Tan0011909 (gene) Snake gourd v1

Overview


Name	Tan0011909
Type	gene
Organism	Trichosanthes anguina (Snake gourd v1)
Description	F-box protein
Location	LG11: 6434783 .. 6436620 (-)
RNA-Seq Expression	Tan0011909
Synteny	Tan0011909

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAGCCCCTATATTTTTTTCTCTCAATTTATTATTTCCAAGCCCTAATTTTTCAGGGGAGGGGAATTTTCCAGTTCTGAAGTGAGAAGTCCTCGGCTCGTCCTCTCTTGCTCTGATCGGCGGTCACTAACCTCTCGCCGCTGATCACCATGCCCCCGGAATCTCTCGGAGATTTCTCGAAACTGGAAATCGAAGAAGCATTGTTAATGGAGAAGCTGGAATGTAAGAGGATTATGAACATGAACATAGATTGGGGGCTTCCATTTCCACGGCATATTGTTCAGGTAATCTTCTCCAAACTTCCTTTCTCCAGTTTTCCTGCCTGCAGACTCGTCTGTAAAACTTGGAATGATCTAGTTTTAGATTACGCTTCATCTTCTAAATTCGTTCATAACTCTTTCCTGTTCTGTACCTCTGATAAGGTCCCCGATTACGGTCCTAGACATTATTATTGCAATCCCAAGATGCATTGTATCGATGTTGATACGATGAGTTTTGTTGGCTCATTTGGATTTGATGGTGATTGGTCCTATATCTCAATTGCCAATTCCTCCAATGGCCTTCTCTTTATTTCCAAAGGTATTTATGGCACTTCTTGTTCTGGCATATTAAATCCTATGAGTAATGAGTTCATCAAACTTCCTGGATCTGTATTAGAAAATATTTACTACTTCGGAAGTGGTTTCAGCCTTAAGACAAAGCGATACAAATTGGCCAGAGTTGACTCTGGCCGAAGAAATTTCAGTTCCATAATGCACATTTTCACATTTGGTAGAAGTGGAACCAACCAATGGAAGCATGTTGACTCCCTGCCATTTGCCGTCTACAATCATGGTGCTTACTTCAATGGAGTCATCTATTGGATTGGAAAAGAAAAAGAAAAGGAAAACAAGTTTGTCATATATGGTCTTGATGTTGAAACTGAGAAGATTGAATTGATTGCAGTCTTGGAAGTTGGCTCCGCCTCCAAGGAGTTTATTCAATCATTTAATGGCACCATTTATGCAATTATTTTCGTATACACTCCTTGTTGTAGGATTCAAAGTGTGGATGATGCAATCGAGACATTCATGGATTAGAAAATTTGTTATTGATGACATACCAAATAATTGGTCCCATCGATACTTTCACCTCATTAAAGCCTTTGAAGAGGGAGAGATATTGGTTCTGGTCAATAATGAGTTTTTTCGCTTGGATAAGACTAGAAGGAAGATCAAGATAAAAACTTTGAATCGAAATGAGAGAGAAGTTACTACAGGGGTTTGTCATATAGAATCTTGAATTTTGGGTTTCTCTCAAACATTTTGGCTGGAGACGATGAACCTTTTTTTAATTTTATTTAAGATGAGAAGATGAATGGTTCATTTACATCAGAACCCACCCCATGGATAGATTGGCCTGCTGACTTATAATTTATAAGTTGTCCTTTGTTTATGAACTTTAAAAGTTGAAGGATCAAACTTATAATTTAATGGTGGTGATGGATTTGCAGGGATCCTCACCAAGTGGGAAAAGCACGAAAATGGTGTCGTGGTGAAGAAGGGTGGAAGAAGTGCTTGGAGATGAATGTATAAGAGCAAGATGTGTGTAAGAGCTGAAGGAGAAGATTAAGAGAAGCTCAGAAGTAGGTGGGAGTTCTTCAAACAATTTTGAGAATTTCATTGAATGGCTTAGAATAAGAGGAAGTTGCTGTAGGAAATGAAGCTTAGCTCAGATTTTGATCTCACATAAAGGGAGCAAATTAAAATTTTCTTCTTCTTAAGTTGAGCATTTATGGTCCATTTGATAAAGTTTCATCTATTCCATTTTTTTAAGAATAAGAAACAAGAGTATGGGTGA

