGESVPLNFPNFAHSFPRVMSSSSSISDIRAMAIKTAE 120

Query: 121 AFTLSDMLSFSSSSSSSS----SLMLEEKVI-PEVFMDRLVVDEEEVFNMPAIIADMAEG 180
            FT  D+L+  S SS SS    SLM EEKV+ P  F      DEEEVFNMPAIIA MAEG
Sbjct: 121 TFTSGDILTPLSLSSPSSLSLCSLMSEEKVVGPNYFW-----DEEEVFNMPAIIAGMAEG 180

Query: 181 LILTPPGMKRGFSWEEYENTVELSLWNDE 204
           LI+TPPGMK+ F WE+ ENT+ELSLW+ E
Sbjct: 181 LIITPPGMKKEFDWEDSENTIELSLWSHE 204

[Close]

BLAST of Tan0012162 vs. TAIR 10
Match: AT4G25490.1 (C-repeat/DRE binding factor 1 )

HSP 1 Score: 129.0 bits (323), Expect = 4.2e-30
Identity = 79/188 (42.02%), Postives = 119/188 (63.30%), Query Frame = 0


Query: 20  KRKAGRKKFQETRHPIYKGVRQRNC-RWVCELRQPNKKSSFWVGTFCSPKMAAVAYDVVA 79
           K+ AGRKKF+ETRHPIY+GVRQRN  +WV E+R+PNKK+  W+GTF + +MAA A+DV A
Sbjct: 32  KKPAGRKKFRETRHPIYRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAA 91

Query: 80  LAIKGESAALNFPELAHLFPRVTSSLSSINDIRTMAIETAEAFTLSDMLSFSSSSSSSSS 139
           LA++G SA LNF + A    R+  S +   DI+  A E A AF          +++++  
Sbjct: 92  LALRGRSACLNFADSAWRL-RIPES-TCAKDIQKAAAEAALAF----QDETCDTTTTNHG 151

Query: 140 LMLEEKVI-----PEVFMDRLVVDEEEVFNMPAIIADMAEGLILTPPGMKRGFSWEEYEN 199
           L +EE ++     PE       +DEE +F MP ++ +MAEG++L PP ++   +++  E 
Sbjct: 152 LDMEETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPPSVQWNHNYDG-EG 211

Query: 200 TVELSLWN 202
             ++SLW+
Sbjct: 212 DGDVSLWS 212

[Close]

BLAST of Tan0012162 vs. TAIR 10
Match: AT4G25480.1 (dehydration response element B1A )

HSP 1 Score: 126.7 bits (317), Expect = 2.1e-29
Identity = 81/204 (39.71%), Postives = 125/204 (61.27%), Query Frame = 0


Query: 2   HSSSSSSTNDHLTPPVAA---KRKAGRKKFQETRHPIYKGVRQRNC-RWVCELRQPNKKS 61
           + SS SS  D++ P +A+   K+ AGRKKF+ETRHPIY+GVR+RN  +WVCE+R+PNKK+
Sbjct: 15  YESSVSSGGDYI-PTLASSCPKKPAGRKKFRETRHPIYRGVRRRNSGKWVCEVREPNKKT 74

Query: 62  SFWVGTFCSPKMAAVAYDVVALAIKGESAALNFPELAHLFPRVTSSLSSINDIRTMAIET 121
             W+GTF + +MAA A+DV ALA++G SA LNF + A    R+  S +   DI+  A E 
Sbjct: 75  RIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRL-RIPES-TCAKDIQKAAAEA 134

Query: 122 AEAFTLSDMLSFSSSSSSSSSLMLEEKVIPEVFMDRLVVDEEEVFNMPAIIADMAEGLIL 181
           A AF      + +         ++E     E   +   + +E +F MP+++A+MAEG++L
Sbjct: 135 ALAFQDEMCDATTDHGFDMEETLVEAIYTAEQSENAFYMHDEAMFEMPSLLANMAEGMLL 194

Query: 182 TPPGMKRGFSWEEYENTVELSLWN 202
             P ++   + E   +  ++SLW+
Sbjct: 195 PLPSVQWNHNHEVDGDDDDVSLWS 215

[Close]

BLAST of Tan0012162 vs. TAIR 10
Match: AT4G25470.1 (C-repeat/DRE binding factor 2 )

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-28
Identity = 81/206 (39.32%), Postives = 126/206 (61.17%), Query Frame = 0


Query: 2   HSSSSSSTNDHLTPPVAA---KRKAGRKKFQETRHPIYKGVRQRNC-RWVCELRQPNKKS 61
           + S  SS  D+ +P +A    K+ AGRKKF+ETRHPIY+GVRQRN  +WVCELR+PNKK+
Sbjct: 15  YESPVSSGGDY-SPKLATSCPKKPAGRKKFRETRHPIYRGVRQRNSGKWVCELREPNKKT 74

Query: 62  SFWVGTFCSPKMAAVAYDVVALAIKGESAALNFPELAHLFPRVTSSLSSINDIRTMAIET 121
             W+GTF + +MAA A+DV A+A++G SA LNF + A    R+  S +   +I+  A E 
Sbjct: 75  RIWLGTFQTAEMAARAHDVAAIALRGRSACLNFADSAWRL-RIPES-TCAKEIQKAAAEA 134

Query: 122 AEAFTLSDMLSFSSSSS--SSSSLMLEEKVIPEVFMDRLVVDEEEVFNMPAIIADMAEGL 181
           A  F   +M   ++ +        ++E    PE   D   +DEE +  M +++ +MAEG+
Sbjct: 135 ALNFQ-DEMCHMTTDAHGLDMEETLVEAIYTPEQSQDAFYMDEEAMLGMSSLLDNMAEGM 194

Query: 182 ILTPPGMKRGFSWEEYENTVELSLWN 202
           +L  P ++  +++ + E   ++SLW+
Sbjct: 195 LLPSPSVQWNYNF-DVEGDDDVSLWS 215

[Close]

BLAST of Tan0012162 vs. TAIR 10
Match: AT5G51990.1 (C-repeat-binding factor 4 )

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-28
Identity = 80/208 (38.46%), Postives = 121/208 (58.17%), Query Frame = 0


Query: 5   SSSSTNDHLTPPVAA---KRKAGRKKFQETRHPIYKGVRQRNC-RWVCELRQPNKKSSFW 64
           S  S +   +P +A+   K++AGRKKF+ETRHPIY+GVRQRN  +WVCE+R+PNKKS  W
Sbjct: 20  SPVSDSSECSPKLASSCPKKRAGRKKFRETRHPIYRGVRQRNSGKWVCEVREPNKKSRIW 79

Query: 65  VGTFCSPKMAAVAYDVVALAIKGESAALNFPELAH--LFPRVTSSLSSINDIRTMAIETA 124
           +GTF + +MAA A+DV ALA++G SA LNF + A     P  T       +I+  A E A
Sbjct: 80  LGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPETTCP----KEIQKAASEAA 139

Query: 125 EAF-----TLSDMLSFSSSSSSSSSLMLEEKVIPEVFMDRLVVDEEEVFNMPAIIADMAE 184
            AF     T     +  +  ++   +   E+   E       +D+E +  MP    +MAE
Sbjct: 140 MAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFYMDDEALLGMPNFFENMAE 199

Query: 185 GLILTPPGMKRGFSWEEYENTVELSLWN 202
           G++L PP +  G++  +++   ++SLW+
Sbjct: 200 GMLLPPPEV--GWNHNDFDGVGDVSLWS 221

[Close]

BLAST of Tan0012162 vs. TAIR 10
Match: AT5G25810.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 106.7 bits (265), Expect = 2.3e-23
Identity = 70/141 (49.65%), Postives = 93/141 (65.96%), Query Frame = 0


Query: 5   SSSSTNDHLTPPVAAKRKAGRKK--FQETRHPIYKGVRQRNC-RWVCELRQPNKKSSFWV 64
           +S ST       V  + +  +KK      +HP+Y+GVR+RN  +WV E+R+P KKS  W+
Sbjct: 3   ASESTKSWEASAVRQENEEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKKSRIWL 62

Query: 65  GTFCSPKMAAVAYDVVALAIKGESAALNFPELAHLFPRVTSSLSSINDIRTMAI-----E 124
           GTF SP+MAA A+DV AL+IKG SA LNFP+LA  FPR  SSLS   DI+  A+     E
Sbjct: 63  GTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPR-PSSLSP-RDIQVAALKAAHME 122

Query: 125 TAEAFTLSDMLSFSSSSSSSS 138
           T+++F+ S  L+FSSS SSSS
Sbjct: 123 TSQSFSSSSSLTFSSSQSSSS 141

The following BLAST results are available for this feature:

BLAST of Tan0012162 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P93835	6.0e-29	42.02	Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=370...	[more]
Q9M0L0	3.0e-28	39.71	Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=370...	[more]
Q9SYS6	1.9e-27	39.32	Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana OX=370...	[more]
Q9FJ93	1.9e-27	38.46	Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=370...	[more]
A2WZI4	4.3e-27	38.39	Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. indica ...	[more]

BLAST of Tan0012162 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7017431.1	1.4e-80	79.61	Dehydration-responsive element-binding protein 1B, partial [Cucurbita argyrosper...	[more]
XP_023528801.1	2.5e-80	79.13	dehydration-responsive element-binding protein 1B-like [Cucurbita pepo subsp. pe...	[more]
KAG6580677.1	7.1e-80	79.13	Dehydration-responsive element-binding protein 1B, partial [Cucurbita argyrosper...	[more]
XP_022934612.1	3.5e-79	78.64	dehydration-responsive element-binding protein 1B-like [Cucurbita moschata]	[more]
XP_022983374.1	7.9e-79	78.16	dehydration-responsive element-binding protein 1B-like [Cucurbita maxima]	[more]

BLAST of Tan0012162 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F3A6	1.7e-79	78.64	dehydration-responsive element-binding protein 1B-like OS=Cucurbita moschata OX=...	[more]
A0A6J1J762	3.8e-79	78.16	dehydration-responsive element-binding protein 1B-like OS=Cucurbita maxima OX=36...	[more]
A0A5D3DNN2	2.6e-75	76.33	Dehydration-responsive element-binding protein 1F-like OS=Cucumis melo var. maku...	[more]
A0A1S3B6L0	2.6e-75	76.33	dehydration-responsive element-binding protein 1F-like OS=Cucumis melo OX=3656 G...	[more]
I3WEU3	2.0e-72	74.16	CBF3 protein OS=Cucumis sativus OX=3659 GN=CBF3 PE=2 SV=1	[more]

BLAST of Tan0012162 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25490.1	4.2e-30	42.02	C-repeat/DRE binding factor 1	[more]
AT4G25480.1	2.1e-29	39.71	dehydration response element B1A	[more]
AT4G25470.1	1.4e-28	39.32	C-repeat/DRE binding factor 2	[more]
AT5G51990.1	1.4e-28	38.46	C-repeat-binding factor 4	[more]
AT5G25810.1	2.3e-23	49.65	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 36..47 score: 41.36 coord: 73..93 score: 50.04
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 35..97 e-value: 3.6E-17 score: 73.0
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 34..83 e-value: 5.7E-9 score: 36.1
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 35..91 score: 15.435039
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 34..93 e-value: 2.06076E-21 score: 81.5491
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 35..92 e-value: 2.0E-16 score: 61.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..31
None	No IPR available	PANTHER	PTHR31839:SF39	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1B-LIKE	coord: 4..201
None	No IPR available	PANTHER	PTHR31839	DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D	coord: 4..201
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 35..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0012162.1	Tan0012162.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity