
Tan0011915 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTCAGTACACTCAGAGAGAGAGAGAGAGACAGAGAAACAGAGAGAGAAAAAGAAAGGGAAAATGGGAAGTGAAGCAAAGCTATGGAAGAACTCAGAAGTACCAAAGCTTCCATTGCTTGCATTTGCAGCAATGGAGTCACCAGATCGCTCTGGAATGCTAACCCCACCAATCCACATTTCAGTTTCAGTCCCATTTCGATGGGAAGAAGAGCCTGGCAAGCCCAGATTCTGTTTCAGAACCCCCAACAATTCATCAACCACTCAAAGAAAGTGCCTTGAACTTCCACCAAGATTGCTGCTCATGGACCCCAAAATCCCAAAACTCCCTCCTCCCATCACTGCACAAAAAGGGATGTTTCAGCTTCATAAGCACTGTTGTGGGTCATTCAGATTTGACAAAAAGCAGCTTGGAGCCATGGTTTTGAGAAAGAGAGGAGTTCTGATAGAGAAAGAGTGGTTTTGTTGGTTGGGAAAAATAAGTTTTGGGAGAAAAAGAGAAGTTGGGTCTGCTTGTAGAAGTGTTTTTCCTTCTTCTTTGGAGAAGGAAAATGAGAGTGACAGTGAAAGTGAGATTGTTGCAGAGAGAAGCAGTTCAAGGATGAAAGTTGCAGAGACACAGAAAGAAAGGAGCTTTTCTTCTTGTCTTGTCCAAGCCAAGACTGAGTTTTGGGTAATTTTAGTACCACCCCTCTTTTTCTCTGTCTTTATAAATATCAACAATCATGACATCTTCAAGTTAAAACTACAGAGACATTTCATTTCTACAGAAAACAGGAGGGGAATACAGGTTTCCTTTCAAGTTTGAGGATATAACTTGTATCTTTCCCTTTTGGTTTTACAAAAGAGAGAACTTCAAAGGAGTGTGTTGTTTTCCAAACAATATATGATTATTAATGAAACTAATACAGTTTAAGGAATTGCAGGGAAGCATAGGAGAAGGATTGAAACAGATCAACATTCCATGGAAGAGCAGAAAAGCATAAGAAAGAGCACTGGTAATCATCAGAATGTTTATGTATAAACCGAGTTTAACTTCTTGTAATGTAAATGTATCAAATAATCATAATAGGGAGGAGGGCAGATGCTTTAGCTAA GTCAGTACACTCAGAGAGAGAGAGAGAGACAGAGAAACAGAGAGAGAAAAAGAAAGGGAAAATGGGAAGTGAAGCAAAGCTATGGAAGAACTCAGAAGTACCAAAGCTTCCATTGCTTGCATTTGCAGCAATGGAGTCACCAGATCGCTCTGGAATGCTAACCCCACCAATCCACATTTCAGTTTCAGTCCCATTTCGATGGGAAGAAGAGCCTGGCAAGCCCAGATTCTGTTTCAGAACCCCCAACAATTCATCAACCACTCAAAGAAAGTGCCTTGAACTTCCACCAAGATTGCTGCTCATGGACCCCAAAATCCCAAAACTCCCTCCTCCCATCACTGCACAAAAAGGGATGTTTCAGCTTCATAAGCACTGTTGTGGGTCATTCAGATTTGACAAAAAGCAGCTTGGAGCCATGGTTTTGAGAAAGAGAGGAGTTCTGATAGAGAAAGAGTGGTTTTGTTGGTTGGGAAAAATAAGTTTTGGGAGAAAAAGAGAAGTTGGGTCTGCTTGTAGAAGTGTTTTTCCTTCTTCTTTGGAGAAGGAAAATGAGAGTGACAGTGAAAGTGAGATTGTTGCAGAGAGAAGCAGTTCAAGGATGAAAGTTGCAGAGACACAGAAAGAAAGGAGCTTTTCTTCTTGTCTTGTCCAAGCCAAGACTGAGTTTTGGGGAAGCATAGGAGAAGGATTGAAACAGATCAACATTCCATGGAAGAGCAGAAAAGCATAAGAAAGAGCACTGGTAATCATCAGAATGTTTATGTATAAACCGAGTTTAACTTCTTGTAATGTAAATGTATCAAATAATCATAATAGGGAGGAGGGCAGATGCTTTAGCTAA ATGGGAAGTGAAGCAAAGCTATGGAAGAACTCAGAAGTACCAAAGCTTCCATTGCTTGCATTTGCAGCAATGGAGTCACCAGATCGCTCTGGAATGCTAACCCCACCAATCCACATTTCAGTTTCAGTCCCATTTCGATGGGAAGAAGAGCCTGGCAAGCCCAGATTCTGTTTCAGAACCCCCAACAATTCATCAACCACTCAAAGAAAGTGCCTTGAACTTCCACCAAGATTGCTGCTCATGGACCCCAAAATCCCAAAACTCCCTCCTCCCATCACTGCACAAAAAGGGATGTTTCAGCTTCATAAGCACTGTTGTGGGTCATTCAGATTTGACAAAAAGCAGCTTGGAGCCATGGTTTTGAGAAAGAGAGGAGTTCTGATAGAGAAAGAGTGGTTTTGTTGGTTGGGAAAAATAAGTTTTGGGAGAAAAAGAGAAGTTGGGTCTGCTTGTAGAAGTGTTTTTCCTTCTTCTTTGGAGAAGGAAAATGAGAGTGACAGTGAAAGTGAGATTGTTGCAGAGAGAAGCAGTTCAAGGATGAAAGTTGCAGAGACACAGAAAGAAAGGAGCTTTTCTTCTTGTCTTGTCCAAGCCAAGACTGAGTTTTGGGGAAGCATAGGAGAAGGATTGAAACAGATCAACATTCCATGGAAGAGCAGAAAAGCATAA MGSEAKLWKNSEVPKLPLLAFAAMESPDRSGMLTPPIHISVSVPFRWEEEPGKPRFCFRTPNNSSTTQRKCLELPPRLLLMDPKIPKLPPPITAQKGMFQLHKHCCGSFRFDKKQLGAMVLRKRGVLIEKEWFCWLGKISFGRKREVGSACRSVFPSSLEKENESDSESEIVAERSSSRMKVAETQKERSFSSCLVQAKTEFWGSIGEGLKQINIPWKSRKA Homology
BLAST of Tan0011915 vs. ExPASy Swiss-Prot
Match: Q9M160 (Uncharacterized protein At4g00950 OS=Arabidopsis thaliana OX=3702 GN=At4g00950 PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 5.0e-13 Identity = 88/285 (30.88%), Postives = 130/285 (45.61%), Query Frame = 0
BLAST of Tan0011915 vs. NCBI nr
Match: XP_022980847.1 (uncharacterized protein At4g00950 [Cucurbita maxima]) HSP 1 Score: 389.0 bits (998), Expect = 2.7e-104 Identity = 191/222 (86.04%), Postives = 201/222 (90.54%), Query Frame = 0
BLAST of Tan0011915 vs. NCBI nr
Match: XP_023527385.1 (uncharacterized protein At4g00950-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 377.9 bits (969), Expect = 6.1e-101 Identity = 187/222 (84.23%), Postives = 198/222 (89.19%), Query Frame = 0