mRNA sequence

CAAGCCCCTATATTTTTTTCTCTCAATTTATTATTTCCAAGCCCTAATTTTTCAGGGGAGGGGAATTTTCCAGTTCTGAAGTGAGAAGTCCTCGGCTCGTCCTCTCTTGCTCTGATCGGCGGTCACTAACCTCTCGCCGCTGATCACCATGCCCCCGGAATCTCTCGGAGATTTCTCGAAACTGGAAATCGAAGAAGCATTGTTAATGGAGAAGCTGGAATGTAAGAGGATTATGAACATGAACATAGATTGGGGGCTTCCATTTCCACGGCATATTGTTCAGGTCCCCGATTACGGTCCTAGACATTATTATTGCAATCCCAAGATGCATTGTATCGATGTTGATACGATGAGTTTTGTTGGCTCATTTGGATTTGATGGTGATTGGTCCTATATCTCAATTGCCAATTCCTCCAATGGCCTTCTCTTTATTTCCAAAGGTATTTATGGCACTTCTTGTTCTGGCATATTAAATCCTATGAGTAATGAGTTCATCAAACTTCCTGGATCTGTATTAGAAAATATTTACTACTTCGGAAGTGGTTTCAGCCTTAAGACAAAGCGATACAAATTGGCCAGAGTTGACTCTGGCCGAAGAAATTTCAGTTCCATAATGCACATTTTCACATTTGGTAGAAGTGGAACCAACCAATGGAAGCATGTTGACTCCCTGCCATTTGCCGTCTACAATCATGGTGCTTACTTCAATGGAGTCATCTATTGGATTGGAAAAGAAAAAGAAAAGGAAAACAAGTTTGTCATATATGGTCTTGATGTTGAAACTGAGAAGATTGAATTGATTGCAGTCTTGGAAGTTGGCTCCGCCTCCAAGGAGTTTATTCAATCATTTAATGGCACCATTTATGCAATTATTTTCGTATACACTCCTTGTTGTAGGATTCAAAGTGTGGATGATGCAATCGAGACATTCATGGATTAGAAAATTTGTTATTGATGACATACCAAATAATTGGTCCCATCGATACTTTCACCTCATTAAAGCCTTTGAAGAGGGAGAGATATTGGTTCTGGTCAATAATGAGTTTTTTCGCTTGGATAAGACTAGAAGGAAGATCAAGATAAAAACTTTGAATCGAAATGAGAGAGAAGTTACTACAGGGGTTTGTCATATAGAATCTTGAATTTTGGGTTTCTCTCAAACATTTTGGCTGGAGACGATGAACCTTTTTTTAATTTTATTTAAGATGAGAAGATGAATGGTTCATTTACATCAGAACCCACCCCATGGATAGATTGGCCTGCTGACTTATAATTTATAAGTTGTCCTTTGTTTATGAACTTTAAAAGTTGAAGGATCAAACTTATAATTTAATGGTGGTGATGGATTTGCAGGGATCCTCACCAAGTGGGAAAAGCACGAAAATGGTGTCGTGGTGAAGAAGGGTGGAAGAAGTGCTTGGAGATGAATGTATAAGAGCAAGATGTGTGTAAGAGCTGAAGGAGAAGATTAAGAGAAGCTCAGAAGTAGGTGGGAGTTCTTCAAACAATTTTGAGAATTTCATTGAATGGCTTAGAATAAGAGGAAGTTGCTGTAGGAAATGAAGCTTAGCTCAGATTTTGATCTCACATAAAGGGAGCAAATTAAAATTTTCTTCTTCTTAAGTTGAGCATTTATGGTCCATTTGATAAAGTTTCATCTATTCCATTTTTTTAAGAATAAGAAACAAGAGTATGGGTGA

Coding sequence (CDS)

ATGCCCCCGGAATCTCTCGGAGATTTCTCGAAACTGGAAATCGAAGAAGCATTGTTAATGGAGAAGCTGGAATGTAAGAGGATTATGAACATGAACATAGATTGGGGGCTTCCATTTCCACGGCATATTGTTCAGGTCCCCGATTACGGTCCTAGACATTATTATTGCAATCCCAAGATGCATTGTATCGATGTTGATACGATGAGTTTTGTTGGCTCATTTGGATTTGATGGTGATTGGTCCTATATCTCAATTGCCAATTCCTCCAATGGCCTTCTCTTTATTTCCAAAGGTATTTATGGCACTTCTTGTTCTGGCATATTAAATCCTATGAGTAATGAGTTCATCAAACTTCCTGGATCTGTATTAGAAAATATTTACTACTTCGGAAGTGGTTTCAGCCTTAAGACAAAGCGATACAAATTGGCCAGAGTTGACTCTGGCCGAAGAAATTTCAGTTCCATAATGCACATTTTCACATTTGGTAGAAGTGGAACCAACCAATGGAAGCATGTTGACTCCCTGCCATTTGCCGTCTACAATCATGGTGCTTACTTCAATGGAGTCATCTATTGGATTGGAAAAGAAAAAGAAAAGGAAAACAAGTTTGTCATATATGGTCTTGATGTTGAAACTGAGAAGATTGAATTGATTGCAGTCTTGGAAGTTGGCTCCGCCTCCAAGGAGTTTATTCAATCATTTAATGGCACCATTTATGCAATTATTTTCGTATACACTCCTTGTTGTAGGATTCAAAGTGTGGATGATGCAATCGAGACATTCATGGATTAG

Protein sequence

MPPESLGDFSKLEIEEALLMEKLECKRIMNMNIDWGLPFPRHIVQVPDYGPRHYYCNPKMHCIDVDTMSFVGSFGFDGDWSYISIANSSNGLLFISKGIYGTSCSGILNPMSNEFIKLPGSVLENIYYFGSGFSLKTKRYKLARVDSGRRNFSSIMHIFTFGRSGTNQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVLEVGSASKEFIQSFNGTIYAIIFVYTPCCRIQSVDDAIETFMD

Homology

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BLAST of Tan0011909 vs. NCBI nr
Match: KAA0039382.1 (F-box protein [Cucumis melo var. makuwa] >TYK00570.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 201.4 bits (511), Expect = 9.3e-48
Identity = 105/207 (50.72%), Postives = 142/207 (68.60%), Query Frame = 0


Query: 45  QVPDYGP--RHYYCNPKMHCIDVDT-MSFVGSFGFDGDWSYISIANSSNGLLFISKGIYG 104
           +V DY P     +CNPK+HC+D+D+  S+V SFGF+GDWSYI+I NS NGLL+I K  + 
Sbjct: 4   EVSDYIPFKSTPWCNPKIHCVDIDSKTSYVASFGFEGDWSYITIVNSCNGLLYICKFTFD 63

Query: 105 TSCSGILNPMSNEFIKLPGSVLE-NIYYFGSGFSLKTKRYKLARVD----SGRRNFSSIM 164
           + C GILNPM+NEF+++P   +E +++  G GFS +TK+YKL R +       +    IM
Sbjct: 64  SLCEGILNPMTNEFMEIPQPEIELDVHSIGFGFSPRTKQYKLFRTEPEVLENLKKCHYIM 123

Query: 165 HIFTFGRSGTNQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIE 224
            IFTF  +G  QW+H + LPF V++HG Y NGVIYWIGK+ EKE + VIY LDV+TE++E
Sbjct: 124 EIFTFD-NGYKQWRHFERLPFVVFHHGQYLNGVIYWIGKKLEKEGEAVIYALDVDTEQME 183

Query: 225 LIAVLEVGSASKE-FIQSFNGTIYAII 243
            IA LE+G   K   I+ F   +YAII
Sbjct: 184 CIATLEIGPFLKNGSIKIFEERVYAII 209

[Close]

BLAST of Tan0011909 vs. NCBI nr
Match: XP_008459707.1 (PREDICTED: F-box protein At3g07870-like [Cucumis melo])

HSP 1 Score: 199.5 bits (506), Expect = 3.6e-47
Identity = 100/195 (51.28%), Postives = 137/195 (70.26%), Query Frame = 0


Query: 55  YCNPKMHCIDVDT-MSFVGSFGFDGDWSYISIANSSNGLLFISKGIYGTSCSGILNPMSN 114
           +CNPK+HC+D+D+  S+V SFGF+GDWSYI+I NS NGLL+I K  + + C GILNPM+N
Sbjct: 83  WCNPKIHCVDIDSKTSYVASFGFEGDWSYITIVNSCNGLLYICKFTFDSLCEGILNPMTN 142

Query: 115 EFIKLPGSVLE-NIYYFGSGFSLKTKRYKLARVD----SGRRNFSSIMHIFTFGRSGTNQ 174
           EF+++P   +E +++  G GFS +TK+YKL R +       +    IM IFTF  +G  Q
Sbjct: 143 EFMEIPQPEIELDVHSIGFGFSPRTKQYKLFRTEPEVLENLKKCHYIMEIFTFD-NGYKQ 202

Query: 175 WKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVLEVGSASK 234
           W+H + LPF V++HG Y NGVIYWIGK+ EKE + VIY LDV+TE++E  A LE+G + K
Sbjct: 203 WRHFERLPFVVFHHGQYLNGVIYWIGKKLEKEGEAVIYALDVDTEQMECTATLEIGPSLK 262

Query: 235 E-FIQSFNGTIYAII 243
              I+ F   +YAII
Sbjct: 263 NGSIKIFEERVYAII 276

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BLAST of Tan0011909 vs. NCBI nr
Match: XP_038879760.1 (uncharacterized protein LOC120071509 [Benincasa hispida])

HSP 1 Score: 184.5 bits (467), Expect = 1.2e-42
Identity = 103/214 (48.13%), Postives = 135/214 (63.08%), Query Frame = 0


Query: 57  NPKMHC-----IDVDT-MSF----VGSFGFDGDWSYISIANSSNGLLFISKGIYGTSCSG 116
           NPKMHC     +DVD+ M F      S  FDGDWS+I    S NGLL ISK  +  SC G
Sbjct: 73  NPKMHCFRLDDLDVDSDMEFEVNKFASLRFDGDWSFILPIRSCNGLLLISKSTFYCSCMG 132

Query: 117 ILNPMSNEFIKLPGSVLE-NIYYFGSGFSLKTKRYKLARVD-SGRRNFSSIMHIFTFGRS 176
           I NPM+NEF ++P    + N Y +G GF   TK YKL R+      ++SS M + TFGR 
Sbjct: 133 IFNPMTNEFFRVPRDNFDANKYVYGFGFIPTTKHYKLFRITIEDEPSYSSRMEVLTFGRG 192

Query: 177 G--------TNQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIE 236
           G         NQW+H+ S+P  +   GAYFNG+IYW+G+EK+++N++VIY LDVE+EKI+
Sbjct: 193 GINPNPKQSQNQWRHLYSIPSDICCKGAYFNGIIYWLGREKDEQNEYVIYTLDVESEKIK 252

Query: 237 LIAVLEVGSAS---KEFIQSFNGTIYAIIFVYTP 248
           L AVL+VG  S   K +IQ FNG++YAI  +  P
Sbjct: 253 LSAVLKVGPFSHYNKVYIQQFNGSVYAIFHILPP 286

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BLAST of Tan0011909 vs. NCBI nr
Match: XP_038890298.1 (F-box protein At3g07870-like [Benincasa hispida])

HSP 1 Score: 180.3 bits (456), Expect = 2.2e-41
Identity = 103/218 (47.25%), Postives = 135/218 (61.93%), Query Frame = 0


Query: 57  NPKMHCIDVDTMSFV-------------GSFGFDGDWSYISIANSSNGLLFISKGIYGTS 116
           N KMHCI  DT   +              S  FDG+W++++I N  +GLL I K    T 
Sbjct: 70  NLKMHCIRFDTTKHLDVDFDLESEWTKSSSLCFDGEWTFMAIMNYCSGLLLICKCANYTR 129

Query: 117 CSGILNPMSNEFIKLPGSVLEN-IYYFGSGFSLKTKRYKLARV-DSGRRN----FSSIMH 176
           C GI NPM+NEF+++P   L+N IYYFG GF+  TK+YKL RV DS  RN      SIM 
Sbjct: 130 CDGIFNPMTNEFLQVPRGQLDNDIYYFGFGFTTTTKQYKLFRVCDSFSRNCEFESGSIMD 189

Query: 177 IFTFGRSGT----NQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETE 236
           + TF RSGT    NQW+++  LP  ++++GAY NG IYWIGKE+EKEN++ IY LDVETE
Sbjct: 190 VLTFSRSGTNANHNQWRYLHYLPLDIHSNGAYLNGFIYWIGKEEEKENEYAIYVLDVETE 249

Query: 237 KIELIAVLEV----GSASKEFIQSFNGTIYAIIFVYTP 248
           KIEL  VLE+     ++    +Q FN ++YAI  +  P
Sbjct: 250 KIELSIVLEICPPLCTSKVGGMQQFNDSVYAIFLINQP 287

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BLAST of Tan0011909 vs. NCBI nr
Match: XP_004141601.1 (F-box protein At3g07870 [Cucumis sativus] >KGN52549.1 hypothetical protein Csa_008830 [Cucumis sativus])

HSP 1 Score: 177.2 bits (448), Expect = 1.9e-40
Identity = 104/204 (50.98%), Postives = 136/204 (66.67%), Query Frame = 0


Query: 56  CNPKMHCIDVDTMSFVGSFGFDGDWSY--ISIANSSNGLLFISKGI-YGTSCSGILNPMS 115
           CN K+HCID+DTMS VGSFGF+ D ++  +SI +S + LL ISK I     C GILNPM+
Sbjct: 5   CNFKIHCIDIDTMSCVGSFGFEDDHNHSTVSIVSSCHALLLISKLIDTDDLCEGILNPMT 64

Query: 116 NEFIKLPGSVL-ENIYYFGSGFSLKTKRYKLARV-DSGRRNFSSIMHIFTFG-RSGT-NQ 175
           NEF++LP     E+  Y+G GF+ KTK+YKL RV +  R  F SIM I  FG RS T  +
Sbjct: 65  NEFLELPDREYDESSPYYGFGFNPKTKQYKLFRVTERDRYEFYSIMEIMRFGDRSETKEE 124

Query: 176 WKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVLEVGSAS- 235
           W+H    P +  +HGAY NGVIYW+GKEK K   +VIY LDVETE++EL+A LEVG  + 
Sbjct: 125 WRHFKCPPISFDDHGAYLNGVIYWMGKEKGK--AYVIYALDVETEQMELVADLEVGPHNF 184

Query: 236 --KEFIQSFNGTIYAIIFVYTPCC 250
               +I + N ++YA + +  PCC
Sbjct: 185 RYNGYIATLNKSVYAYVPIVGPCC 206

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BLAST of Tan0011909 vs. ExPASy TrEMBL
Match: A0A5A7T7C6 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001850 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 4.5e-48
Identity = 105/207 (50.72%), Postives = 142/207 (68.60%), Query Frame = 0


Query: 45  QVPDYGP--RHYYCNPKMHCIDVDT-MSFVGSFGFDGDWSYISIANSSNGLLFISKGIYG 104
           +V DY P     +CNPK+HC+D+D+  S+V SFGF+GDWSYI+I NS NGLL+I K  + 
Sbjct: 4   EVSDYIPFKSTPWCNPKIHCVDIDSKTSYVASFGFEGDWSYITIVNSCNGLLYICKFTFD 63

