Tan0011927 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCACACACCCACTTTCCATCTTCTTCCTTGCCCTTTTCCTCCTCGCCGCCGCCTCCGCCCTCCACTTCGACGATGACAACCAAGCGCCCTGGTTGCAGAGGTGCCGTCAACAGGTTCTCACTTCCCAATTCAAAAACAAATACTTTTCTACTTAATTAATATCTACTATCATCCAATATATAATGCTCCATGCTCTGCTCTGCCTTAACTAATACTCGATCTCCATTGCTTCTCTTTATACATGACCTAATATGACATTTTCCAGTTACCATGCATTGTGTTGTTCAAATGACACAGATTCGGGGCGAACGGCTCCGCCACTGCGAGCAGTTGCTGACAAGGTCCCGCCGCGTCCGGCAGCTACTAGCAGCGGAGGAAGAAGACGCAGTGGAGCACCTGGAGCAGTGCTGCCAGCAGCTGAGGGGGATGGACGACGCGTGCCGGTGCGAGGGGCTGCGACAGATCGTGCAGCGCCGTAGGCAGCAAGGGCGGCTGCAGGGGATCGACGTCGGCCAAATGCTGGAGAGAGCCACCAACTTGCCGTCGGTCTGCAGGCTCAGTCAACGCCGCTGCGAACTCCGCTCCTCGCGGTGGTAG ATGGCCACACACCCACTTTCCATCTTCTTCCTTGCCCTTTTCCTCCTCGCCGCCGCCTCCGCCCTCCACTTCGACGATGACAACCAAGCGCCCTGGTTGCAGAGGTGCCGTCAACAGATTCGGGGCGAACGGCTCCGCCACTGCGAGCAGTTGCTGACAAGGTCCCGCCGCGTCCGGCAGCTACTAGCAGCGGAGGAAGAAGACGCAGTGGAGCACCTGGAGCAGTGCTGCCAGCAGCTGAGGGGGATGGACGACGCGTGCCGGTGCGAGGGGCTGCGACAGATCGTGCAGCGCCGTAGGCAGCAAGGGCGGCTGCAGGGGATCGACGTCGGCCAAATGCTGGAGAGAGCCACCAACTTGCCGTCGGTCTGCAGGCTCAGTCAACGCCGCTGCGAACTCCGCTCCTCGCGGTGGTAG ATGGCCACACACCCACTTTCCATCTTCTTCCTTGCCCTTTTCCTCCTCGCCGCCGCCTCCGCCCTCCACTTCGACGATGACAACCAAGCGCCCTGGTTGCAGAGGTGCCGTCAACAGATTCGGGGCGAACGGCTCCGCCACTGCGAGCAGTTGCTGACAAGGTCCCGCCGCGTCCGGCAGCTACTAGCAGCGGAGGAAGAAGACGCAGTGGAGCACCTGGAGCAGTGCTGCCAGCAGCTGAGGGGGATGGACGACGCGTGCCGGTGCGAGGGGCTGCGACAGATCGTGCAGCGCCGTAGGCAGCAAGGGCGGCTGCAGGGGATCGACGTCGGCCAAATGCTGGAGAGAGCCACCAACTTGCCGTCGGTCTGCAGGCTCAGTCAACGCCGCTGCGAACTCCGCTCCTCGCGGTGGTAG MATHPLSIFFLALFLLAAASALHFDDDNQAPWLQRCRQQIRGERLRHCEQLLTRSRRVRQLLAAEEEDAVEHLEQCCQQLRGMDDACRCEGLRQIVQRRRQQGRLQGIDVGQMLERATNLPSVCRLSQRRCELRSSRW Homology
BLAST of Tan0011927 vs. ExPASy Swiss-Prot
Match: P93198 (2S albumin seed storage protein (Fragment) OS=Juglans regia OX=51240 PE=1 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 1.0e-16 Identity = 47/113 (41.59%), Postives = 73/113 (64.60%), Query Frame = 0
BLAST of Tan0011927 vs. ExPASy Swiss-Prot
Match: P0C8Y8 (2S sulfur-rich seed storage protein 2 OS=Bertholletia excelsa OX=3645 GN=BE2S2 PE=3 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.2e-12 Identity = 42/107 (39.25%), Postives = 66/107 (61.68%), Query Frame = 0
BLAST of Tan0011927 vs. ExPASy Swiss-Prot
Match: P04403 (2S sulfur-rich seed storage protein 1 OS=Bertholletia excelsa OX=3645 GN=BE2S1 PE=1 SV=2) HSP 1 Score: 69.3 bits (168), Expect = 3.8e-11 Identity = 38/114 (33.33%), Postives = 63/114 (55.26%), Query Frame = 0
BLAST of Tan0011927 vs. ExPASy Swiss-Prot
Match: Q39649 (2S albumin OS=Cucurbita maxima OX=3661 PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 3.8e-11 Identity = 41/110 (37.27%), Postives = 66/110 (60.00%), Query Frame = 0
BLAST of Tan0011927 vs. ExPASy Swiss-Prot
Match: P01089 (2S albumin OS=Ricinus communis OX=3988 PE=1 SV=2) HSP 1 Score: 66.6 bits (161), Expect = 2.5e-10 Identity = 38/102 (37.25%), Postives = 58/102 (56.86%), Query Frame = 0