BLAST of Tan0011915 vs. NCBI nr
Match: KAG7019077.1 (Exportin-2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 370.5 bits (950), Expect = 9.8e-99 Identity = 186/222 (83.78%), Postives = 197/222 (88.74%), Query Frame = 0
BLAST of Tan0011915 vs. NCBI nr
Match: XP_022924712.1 (uncharacterized protein At4g00950-like [Cucurbita moschata] >KAG6582679.1 hypothetical protein SDJN03_22681, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 370.5 bits (950), Expect = 9.8e-99 Identity = 186/222 (83.78%), Postives = 197/222 (88.74%), Query Frame = 0
BLAST of Tan0011915 vs. NCBI nr
Match: XP_022147429.1 (uncharacterized protein At4g00950 [Momordica charantia]) HSP 1 Score: 350.5 bits (898), Expect = 1.1e-92 Identity = 178/224 (79.46%), Postives = 193/224 (86.16%), Query Frame = 0
BLAST of Tan0011915 vs. ExPASy TrEMBL
Match: A0A6J1ISE2 (uncharacterized protein At4g00950 OS=Cucurbita maxima OX=3661 GN=LOC111480117 PE=4 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 1.3e-104 Identity = 191/222 (86.04%), Postives = 201/222 (90.54%), Query Frame = 0
BLAST of Tan0011915 vs. ExPASy TrEMBL
Match: A0A6J1E9R6 (uncharacterized protein At4g00950-like OS=Cucurbita moschata OX=3662 GN=LOC111432128 PE=4 SV=1) HSP 1 Score: 370.5 bits (950), Expect = 4.8e-99 Identity = 186/222 (83.78%), Postives = 197/222 (88.74%), Query Frame = 0
BLAST of Tan0011915 vs. ExPASy TrEMBL
Match: A0A6J1D0Z4 (uncharacterized protein At4g00950 OS=Momordica charantia OX=3673 GN=LOC111016356 PE=4 SV=1) HSP 1 Score: 350.5 bits (898), Expect = 5.1e-93 Identity = 178/224 (79.46%), Postives = 193/224 (86.16%), Query Frame = 0
BLAST of Tan0011915 vs. ExPASy TrEMBL
Match: A0A5D3DBI9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00930 PE=4 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 2.5e-84 Identity = 165/224 (73.66%), Postives = 176/224 (78.57%), Query Frame = 0
BLAST of Tan0011915 vs. ExPASy TrEMBL
Match: A0A5A7U0F3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G00950 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 2.1e-83 Identity = 164/224 (73.21%), Postives = 175/224 (78.12%), Query Frame = 0
BLAST of Tan0011915 vs. TAIR 10
Match: AT4G00950.1 (Protein of unknown function (DUF688) ) HSP 1 Score: 76.3 bits (186), Expect = 3.6e-14 Identity = 88/285 (30.88%), Postives = 130/285 (45.61%), Query Frame = 0
BLAST of Tan0011915 vs. TAIR 10
Match: AT5G53030.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 65.1 bits (157), Expect = 8.2e-11 Identity = 61/206 (29.61%), Postives = 92/206 (44.66%), Query Frame = 0
BLAST of Tan0011915 vs. TAIR 10
Match: AT4G27810.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G53030.1); Has 73 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 73; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.2 bits (152), Expect = 3.1e-10 Identity = 39/106 (36.79%), Postives = 50/106 (47.17%), Query Frame = 0
BLAST of Tan0011915 vs. TAIR 10
Match: AT2G46535.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF688) (TAIR:AT3G61840.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 56.6 bits (135), Expect = 2.9e-08 Identity = 61/220 (27.73%), Postives = 90/220 (40.91%), Query Frame = 0
BLAST of Tan0011915 vs. TAIR 10
Match: AT5G53030.2 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF688 (InterPro:IPR007789); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27810.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 55.1 bits (131), Expect = 8.5e-08 Identity = 54/186 (29.03%), Postives = 81/186 (43.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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