Query: 105 TSCSGILNPMSNEFIKLPGSVLE-NIYYFGSGFSLKTKRYKLARVD----SGRRNFSSIM 164
           + C GILNPM+NEF+++P   +E +++  G GFS +TK+YKL R +       +    IM
Sbjct: 64  SLCEGILNPMTNEFMEIPQPEIELDVHSIGFGFSPRTKQYKLFRTEPEVLENLKKCHYIM 123

Query: 165 HIFTFGRSGTNQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIE 224
            IFTF  +G  QW+H + LPF V++HG Y NGVIYWIGK+ EKE + VIY LDV+TE++E
Sbjct: 124 EIFTFD-NGYKQWRHFERLPFVVFHHGQYLNGVIYWIGKKLEKEGEAVIYALDVDTEQME 183

Query: 225 LIAVLEVGSASKE-FIQSFNGTIYAII 243
            IA LE+G   K   I+ F   +YAII
Sbjct: 184 CIATLEIGPFLKNGSIKIFEERVYAII 209

[Close]

BLAST of Tan0011909 vs. ExPASy TrEMBL
Match: A0A1S3CB99 (F-box protein At3g07870-like OS=Cucumis melo OX=3656 GN=LOC103498749 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.7e-47
Identity = 100/195 (51.28%), Postives = 137/195 (70.26%), Query Frame = 0


Query: 55  YCNPKMHCIDVDT-MSFVGSFGFDGDWSYISIANSSNGLLFISKGIYGTSCSGILNPMSN 114
           +CNPK+HC+D+D+  S+V SFGF+GDWSYI+I NS NGLL+I K  + + C GILNPM+N
Sbjct: 83  WCNPKIHCVDIDSKTSYVASFGFEGDWSYITIVNSCNGLLYICKFTFDSLCEGILNPMTN 142

Query: 115 EFIKLPGSVLE-NIYYFGSGFSLKTKRYKLARVD----SGRRNFSSIMHIFTFGRSGTNQ 174
           EF+++P   +E +++  G GFS +TK+YKL R +       +    IM IFTF  +G  Q
Sbjct: 143 EFMEIPQPEIELDVHSIGFGFSPRTKQYKLFRTEPEVLENLKKCHYIMEIFTFD-NGYKQ 202

Query: 175 WKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVLEVGSASK 234
           W+H + LPF V++HG Y NGVIYWIGK+ EKE + VIY LDV+TE++E  A LE+G + K
Sbjct: 203 WRHFERLPFVVFHHGQYLNGVIYWIGKKLEKEGEAVIYALDVDTEQMECTATLEIGPSLK 262

Query: 235 E-FIQSFNGTIYAII 243
              I+ F   +YAII
Sbjct: 263 NGSIKIFEERVYAII 276

[Close]

BLAST of Tan0011909 vs. ExPASy TrEMBL
Match: A0A0A0KUJ1 (FBA_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643280 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 9.1e-41
Identity = 104/204 (50.98%), Postives = 136/204 (66.67%), Query Frame = 0


Query: 56  CNPKMHCIDVDTMSFVGSFGFDGDWSY--ISIANSSNGLLFISKGI-YGTSCSGILNPMS 115
           CN K+HCID+DTMS VGSFGF+ D ++  +SI +S + LL ISK I     C GILNPM+
Sbjct: 5   CNFKIHCIDIDTMSCVGSFGFEDDHNHSTVSIVSSCHALLLISKLIDTDDLCEGILNPMT 64

Query: 116 NEFIKLPGSVL-ENIYYFGSGFSLKTKRYKLARV-DSGRRNFSSIMHIFTFG-RSGT-NQ 175
           NEF++LP     E+  Y+G GF+ KTK+YKL RV +  R  F SIM I  FG RS T  +
Sbjct: 65  NEFLELPDREYDESSPYYGFGFNPKTKQYKLFRVTERDRYEFYSIMEIMRFGDRSETKEE 124