BLAST of Tan0011927 vs. NCBI nr
Match: XP_022942616.1 (2S sulfur-rich seed storage protein 2-like [Cucurbita moschata]) HSP 1 Score: 235.3 bits (599), Expect = 3.1e-58 Identity = 120/139 (86.33%), Postives = 123/139 (88.49%), Query Frame = 0
BLAST of Tan0011927 vs. NCBI nr
Match: KAG6600762.1 (hypothetical protein SDJN03_05995, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 234.6 bits (597), Expect = 5.2e-58 Identity = 119/139 (85.61%), Postives = 123/139 (88.49%), Query Frame = 0
BLAST of Tan0011927 vs. NCBI nr
Match: XP_022984798.1 (2S sulfur-rich seed storage protein 2-like [Cucurbita maxima]) HSP 1 Score: 233.8 bits (595), Expect = 8.9e-58 Identity = 119/139 (85.61%), Postives = 123/139 (88.49%), Query Frame = 0
BLAST of Tan0011927 vs. NCBI nr
Match: XP_008463441.1 (PREDICTED: 2S sulfur-rich seed storage protein 2-like [Cucumis melo]) HSP 1 Score: 210.3 bits (534), Expect = 1.1e-50 Identity = 115/142 (80.99%), Postives = 128/142 (90.14%), Query Frame = 0
BLAST of Tan0011927 vs. NCBI nr
Match: XP_023522829.1 (2S sulfur-rich seed storage protein 2-like, partial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 207.6 bits (527), Expect = 6.8e-50 Identity = 106/125 (84.80%), Postives = 109/125 (87.20%), Query Frame = 0
BLAST of Tan0011927 vs. ExPASy TrEMBL
Match: A0A6J1FPC9 (2S sulfur-rich seed storage protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111447600 PE=3 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 1.5e-58 Identity = 120/139 (86.33%), Postives = 123/139 (88.49%), Query Frame = 0
BLAST of Tan0011927 vs. ExPASy TrEMBL
Match: A0A6J1JBK8 (2S sulfur-rich seed storage protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111482974 PE=3 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 4.3e-58 Identity = 119/139 (85.61%), Postives = 123/139 (88.49%), Query Frame = 0
BLAST of Tan0011927 vs. ExPASy TrEMBL
Match: A0A1S3CJQ3 (2S sulfur-rich seed storage protein 2-like OS=Cucumis melo OX=3656 GN=LOC103501607 PE=3 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 5.1e-51 Identity = 115/142 (80.99%), Postives = 128/142 (90.14%), Query Frame = 0
BLAST of Tan0011927 vs. ExPASy TrEMBL
Match: A0A0A0L7P7 (AAI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G078820 PE=3 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 5.7e-50 Identity = 113/142 (79.58%), Postives = 127/142 (89.44%), Query Frame = 0
BLAST of Tan0011927 vs. ExPASy TrEMBL
Match: A0A2I0JHZ1 (2S albumin-like OS=Punica granatum OX=22663 GN=LOC116213024 PE=3 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 1.3e-17 Identity = 59/140 (42.14%), Postives = 93/140 (66.43%), Query Frame = 0
BLAST of Tan0011927 vs. TAIR 10
Match: AT5G54740.1 (seed storage albumin 5 ) HSP 1 Score: 45.4 bits (106), Expect = 4.2e-05 Identity = 42/154 (27.27%), Postives = 73/154 (47.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|