Tan0012093 (gene) Snake gourd v1

Overview


Name	Tan0012093
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	Germin-like protein
Location	LG09: 63172579 .. 63173792 (-)
RNA-Seq Expression	Tan0012093
Synteny	Tan0012093

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTGTTATCCTTTTACATAGTTCCCTTTACTTATATAAATCGCCTCTCATTCCTCTACTTGCTTCAAGTGTTTATTGTTATCCATGGCCAACAAGATGATGGTTCTTCCTCTTTTCATCGTCTTCTCCGTCCTCGTCTCCTCTTCCCATGCTCTCGTCCAAGATTTCTGCGTCGCCGACCTCAAATCCCCCGACACCCCTGCTGGCTTCCCTTGCAAGAAGGAATCCCTTGTCACCGAAAATGACTTCGCTTACTCGGGCCTTGGTGTTGCTGGTAATGTTGAACGTCGACTACTATTAAACCTACAAATTTAAATTCATATGTTATCGATTATTCATGTTCTAACTTTTTTTTTCTTCCATTAGTGAACTTACCAAATTGGCATACGGTGAACAATTTTGTCTAGTAATATTTCATAAGTACTTTTAGCGAAAGTCAAAAGGGTTTTTTATACAAATCATTTTAATATATGTTCGGTTCTACACTCCTAAAAGTACTTTTAAGTGCATTTTATTTTTCCAAAAATCCTTTTTAGATTCCTTCGCGAAAGTACGAAATATATGACAAGTTTGAAGGAGAAGCTTTCAGCATTGGACTAAAGCACATTCCAAACATTATCTTTAATAGAAAAAAAAATTCATTATATCAGCTCTAACACTAATCTAATATGATGTTAAATTACTATTTAACCCAAAATTTCAAGTTAATAAGCTATGCATCATATTGTCTAATAATTTATTCATAATCTTAATAGGTAACACCTCAAACATCATCAAGGCTGCAGTGACTCCAGCCTTCACTGCCCAATTCCCCGGCGTGAATGGCCTAGGAATCTCACTGGCTCGCCTCGACCTAGCGATCGGGGGTGTGATTCCGTTCCACACCCACCCCGCCGCCTCCGAAATTCTGCTCGTGGTCGAAGGCACGATCTGCGCCGGGTTTGTTTCGTCGGCGAATACAGTCTACTTCAAAACGCTGAACAAAGGTGACATTATGGTATTCCCTCAAGGGCTGCTACATTTCCAGATAAACTCCGGCAAGGGCATTGCTCTTGGATTTGTTAGCTTCAGTAGCCCCAACCCAGGGCTGCAAATTTTGGACTTCGCCTTGTTCGGCAACGAGTTGCCAACCGATATCATCGCGAAGACGACGTTCTTAGACCCCGTGACGATCAAGAAGCTGAAGAGCGTTCTGGGTGGGAGTGGTTAAGACA

mRNA sequence

CTTTGTTATCCTTTTACATAGTTCCCTTTACTTATATAAATCGCCTCTCATTCCTCTACTTGCTTCAAGTGTTTATTGTTATCCATGGCCAACAAGATGATGGTTCTTCCTCTTTTCATCGTCTTCTCCGTCCTCGTCTCCTCTTCCCATGCTCTCGTCCAAGATTTCTGCGTCGCCGACCTCAAATCCCCCGACACCCCTGCTGGCTTCCCTTGCAAGAAGGAATCCCTTGTCACCGAAAATGACTTCGCTTACTCGGGCCTTGGTGTTGCTGGTAACACCTCAAACATCATCAAGGCTGCAGTGACTCCAGCCTTCACTGCCCAATTCCCCGGCGTGAATGGCCTAGGAATCTCACTGGCTCGCCTCGACCTAGCGATCGGGGGTGTGATTCCGTTCCACACCCACCCCGCCGCCTCCGAAATTCTGCTCGTGGTCGAAGGCACGATCTGCGCCGGGTTTGTTTCGTCGGCGAATACAGTCTACTTCAAAACGCTGAACAAAGGTGACATTATGGTATTCCCTCAAGGGCTGCTACATTTCCAGATAAACTCCGGCAAGGGCATTGCTCTTGGATTTGTTAGCTTCAGTAGCCCCAACCCAGGGCTGCAAATTTTGGACTTCGCCTTGTTCGGCAACGAGTTGCCAACCGATATCATCGCGAAGACGACGTTCTTAGACCCCGTGACGATCAAGAAGCTGAAGAGCGTTCTGGGTGGGAGTGGTTAAGACA

Coding sequence (CDS)

ATGGCCAACAAGATGATGGTTCTTCCTCTTTTCATCGTCTTCTCCGTCCTCGTCTCCTCTTCCCATGCTCTCGTCCAAGATTTCTGCGTCGCCGACCTCAAATCCCCCGACACCCCTGCTGGCTTCCCTTGCAAGAAGGAATCCCTTGTCACCGAAAATGACTTCGCTTACTCGGGCCTTGGTGTTGCTGGTAACACCTCAAACATCATCAAGGCTGCAGTGACTCCAGCCTTCACTGCCCAATTCCCCGGCGTGAATGGCCTAGGAATCTCACTGGCTCGCCTCGACCTAGCGATCGGGGGTGTGATTCCGTTCCACACCCACCCCGCCGCCTCCGAAATTCTGCTCGTGGTCGAAGGCACGATCTGCGCCGGGTTTGTTTCGTCGGCGAATACAGTCTACTTCAAAACGCTGAACAAAGGTGACATTATGGTATTCCCTCAAGGGCTGCTACATTTCCAGATAAACTCCGGCAAGGGCATTGCTCTTGGATTTGTTAGCTTCAGTAGCCCCAACCCAGGGCTGCAAATTTTGGACTTCGCCTTGTTCGGCAACGAGTTGCCAACCGATATCATCGCGAAGACGACGTTCTTAGACCCCGTGACGATCAAGAAGCTGAAGAGCGTTCTGGGTGGGAGTGGTTAA

Protein sequence

MANKMMVLPLFIVFSVLVSSSHALVQDFCVADLKSPDTPAGFPCKKESLVTENDFAYSGLGVAGNTSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPAASEILLVVEGTICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGIALGFVSFSSPNPGLQILDFALFGNELPTDIIAKTTFLDPVTIKKLKSVLGGSG

Homology

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BLAST of Tan0012093 vs. ExPASy Swiss-Prot
Match: Q9ZRA4 (Auxin-binding protein ABP19a OS=Prunus persica OX=3760 GN=ABP19A PE=3 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 3.6e-85
Identity = 157/208 (75.48%), Postives = 176/208 (84.62%), Query Frame = 0


Query: 6   MVLPLFIVFSVLVSSSHALVQDFCVADLKSPDTPAGFPCKKESLVTENDFAYSGLGVAGN 65
           M+ P+F  F +L+SSSHA VQDFCVAD K+PD PAG+ CKK + VT NDF YSGLG+AGN
Sbjct: 1   MIFPIFFTFFLLLSSSHASVQDFCVADYKAPDGPAGYSCKKPAKVTINDFVYSGLGIAGN 60

Query: 66  TSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPAASEILLVVEGTICAG 125
           T+NIIKAAVTPAF AQFPGVNGLGISLARLDL  GGVIPFHTHP ASE+LLVV+GTI AG
Sbjct: 61  TTNIIKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAG 120

Query: 126 FVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGIALGFVSFSSPNPGLQILDFALFGN 185
           FV+S NT Y KTL KGDIMVFPQGLLHFQ+N G   AL F SFSSP+PGLQILDFALF N
Sbjct: 121 FVASDNTPYLKTLKKGDIMVFPQGLLHFQVNGGGTPALAFPSFSSPSPGLQILDFALFKN 180

Query: 186 ELPTDIIAKTTFLDPVTIKKLKSVLGGS 214
           +LPT++IA+TTFLD   IKKLK VLGG+
Sbjct: 181 DLPTELIAQTTFLDAAQIKKLKGVLGGT 208

[Close]

BLAST of Tan0012093 vs. ExPASy Swiss-Prot
Match: O04011 (Auxin-binding protein ABP20 OS=Prunus persica OX=3760 GN=ABP20 PE=2 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 2.0e-83
Identity = 150/213 (70.42%), Postives = 176/213 (82.63%), Query Frame = 0


Query: 1   MANKMMVLPLFIVFSVLVSSSHALVQDFCVADLKSPDTPAGFPCKKESLVTENDFAYSGL 60
           M    M+ P+   F +L+SSS+A VQDFCVADL +P+ PAGF CKK + V  NDF +SGL
Sbjct: 1   MPQATMIFPILFTFFLLLSSSNAAVQDFCVADLAAPEGPAGFSCKKPASVKVNDFVFSGL 60

Query: 61  GVAGNTSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPAASEILLVVEG 120
           G+AGNTSNIIKAAVTPAF AQFPGVNGLGIS+ARLDLA+GGV+PFHTHP ASE+L+V +G
Sbjct: 61  GIAGNTSNIIKAAVTPAFVAQFPGVNGLGISIARLDLAVGGVVPFHTHPGASEVLIVAQG 120

Query: 121 TICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGIALGFVSFSSPNPGLQILDF 180
           TICAGFV+S NT Y +TL KGDIMVFPQGLLHFQ+N G+  AL F SF S +PGLQILDF
Sbjct: 121 TICAGFVASDNTPYLQTLEKGDIMVFPQGLLHFQVNGGEAPALAFASFGSASPGLQILDF 180

Query: 181 ALFGNELPTDIIAKTTFLDPVTIKKLKSVLGGS 214
           ALF N+LPT++IA+TTFLD   IKKLK VLGG+
Sbjct: 181 ALFKNDLPTEVIAQTTFLDAAQIKKLKGVLGGT 213

[Close]

BLAST of Tan0012093 vs. ExPASy Swiss-Prot
Match: O04012 (Auxin-binding protein ABP19b OS=Prunus persica OX=3760 GN=ABP19B PE=3 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 4.9e-82
Identity = 149/208 (71.63%), Postives = 174/208 (83.65%), Query Frame = 0


Query: 6   MVLPLFIVFSVLVSSSHALVQDFCVADLKSPDTPAGFPCKKESLVTENDFAYSGLGVAGN 65
           M+ P+F  F +L+S+SHA VQDFCVAD K+PD PAG+ CKK ++VT NDF YSGLG+AGN
Sbjct: 1   MIFPIFFTFFLLLSTSHASVQDFCVADYKAPDGPAGYSCKKPAIVTVNDFVYSGLGIAGN 60

Query: 66  TSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPAASEILLVVEGTICAG 125
           T+NI KAAVTPAF AQFPGVNGLGISLARLDL  GGV+PFHTHP ASE+LLVV+GTI AG
Sbjct: 61  TTNIFKAAVTPAFAAQFPGVNGLGISLARLDLGPGGVVPFHTHPGASEVLLVVQGTIIAG 120

Query: 126 FVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGIALGFVSFSSPNPGLQILDFALFGN 185
           FV+S NT Y KTL KGDI+VFPQGLLHFQ+N G   A+ F SFSSP+PGLQI+DFALF N
Sbjct: 121 FVASDNTPYLKTLKKGDIIVFPQGLLHFQVNGGDTPAIAFPSFSSPSPGLQIVDFALFKN 180

Query: 186 ELPTDIIAKTTFLDPVTIKKLKSVLGGS 214
           +L T++IA+TT LD   IKKLK VLGG+
Sbjct: 181 DLATELIAQTTLLDAPQIKKLKGVLGGT 208

[Close]

BLAST of Tan0012093 vs. ExPASy Swiss-Prot
Match: L8BRS3 (Germin-like protein OS=Morus alba OX=3498 PE=1 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.1e-78
Identity = 138/209 (66.03%), Postives = 173/209 (82.78%), Query Frame = 0


Query: 6   MVLPLFIVFSVLVSSSHALVQDFCVADLKSPDTPAGFPCKKESLVTENDFAYSGLGVAGN 65
           M++P+F +FS+L SSSH  +QDFCVAD  +P  PAG+ CK  + VT ++F YSGLG+ GN
Sbjct: 1   MIVPIFFLFSLLFSSSHGAIQDFCVADYSAPQGPAGYSCKNPAKVTVDNFVYSGLGITGN 60

Query: 66  TSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPAASEILLVVEGTICAG 125
           T+N+IKAAVT AF  QFPGVNGLGISLAR DLA GGVIPFHTHP ASEI++V+EG++CA 
Sbjct: 61  TTNLIKAAVTTAFDNQFPGVNGLGISLARPDLAPGGVIPFHTHPGASEIIIVIEGSLCAA 120

Query: 126 FVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGIALGFVSFSSPNPGLQILDFALFGN 185
           FVSS N VY K+L KGD M+FP GLLHFQ+N+GK  AL FV+F+SPNPGLQ++D+ALFGN
Sbjct: 121 FVSSDNKVYLKSLKKGDTMIFPSGLLHFQLNAGKNNALFFVAFNSPNPGLQLVDYALFGN 180

Query: 186 ELPTDIIAKTTFLDPVTIKKLKSVLGGSG 215
           +L T+++A  +FLDP  IK+LK+VLGGSG
Sbjct: 181 DLATELVAAASFLDPAEIKRLKAVLGGSG 209

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BLAST of Tan0012093 vs. ExPASy Swiss-Prot
Match: P94072 (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana OX=3702 GN=GER3 PE=1 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.1e-77
Identity = 138/208 (66.35%), Postives = 169/208 (81.25%), Query Frame = 0


Query: 6   MVLPLFIVFSVLVSSSHALVQDFCVADLKSPDTPAGFPCKKESLVTENDFAYSGLGVAGN 65
           M++ +F + S++ + S A VQDFCVAD K P +P+G+ CK    VTENDFA++GLG AGN
Sbjct: 3   MIIQIFFIISLISTISFASVQDFCVADPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGN 62

Query: 66  TSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPAASEILLVVEGTICAG 125
           TSNIIKAAVTPAF   + G+NGLG+SLARLDLA GGVIP HTHP ASE+L+V++GTICAG
Sbjct: 63  TSNIIKAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAG 122

Query: 126 FVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGIALGFVSFSSPNPGLQILDFALFGN 185
           F+SSAN VY KTLN+GD MVFPQGLLHFQ+NSGKG AL FV+F S +PGLQIL FALF N
Sbjct: 123 FISSANKVYLKTLNRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALFAN 182

Query: 186 ELPTDIIAKTTFLDPVTIKKLKSVLGGS 214
           +LP++++  TTFL    +KKLK VLGG+
Sbjct: 183 DLPSELVEATTFLSDAEVKKLKGVLGGT 210

[Close]

BLAST of Tan0012093 vs. NCBI nr
Match: XP_022968205.1 (auxin-binding protein ABP19a-like [Cucurbita maxima])

HSP 1 Score: 391.3 bits (1004), Expect = 5.2e-105
Identity = 199/214 (92.99%), Postives = 203/214 (94.86%), Query Frame = 0


Query: 1   MANKMMVLPLFIVFSVLVSSSHALVQDFCVADLKSPDTPAGFPCKKESLVTENDFAYSGL 60
           MANK MVLPLF VFSVL S SHALVQDFCVADLKSPDTPAGFPCKK SLVTE DF YSGL
Sbjct: 1   MANK-MVLPLFFVFSVLASFSHALVQDFCVADLKSPDTPAGFPCKKVSLVTEKDFVYSGL 60

Query: 61  GVAGNTSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPAASEILLVVEG 120
           GVAGNTSN+IKAAVTPAFTAQFPGVNGLGISLARLDLA+GGVIPFHTHPAASE+LLVVEG
Sbjct: 61  GVAGNTSNLIKAAVTPAFTAQFPGVNGLGISLARLDLAVGGVIPFHTHPAASEVLLVVEG 120

Query: 121 TICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGIALGFVSFSSPNPGLQILDF 180
           TICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKG ALGFVSFSS NPGLQILDF
Sbjct: 121 TICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGGALGFVSFSSANPGLQILDF 180

Query: 181 ALFGNELPTDIIAKTTFLDPVTIKKLKSVLGGSG 215
           ALFGNELPTDI+AKTTFLDP TIKKLK VLGGSG
Sbjct: 181 ALFGNELPTDIVAKTTFLDPATIKKLKGVLGGSG 213

[Close]

BLAST of Tan0012093 vs. NCBI nr
Match: XP_023529910.1 (auxin-binding protein ABP19a-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 389.8 bits (1000), Expect = 1.5e-104
Identity = 198/214 (92.52%), Postives = 202/214 (94.39%), Query Frame = 0


Query: 1   MANKMMVLPLFIVFSVLVSSSHALVQDFCVADLKSPDTPAGFPCKKESLVTENDFAYSGL 60
           MANK MVLPLF  FSVL S SHALVQDFCVADLKSPDTPAGFPCKK SLVTE DF YSGL
Sbjct: 11  MANK-MVLPLFFAFSVLASFSHALVQDFCVADLKSPDTPAGFPCKKVSLVTEKDFVYSGL 70

Query: 61  GVAGNTSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPAASEILLVVEG 120
           GVAGNTSN+IKAAVTPAFTAQFPGVNGLGISLARLDLA+GGVIPFHTHPAASE+LLVVEG
Sbjct: 71  GVAGNTSNLIKAAVTPAFTAQFPGVNGLGISLARLDLAVGGVIPFHTHPAASEVLLVVEG 130

Query: 121 TICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGIALGFVSFSSPNPGLQILDF 180
           TICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKG ALGFVSFSS NPGLQILDF
Sbjct: 131 TICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGGALGFVSFSSANPGLQILDF 190

Query: 181 ALFGNELPTDIIAKTTFLDPVTIKKLKSVLGGSG 215
           ALFGNELPTDI+AKTTFLDP TIKKLK VLGGSG
Sbjct: 191 ALFGNELPTDIVAKTTFLDPATIKKLKGVLGGSG 223

[Close]

BLAST of Tan0012093 vs. NCBI nr
Match: XP_022926078.1 (auxin-binding protein ABP19a-like [Cucurbita moschata] >KAG6588077.1 Auxin-binding protein ABP19a, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021965.1 Auxin-binding protein ABP19a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 389.4 bits (999), Expect = 2.0e-104
Identity = 198/214 (92.52%), Postives = 203/214 (94.86%), Query Frame = 0


Query: 1   MANKMMVLPLFIVFSVLVSSSHALVQDFCVADLKSPDTPAGFPCKKESLVTENDFAYSGL 60
           MA+K MVLPLF VFSVL S SHALVQDFCVADLKSPDTPAGFPCKK SLVTE DF YSGL
Sbjct: 1   MASK-MVLPLFFVFSVLASFSHALVQDFCVADLKSPDTPAGFPCKKVSLVTEKDFVYSGL 60

Query: 61  GVAGNTSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPAASEILLVVEG 120
           GVAGNTSN+IKAAVTPAFTAQFPGVNGLGISLARLDLA+GGVIPFHTHPAASE+LLVVEG
Sbjct: 61  GVAGNTSNLIKAAVTPAFTAQFPGVNGLGISLARLDLAVGGVIPFHTHPAASEVLLVVEG 120

Query: 121 TICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGIALGFVSFSSPNPGLQILDF 180
           TICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKG ALGFVSFSS NPGLQILDF
Sbjct: 121 TICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGGALGFVSFSSANPGLQILDF 180

Query: 181 ALFGNELPTDIIAKTTFLDPVTIKKLKSVLGGSG 215
           ALFGNELPTDI+AKTTFLDP TIKKLK VLGGSG
Sbjct: 181 ALFGNELPTDIVAKTTFLDPATIKKLKGVLGGSG 213

[Close]

BLAST of Tan0012093 vs. NCBI nr
Match: XP_038879713.1 (auxin-binding protein ABP19a-like [Benincasa hispida])

HSP 1 Score: 380.9 bits (977), Expect = 7.0e-102
Identity = 195/215 (90.70%), Postives = 201/215 (93.49%), Query Frame = 0


Query: 1   MANKMMVLPLFIVFSVLVSS-SHALVQDFCVADLKSPDTPAGFPCKKESLVTENDFAYSG 60
           MA KMMVLPLF  FSVL +S S ALVQDFCVADLKS DTPAG+PCKK SLVTE DFAYSG
Sbjct: 1   MAKKMMVLPLFFAFSVLAASFSDALVQDFCVADLKSADTPAGYPCKKVSLVTEKDFAYSG 60

Query: 61  LGVAGNTSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPAASEILLVVE 120
           LGVAGNTSNIIKAAVTPAFTAQFPGVNGLGISLARLDLA+GGVIP HTHPAASE+LLVVE
Sbjct: 61  LGVAGNTSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAVGGVIPMHTHPAASEVLLVVE 120

Query: 121 GTICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGIALGFVSFSSPNPGLQILD 180
           GTICAGFVSSANTVYFKTL KGDIMVFPQGLLHFQINSGK  ALGFVSFSSPNPGLQILD
Sbjct: 121 GTICAGFVSSANTVYFKTLYKGDIMVFPQGLLHFQINSGKTTALGFVSFSSPNPGLQILD 180

Query: 181 FALFGNELPTDIIAKTTFLDPVTIKKLKSVLGGSG 215
           +ALFGNELPTDI+AKTTFLDPVTIKKLK VLGGSG
Sbjct: 181 YALFGNELPTDIVAKTTFLDPVTIKKLKGVLGGSG 215

[Close]

BLAST of Tan0012093 vs. NCBI nr
Match: XP_008450917.1 (PREDICTED: auxin-binding protein ABP19a-like [Cucumis melo] >KAA0055780.1 auxin-binding protein ABP19a-like [Cucumis melo var. makuwa] >TYK10031.1 auxin-binding protein ABP19a-like [Cucumis melo var. makuwa])

HSP 1 Score: 380.2 bits (975), Expect = 1.2e-101
Identity = 193/215 (89.77%), Postives = 199/215 (92.56%), Query Frame = 0


Query: 1   MANKMMVLPLFIVFSVLVSS-SHALVQDFCVADLKSPDTPAGFPCKKESLVTENDFAYSG 60
           MA KMMVLPLF  FS L +S S ALVQDFCVADLKSPDTP+GFPCKK SLVTE DF YSG
Sbjct: 1   MAKKMMVLPLFFAFSFLAASLSDALVQDFCVADLKSPDTPSGFPCKKASLVTEKDFVYSG 60

Query: 61  LGVAGNTSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPAASEILLVVE 120
           LGVAGNTSN+IKAAVTPAFTAQFPGVNGLGISLARLD+A+GGVIP HTHPA SEILLVVE
Sbjct: 61  LGVAGNTSNLIKAAVTPAFTAQFPGVNGLGISLARLDIAVGGVIPMHTHPAGSEILLVVE 120

Query: 121 GTICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGIALGFVSFSSPNPGLQILD 180
           GTICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGK  ALGFVSFSSPNPGLQILD
Sbjct: 121 GTICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKNTALGFVSFSSPNPGLQILD 180

Query: 181 FALFGNELPTDIIAKTTFLDPVTIKKLKSVLGGSG 215
           FALFGNELPTDI+AKTTFLD VTIKKLK VLGGSG
Sbjct: 181 FALFGNELPTDIVAKTTFLDAVTIKKLKGVLGGSG 215

[Close]

BLAST of Tan0012093 vs. ExPASy TrEMBL
Match: A0A6J1HWK8 (Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111467509 PE=3 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.5e-105
Identity = 199/214 (92.99%), Postives = 203/214 (94.86%), Query Frame = 0


Query: 1   MANKMMVLPLFIVFSVLVSSSHALVQDFCVADLKSPDTPAGFPCKKESLVTENDFAYSGL 60
           MANK MVLPLF VFSVL S SHALVQDFCVADLKSPDTPAGFPCKK SLVTE DF YSGL
Sbjct: 1   MANK-MVLPLFFVFSVLASFSHALVQDFCVADLKSPDTPAGFPCKKVSLVTEKDFVYSGL 60

Query: 61  GVAGNTSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPAASEILLVVEG 120
           GVAGNTSN+IKAAVTPAFTAQFPGVNGLGISLARLDLA+GGVIPFHTHPAASE+LLVVEG
Sbjct: 61  GVAGNTSNLIKAAVTPAFTAQFPGVNGLGISLARLDLAVGGVIPFHTHPAASEVLLVVEG 120

Query: 121 TICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGIALGFVSFSSPNPGLQILDF 180
           TICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKG ALGFVSFSS NPGLQILDF
Sbjct: 121 TICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGGALGFVSFSSANPGLQILDF 180

Query: 181 ALFGNELPTDIIAKTTFLDPVTIKKLKSVLGGSG 215
           ALFGNELPTDI+AKTTFLDP TIKKLK VLGGSG
Sbjct: 181 ALFGNELPTDIVAKTTFLDPATIKKLKGVLGGSG 213

[Close]

BLAST of Tan0012093 vs. ExPASy TrEMBL
Match: A0A6J1EH12 (Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433299 PE=3 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 9.5e-105
Identity = 198/214 (92.52%), Postives = 203/214 (94.86%), Query Frame = 0


Query: 1   MANKMMVLPLFIVFSVLVSSSHALVQDFCVADLKSPDTPAGFPCKKESLVTENDFAYSGL 60
           MA+K MVLPLF VFSVL S SHALVQDFCVADLKSPDTPAGFPCKK SLVTE DF YSGL
Sbjct: 1   MASK-MVLPLFFVFSVLASFSHALVQDFCVADLKSPDTPAGFPCKKVSLVTEKDFVYSGL 60

Query: 61  GVAGNTSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPAASEILLVVEG 120
           GVAGNTSN+IKAAVTPAFTAQFPGVNGLGISLARLDLA+GGVIPFHTHPAASE+LLVVEG
Sbjct: 61  GVAGNTSNLIKAAVTPAFTAQFPGVNGLGISLARLDLAVGGVIPFHTHPAASEVLLVVEG 120

Query: 121 TICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGIALGFVSFSSPNPGLQILDF 180
           TICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKG ALGFVSFSS NPGLQILDF
Sbjct: 121 TICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGGALGFVSFSSANPGLQILDF 180

Query: 181 ALFGNELPTDIIAKTTFLDPVTIKKLKSVLGGSG 215
           ALFGNELPTDI+AKTTFLDP TIKKLK VLGGSG
Sbjct: 181 ALFGNELPTDIVAKTTFLDPATIKKLKGVLGGSG 213

[Close]

BLAST of Tan0012093 vs. ExPASy TrEMBL
Match: A0A5D3CDX0 (Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001630 PE=3 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 5.8e-102
Identity = 193/215 (89.77%), Postives = 199/215 (92.56%), Query Frame = 0