Query: 176 WKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKENKFVIYGLDVETEKIELIAVLEVGSAS- 235
           W+H    P +  +HGAY NGVIYW+GKEK K   +VIY LDVETE++EL+A LEVG  + 
Sbjct: 125 WRHFKCPPISFDDHGAYLNGVIYWMGKEKGK--AYVIYALDVETEQMELVADLEVGPHNF 184

Query: 236 --KEFIQSFNGTIYAIIFVYTPCC 250
               +I + N ++YA + +  PCC
Sbjct: 185 RYNGYIATLNKSVYAYVPIVGPCC 206

[Close]

BLAST of Tan0011909 vs. ExPASy TrEMBL
Match: A0A0A0LWG1 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G257290 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 2.7e-40
Identity = 105/236 (44.49%), Postives = 135/236 (57.20%), Query Frame = 0


Query: 43  IVQVPDYGPRHYYCNPKMHCIDVDTMSFVGSFG--------------FDGDWSY-ISIAN 102
           ++   D G  +  CNPKMHCI++DT      F               FDGDW+Y I +A 
Sbjct: 74  LLSTSDRGLNYKLCNPKMHCINLDTRQLSNDFDFDLESEFIKSASLQFDGDWTYTIIMAG 133

Query: 103 SSNGLLFISKGIYGTSCSGILNPMSNEFIKL-PGSVLENIYYFGSGFSLKTKRYKLARV- 162
           S NGL+ ISK    T C GI NPM+NEF+++      ++ Y +G GFS  TK+YKL RV 
Sbjct: 134 SCNGLMLISKCSDYTWCQGIFNPMTNEFLQVSEHGTFDDFYLYGFGFSPITKQYKLFRVF 193

Query: 163 DSG---RRNFSSI-----MHIFTFGRSGT-------NQWKHVDSLPFAVYNHGAYFNGVI 222
           D G   RR  S++     M + TFGRSGT       NQW+ + +LPF +   G Y NG+I
Sbjct: 194 DKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPIHNQWRRLHTLPFEIVADGVYLNGII 253

Query: 223 YWIGKE--KEKENKFVIYGLDVETEKIELIAVLEVGSASKEFIQSFNGTIYAIIFV 245
           YW+ KE  K+KE K+VIY LDVETE IE+  VL+V S     I  FNGTIYA   +
Sbjct: 254 YWLVKEKGKDKEKKYVIYALDVETEHIEMTVVLQVPSNGYGKIHQFNGTIYATFHI 309

[Close]

BLAST of Tan0011909 vs. ExPASy TrEMBL
Match: A0A5D3DMB7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003140 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 6.5e-39
Identity = 103/253 (40.71%), Postives = 145/253 (57.31%), Query Frame = 0


Query: 43  IVQVPDYGPRHYYCNPKMHCIDVDTMSFVG---------------SFGFDGDWSYISIA- 102
           ++   D GP +   NPKM+CI  DT   +                S  FDGDWS+I +  
Sbjct: 68  LLSTSDTGPGNKDLNPKMYCIHFDTTKHLDLDLDFDLELEWTKPPSLSFDGDWSFIPMMD 127

Query: 103 NSSNGLLFISKGIYGTSCSGILNPMSNEFIKLPGSVLE-NIYYFGSGFSLKTKRYKLARV 162
           NS NGL+FI K  + +   GI NPM+NEF+++P   L+ + Y++G GFS  TK+YK+ RV
Sbjct: 128 NSCNGLVFIRKCAFFSRSDGIFNPMTNEFLQVPRHELDGDNYFYGLGFSPTTKQYKMFRV 187

Query: 163 DSGRRNFSSIMHIFTFGRSGT----NQWKHVDSLPFAVYNHGAYFNGVIYWIGKEKEKEN 222
           +    N SSIM+I TF RS T    NQW+ + SLP  +   G Y NG IYW+G+++ KEN
Sbjct: 188 NP--NNNSSIMYILTFRRSETNYKYNQWRQLHSLPILICCDGVYLNGFIYWMGRKQYKEN 247

