Tan0012122 (gene) Snake gourd v1

Overview


Name	Tan0012122
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	CCHC-type domain-containing protein
Location	LG07: 67866408 .. 67867341 (-)
RNA-Seq Expression	Tan0012122
Synteny	Tan0012122

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGATGAAGAGTTCAACAACCGGTTAGCAAGTCTGAACCTCAAAGAGGAGGAACTAGGAGGAGTGGTGGAGATCGACGACAATGAACTCGAGGACTTCGATAAAAGAAATCAAGACGAAGTGGTTTGCAAAATTCTAACTACAAAAACCATTCACGCAGAAGTCTTCAAGAGCATAGTTCCTAAGATATGGAATATGGAGGGAAATATGAAGAAGATAGAAATCTTTGGAAGAAATGTTTTTATGTGCTCATTCAGAAGCAAGGCTGAGAAATGTAGAATCGTCAAAGGAGGTCCATGGACCTTCGACAGGGGCCTGGTGGTTTTCGAAGAAATCAAAGGAGCTCTCAACCTAAAGGCAATGGAATTCAGGTATGCTTTATTTTGGGTGCATTTTCTTGATCTCCCCAGAGTGTGTTTTACCAGGAAAACAGCGGAGGCTCTAGGGAATTCCATCGGGAGGTTCGAAGGAGTTGAATCTGCGAAACAGTAAGTGTCAAATGGCCAAACCCTTAGAGTGAGAGTTCGGATGGATGTCTTTGAGACCGTTGAGAAGAGCTGTTAAGCTCAAGATTGGGTCGATGGGAGACGAGCTGTGGGTTCAAGTCAGATATGAAAAGCTCCCAGACTTTTGCTATGGATGTGGAATAATAGGGCATCTGGTCAAGGATTGCGGGACAGAGGTAGGAGGAATCAAAACCAACCTGCAGTTTGGAGACTGGCTGAAAGCTAACGCTCGAATGGGAGGAGAAGAGCTAACTAGGCGCATAATGAGAAACTTCGTAACCCATGGAAGGGGTCGGGAAGGGGTACTCACCGCCATGAGAGAGAGAGCGAAAGAGAGGGGAGTATCTGGAGGAGCAGGAAGAAGTGCTGTTGCGGGAGGGGCCGGAGATCAGTGGTGGGCGATATGCCGTAAAAATGGGATCTAA

mRNA sequence

ATGGAAGATGAAGAGTTCAACAACCGGTTAGCAAGTCTGAACCTCAAAGAGGAGGAACTAGGAGGAGTGGTGGAGATCGACGACAATGAACTCGAGGACTTCGATAAAAGAAATCAAGACGAAGTGGTTTGCAAAATTCTAACTACAAAAACCATTCACGCAGAAGTCTTCAAGAGCATAGTTCCTAAGATATGGAATATGGAGGGAAATATGAAGAAGATAGAAATCTTTGGAAGAAATGTTTTTATGTGCTCATTCAGAAGCAAGGCTGAGAAATGTAGAATCGTCAAAGGAGGTCCATGGACCTTCGACAGGGGCCTGGTGGTTTTCGAAGAAATCAAAGGAGCTCTCAACCTAAAGGCAATGGAATTCAGGTATGCTTTATTTTGGGTGCATTTTCTTGATCTCCCCAGAGTGTGTTTTACCAGGAAAACAGCGGAGGCTCTAGGGAATTCCATCGGGAGGTTCGAAGGAGTTGAATCTGCGAAACAACCGTTGAGAAGAGCTGTTAAGCTCAAGATTGGGTCGATGGGAGACGAGCTGTGGGTTCAAGTCAGATATGAAAAGCTCCCAGACTTTTGCTATGGATGTGGAATAATAGGGCATCTGGTCAAGGATTGCGGGACAGAGGTAGGAGGAATCAAAACCAACCTGCAGTTTGGAGACTGGCTGAAAGCTAACGCTCGAATGGGAGGAGAAGAGCTAACTAGGCGCATAATGAGAAACTTCGTAACCCATGGAAGGGGTCGGGAAGGGGTACTCACCGCCATGAGAGAGAGAGCGAAAGAGAGGGGAGTATCTGGAGGAGCAGGAAGAAGTGCTGTTGCGGGAGGGGCCGGAGATCAGTGGTGGGCGATATGCCGTAAAAATGGGATCTAA

Coding sequence (CDS)

ATGGAAGATGAAGAGTTCAACAACCGGTTAGCAAGTCTGAACCTCAAAGAGGAGGAACTAGGAGGAGTGGTGGAGATCGACGACAATGAACTCGAGGACTTCGATAAAAGAAATCAAGACGAAGTGGTTTGCAAAATTCTAACTACAAAAACCATTCACGCAGAAGTCTTCAAGAGCATAGTTCCTAAGATATGGAATATGGAGGGAAATATGAAGAAGATAGAAATCTTTGGAAGAAATGTTTTTATGTGCTCATTCAGAAGCAAGGCTGAGAAATGTAGAATCGTCAAAGGAGGTCCATGGACCTTCGACAGGGGCCTGGTGGTTTTCGAAGAAATCAAAGGAGCTCTCAACCTAAAGGCAATGGAATTCAGGTATGCTTTATTTTGGGTGCATTTTCTTGATCTCCCCAGAGTGTGTTTTACCAGGAAAACAGCGGAGGCTCTAGGGAATTCCATCGGGAGGTTCGAAGGAGTTGAATCTGCGAAACAACCGTTGAGAAGAGCTGTTAAGCTCAAGATTGGGTCGATGGGAGACGAGCTGTGGGTTCAAGTCAGATATGAAAAGCTCCCAGACTTTTGCTATGGATGTGGAATAATAGGGCATCTGGTCAAGGATTGCGGGACAGAGGTAGGAGGAATCAAAACCAACCTGCAGTTTGGAGACTGGCTGAAAGCTAACGCTCGAATGGGAGGAGAAGAGCTAACTAGGCGCATAATGAGAAACTTCGTAACCCATGGAAGGGGTCGGGAAGGGGTACTCACCGCCATGAGAGAGAGAGCGAAAGAGAGGGGAGTATCTGGAGGAGCAGGAAGAAGTGCTGTTGCGGGAGGGGCCGGAGATCAGTGGTGGGCGATATGCCGTAAAAATGGGATCTAA

Protein sequence

MEDEEFNNRLASLNLKEEELGGVVEIDDNELEDFDKRNQDEVVCKILTTKTIHAEVFKSIVPKIWNMEGNMKKIEIFGRNVFMCSFRSKAEKCRIVKGGPWTFDRGLVVFEEIKGALNLKAMEFRYALFWVHFLDLPRVCFTRKTAEALGNSIGRFEGVESAKQPLRRAVKLKIGSMGDELWVQVRYEKLPDFCYGCGIIGHLVKDCGTEVGGIKTNLQFGDWLKANARMGGEELTRRIMRNFVTHGRGREGVLTAMRERAKERGVSGGAGRSAVAGGAGDQWWAICRKNGI

Homology

[Close]

BLAST of Tan0012122 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 155.2 bits (391), Expect = 8.5e-34
Identity = 81/241 (33.61%), Postives = 124/241 (51.45%), Query Frame = 0


Query: 4   EEFNNRLASLNLKEEELGGVVEIDDNELEDFDKRNQDEVVCKILTTKTIHAEVFKSIVPK 63
           EE+ N      L  EE    V+ID + LE   K  +  ++CK+L+ ++I   V K+ +  
Sbjct: 8   EEWKN----FKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTLKI 67

Query: 64  IWNMEGNMKKIEIFGRNVFMCSFRSKAEKCRIVKGGPWTFDRGLVVFEEIKGALNLKAME 123
            W ++     ++I G N+F+ +F   +++ RI++ GPWTFDR L++ +          M+
Sbjct: 68  AWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMD 127

Query: 124 FRYALFWVHFLDLPRVCFTRKTAEALGNSIGRFEGVES------------------AKQP 183
           FR    WVHF DL   C  +  A  LGN+IG FE VES                    +P
Sbjct: 128 FRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVMKP 187

Query: 184 LRRAVKLKIGSMGDELWVQVRYEKLPDFCYGCGIIGHLVKDCG-TEVGGIKTNLQFGDWL 226
           L R +KL +       W+ ++YE+LPDF Y CG + H++KDC    V  +  NLQ+G WL
Sbjct: 188 LHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYGPWL 244

[Close]

BLAST of Tan0012122 vs. NCBI nr
Match: XP_024953751.1 (uncharacterized protein LOC112498094 [Citrus sinensis])

HSP 1 Score: 145.6 bits (366), Expect = 6.8e-31
Identity = 82/246 (33.33%), Postives = 130/246 (52.85%), Query Frame = 0


Query: 1   MEDEEFNNRLASLNLKEEELGGVVEIDDNELEDFDKRNQDEVVCKILTTKTIHAEVFKSI 60
           ME EE   R  ++ L +EE GG V       +  +K     ++ K++ T+ +  E  K  
Sbjct: 1   MESEELIRRCRAIKLSDEE-GGRVSFKSKMKDKGEKIVAGCLIGKVINTRGVSIEGLKMA 60

Query: 61  VPKIWNMEGNMKKIEIFGRNVFMCSFRSKAEKCRIVKGGPWTFDRGLVVFEEIKGALNLK 120
           + ++W     + KIE  G N+F+  F S+A+K  I+ GGPW FDR L+V  E  G  ++K
Sbjct: 61  MQRVWKTTREV-KIESLGDNIFIFKFGSEADKRSILVGGPWHFDRALIVLIEPVGIGDVK 120

Query: 121 AMEFRYALFWVHFLDLPRVCFTRKTAEALGNSIGRFEGVES------------------A 180
             +F +  FWV   D+P +C T++   ALG +IG+ E VE+                   
Sbjct: 121 KQDFSHTSFWVQIHDVPIMCMTKEMKPALGEAIGKVEEVETDAAGECFGQFLRLRISVDI 180

Query: 181 KQPLRRAVKL-KIGSMGDELWVQVRYEKLPDFCYGCGIIGHLVKDCGTEVGGIKTNLQFG 228
            +PL++ ++L + G   +++ +QV YE+LPDFC+ CG IGH  ++C       K  L +G
Sbjct: 181 TRPLKKILELEQEGQAEEDIPMQVMYERLPDFCFCCGRIGHQYRECAHYKSQSKDELAYG 240

[Close]

BLAST of Tan0012122 vs. NCBI nr
Match: TXG50019.1 (hypothetical protein EZV62_025894 [Acer yangbiense])

HSP 1 Score: 144.8 bits (364), Expect = 1.2e-30
Identity = 79/247 (31.98%), Postives = 130/247 (52.63%), Query Frame = 0


Query: 1   MEDEEFNNRLASLNLKEEELGGVVEIDDNELEDFDKRNQDEVVCKILTTKTIHAEVFKSI 60
           M  EE  N   +L+LKE E G ++ +     +   +R    +  K+L+ K ++ E F S+
Sbjct: 1   MNAEEVANLCEALSLKENE-GLLMSLHSGLKDGGSRRLSLRLAGKLLSVKHVNREAFLSV 60

Query: 61  VPKIWNMEGNMKKIEIFGRNVFMCSFRSKAEKCRIVKGGPWTFDRGLVVFEEIKGALNLK 120
           +P+IW       +IEI   N+F  +F+ ++++  +++GGPW+FD+ L+V EE  G  +++
Sbjct: 61  LPRIWRTVKEF-EIEILEGNIFSFTFKEESDRRSVLRGGPWSFDKALLVLEEPTGKGDIR 120

Query: 121 AMEFRYALFWVHFLDLPRVCFTRKTAEALGNSIG------------------RFEGVESA 180
            M+F    FW+    +P +C T +    LG+ IG                  R   V   
Sbjct: 121 EMKFDKVAFWIQIHKVPLLCMTSEIGRFLGSMIGEVKEIDDGGSGDCVGKYIRVRVVVDV 180

Query: 181 KQPLRRAVKLKIGSMGDELWVQVRYEKLPDFCYGCGIIGHLVKDCGTEVGGIKT---NLQ 227
            +PLRR +++ +   G E  + +RYE+LPD CY CG IGH+V+DC      ++    NL 
Sbjct: 181 TKPLRRMLRVDVLGDGKETNMLLRYERLPDHCYRCGRIGHVVRDCSIVPSSVEPEDYNLM 240

[Close]

BLAST of Tan0012122 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 144.4 bits (363), Expect = 1.5e-30
Identity = 72/205 (35.12%), Postives = 108/205 (52.68%), Query Frame = 0


Query: 42  VVCKILTTKTIHAEVFKSIVPKIWNMEGNMKKIEIFGRNVFMCSFRSKAEKCRIVKGGPW 101
           VV K+ T+K I AE  +S++  +W +  N  + E  G N+++  F+S +EK R++  GPW
Sbjct: 39  VVAKLHTSKRISAEAIRSVMKSVWRVH-NSTRFEPLGMNIYVILFKSLSEKSRVLSSGPW 98

Query: 102 TFDRGLVVFEEIKGALNLKAMEFRYALFWVHFLDLPRVCFTRKTAEALGNSIGRFEGVE- 161
           TF++ L+V            M F +  FW+   ++P  C + + A  LG  +G  E +E 
Sbjct: 99  TFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEG 158

Query: 162 -----------------SAKQPLRRAVKLKIGSMGDELWVQVRYEKLPDFCYGCGIIGHL 221
                               +PLRR +KLK  S G ++W  +RYEKLPDFCY CG IGH 
Sbjct: 159 DGADGWAGPFIRVRVKIDVSKPLRRGIKLK-NSDGKDIWCPLRYEKLPDFCYECGKIGHS 218

Query: 222 VKDCGTEVGGIKTNL--QFGDWLKA 227
            ++C      + TN   Q+GDWL+A
Sbjct: 219 GRECEQRSKVVTTNSPEQYGDWLRA 241

[Close]

BLAST of Tan0012122 vs. NCBI nr
Match: TXG66887.1 (hypothetical protein EZV62_008162 [Acer yangbiense])

HSP 1 Score: 143.7 bits (361), Expect = 2.6e-30
Identity = 84/261 (32.18%), Postives = 140/261 (53.64%), Query Frame = 0


Query: 1   MEDEEFNNRLASLNL--KEEELGGVVEIDDNELEDFDKRNQDE-VVCKILTTKTIHAEVF 60
           M+ EE     ASL+L  K+E L  V E     L+D   R  D  +V K+LT K ++ E F
Sbjct: 1   MDQEEIARLCASLSLQNKDETLWSVRE----TLKDSAGRKLDLCLVGKVLTNKHVNREAF 60

Query: 61  KSIVPKIWNMEGNMKKIEIFGRNVFMCSFRSKAEKCRIVKGGPWTFDRGLVVFEEIKGAL 120
           ++++PKIW        +E+   N F+  FR++ ++  I+ GGPWTFD  L+V E+  G  
Sbjct: 61  RTVMPKIWQ---TTLDVEVVQDNTFLFYFRNQGDRFWILSGGPWTFDNCLLVLEKPSGVR 120

Query: 121 NLKAMEFRYALFWVHFLDLPRVCFTRKTAEALGNSIGRFEGVE----------------- 180
           ++ ++ F    FW+   + P +C T++  E +G+ IG    ++                 
Sbjct: 121 DIISLAFNRVAFWLQIPNAPLLCMTKEMGEFIGHLIGELRDIDVGITGECFGKYMRLKVA 180

Query: 181 -SAKQPLRRAVKLKIGSMGDELWVQVRYEKLPDFCYGCGIIGHLVKDC----GTEVGGIK 237
               +PL+R ++L++   G E  + +RYEKLP++C+ CGIIGH  +DC    G ++GG K
Sbjct: 181 VDVSKPLKRFLRLEL-EKGKESILLLRYEKLPEYCFHCGIIGHSYQDCGQRRGEDIGGSK 240

[Close]

BLAST of Tan0012122 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 4.1e-34
Identity = 81/241 (33.61%), Postives = 124/241 (51.45%), Query Frame = 0


Query: 4   EEFNNRLASLNLKEEELGGVVEIDDNELEDFDKRNQDEVVCKILTTKTIHAEVFKSIVPK 63
           EE+ N      L  EE    V+ID + LE   K  +  ++CK+L+ ++I   V K+ +  
Sbjct: 8   EEWKN----FKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTLKI 67

Query: 64  IWNMEGNMKKIEIFGRNVFMCSFRSKAEKCRIVKGGPWTFDRGLVVFEEIKGALNLKAME 123
            W ++     ++I G N+F+ +F   +++ RI++ GPWTFDR L++ +          M+
Sbjct: 68  AWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMD 127

Query: 124 FRYALFWVHFLDLPRVCFTRKTAEALGNSIGRFEGVES------------------AKQP 183
           FR    WVHF DL   C  +  A  LGN+IG FE VES                    +P
Sbjct: 128 FRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVMKP 187

Query: 184 LRRAVKLKIGSMGDELWVQVRYEKLPDFCYGCGIIGHLVKDCG-TEVGGIKTNLQFGDWL 226
           L R +KL +       W+ ++YE+LPDF Y CG + H++KDC    V  +  NLQ+G WL
Sbjct: 188 LHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSKNLQYGPWL 244

[Close]

BLAST of Tan0012122 vs. ExPASy TrEMBL
Match: A0A5C7GZQ4 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_025894 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 5.6e-31
Identity = 79/247 (31.98%), Postives = 130/247 (52.63%), Query Frame = 0


Query: 1   MEDEEFNNRLASLNLKEEELGGVVEIDDNELEDFDKRNQDEVVCKILTTKTIHAEVFKSI 60
           M  EE  N   +L+LKE E G ++ +     +   +R    +  K+L+ K ++ E F S+
Sbjct: 1   MNAEEVANLCEALSLKENE-GLLMSLHSGLKDGGSRRLSLRLAGKLLSVKHVNREAFLSV 60

Query: 61  VPKIWNMEGNMKKIEIFGRNVFMCSFRSKAEKCRIVKGGPWTFDRGLVVFEEIKGALNLK 120
           +P+IW       +IEI   N+F  +F+ ++++  +++GGPW+FD+ L+V EE  G  +++
Sbjct: 61  LPRIWRTVKEF-EIEILEGNIFSFTFKEESDRRSVLRGGPWSFDKALLVLEEPTGKGDIR 120

Query: 121 AMEFRYALFWVHFLDLPRVCFTRKTAEALGNSIG------------------RFEGVESA 180
            M+F    FW+    +P +C T +    LG+ IG                  R   V   
Sbjct: 121 EMKFDKVAFWIQIHKVPLLCMTSEIGRFLGSMIGEVKEIDDGGSGDCVGKYIRVRVVVDV 180

Query: 181 KQPLRRAVKLKIGSMGDELWVQVRYEKLPDFCYGCGIIGHLVKDCGTEVGGIKT---NLQ 227
            +PLRR +++ +   G E  + +RYE+LPD CY CG IGH+V+DC      ++    NL 
Sbjct: 181 TKPLRRMLRVDVLGDGKETNMLLRYERLPDHCYRCGRIGHVVRDCSIVPSSVEPEDYNLM 240

[Close]

BLAST of Tan0012122 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 7.3e-31
Identity = 72/205 (35.12%), Postives = 108/205 (52.68%), Query Frame = 0


Query: 42  VVCKILTTKTIHAEVFKSIVPKIWNMEGNMKKIEIFGRNVFMCSFRSKAEKCRIVKGGPW 101
           VV K+ T+K I AE  +S++  +W +  N  + E  G N+++  F+S +EK R++  GPW
Sbjct: 39  VVAKLHTSKRISAEAIRSVMKSVWRVH-NSTRFEPLGMNIYVILFKSLSEKSRVLSSGPW 98

Query: 102 TFDRGLVVFEEIKGALNLKAMEFRYALFWVHFLDLPRVCFTRKTAEALGNSIGRFEGVE- 161
           TF++ L+V            M F +  FW+   ++P  C + + A  LG  +G  E +E 
Sbjct: 99  TFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEG 158

Query: 162 -----------------SAKQPLRRAVKLKIGSMGDELWVQVRYEKLPDFCYGCGIIGHL 221
                               +PLRR +KLK  S G ++W  +RYEKLPDFCY CG IGH 
Sbjct: 159 DGADGWAGPFIRVRVKIDVSKPLRRGIKLK-NSDGKDIWCPLRYEKLPDFCYECGKIGHS 218

Query: 222 VKDCGTEVGGIKTNL--QFGDWLKA 227
            ++C      + TN   Q+GDWL+A
Sbjct: 219 GRECEQRSKVVTTNSPEQYGDWLRA 241

[Close]

BLAST of Tan0012122 vs. ExPASy TrEMBL
Match: A0A5C7ICE5 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_008162 PE=4 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.2e-30
Identity = 84/261 (32.18%), Postives = 140/261 (53.64%), Query Frame = 0


Query: 1   MEDEEFNNRLASLNL--KEEELGGVVEIDDNELEDFDKRNQDE-VVCKILTTKTIHAEVF 60
           M+ EE     ASL+L  K+E L  V E     L+D   R  D  +V K+LT K ++ E F
Sbjct: 1   MDQEEIARLCASLSLQNKDETLWSVRE----TLKDSAGRKLDLCLVGKVLTNKHVNREAF 60

Query: 61  KSIVPKIWNMEGNMKKIEIFGRNVFMCSFRSKAEKCRIVKGGPWTFDRGLVVFEEIKGAL 120
           ++++PKIW        +E+   N F+  FR++ ++  I+ GGPWTFD  L+V E+  G  
Sbjct: 61  RTVMPKIWQ---TTLDVEVVQDNTFLFYFRNQGDRFWILSGGPWTFDNCLLVLEKPSGVR 120

Query: 121 NLKAMEFRYALFWVHFLDLPRVCFTRKTAEALGNSIGRFEGVE----------------- 180
           ++ ++ F    FW+   + P +C T++  E +G+ IG    ++                 
Sbjct: 121 DIISLAFNRVAFWLQIPNAPLLCMTKEMGEFIGHLIGELRDIDVGITGECFGKYMRLKVA 180

Query: 181 -SAKQPLRRAVKLKIGSMGDELWVQVRYEKLPDFCYGCGIIGHLVKDC----GTEVGGIK 237
               +PL+R ++L++   G E  + +RYEKLP++C+ CGIIGH  +DC    G ++GG K
Sbjct: 181 VDVSKPLKRFLRLEL-EKGKESILLLRYEKLPEYCFHCGIIGHSYQDCGQRRGEDIGGSK 240

[Close]

BLAST of Tan0012122 vs. ExPASy TrEMBL
Match: A0A5C7ISU8 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_001072 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 1.6e-30
Identity = 75/253 (29.64%), Postives = 139/253 (54.94%), Query Frame = 0


Query: 1   MEDEEFNNRLASLNLKEEELGGVVEIDDNELEDFDKRNQDEVVCKILTTKTIHAEVFKSI 60
           M+ EE     A+L++K ++   +  + D   E   ++    +V KIL+ K ++ +VF+++
Sbjct: 1   MDQEEIARLCAALSIKSKD-EKLWSVQDTLKESAGRKLDLCLVGKILSNKHVNRDVFRTV 60