Query: 1   MANKMMVLPLFIVFSVLVSS-SHALVQDFCVADLKSPDTPAGFPCKKESLVTENDFAYSG 60
           MA KMMVLPLF  FS L +S S ALVQDFCVADLKSPDTP+GFPCKK SLVTE DF YSG
Sbjct: 1   MAKKMMVLPLFFAFSFLAASLSDALVQDFCVADLKSPDTPSGFPCKKASLVTEKDFVYSG 60

Query: 61  LGVAGNTSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPAASEILLVVE 120
           LGVAGNTSN+IKAAVTPAFTAQFPGVNGLGISLARLD+A+GGVIP HTHPA SEILLVVE
Sbjct: 61  LGVAGNTSNLIKAAVTPAFTAQFPGVNGLGISLARLDIAVGGVIPMHTHPAGSEILLVVE 120

Query: 121 GTICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGIALGFVSFSSPNPGLQILD 180
           GTICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGK  ALGFVSFSSPNPGLQILD
Sbjct: 121 GTICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKNTALGFVSFSSPNPGLQILD 180

Query: 181 FALFGNELPTDIIAKTTFLDPVTIKKLKSVLGGSG 215
           FALFGNELPTDI+AKTTFLD VTIKKLK VLGGSG
Sbjct: 181 FALFGNELPTDIVAKTTFLDAVTIKKLKGVLGGSG 215

[Close]

BLAST of Tan0012093 vs. ExPASy TrEMBL
Match: A0A1S3BRE3 (Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103492364 PE=3 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 5.8e-102
Identity = 193/215 (89.77%), Postives = 199/215 (92.56%), Query Frame = 0


Query: 1   MANKMMVLPLFIVFSVLVSS-SHALVQDFCVADLKSPDTPAGFPCKKESLVTENDFAYSG 60
           MA KMMVLPLF  FS L +S S ALVQDFCVADLKSPDTP+GFPCKK SLVTE DF YSG
Sbjct: 1   MAKKMMVLPLFFAFSFLAASLSDALVQDFCVADLKSPDTPSGFPCKKASLVTEKDFVYSG 60

Query: 61  LGVAGNTSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPAASEILLVVE 120
           LGVAGNTSN+IKAAVTPAFTAQFPGVNGLGISLARLD+A+GGVIP HTHPA SEILLVVE
Sbjct: 61  LGVAGNTSNLIKAAVTPAFTAQFPGVNGLGISLARLDIAVGGVIPMHTHPAGSEILLVVE 120

Query: 121 GTICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGIALGFVSFSSPNPGLQILD 180
           GTICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGK  ALGFVSFSSPNPGLQILD
Sbjct: 121 GTICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKNTALGFVSFSSPNPGLQILD 180

Query: 181 FALFGNELPTDIIAKTTFLDPVTIKKLKSVLGGSG 215
           FALFGNELPTDI+AKTTFLD VTIKKLK VLGGSG
Sbjct: 181 FALFGNELPTDIVAKTTFLDAVTIKKLKGVLGGSG 215

[Close]

BLAST of Tan0012093 vs. ExPASy TrEMBL
Match: A0A6J1D1N7 (Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111016467 PE=3 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 7.1e-100
Identity = 187/214 (87.38%), Postives = 195/214 (91.12%), Query Frame = 0


Query: 1   MANKMMVLPLFIVFSVLVSSSHALVQDFCVADLKSPDTPAGFPCKKESLVTENDFAYSGL 60
           MA KM +LPL  +FSVL SSS ALVQDFCVADLKS DTP+GFPCKK + VTE DF YSGL
Sbjct: 1   MAKKMAILPLLFIFSVLASSSRALVQDFCVADLKSSDTPSGFPCKKAAFVTEKDFVYSGL 60

Query: 61  GVAGNTSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPAASEILLVVEG 120
           GVAGNTSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPA SEIL+V+EG
Sbjct: 61  GVAGNTSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPAGSEILVVIEG 120

Query: 121 TICAGFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGIALGFVSFSSPNPGLQILDF 180
           TICAGF+SSANTVYFKTLNKGDIMVFPQGLLHFQINSGK  AL FVSFSSPNPGLQILDF
Sbjct: 121 TICAGFISSANTVYFKTLNKGDIMVFPQGLLHFQINSGKSNALAFVSFSSPNPGLQILDF 180

Query: 181 ALFGNELPTDIIAKTTFLDPVTIKKLKSVLGGSG 215
           ALFGNELPTDI+AKTTFLD   IKKLK VLGGSG
Sbjct: 181 ALFGNELPTDIVAKTTFLDIAQIKKLKGVLGGSG 214

[Close]

BLAST of Tan0012093 vs. TAIR 10
Match: AT5G20630.1 (germin 3 )

HSP 1 Score: 290.0 bits (741), Expect = 1.5e-78
Identity = 138/208 (66.35%), Postives = 169/208 (81.25%), Query Frame = 0


Query: 6   MVLPLFIVFSVLVSSSHALVQDFCVADLKSPDTPAGFPCKKESLVTENDFAYSGLGVAGN 65
           M++ +F + S++ + S A VQDFCVAD K P +P+G+ CK    VTENDFA++GLG AGN
Sbjct: 3   MIIQIFFIISLISTISFASVQDFCVADPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGN 62

Query: 66  TSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPAASEILLVVEGTICAG 125
           TSNIIKAAVTPAF   + G+NGLG+SLARLDLA GGVIP HTHP ASE+L+V++GTICAG
Sbjct: 63  TSNIIKAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAG 122

Query: 126 FVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGIALGFVSFSSPNPGLQILDFALFGN 185
           F+SSAN VY KTLN+GD MVFPQGLLHFQ+NSGKG AL FV+F S +PGLQIL FALF N
Sbjct: 123 FISSANKVYLKTLNRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALFAN 182

Query: 186 ELPTDIIAKTTFLDPVTIKKLKSVLGGS 214
           +LP++++  TTFL    +KKLK VLGG+
Sbjct: 183 DLPSELVEATTFLSDAEVKKLKGVLGGT 210

[Close]

BLAST of Tan0012093 vs. TAIR 10
Match: AT1G72610.1 (germin-like protein 1 )

HSP 1 Score: 269.2 bits (687), Expect = 2.8e-72
Identity = 134/208 (64.42%), Postives = 160/208 (76.92%), Query Frame = 0


Query: 7   VLPLFIVFSVLVSSSHALVQDFCVADLKSPDTPAGFPCKKESLVTENDFAYSGLGVAGNT 66
           +L    + S+L + S+A VQDFCVA+LK  +TPAG+PC +   V   DF +SGLG  GNT
Sbjct: 1   MLRTIFLLSLLFALSNASVQDFCVANLKRAETPAGYPCIRPIHVKATDFVFSGLGTPGNT 60

Query: 67  SNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPAASEILLVVEGTICAGF 126
           +NII AAVTPAF AQFPG+NGLG+S ARLDLA  GVIP HTHP ASE+L V+ G+I AGF
Sbjct: 61  TNIINAAVTPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITAGF 120

Query: 127 VSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGIALGFVSFSSPNPGLQILDFALFGNE 186
           VSSAN VY +TL  G +MVFPQGLLHFQIN+GK  A   V+F+S NPGLQILDFALF N 
Sbjct: 121 VSSANAVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAVVTFNSANPGLQILDFALFANS 180

Query: 187 LPTDIIAKTTFLDPVTIKKLKSVLGGSG 215
           LPT+++  TTFLD  T+KKLK VLGG+G
Sbjct: 181 LPTELVVGTTFLDATTVKKLKGVLGGTG 208

[Close]

BLAST of Tan0012093 vs. TAIR 10
Match: AT1G18980.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 3.1e-39
Identity = 91/206 (44.17%), Postives = 132/206 (64.08%), Query Frame = 0


Query: 5   MMVLPLFIVFSVLVSSSHALVQDFCVADLKSPDTPAGFPCKKESLVTENDFAYSGLGVAG 64
           ++V+ +F++ S  +SS    +QDFCV DLK+  +  GFPCK  S V+ +DF +SGLG   
Sbjct: 15  LLVICVFVIPS--LSSDSDPLQDFCVGDLKASPSINGFPCK--SSVSASDFFFSGLGGPL 74

Query: 65  NTSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPAASEILLVVEGTICA 124
           NTS     AV+PA    FPG+N LG+S+  ++ A GGV P H+HP A+E  +V+EG++  
Sbjct: 75  NTSTPNGVAVSPANVLTFPGLNTLGLSMNNVEFAPGGVNPPHSHPRATEAGVVIEGSVFV 134

Query: 125 GFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGIALGFVSFSSPNPGLQILDFALFG 184
           GF+++ NT++ K LN G++ V P+GL+HFQ N GK  A    SF+S  PG  +L   LFG
Sbjct: 135 GFLTTNNTLFSKVLNAGEMFVVPRGLVHFQWNVGKVKARLITSFNSQLPGSAVLPSTLFG 194

Query: 185 NE--LPTDIIAKTTFLDPVTIKKLKS 209
           +   +P  ++ KT   D VT+ KLKS
Sbjct: 195 SNPTIPNAVLTKTFRTDDVTVNKLKS 216

[Close]

BLAST of Tan0012093 vs. TAIR 10
Match: AT1G09560.1 (germin-like protein 5 )

HSP 1 Score: 157.1 bits (396), Expect = 1.5e-38
Identity = 87/206 (42.23%), Postives = 126/206 (61.17%), Query Frame = 0


Query: 5   MMVLPLFIVFSVLVSSSHALVQDFCVADLKSPDTPAGFPCKKESLVTENDFAYSGLGVAG 64
           +++L   + F +  S+   ++QD CVADL S     GFPCK  + VT  DF   GL   G
Sbjct: 8   LLLLLTTVSFFISSSADPDMLQDLCVADLPSGIKINGFPCKDAATVTSADFFSQGLAKPG 67

Query: 65  NTSNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPAASEILLVVEGTICA 124
            T+N   A VT A     PG+N LG+SL+R+D A GG+ P HTHP A+E++ V+EGT+  
Sbjct: 68  LTNNTFGALVTGANVMTIPGLNTLGVSLSRIDYAPGGLNPPHTHPRATEVVFVLEGTLDV 127

Query: 125 GFVSSANTVYFKTLNKGDIMVFPQGLLHFQINSGKGIALGFVSFSSPNPGLQILDFALFG 184
           GF+++AN +  ++L KGD+  FP+GL+HFQ N+G   A    +F+S  PG Q L   LFG
Sbjct: 128 GFLTTANKLISQSLKKGDVFAFPKGLVHFQKNNGDVPASVIAAFNSQLPGTQSLGATLFG 187

Query: 185 N--ELPTDIIAKTTFLDPVTIKKLKS 209
           +   +P +I+A+     P T+K +KS
Sbjct: 188 STPPVPDNILAQAFQTSPGTVKHIKS 213

[Close]

BLAST of Tan0012093 vs. TAIR 10
Match: AT5G38960.1 (RmlC-like cupins superfamily protein )

HSP 1 Score: 156.8 bits (395), Expect = 2.0e-38
Identity = 100/225 (44.44%), Postives = 133/225 (59.11%), Query Frame = 0


Query: 1   MANKMMVLPLFIVFSVL---VSSSHALVQDFCVADLKSPDTPA------GFPCKKESLVT 60
           M N  + +   +  S L   ++S  + +QDFC+      +TPA      G  CK   LVT
Sbjct: 1   MKNLYLAILYLLAASTLPFAIASDPSPLQDFCI----GVNTPANALFVNGKFCKDPKLVT 60

Query: 61  ENDFAYSGLGVAGNT-SNIIKAAVTPAFTAQFPGVNGLGISLARLDLAIGGVIPFHTHPA 120
            +DF +SGL  A  T S+ + + VT     Q PG+N LGISL R+D  I G  P HTHP 
Sbjct: 61  ADDFYFSGLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPR 120

Query: 121 ASEILLVVEGTICAGFVSS--ANTVYFKTLNKGDIMVFPQGLLHFQINSGKGIALGFVSF 180
           A+EILLV EGT+  GF SS   N ++ KTLNKGD+ VFP+GL+HFQ+N GK  A+ F S 
Sbjct: 121 ATEILLVQEGTLFVGFFSSFPENRLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASL 180

Query: 181 SSPNPGLQILDFALFGNELPTD--IIAKTTFLDPVTIKKLKSVLG 212
           SS NPG+ I+   LFG++ P D  ++AK   LDP  I +L+   G
Sbjct: 181 SSQNPGVIIIGNTLFGSKPPIDPNVLAKAFQLDPKVIIQLQKKFG 221

The following BLAST results are available for this feature:

BLAST of Tan0012093 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZRA4	3.6e-85	75.48	Auxin-binding protein ABP19a OS=Prunus persica OX=3760 GN=ABP19A PE=3 SV=1	[more]
O04011	2.0e-83	70.42	Auxin-binding protein ABP20 OS=Prunus persica OX=3760 GN=ABP20 PE=2 SV=1	[more]
O04012	4.9e-82	71.63	Auxin-binding protein ABP19b OS=Prunus persica OX=3760 GN=ABP19B PE=3 SV=1	[more]
L8BRS3	1.1e-78	66.03	Germin-like protein OS=Morus alba OX=3498 PE=1 SV=1	[more]
P94072	2.1e-77	66.35	Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana OX=3702 GN=GER3...	[more]

BLAST of Tan0012093 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022968205.1	5.2e-105	92.99	auxin-binding protein ABP19a-like [Cucurbita maxima]	[more]
XP_023529910.1	1.5e-104	92.52	auxin-binding protein ABP19a-like [Cucurbita pepo subsp. pepo]	[more]
XP_022926078.1	2.0e-104	92.52	auxin-binding protein ABP19a-like [Cucurbita moschata] >KAG6588077.1 Auxin-bindi...	[more]
XP_038879713.1	7.0e-102	90.70	auxin-binding protein ABP19a-like [Benincasa hispida]	[more]
XP_008450917.1	1.2e-101	89.77	PREDICTED: auxin-binding protein ABP19a-like [Cucumis melo] >KAA0055780.1 auxin-...	[more]

BLAST of Tan0012093 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HWK8	2.5e-105	92.99	Germin-like protein OS=Cucurbita maxima OX=3661 GN=LOC111467509 PE=3 SV=1	[more]
A0A6J1EH12	9.5e-105	92.52	Germin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111433299 PE=3 SV=1	[more]
A0A5D3CDX0	5.8e-102	89.77	Germin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G0...	[more]
A0A1S3BRE3	5.8e-102	89.77	Germin-like protein OS=Cucumis melo OX=3656 GN=LOC103492364 PE=3 SV=1	[more]
A0A6J1D1N7	7.1e-100	87.38	Germin-like protein OS=Momordica charantia OX=3673 GN=LOC111016467 PE=3 SV=1	[more]

BLAST of Tan0012093 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20630.1	1.5e-78	66.35	germin 3	[more]
AT1G72610.1	2.8e-72	64.42	germin-like protein 1	[more]
AT1G18980.1	3.1e-39	44.17	RmlC-like cupins superfamily protein	[more]
AT1G09560.1	1.5e-38	42.23	germin-like protein 5	[more]
AT5G38960.1	2.0e-38	44.44	RmlC-like cupins superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 136..156 score: 60.91 coord: 169..184 score: 50.58 coord: 106..126 score: 58.8
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 58..204 e-value: 1.1E-37 score: 141.2
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 60..202 e-value: 4.0E-33 score: 114.1
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 20..213 e-value: 2.7E-67 score: 228.0
None	No IPR available	PANTHER	PTHR31238:SF161	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1	coord: 10..210
None	No IPR available	PANTHER	PTHR31238	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3	coord: 10..210
None	No IPR available	CDD	cd02241	cupin_OxOx	coord: 21..210 e-value: 2.92601E-85 score: 248.665
IPR019780	Germin, manganese binding site	PROSITE	PS00725	GERMIN	coord: 101..114
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 24..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0012093.1	Tan0012093.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0048046	apoplast
molecular_function	GO:0030145	manganese ion binding