Query: 223 KFVIYGLDVETEKIELIAVLEVGSASKEFI-----QSFNGTIYAIIFVYTPCC------- 263
           ++ IY L+VETE+IEL AVL +G  S   I     + FNG++YA  ++    C       
Sbjct: 248 EYTIYALNVETEQIELSAVLHLGPFSTSSIPGVSLKQFNGSVYATFYIDPKTCNSVIQVW 307

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BLAST of Tan0011909 vs. TAIR 10
Match: AT2G02660.1 (F-box associated ubiquitination effector family protein )

HSP 1 Score: 42.7 bits (99), Expect = 5.2e-04
Identity = 44/148 (29.73%), Postives = 64/148 (43.24%), Query Frame = 0


Query: 79  DWSYISIANSSNGLLFISKGIYGTSCSGILNPMSNEFIKLPGSVLENIYYFGSGFSLKTK 138
           D  Y SI  +S GL++I    Y  +   I NP +  ++ LP        Y   GF    K
Sbjct: 99  DPRYFSIGYAS-GLIYIYGDRY-VARPLICNPNTGRYVILPNRYTYRKAYSFFGFDPIGK 158

Query: 139 RYKLARV----DSGRRNFSSIMHIFTFGRSGTNQWKHVD-SLPF-AVYNHGAYFNGVIYW 198
           +YK   +    D GR        I T G  G   W+ +   +P   +   G   NGV+Y+
Sbjct: 159 QYKALSIAYPSDPGRHK------ILTLG-DGDLTWRKIKCPVPRPGIKGDGICINGVLYF 218

Query: 199 IGKEKEKENKFVIYGLDVETEKIELIAV 221
           + +  E E+ +VI   DV +EK   I V
Sbjct: 219 LAERNELESDYVIVCFDVRSEKFTYIDV 237

The following BLAST results are available for this feature:

BLAST of Tan0011909 vs.


Match Name	E-value	Identity	Description

BLAST of Tan0011909 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0039382.1	9.3e-48	50.72	F-box protein [Cucumis melo var. makuwa] >TYK00570.1 F-box protein [Cucumis melo...	[more]
XP_008459707.1	3.6e-47	51.28	PREDICTED: F-box protein At3g07870-like [Cucumis melo]	[more]
XP_038879760.1	1.2e-42	48.13	uncharacterized protein LOC120071509 [Benincasa hispida]	[more]
XP_038890298.1	2.2e-41	47.25	F-box protein At3g07870-like [Benincasa hispida]	[more]
XP_004141601.1	1.9e-40	50.98	F-box protein At3g07870 [Cucumis sativus] >KGN52549.1 hypothetical protein Csa_0...	[more]

BLAST of Tan0011909 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T7C6	4.5e-48	50.72	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001850...	[more]
A0A1S3CB99	1.7e-47	51.28	F-box protein At3g07870-like OS=Cucumis melo OX=3656 GN=LOC103498749 PE=4 SV=1	[more]
A0A0A0KUJ1	9.1e-41	50.98	FBA_3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643280 PE=4 ...	[more]
A0A0A0LWG1	2.7e-40	44.49	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G257290 PE=4 ...	[more]
A0A5D3DMB7	6.5e-39	40.71	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003140...	[more]

BLAST of Tan0011909 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02660.1	5.2e-04	29.73	F-box associated ubiquitination effector family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 90..225 e-value: 7.3E-15 score: 52.9
None	No IPR available	PANTHER	PTHR47993:SF20	F-BOX FAMILY PROTEIN	coord: 66..249
None	No IPR available	PANTHER	PTHR47993	OS09G0372900 PROTEIN-RELATED	coord: 66..249
IPR011043	Galactose oxidase/kelch, beta-propeller	SUPERFAMILY	50965	Galactose oxidase, central domain	coord: 61..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Tan0011909.1	Tan0011909.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane