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Tan0011871 (gene) Snake gourd v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSexonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAATGGATCGTTGACTATATGAGGGATTATCGCTTACCAGGAGAAGCAAAGAAGATCATACCTAATCCAAGAAATGCAGCGGTTCAGGAAGAGAAATGGAACCCGCCGAAGGAAGGAAATGTGAAGCTCAACGTAGATGTTGCATGTCATCCTTCTCTTCATCTCACCGGCTTAGGGGCGATTCTCCGAGATTCTTCTGGAAGATTTTTAGGAGCTCAATCGGTGATCGTTCAGGGACGCCACGACCCCTTCTCCGCAGAAGCTATGGCCATGCTGAAAGGTATGGAGCTGGCAGTCCAAATGGGGTTCAACAAACTATGGATTGAATCAGATTTCCAAGTCTTGGTTAGGGGCATCCACGACCATTCTCACAGACTTTCTCCTCAAGGTCCAATTCTGGAGGACATACGCAACTGTATGATCACAAACAAATTCGCAGGGCTTAGTTTTAGTCCTAGATCCACTAACAAGGTAGCCCACAACCTCGCTCATTGGGCTTTTTCATCACAAGAGTCTTGTAATTGGTTACACGATGAGCCCGAGTGGCTCCATCATCTTATTTTGGCTGACACTGATTTGGTTAGGCCTTTTATTTCTTAA ATGGCAGAATGGATCGTTGACTATATGAGGGATTATCGCTTACCAGGAGAAGCAAAGAAGATCATACCTAATCCAAGAAATGCAGCGGTTCAGGAAGAGAAATGGAACCCGCCGAAGGAAGGAAATGTGAAGCTCAACGTAGATGTTGCATGTCATCCTTCTCTTCATCTCACCGGCTTAGGGGCGATTCTCCGAGATTCTTCTGGAAGATTTTTAGGAGCTCAATCGGTGATCGTTCAGGGACGCCACGACCCCTTCTCCGCAGAAGCTATGGCCATGCTGAAAGGTATGGAGCTGGCAGTCCAAATGGGGTTCAACAAACTATGGATTGAATCAGATTTCCAAGTCTTGGTTAGGGGCATCCACGACCATTCTCACAGACTTTCTCCTCAAGGTCCAATTCTGGAGGACATACGCAACTGTATGATCACAAACAAATTCGCAGGGCTTAGTTTTAGTCCTAGATCCACTAACAAGGTAGCCCACAACCTCGCTCATTGGGCTTTTTCATCACAAGAGTCTTGTAATTGGTTACACGATGAGCCCGAGTGGCTCCATCATCTTATTTTGGCTGACACTGATTTGGTTAGGCCTTTTATTTCTTAA ATGGCAGAATGGATCGTTGACTATATGAGGGATTATCGCTTACCAGGAGAAGCAAAGAAGATCATACCTAATCCAAGAAATGCAGCGGTTCAGGAAGAGAAATGGAACCCGCCGAAGGAAGGAAATGTGAAGCTCAACGTAGATGTTGCATGTCATCCTTCTCTTCATCTCACCGGCTTAGGGGCGATTCTCCGAGATTCTTCTGGAAGATTTTTAGGAGCTCAATCGGTGATCGTTCAGGGACGCCACGACCCCTTCTCCGCAGAAGCTATGGCCATGCTGAAAGGTATGGAGCTGGCAGTCCAAATGGGGTTCAACAAACTATGGATTGAATCAGATTTCCAAGTCTTGGTTAGGGGCATCCACGACCATTCTCACAGACTTTCTCCTCAAGGTCCAATTCTGGAGGACATACGCAACTGTATGATCACAAACAAATTCGCAGGGCTTAGTTTTAGTCCTAGATCCACTAACAAGGTAGCCCACAACCTCGCTCATTGGGCTTTTTCATCACAAGAGTCTTGTAATTGGTTACACGATGAGCCCGAGTGGCTCCATCATCTTATTTTGGCTGACACTGATTTGGTTAGGCCTTTTATTTCTTAA MAEWIVDYMRDYRLPGEAKKIIPNPRNAAVQEEKWNPPKEGNVKLNVDVACHPSLHLTGLGAILRDSSGRFLGAQSVIVQGRHDPFSAEAMAMLKGMELAVQMGFNKLWIESDFQVLVRGIHDHSHRLSPQGPILEDIRNCMITNKFAGLSFSPRSTNKVAHNLAHWAFSSQESCNWLHDEPEWLHHLILADTDLVRPFIS Homology
BLAST of Tan0011871 vs. NCBI nr
Match: XP_038704726.1 (uncharacterized protein LOC120000672 [Tripterygium wilfordii]) HSP 1 Score: 121.3 bits (303), Expect = 9.4e-24 Identity = 63/186 (33.87%), Postives = 101/186 (54.30%), Query Frame = 0
BLAST of Tan0011871 vs. NCBI nr
Match: XP_021824838.1 (uncharacterized protein LOC110765903 [Prunus avium]) HSP 1 Score: 106.7 bits (265), Expect = 2.4e-19 Identity = 55/160 (34.38%), Postives = 87/160 (54.37%), Query Frame = 0
BLAST of Tan0011871 vs. NCBI nr
Match: XP_023893303.1 (uncharacterized protein LOC112005292 [Quercus suber]) HSP 1 Score: 105.9 bits (263), Expect = 4.1e-19 Identity = 59/162 (36.42%), Postives = 89/162 (54.94%), Query Frame = 0
BLAST of Tan0011871 vs. NCBI nr
Match: XP_021809818.1 (uncharacterized protein LOC110753261 [Prunus avium]) HSP 1 Score: 104.0 bits (258), Expect = 1.6e-18 Identity = 58/178 (32.58%), Postives = 89/178 (50.00%), Query Frame = 0
BLAST of Tan0011871 vs. NCBI nr
Match: XP_021807757.1 (uncharacterized protein LOC110751579 [Prunus avium]) HSP 1 Score: 100.9 bits (250), Expect = 1.3e-17 Identity = 58/162 (35.80%), Postives = 85/162 (52.47%), Query Frame = 0
BLAST of Tan0011871 vs. ExPASy TrEMBL
Match: A0A6P5TBX9 (uncharacterized protein LOC110765903 OS=Prunus avium OX=42229 GN=LOC110765903 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 1.2e-19 Identity = 55/160 (34.38%), Postives = 87/160 (54.37%), Query Frame = 0
BLAST of Tan0011871 vs. ExPASy TrEMBL
Match: A0A6P5S7Q3 (uncharacterized protein LOC110753261 OS=Prunus avium OX=42229 GN=LOC110753261 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 7.5e-19 Identity = 58/178 (32.58%), Postives = 89/178 (50.00%), Query Frame = 0
BLAST of Tan0011871 vs. ExPASy TrEMBL
Match: M5VP36 (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa014760mg PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 1.7e-18 Identity = 61/189 (32.28%), Postives = 93/189 (49.21%), Query Frame = 0
BLAST of Tan0011871 vs. ExPASy TrEMBL
Match: A0A803P6S3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 2.9e-18 Identity = 61/194 (31.44%), Postives = 87/194 (44.85%), Query Frame = 0
BLAST of Tan0011871 vs. ExPASy TrEMBL
Match: A0A6P5RZ31 (uncharacterized protein LOC110751579 OS=Prunus avium OX=42229 GN=LOC110751579 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 6.4e-18 Identity = 58/162 (35.80%), Postives = 85/162 (52.47%), Query Frame = 0
BLAST of Tan0011871 vs. TAIR 10
Match: AT5G65005.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 61.6 bits (148), Expect = 8.2e-10 Identity = 50/184 (27.17%), Postives = 78/184 (42.39%), Query Frame = 0
BLAST of Tan0011871 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 57.0 bits (136), Expect = 2.0e-08 Identity = 52/182 (28.57%), Postives = 80/182 (43.96%), Query Frame = 0
BLAST of Tan0011871 vs. TAIR 10
Match: AT1G52990.1 (thioredoxin family protein ) HSP 1 Score: 50.1 bits (118), Expect = 2.5e-06 Identity = 39/150 (26.00%), Postives = 69/150 (46.00%), Query Frame = 0
BLAST of Tan0011871 vs. TAIR 10
Match: AT4G03292.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 49.7 bits (117), Expect = 3.2e-06 Identity = 41/152 (26.97%), Postives = 64/152 (42.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Snake gourd (anguina) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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