Query: 61  VPKIWNMEGNMKKIEIFGRNVFMCSFRSKAEKCRIVKGGPWTFDRGLVVFEEIKGALNLK 120
           +PKIW ++    +IE+   N F+  FRS++++CR++ GGPW+FD  L+V E++ G  ++ 
Sbjct: 61  IPKIWQIQ---MEIEVVQDNTFLFYFRSQSDRCRVLAGGPWSFDNSLLVLEKVSGVGDIA 120

Query: 121 AMEFRYALFWVHFLDLPRVCFTRKTAEALGNSIG------------------RFEGVESA 180
            + F    FW+  ++   +C T++    LG  +G                  R + V   
Sbjct: 121 NVSFNRVEFWIQIMNAHLLCMTKEMGIFLGKILGDLVDIDVGVTGECFGKYMRLKVVIDV 180

Query: 181 KQPLRRAVKLKIGSMGDELWVQVRYEKLPDFCYGCGIIGHLVKDC-GTEVGGIK---TNL 232
            +PL+R ++L +   G E  + +RYEKLP++C+ CG++GH  + C     GG K   T+ 
Sbjct: 181 SKPLQRFLRLDLQGNGMESLLLLRYEKLPEYCFNCGLLGHSYQVCIHDNAGGDKRAYTDF 240

[Close]

BLAST of Tan0012122 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 53.5 bits (127), Expect = 3.3e-07
Identity = 32/124 (25.81%), Postives = 56/124 (45.16%), Query Frame = 0


Query: 86  FRSKAEKCRIVKGGPWTFDRGLVVFEEIKGALNLKAMEFRYALFWVHFLDLPRVCFTRKT 145
           F+S+     I++ GPW+F+  + V +     L+  A EF+   FW+    +P    T + 
Sbjct: 66  FQSEESMFSILRRGPWSFNDWMCVIQRWT-KLHSDA-EFKRIPFWIQIRGIPLRFLTARI 125

Query: 146 AEALGNSIGRFEGVESAKQPLRRAVKLKIGSMGDELWVQVRYEKLPDFCYGCGIIGHLVK 205
             ++G  +G F               L+     D   ++ +YEKL +FC  CG++ H   
Sbjct: 126 ITSIGERMGLF---------------LETNLGRDVSVLKFQYEKLKNFCTTCGMLSHDAS 172

Query: 206 DCGT 210
           +C T
Sbjct: 186 ECPT 172

The following BLAST results are available for this feature:

BLAST of Tan0012122 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0012122 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132681.1	8.5e-34	33.61	uncharacterized protein LOC111005481 [Momordica charantia]	[more]
XP_024953751.1	6.8e-31	33.33	uncharacterized protein LOC112498094 [Citrus sinensis]	[more]
TXG50019.1	1.2e-30	31.98	hypothetical protein EZV62_025894 [Acer yangbiense]	[more]
XP_022149484.1	1.5e-30	35.12	uncharacterized protein LOC111017902 [Momordica charantia]	[more]
TXG66887.1	2.6e-30	32.18	hypothetical protein EZV62_008162 [Acer yangbiense]	[more]

BLAST of Tan0012122 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BSZ1	4.1e-34	33.61	uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]
A0A5C7GZQ4	5.6e-31	31.98	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02589...	[more]
A0A6J1D765	7.3e-31	35.12	uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A5C7ICE5	1.2e-30	32.18	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00816...	[more]
A0A5C7ISU8	1.6e-30	29.64	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_001072 PE=4 SV=1	[more]

BLAST of Tan0012122 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42140.1	3.3e-07	25.81	zinc ion binding;nucleic acid binding	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 163..207 e-value: 3.8E-13 score: 48.9
IPR025558	Domain of unknown function DUF4283	PFAM	PF14111	DUF4283	coord: 35..163 e-value: 2.3E-18 score: 66.1
None	No IPR available	PANTHER	PTHR31286:SF26	BNAC07G15150D PROTEIN	coord: 57..284
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 57..284
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 194..207 score: 9.339545

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0012122.1	Tan0012122.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding